Metagenome / Metatranscriptome Family F086817

Basic Information
Family ID	F086817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	94 residues
Representative Sequence	MSQELHARAERLIAQERVEGISAADQQWLRQHLAECASCVARAAATEQAIRSLRGLRVALPPTLASRTQFRVRLRAEQLRSEPRWRMVWAACGVSWA
Number of Associated Samples	67
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.27 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (58.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (46.364 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.182 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08281	Sigma70_r4_2	91.82
PF02737	3HCDH_N	4.55
PF00072	Response_reg	0.91
PF07927	HicA_toxin	0.91
PF00725	3HCDH	0.91
PF04542	Sigma70_r2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	5.45
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	4.55
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	4.55
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.55
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.55
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	4.55
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	4.55
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.91
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.91
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.91
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001089\|JGI12683J13190_1000407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5872	Open in IMG/M
3300001545\|JGI12630J15595_10006582	Not Available	2524	Open in IMG/M
3300001661\|JGI12053J15887_10256879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	867	Open in IMG/M
3300002245\|JGIcombinedJ26739_100673967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	912	Open in IMG/M
3300002245\|JGIcombinedJ26739_100755114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	852	Open in IMG/M
3300002245\|JGIcombinedJ26739_100771664	Not Available	841	Open in IMG/M
3300002245\|JGIcombinedJ26739_101411029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	590	Open in IMG/M
3300002907\|JGI25613J43889_10005734	Not Available	3382	Open in IMG/M
3300002914\|JGI25617J43924_10075250	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300002914\|JGI25617J43924_10273865	Not Available	576	Open in IMG/M
3300004479\|Ga0062595_101514083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	619	Open in IMG/M
3300005437\|Ga0070710_10766925	Not Available	686	Open in IMG/M
3300005542\|Ga0070732_10512204	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005575\|Ga0066702_10524414	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300005587\|Ga0066654_10778770	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300005764\|Ga0066903_105591849	Not Available	662	Open in IMG/M
3300006804\|Ga0079221_10424329	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300007255\|Ga0099791_10511760	Not Available	583	Open in IMG/M
3300007255\|Ga0099791_10533945	Not Available	571	Open in IMG/M
3300007788\|Ga0099795_10467229	Not Available	583	Open in IMG/M
3300007788\|Ga0099795_10554368	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300009038\|Ga0099829_10735038	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009038\|Ga0099829_11093410	Not Available	661	Open in IMG/M
3300009088\|Ga0099830_10643532	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300009088\|Ga0099830_10669999	Not Available	853	Open in IMG/M
3300009088\|Ga0099830_10708512	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300009088\|Ga0099830_11126832	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300009088\|Ga0099830_11345470	Not Available	594	Open in IMG/M
3300009088\|Ga0099830_11366847	Not Available	589	Open in IMG/M
3300009089\|Ga0099828_10285678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300009089\|Ga0099828_10563584	Not Available	1026	Open in IMG/M
3300009143\|Ga0099792_10444189	Not Available	802	Open in IMG/M
3300009143\|Ga0099792_10620681	Not Available	691	Open in IMG/M
3300010159\|Ga0099796_10495594	Not Available	547	Open in IMG/M
3300010862\|Ga0126348_1058512	Not Available	649	Open in IMG/M
3300011269\|Ga0137392_10651027	All Organisms → cellular organisms → Bacteria → Acidobacteria	873	Open in IMG/M
3300011269\|Ga0137392_10908141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	725	Open in IMG/M
3300011269\|Ga0137392_11044587	Not Available	671	Open in IMG/M
3300011269\|Ga0137392_11160229	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M
3300011270\|Ga0137391_10635919	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300011271\|Ga0137393_10205265	All Organisms → cellular organisms → Bacteria → Acidobacteria	1664	Open in IMG/M
3300011271\|Ga0137393_10458563	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300011271\|Ga0137393_10631390	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300011271\|Ga0137393_11654682	Not Available	529	Open in IMG/M
3300012096\|Ga0137389_10149960	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300012189\|Ga0137388_11768853	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300012202\|Ga0137363_11442988	Not Available	579	Open in IMG/M
3300012202\|Ga0137363_11583485	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300012205\|Ga0137362_10799285	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300012361\|Ga0137360_10340698	Not Available	1253	Open in IMG/M
3300012363\|Ga0137390_11293107	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300012363\|Ga0137390_11335291	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300012363\|Ga0137390_11981876	Not Available	508	Open in IMG/M
3300012582\|Ga0137358_10023928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3955	Open in IMG/M
3300012923\|Ga0137359_10237599	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M
3300012923\|Ga0137359_10314306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1394	Open in IMG/M
3300012923\|Ga0137359_10350823	All Organisms → cellular organisms → Bacteria → Acidobacteria	1312	Open in IMG/M
3300012927\|Ga0137416_10520345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300012927\|Ga0137416_11519401	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300015264\|Ga0137403_10106437	All Organisms → cellular organisms → Bacteria → Acidobacteria	2809	Open in IMG/M
3300018433\|Ga0066667_10277553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300020579\|Ga0210407_10676049	Not Available	802	Open in IMG/M
3300020579\|Ga0210407_11034167	Not Available	625	Open in IMG/M
3300021046\|Ga0215015_10895133	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300021088\|Ga0210404_10770330	Not Available	549	Open in IMG/M
3300021168\|Ga0210406_10239311	Not Available	1493	Open in IMG/M
3300021168\|Ga0210406_10440742	Not Available	1038	Open in IMG/M
3300021168\|Ga0210406_10742676	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300021170\|Ga0210400_10402981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300021170\|Ga0210400_11057965	Not Available	658	Open in IMG/M
3300021171\|Ga0210405_10621210	Not Available	840	Open in IMG/M
3300021178\|Ga0210408_10888176	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300021178\|Ga0210408_11429980	Not Available	520	Open in IMG/M
3300021180\|Ga0210396_10818765	Not Available	798	Open in IMG/M
3300021479\|Ga0210410_10090777	Not Available	2691	Open in IMG/M
3300021559\|Ga0210409_10113604	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300024178\|Ga0247694_1011969	Not Available	1016	Open in IMG/M
3300024330\|Ga0137417_1431656	All Organisms → cellular organisms → Bacteria → Acidobacteria	1485	Open in IMG/M
3300024347\|Ga0179591_1211551	All Organisms → cellular organisms → Bacteria → Acidobacteria	2996	Open in IMG/M
3300025898\|Ga0207692_10612093	Not Available	701	Open in IMG/M
3300026498\|Ga0257156_1119973	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300027629\|Ga0209422_1135054	Not Available	559	Open in IMG/M
3300027633\|Ga0208988_1010739	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300027660\|Ga0209736_1019786	All Organisms → cellular organisms → Bacteria → Acidobacteria	2070	Open in IMG/M
3300027671\|Ga0209588_1090864	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300027671\|Ga0209588_1283011	Not Available	501	Open in IMG/M
3300027846\|Ga0209180_10363563	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300027846\|Ga0209180_10447160	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300027862\|Ga0209701_10267631	Not Available	993	Open in IMG/M
3300027875\|Ga0209283_10767227	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027903\|Ga0209488_10460741	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300031715\|Ga0307476_10561794	Not Available	846	Open in IMG/M
3300031718\|Ga0307474_10108291	All Organisms → cellular organisms → Bacteria → Acidobacteria	2081	Open in IMG/M
3300031720\|Ga0307469_10093454	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300031720\|Ga0307469_12054028	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300031754\|Ga0307475_10141394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1906	Open in IMG/M
3300031754\|Ga0307475_11073117	Not Available	631	Open in IMG/M
3300031820\|Ga0307473_10047363	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300031823\|Ga0307478_10102800	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300031954\|Ga0306926_12617790	Not Available	550	Open in IMG/M
3300031962\|Ga0307479_10038299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4595	Open in IMG/M
3300031962\|Ga0307479_10230580	Not Available	1826	Open in IMG/M
3300031962\|Ga0307479_10382350	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300031962\|Ga0307479_10433225	Not Available	1299	Open in IMG/M
3300031962\|Ga0307479_10537739	Not Available	1151	Open in IMG/M
3300031962\|Ga0307479_10969586	Not Available	820	Open in IMG/M
3300031962\|Ga0307479_11010327	Not Available	801	Open in IMG/M
3300031962\|Ga0307479_11063274	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300032180\|Ga0307471_102866153	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300032180\|Ga0307471_103990795	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.18%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	46.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12683J13190_10004071	3300001089	Forest Soil	MSQEFHVRAERLIAQERVEGISTADQRWLRQHLVECASCAARADATEQAIRSLRGLSVALPPALASRTQFRVRMRAQQLRGE
JGI12630J15595_100065821	3300001545	Forest Soil	MSQDHARAERLIAQERVEGLSAADQQWLRQHLSECAGCAARAGATEQAIRSLRGLSIALPPALASRTQFRVRIRAEQLRSEPRWRAVWAACGISWAFG
JGI12053J15887_102568791	3300001661	Forest Soil	MSREVHARAKQLIAQERVEGISAADQHWLGQHLVECASCAARSGATEQAIRSLRGSSVALPPTLGLRTQFRVRMRAQQLRAEPRWRMV
JGIcombinedJ26739_1006739672	3300002245	Forest Soil	MSQDTHARAEQLIAQERIEGISAADQYWLRQHLVECTSCAARAGSIEEALRSLRGLSIALPPALASRTQFRVRIRAEQL
JGIcombinedJ26739_1007551142	3300002245	Forest Soil	MSQEFHARAERLIAQERVEGISTADELWLRRHLAECSNCAARASATEQAIRSLRGLSVSLPPTLASRTQFRVRMRAQ
JGIcombinedJ26739_1007716641	3300002245	Forest Soil	MSQELHARAERLIAQERVEGISAADQQWLRQHLADCASCAGRASATEQAIRSLRALSVAIPPA
JGIcombinedJ26739_1014110292	3300002245	Forest Soil	MSREVHARAEQLIAQGRVEGISAADQQWLRQHLADCANCAARSGATEQAIRSLRGLSVALPPALASRTQFRVRMRAQQLRSEPRWRMVWAACGISWAFGA
JGI25613J43889_100057341	3300002907	Grasslands Soil	MSQEFHARAERLIAQGRVEGISTADQQWLRRHLAECASCAARASATEEAIRSL
JGI25617J43924_100752501	3300002914	Grasslands Soil	MSAELHARAERLIAQERVEGLPAADQQWLRHHLAECARCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVWAACGISW
JGI25617J43924_102738651	3300002914	Grasslands Soil	MSQELHARAERLMAQERVEGISTADQLWLRQHLADCASCAAHANATEQAIRSLRGWSVAM
Ga0062595_1015140831	3300004479	Soil	MSQEFHARAERLIAQERVEGISAADQHWLRQHLSACASCLAHAAATERTIQSLRGFSIALPPTLAARTQFRVRL
Ga0070710_107669251	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSQELHTRAERLIAQERVEGISAVDQQWLRQHLSECASCMAHLAATERAIRSLRGFNVSLPPTLAARTQFRVRLRAEQLRREPRWRMVWAA
Ga0070732_105122042	3300005542	Surface Soil	MSQELHARAEQLIAQERVEGISTADQLWLQRHLAECASCAARAGATEQALRSLRGLSVALPPALASRTQFRVHLRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHRMGVPNFIWE
Ga0066702_105244142	3300005575	Soil	MNQEMHAQAERLIAQERVEGISTADQRWLREHLAGCTDCAARAAAIEHALRSLRGVSVPFPKTLASRTQFRVRLRAQQLRGEPRWRLVWAACGVSWAFGAVTAPYVWHALEWAGHR
Ga0066654_107787702	3300005587	Soil	MSGDDSMTNTELHSRAERLIAQERIEGISANQQAWLREHLVGCPQCGAHAAATEQAIRSLRGMSVDMPKTLASRTQFRVRMRARQLRGEPRWRLVWGACGFSWAFGAATAPYVWRGLEWVGHRMGLPNLVWEFGF
Ga0066903_1055918491	3300005764	Tropical Forest Soil	MSEEIHARAKRLITQQRVEDISADEREWLELHLGECATCSELASATEQAIRSLRGLSVPLPRALASRTQMRVRLRAQQLQVYEPHWRMVWAACGISWAFGA
Ga0079221_104243291	3300006804	Agricultural Soil	MSQELHTRAERLIAQERVEGISAVDQQWLRQHLSECASCMAHLAATERAIRSLRGFNVSLPPTLAARTQFRVRLRAEQLRREPRWRMVWAACGVSWAFGAATAPYVWRGLEWLGHRLGVPNMVWE
Ga0099791_105117602	3300007255	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPAADQHWLRHHLAECARCAEHASATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQELREREP
Ga0099791_105339452	3300007255	Vadose Zone Soil	MRQELHARAEQLIAQERVEGISTADQRWLQRHLTDCASCAARASATEQTIRSLRGLSVVLPPTLASRTQFR
Ga0099795_104672291	3300007788	Vadose Zone Soil	MNQEQHARAEQLIAQERVEGISPADHHWLRAHLSECASCASRAAATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRW
Ga0099795_105543682	3300007788	Vadose Zone Soil	MNQELHARAEELIAQERVEGISPADQHWLRQHLAECASCASRAAATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQ*
Ga0099829_107350381	3300009038	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISITDQRWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRMRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHRMG
Ga0099829_110934102	3300009038	Vadose Zone Soil	MSTELHARAERLIAQERVEGLPAADQQWLRQHLAECSPCAEHAGAMEQAIRALRGISVPLPKTLATSTQFRVRLRAQQLRGEPRWR
Ga0099830_106435321	3300009088	Vadose Zone Soil	MSAELHARAERLIAQERVEGLPAADQQWLRQHLAECVSCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGISWVFGAATAPYVWRGLEWVGHRMGLPNIIWE
Ga0099830_106699992	3300009088	Vadose Zone Soil	MSAELHARAERLIAQERVEGLPAADQQWLRHHLAECARCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQ
Ga0099830_107085122	3300009088	Vadose Zone Soil	MNPEMHARAEQLIAQERIEGITPADQHWLRAHLSECASCASHAHATEQALRSLRGLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMAWAACGVSWAFGAATAPYVWRGLEWAGHRMGVP
Ga0099830_111268322	3300009088	Vadose Zone Soil	MSAELHARAGRLIAQERVEGLPVADQQWLRQHLAECPRCTEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAEQLRAEPRWRMVWAACGIS
Ga0099830_113454702	3300009088	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPATDQQWLRHHLAECARCAEHTSVTEQAIRALRGVSVPLPKTLASRTQFRVRL
Ga0099830_113668471	3300009088	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISSADQLWLQQHLAECGSCAARAGATEGAIRSLRGLSVALPPALASRTQFRVRLRAQQLR
Ga0099828_102856781	3300009089	Vadose Zone Soil	MSAELHARAERLIAQERVEGLPAADQQWLRHHLAECARCAEHAGATEQAIRALRGVSVLGGMSLASRTQFRVRLRVQQLRGEPRWRMVWAACGISW
Ga0099828_105635841	3300009089	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISSADQLWLQQHLAECGSCAARAGATEGAIRSLRGLSVALPPALASRTQFR
Ga0099792_104441892	3300009143	Vadose Zone Soil	MSQELHTRAEQLIAQERIEGIPPADQHWLRQHLAECASCASRAAATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGVSWAFG
Ga0099792_106206811	3300009143	Vadose Zone Soil	MSQELHTRAEQLIAQERVEGIPPADQHWLRQHLAECASCASHAAATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLR
Ga0099796_104955941	3300010159	Vadose Zone Soil	MNKELHARAEDLIAQERVEGISTADELWLRQHLADCASCAARAGATEQAIRSLRGISVSLPKTLANRTQFRVRMRAQQ
Ga0126348_10585122	3300010862	Boreal Forest Soil	MSQESHARAEQLIAQERVEGISSADQRWLQQHLAECAHCAARAGATEQTIRSLRGLSVALPPALASRTQFRVRMRAQQLRGEPRWRMV*
Ga0137392_106510271	3300011269	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPATDQQWLRHHLAECARCAEHASATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGISWVFGAA
Ga0137392_109081411	3300011269	Vadose Zone Soil	MSQELHARAEQLIAQQRVEGISTADQRWLQQHLAECTSCAARAGATEQAIRSLRGLSVA
Ga0137392_110445871	3300011269	Vadose Zone Soil	MSQELHARAEQLIAQERVEGISTVDQRWLQQHLVECAKCAARAGATEQAIRSLRGLSVAVPPALASRTQFRVRVRAQQLRTEPRWRLVWAACGVSWAFGAVTAPYVWRGLEWAGH
Ga0137392_111602291	3300011269	Vadose Zone Soil	MSQEFHARAERLIAQGRVEGISTADQQWLRRHLAECASCAARASATEEAIRSLRGLSVSLPPTLASRTQFRVRMRAQQLRGEPRWRMVWVACGISWAFGAATAPYVWRGLEWAGHR
Ga0137391_106359191	3300011270	Vadose Zone Soil	MSAELHARAERLIAQERVEGLPAADQQWLRQHLAECVSCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGLSWVFGAATAPYVWR
Ga0137393_102052653	3300011271	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPAADQHWLRQHLAECSRCAERAGAMEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTA
Ga0137393_104585632	3300011271	Vadose Zone Soil	MSKELHVRAEQLIAQERIEGISAADQQWLRQHLAECAHCAELAGTTEQAIRSLRGIGVALPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGI
Ga0137393_106313902	3300011271	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISSADQLWLQQHLAECGSCAARAGATEGAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGVSWAFGAATAPYVWRGLEWAGHRMGMP
Ga0137393_116546821	3300011271	Vadose Zone Soil	MSQELHARAERLIAQERVEGISTGDQRWLQQHLSECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVR
Ga0137389_101499601	3300012096	Vadose Zone Soil	MNQELHARAEQLIAQERIEGISAADQQWLRQHLAECAHCAELAGTTEQAIRSLRGISIALPKTLASRTQFRVRLHAQQLRGEPRWRMVW
Ga0137388_117688532	3300012189	Vadose Zone Soil	MSRELHARAERLIAQERVEGISTADQLWLRQHLADCAGCAAHANATEQAIRSLRGWSVAMPPALASRTQFRVRLRAQQLRSEPRWRMVWAACGISWAFGAAT
Ga0137363_114429882	3300012202	Vadose Zone Soil	MNQELHGRAEQLIAQERVEGISMADQVWLRQHLADCASCAARAGATEQAIRSLLGLSVALPPALASRTQFRVRL
Ga0137363_115834852	3300012202	Vadose Zone Soil	MNQDLHARAEQLIAQERVEGIPTADQHWLRQHLSECASCASRAAATEQALRSLRGLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGISWAFGAAT
Ga0137362_107992851	3300012205	Vadose Zone Soil	MNQELHGRAEQLIAQERVEGISMADQVWLRQHLADCASCAARAGATEQAIRSLHGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVW
Ga0137360_103406981	3300012361	Vadose Zone Soil	MSQELHARAERLITQERVEGISSNDQLWLQRHLAECASCAARASASEQAIRSLRGLSVALPPALASRTQFRV
Ga0137390_112931072	3300012363	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISSADQLWLQQHLAECGSCAARAGATEGAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGVSWAFGAATAPYVWRGL
Ga0137390_113352912	3300012363	Vadose Zone Soil	MSAELHARAGRLIAQERVEGLPVADQQWLRQHLAECPRCTEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGISWVFGA
Ga0137390_119818761	3300012363	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPATDQQWLRHHLAECARCAEHASATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRSEPRWRMV
Ga0137358_100239281	3300012582	Vadose Zone Soil	MSQELHARAERLIAQERVEGISTADQHWLRQHLSECASCLASASATEQAIRSLRGLSVALPPALASRTQFRVRIRAEQLRSEPRWRMVWAACGLSWAFGAATAPYVWRGLEWVGHRLGVPNIIWELG
Ga0137359_102375991	3300012923	Vadose Zone Soil	MSQDMHTRAEQLIAQERVEGIPTADQHWLRQHLSECASCASRAAATEQALRSLRGLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGISWAFGAATAPYVWRGLE
Ga0137359_103143063	3300012923	Vadose Zone Soil	MSQELHARAERLIAQERVEGISTADQHWLRQHLSECASCLASASATEQAIRSLRGLSVALPPALASRTQFRVRIRAEQL
Ga0137359_103508231	3300012923	Vadose Zone Soil	MSQELHARAERLIAQERVEGISAADQQWLRQHLAECASCVARAAATEQAIRSLRGLRVALPPTLASRTQFRVRLRAEQLRSEPRWRMVWAACGVSWA
Ga0137416_105203451	3300012927	Vadose Zone Soil	MSQEMHVRAEQLIAQQRVEGISTADQRWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGVSWA
Ga0137416_115194011	3300012927	Vadose Zone Soil	MSQELHARAEQLIAQERVEGISTADQRWLQQHLVECAKCAARAGATEQAIRSLRGLSVAVPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGVSWAFGAATAPYVWRGLEWAGHRMGMPNIIWEL
Ga0137403_101064371	3300015264	Vadose Zone Soil	MNQDLHTRAEQLIAQERVEGIPPVDQHWLRQHLAECPSCSSRATATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWTACGISWAFGAATAPYVWRGLEW
Ga0066667_102775532	3300018433	Grasslands Soil	MSEELHARAERLLAQERVEGISASEQEWLRRHLGECAACTARADATEEAIRALRGLSASMPRTLASRTQMRVRLRARQL
Ga0210407_106760492	3300020579	Soil	MSQEMHARAEQLIAQERVEGISTADQLWLLRHLAECASCAARAGATEQAIRSLRGLSVALPPTLASRTQFRVRLRAQQLRG
Ga0210407_110341671	3300020579	Soil	MSQELHARAEQLITQERIEGISTADQLWLQRHMAECASCAARAGATEQTLRSLRGLGVALPPALASRTQFRVRLRAQQLRGE
Ga0215015_108951331	3300021046	Soil	MSAELHARAERLIAQERVEGPPAADQQWLRQHLAECSRCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVYTACGISWAFGAATAPYVWRGLEWVGHRTGLP
Ga0210404_107703301	3300021088	Soil	MSQEFHARAERLIAQERVEGISTTDQQWLRQHLADCPSCSARASATEQAIRSLRGWSVAMPRG
Ga0210406_102393113	3300021168	Soil	MSQEFHARAERLIAQERVEGISTADQQWLRRHLAECANCAARANATEQAIHALRGVSVPFPKSLASRTQFRVRMRAQQLRGEPRWRMVWAACGISWAFGAATAPYV
Ga0210406_104407422	3300021168	Soil	MSQELHARADQLIAQERVEGISTADQQWLRQHLAECASCAARAGTTEQAIRSLRGLSVAVPPALASRTQFRVRLRA
Ga0210406_107426762	3300021168	Soil	MSQELHARAEQLIAQERVEGTSTADHLWLQRHLAECASCSARAGATEQAIRSLRGLSVALPPSLASRTQFRVRLRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRG
Ga0210400_104029812	3300021170	Soil	MNGELHERAERLIAQERVERISPAEREWLDAHLQECAPCAELAQATEQALRSLRGLSVPLPRALASRTQFRVRLRAQELQAREPRWRLLWVACGASWA
Ga0210400_110579652	3300021170	Soil	LSQELHARAERLIAQERVEGISTADEQWLRRHLADCANCVARAAATEQAIRSLRGLSISLPPTLASRTQFRVRLRAEQLRSE
Ga0210405_106212102	3300021171	Soil	MSQEMHARAEQLIAQERVEGISTADQLWLLRHLAECASCAARAGATEQAIRSLRGLSVALPPSLA
Ga0210408_108881761	3300021178	Soil	MSQELHARAEQLITQERVEGISTADQLWLQRHLAECTSCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHRLGVP
Ga0210408_114299802	3300021178	Soil	MNQELHARAEHLIAQERVEGISLADQHWLRQHLAECASCSARATATEQALRSLRGLSVPLPKTLASRTQFRVRMRAQQLRGEPRW
Ga0210396_108187651	3300021180	Soil	MSQEVHARAEQLLAQERIEGISPADQQWLRQHLSDCAACAARASATEQAIRSLRGLSIALPPSLASRTQFRVRIRAEQLRSEPRWRMIWTACG
Ga0210410_100907775	3300021479	Soil	MSQELHARAERLIAQERVEGISTADQQWLRQHLSECASCVARAAATEQAIRSLRGLSVSLPPALASRTQFRVRLRAEQLRSEPRW
Ga0210409_101136041	3300021559	Soil	MSKDVHARAGRLIAQERVEGIAPAERQWLEQHLQECKRCAAQGRLTEEAVRALRSVAVPLPRALASRAQMRVRLRAQELREREPRLRLIWVVCGLSWALGIASAPYVWRAFAWV
Ga0247694_10119692	3300024178	Soil	MSQEFHARAERLIAQERVEGISAADQHWLRQHLSACASCLAHAAATERTIQSLRGFSIALPPTLAARTQFRVRLRAE
Ga0137417_14316562	3300024330	Vadose Zone Soil	MNQELHTRAEQLIAQERVEGISPADQHWLRQHLSECPSCSARATATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGISWAFGAATAPYVWRGLEWAGHRMGLPNIIWSSALDFGGRYPPRSSQSS
Ga0179591_12115511	3300024347	Vadose Zone Soil	MNQELHTRAEQLIAQERVEGISPADQHWLRKHLSECPSCSARATATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGVSWAFGAATAPYVWRGLEWAGHRMGLP
Ga0207692_106120931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSQELHTRAERLIAQERVEGISAVDQQWLRQHLSECASCMAHLAATERAIRSLRGFNVSLPPTLAARTQFRVRLRAEQLRREPRWRMVWASCGAS
Ga0257156_11199732	3300026498	Soil	MSQEFHARAERLIAQGRVEGISTADQQWLRRHLAECASCAARASATEEAIRSLRGLSVSLPPTLASRTQFRVRMRAQQLRGEPRWRMVWVACGISWAFGAATAPYVWRG
Ga0209422_11350542	3300027629	Forest Soil	MSQEKHVRAEQLMAQERIEGISAADQQWLRQHLSDCVACAARASATELAIRSLRGLSIALPPALASRTQFRVRIRAEQLRSEPRWRMIWTACGVSWAFGAATAPY
Ga0208988_10107391	3300027633	Forest Soil	MSREVHARAKQLIAQERVEGISAADQHWLGQHLVECASCAARSGATEQAIRSLRGSSVALPPTLGLRTQFRVRMRAQQLRAEPRWRMVWAACGISWAFGAATAPYVWRGLEWAGHRMGVP
Ga0209736_10197861	3300027660	Forest Soil	MSCEFHERAERLIAQERVEGVSPAEREWLDGHLQECAPCAELAGETEQALRSLRGLSVPLPRALASRT
Ga0209588_10908642	3300027671	Vadose Zone Soil	MSQEMHVRAEQLIAQQRVEGISTADQRWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGVS
Ga0209588_12830111	3300027671	Vadose Zone Soil	MSKELHTRAEQLVAQERIEGISAADQQWLRRHLAECEECSTLAGATEQAI
Ga0209180_103635631	3300027846	Vadose Zone Soil	MSQELHARAERLIAQERVEGISTGDQRWLQQHLSECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGFSWAFGAAT
Ga0209180_104471602	3300027846	Vadose Zone Soil	MSQELHARAEQLIAQERIEGISITDQRWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRMRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHRM
Ga0209701_102676312	3300027862	Vadose Zone Soil	MSEQLHARAERLIAQERVEGLPATDQQWLRHHLAECARCAEHTSVTEQAIRALRGVSVPLPKTLASRTQ
Ga0209283_107672271	3300027875	Vadose Zone Soil	MSAELHARAERLIAQERVEGLPAADQQWLRHHLAECARCAEHAGATEQAIRALRGVSVPLPKTLASRTQFRVRLRAQQLRGEPRWRMVWAACGISWAFGAATAPYVWR
Ga0209488_104607412	3300027903	Vadose Zone Soil	MNQELHARAEQLIAQERVEGISPADQHWLRQHLAECASCASRAAATEQALRSLRSLSVPFPKTLASRTQFRVRLRAQQLRAEPRWRMVWAACGVSWAFGAATAPYVWRGLEWAGHRMGLP
Ga0307476_105617941	3300031715	Hardwood Forest Soil	MSQETHAQAEQLIARECVEGISVADQRWLRQHLAECAACAARASATEQAIRSLRNLSVPLPPALASRTQFRVRIRAAQLRGGPRWRMVWAACGISWAFGAATAPYVWRGLEWAG
Ga0307474_101082914	3300031718	Hardwood Forest Soil	MSQATHAQAEQLIARERVEGISAADQQWLWQHLAECAACAARASATEQAIRSLRNLSVPLPPALASRTQFRVRLRAAQLRGGPRWRMVWAACGISWAFGAATAPYVWR
Ga0307469_100934541	3300031720	Hardwood Forest Soil	MSVDVHARAGQLIAQERVEEISAAERSWLEQHLAECERCAEQARATEEAIRTLRGVAIPLPRTLASRAQMRVRLRAEQLQEYEPRWRMMWTACGISWAFGAVTAPYVWRGLEWVGHRMGMPKIIWELGF
Ga0307469_120540282	3300031720	Hardwood Forest Soil	MSKELHARAEQLIAQERIEGIATADQRWLRQHLSECADCAARAGATEQAIRTLRGLSVPLPPGLASRTQFRVRLRAQQLRTEPHWRMVYAACGISWAFGA
Ga0307475_101413944	3300031754	Hardwood Forest Soil	MSQELHARAEQLVAQERVEGISTADRIWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRMRAQQLRGEPR
Ga0307475_110731171	3300031754	Hardwood Forest Soil	MNQEMHARAEQLIAQERIEGISLPDQHWLRQHLAECASCSARATATEQALRSLRGLSVPLPKTLASRTQFRVRMRAQQLRSEPRWRMVWAACGISWAFGAATAPYVWR
Ga0307473_100473631	3300031820	Hardwood Forest Soil	MSQELHTRAEQLIAQERVEGISSSDQRWLQQHLAKCTTCAARAGATEQAIRSLRGLSVSLPAALASRTQFRVRMRAQQLRGEPRWRMVYAACGISWAFGAATAPYVWRGLEWVG
Ga0307478_101028004	3300031823	Hardwood Forest Soil	MSQDLHARAKQLLAQERIEGISAADQQWLRQHLFECAACAAQASAAEQAIRSLRGL
Ga0306926_126177901	3300031954	Soil	MSEEIHARAKRLIAQQCVEDISAEEREWLEQHLRECAMCSEFASATAQAIRSLRGLSVPLPRALARRTQMRVRLRAQQLQVYEPHWRMVWAACGISWAFGATTAPYVWRGLEWVGQR
Ga0307479_100382998	3300031962	Hardwood Forest Soil	MSQDLHARAKQLLAQERIEGISAADQQWLRQHLFECAACAAQASAAEQAIRSLRGLSIA
Ga0307479_102305803	3300031962	Hardwood Forest Soil	MSQELHARAEQLIAQERVEGISTADQLWLQQHLAECASCAARAGATEQAIRSLRGWSVALPP
Ga0307479_103823501	3300031962	Hardwood Forest Soil	MNQEMHARAEHLIAQERVEGISLADQHWLRQHLAECASCSARATATEQALRSLRGLSVPL
Ga0307479_104332253	3300031962	Hardwood Forest Soil	MSRELHARAEQLIAQERIEGISSSDQRWLQRHLAECANCAARAGATEQTIRSLRGLSVALPAALASRTQFRVRMRAQQLRGEPRWRLVWA
Ga0307479_105377391	3300031962	Hardwood Forest Soil	MSQELHARAEQLIAQERIEGISTADQQWLQQHLAECVNCAARAGATEQAIRSLRGLSVALPAALASRTQFRVRMRAQQLRGEPRWRLVWA
Ga0307479_109695861	3300031962	Hardwood Forest Soil	MNQELHARAEQLIAQERVEGISTADQIWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRMR
Ga0307479_110103272	3300031962	Hardwood Forest Soil	MSQETHAQAEQLIARECVEGISAADQRWLRQHLAECAACAARAGATEQAIRSLRNLSVPLPPALASRTQFRVRIRAA
Ga0307479_110632742	3300031962	Hardwood Forest Soil	MSQELHARAEQLIAQERVEGISTTDQLWLQQHLAECASCAARAGATEQAIRSLRGLSVALPPALASRTQFRVRLRAQQLRGEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHLMGVPNF
Ga0307471_1028661532	3300032180	Hardwood Forest Soil	MSQELHARADQLIAQERVEGISTADQQWLRQHLAECASCAARAGTTEQAIRSLRGLSVAVPPTLASRTQFRVRLRAQQLRSEPRWRLVWAACGISWAFGAATAPYVWRGLEWAGHRMGVPNIIWE
Ga0307471_1039907951	3300032180	Hardwood Forest Soil	MSQEMHARAEQLIAQERVEGISTADQLWLLRHLAECASCAARAGATEQAIRSLRGLSVALPPTLASRTQFRVRLRAQQLRGEPRWRLVWVACGISWAFGAATAPYVWHGLEWAGHRMG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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