NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F086888

Metagenome / Metatranscriptome Family F086888

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086888
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 46 residues
Representative Sequence MQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKVSQRRWSK
Number of Associated Samples 89
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.57 %
% of genes near scaffold ends (potentially truncated) 52.73 %
% of genes from short scaffolds (< 2000 bps) 73.64 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.273 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(44.545 % of family members)
Environment Ontology (ENVO) Unclassified
(45.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.273 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.52%    β-sheet: 0.00%    Coil/Unstructured: 46.48%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF04986Y2_Tnp 22.73
PF14319Zn_Tnp_IS91 6.36
PF00069Pkinase 4.55
PF13495Phage_int_SAM_4 4.55
PF04185Phosphoesterase 2.73
PF02371Transposase_20 1.82
PF13466STAS_2 1.82
PF00111Fer2 1.82
PF03449GreA_GreB_N 0.91
PF13426PAS_9 0.91
PF01569PAP2 0.91
PF00856SET 0.91
PF13620CarboxypepD_reg 0.91
PF03544TonB_C 0.91
PF02311AraC_binding 0.91
PF08327AHSA1 0.91
PF00589Phage_integrase 0.91
PF13744HTH_37 0.91
PF10503Esterase_PHB 0.91
PF05988DUF899 0.91
PF01638HxlR 0.91
PF01695IstB_IS21 0.91
PF01272GreA_GreB 0.91
PF13650Asp_protease_2 0.91
PF16285DUF4931 0.91
PF04079SMC_ScpB 0.91
PF07077DUF1345 0.91
PF02517Rce1-like 0.91
PF07719TPR_2 0.91
PF14329DUF4386 0.91
PF12161HsdM_N 0.91
PF13424TPR_12 0.91
PF12704MacB_PCD 0.91
PF08241Methyltransf_11 0.91
PF07883Cupin_2 0.91
PF07677A2M_recep 0.91
PF12833HTH_18 0.91
PF00561Abhydrolase_1 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 18.18
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 2.73
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 1.82
COG3547TransposaseMobilome: prophages, transposons [X] 1.82
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.91
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.91
COG1386Chromosome segregation and condensation protein ScpBTranscription [K] 0.91
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.91
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.91
COG4291Uncharacterized membrane proteinFunction unknown [S] 0.91
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.91
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.27 %
UnclassifiedrootN/A2.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10111139All Organisms → cellular organisms → Bacteria → Acidobacteria1153Open in IMG/M
3300001471|JGI12712J15308_10009194All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2690Open in IMG/M
3300001593|JGI12635J15846_10122040All Organisms → cellular organisms → Bacteria → Acidobacteria1839Open in IMG/M
3300001661|JGI12053J15887_10046557All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2431Open in IMG/M
3300002911|JGI25390J43892_10006659All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2619Open in IMG/M
3300003370|JGI26337J50220_1003119All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300004091|Ga0062387_101058395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300004092|Ga0062389_101119418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium973Open in IMG/M
3300005172|Ga0066683_10540980All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium711Open in IMG/M
3300005180|Ga0066685_10503274Not Available839Open in IMG/M
3300005445|Ga0070708_101638773All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300005450|Ga0066682_10055921All Organisms → cellular organisms → Bacteria2404Open in IMG/M
3300005450|Ga0066682_10122385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1646Open in IMG/M
3300005558|Ga0066698_10040827All Organisms → cellular organisms → Bacteria2882Open in IMG/M
3300005569|Ga0066705_10361195All Organisms → cellular organisms → Bacteria → Proteobacteria914Open in IMG/M
3300005591|Ga0070761_10398169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium840Open in IMG/M
3300005921|Ga0070766_10088347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1816Open in IMG/M
3300005921|Ga0070766_11026611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300006796|Ga0066665_10567879All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium919Open in IMG/M
3300006797|Ga0066659_10962224All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium714Open in IMG/M
3300006854|Ga0075425_100707909All Organisms → cellular organisms → Bacteria → Acidobacteria1156Open in IMG/M
3300006893|Ga0073928_10003159All Organisms → cellular organisms → Bacteria26450Open in IMG/M
3300006893|Ga0073928_10428427All Organisms → cellular organisms → Bacteria → Acidobacteria962Open in IMG/M
3300006893|Ga0073928_10484596All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300007819|Ga0104322_134345All Organisms → cellular organisms → Bacteria1753Open in IMG/M
3300009038|Ga0099829_10050230All Organisms → cellular organisms → Bacteria → Acidobacteria3088Open in IMG/M
3300009038|Ga0099829_10090564All Organisms → cellular organisms → Bacteria → Acidobacteria2361Open in IMG/M
3300009038|Ga0099829_11380474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300009089|Ga0099828_10299137All Organisms → cellular organisms → Bacteria → Proteobacteria1447Open in IMG/M
3300009089|Ga0099828_11425476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300009520|Ga0116214_1161686All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium836Open in IMG/M
3300009700|Ga0116217_10115120All Organisms → cellular organisms → Bacteria1825Open in IMG/M
3300010379|Ga0136449_104312951All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300010860|Ga0126351_1200667All Organisms → cellular organisms → Bacteria → Acidobacteria1111Open in IMG/M
3300011270|Ga0137391_10098299All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2534Open in IMG/M
3300012096|Ga0137389_10004879All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia8523Open in IMG/M
3300012096|Ga0137389_10388785All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1190Open in IMG/M
3300012189|Ga0137388_10005116All Organisms → cellular organisms → Bacteria8719Open in IMG/M
3300012202|Ga0137363_10144523All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1862Open in IMG/M
3300012202|Ga0137363_10698479All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300012203|Ga0137399_10998053All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300012205|Ga0137362_10186932All Organisms → cellular organisms → Bacteria → Proteobacteria1781Open in IMG/M
3300012205|Ga0137362_11656396All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300012206|Ga0137380_10435270All Organisms → cellular organisms → Bacteria → Acidobacteria1161Open in IMG/M
3300012349|Ga0137387_10547058All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius840Open in IMG/M
3300012349|Ga0137387_10829855All Organisms → cellular organisms → Bacteria → Acidobacteria669Open in IMG/M
3300012356|Ga0137371_10530920All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae907Open in IMG/M
3300012362|Ga0137361_10208095All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1771Open in IMG/M
3300012582|Ga0137358_10310915All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1069Open in IMG/M
3300012582|Ga0137358_10329910All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1034Open in IMG/M
3300012683|Ga0137398_10098811All Organisms → cellular organisms → Bacteria → Acidobacteria1832Open in IMG/M
3300012685|Ga0137397_10624121All Organisms → cellular organisms → Bacteria → Acidobacteria802Open in IMG/M
3300012917|Ga0137395_10680030All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300012918|Ga0137396_10166439All Organisms → cellular organisms → Bacteria1611Open in IMG/M
3300012922|Ga0137394_10074122All Organisms → cellular organisms → Bacteria2840Open in IMG/M
3300012922|Ga0137394_10830879All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300012923|Ga0137359_10506791Not Available1064Open in IMG/M
3300012925|Ga0137419_10325595All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1182Open in IMG/M
3300012925|Ga0137419_11017042All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300012927|Ga0137416_10590027All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium967Open in IMG/M
3300012929|Ga0137404_10541463All Organisms → cellular organisms → Bacteria → Acidobacteria1042Open in IMG/M
3300012929|Ga0137404_10867303All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300012929|Ga0137404_11940156All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012930|Ga0137407_11777503All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300015053|Ga0137405_1350816All Organisms → cellular organisms → Bacteria → Acidobacteria1984Open in IMG/M
3300015241|Ga0137418_10800434All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300015242|Ga0137412_10038583All Organisms → cellular organisms → Bacteria3901Open in IMG/M
3300015245|Ga0137409_10050878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3935Open in IMG/M
3300015245|Ga0137409_10270702All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300015264|Ga0137403_10014903All Organisms → cellular organisms → Bacteria8457Open in IMG/M
3300015264|Ga0137403_10143945All Organisms → cellular organisms → Bacteria2354Open in IMG/M
3300018006|Ga0187804_10387868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300018431|Ga0066655_10255380All Organisms → cellular organisms → Bacteria → Acidobacteria1121Open in IMG/M
3300019887|Ga0193729_1198915All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300020140|Ga0179590_1064787All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300020583|Ga0210401_11013760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300021088|Ga0210404_10796481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300021403|Ga0210397_10521308All Organisms → cellular organisms → Bacteria → Acidobacteria902Open in IMG/M
3300021420|Ga0210394_10707914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans882Open in IMG/M
3300021476|Ga0187846_10002584All Organisms → cellular organisms → Bacteria → Acidobacteria9822Open in IMG/M
3300022557|Ga0212123_10002687All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia40867Open in IMG/M
3300022557|Ga0212123_10305283All Organisms → cellular organisms → Bacteria → Acidobacteria1110Open in IMG/M
3300025898|Ga0207692_10583792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300026310|Ga0209239_1012202All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4509Open in IMG/M
3300026360|Ga0257173_1033512All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300026369|Ga0257152_1030577All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300026532|Ga0209160_1033427All Organisms → cellular organisms → Bacteria → Acidobacteria3206Open in IMG/M
3300026557|Ga0179587_10093846All Organisms → cellular organisms → Bacteria → Acidobacteria1805Open in IMG/M
3300027050|Ga0209325_1011300All Organisms → cellular organisms → Bacteria → Acidobacteria1004Open in IMG/M
3300027603|Ga0209331_1006278All Organisms → cellular organisms → Bacteria → Acidobacteria3212Open in IMG/M
3300027604|Ga0208324_1143626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300027635|Ga0209625_1059709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium851Open in IMG/M
3300027681|Ga0208991_1066994All Organisms → cellular organisms → Bacteria → Acidobacteria1082Open in IMG/M
3300027684|Ga0209626_1007107All Organisms → cellular organisms → Bacteria → Acidobacteria2528Open in IMG/M
3300027727|Ga0209328_10017722All Organisms → cellular organisms → Bacteria → Proteobacteria2166Open in IMG/M
3300027737|Ga0209038_10050120All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300027767|Ga0209655_10010130All Organisms → cellular organisms → Bacteria3194Open in IMG/M
3300027846|Ga0209180_10659289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300027862|Ga0209701_10392535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300027889|Ga0209380_10478251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300027903|Ga0209488_10033317All Organisms → cellular organisms → Bacteria3758Open in IMG/M
3300027908|Ga0209006_10833305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300028047|Ga0209526_10342540All Organisms → cellular organisms → Bacteria → Acidobacteria1003Open in IMG/M
3300028536|Ga0137415_10143581All Organisms → cellular organisms → Bacteria2225Open in IMG/M
3300028536|Ga0137415_10412583All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1155Open in IMG/M
3300030707|Ga0310038_10132485All Organisms → cellular organisms → Bacteria → Acidobacteria1261Open in IMG/M
3300031708|Ga0310686_109680673All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1417Open in IMG/M
3300031708|Ga0310686_110991312All Organisms → cellular organisms → Bacteria → Proteobacteria2936Open in IMG/M
3300031962|Ga0307479_10006496All Organisms → cellular organisms → Bacteria10740Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil44.55%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.18%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.45%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.45%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring4.55%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.91%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.91%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300003370Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026369Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-AEnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1011113913300000567Peatlands SoilVIAADAGLMQIQSWEGAVLRRAETVLQDTRHDTLGTEMGHGEKVSRRLWS*
JGI12712J15308_1000919433300001471Forest SoilMQIELWEGAALSGVETVPQGTTLDTVRAEIDYSEKVSQ*
JGI12635J15846_1012204023300001593Forest SoilMQIQWCEGAVLSRAETVLQGTTHDTVRAEIEYGEKVS
JGI12053J15887_1004655733300001661Forest SoilVVAVDAGAMQIQSWEGAALSDAETVLQGTTHDSVRAEIGYGEKVSQRFRWKKGSV*
JGI25390J43892_1000665913300002911Grasslands SoilVVAVDAGPMQIQWWEGAALSRAEIVLQGTRHNTVRAEIDYGEKVSQ*
JGI26337J50220_100311923300003370Bog Forest SoilVVAVDAGAMQIQWWEGAALRRAETVLQGTTQDTVRAEIGYGE*
Ga0062387_10105839523300004091Bog Forest SoilVVAVDAGSMQIESWEGAALSRGETVLQGTTHDTLGAGIGHGEKVSRRLWL
Ga0062389_10111941813300004092Bog Forest SoilVVAVDAGPMRIQWWEGAALNRAETVLQRTTQDTVRAEIGCGEKGPQRRWSKML
Ga0066683_1054098023300005172SoilVDAGAMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGGKVS*
Ga0066685_1050327423300005180SoilDAGPMQIQSWEGAVVSRAETVLQGTTHDTVSAEIGFGVNSG*
Ga0070708_10163877323300005445Corn, Switchgrass And Miscanthus RhizosphereIQWWEGAALSRAETVLQGTTHDNVRAEIGYGEKVSQRLWLK*
Ga0066682_1005592163300005450SoilVVAVDAGPMQIQWWEGAALSGFETVLQGTTQDTVRTEIGYGKKVSQRLWSKKLEE
Ga0066682_1012238513300005450SoilVIAVDAGPMQIQSWEGAGLSRVETVLLGTTHERVHAEVGYGEKVS*
Ga0066698_1004082743300005558SoilMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGGKVS*
Ga0066705_1036119533300005569SoilMQIQWWEGAALSGFETVLQGTTQDTVRTEIGYGKKVSQRLWSKKLEE
Ga0070761_1039816923300005591SoilMWPPVVAVDAGPMQIQWCEGAELSRAETVLQGTTHDTLGTEMGHSEKVS*
Ga0070766_1008834743300005921SoilMQIQWWEGAALSDAETVLQGTTQDTVRAEIGYGEKVSQGCSRRS*
Ga0070766_1102661123300005921SoilVVAVDADLMQIQSWEGAALSRAEIVLQGTRHDTVRAEIDYG*
Ga0066665_1056787933300006796SoilMQIQWWEGAAVRHAETVLQGTTHDTVRAEIGYGEKVSQRLWSKKVE
Ga0066659_1096222423300006797SoilMWPPVVAVDAGAMQIQSCEGAVLSRAETVLQGTTHDTVHAEIGYGKKVSRRLWLKKLEEEIGDGEA*
Ga0075425_10070790923300006854Populus RhizosphereVGAVDAGPMQIQWGEGVALSRVETVLQGTTHDTVHAEVGYGEKVS*
Ga0073928_10003159243300006893Iron-Sulfur Acid SpringVVAVDAGPMQIQLWEGAVLRCAETVPQGTTRDTVRAEIDYGEKVSQ*
Ga0073928_1042842723300006893Iron-Sulfur Acid SpringVVAVDAGSMQIQSWEGGALSCAETVLQGTIHGTVCAEIGYGEKVS*
Ga0073928_1048459623300006893Iron-Sulfur Acid SpringVVAVDAGPMQIQLWEGAALSRAETVPQGATHDTVRAELDYGEKVSQ*
Ga0104322_13434533300007819Permafrost SoilMQIQLWEGAALSRAETVLQGTTHESVRAEIGYGEKVSQRRWSKKVEE
Ga0099829_1005023013300009038Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHDIVRAEIGYGEKVSQRRWSKKVEEGIG*
Ga0099829_1009056413300009038Vadose Zone SoilMWPPVVAVDAGAMQIQSWEGAALSRAETVLQGTTHDTVHAEIGYGKKVSRRLWLKKLEEEIG
Ga0099829_1138047413300009038Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTHDTVCAEIGYGEKVSQ*
Ga0099828_1029913723300009089Vadose Zone SoilVVAVDAGVMQIQSWEGAALSRAETVLQGTTHDIVRAEIGYGEKVSQRRWSKKVEEGIG*
Ga0099828_1142547613300009089Vadose Zone SoilMQIQSREGAALSGAETVLQGTTHDTVRPEISYGEKVSQRRWLKKVE
Ga0116214_116168623300009520Peatlands SoilMQIQSWEGAALSRADTVLQGTTHDTVRAEMGYGEKVS*
Ga0116217_1011512033300009700Peatlands SoilAVDAGAMQIQSWEGAALSRADTVLQGTTHDTVRAEMGYGEKVS*
Ga0136449_10431295113300010379Peatlands SoilMQIQLWEGAVWRCVETVLQGTTPDTLGAEIGHGEKVSRRPWSKKLEEEIGLTARH
Ga0126351_120066723300010860Boreal Forest SoilMQIQSWEGAALSRAETVLQGTTHDTVRAEIGYGEKVSQRLWSKKLD
Ga0137391_1009829913300011270Vadose Zone SoilWPPVVAVDAGPMQIQLCEGAVLSRAETVLQGTTHDTVRAEIGYGEKVS*
Ga0137389_1000487993300012096Vadose Zone SoilMQIQLCEGAVLSRAETVLQGTTHDTVRAEIGYGEKVS*
Ga0137389_1038878523300012096Vadose Zone SoilMQIQSWEGAALSGAETVLQGTTHNGVRAEVGYGEKVSQRLWSKKVEEGIGLTARHRDA
Ga0137388_1000511683300012189Vadose Zone SoilMQIQSWEGAALSGAETVLQGMAHDTVRGEIGYGEKVSQRLWPKKVEEGIGLAARH
Ga0137363_1014452353300012202Vadose Zone SoilMQIQSWEGAALSGAETVLQGTTHDTVRAEIGYGEKVSQRRWLKKVEE
Ga0137363_1069847913300012202Vadose Zone SoilMQIQSWEGAALSRAETVLQGAAHDTVRAEIGYGEKVSQRR*
Ga0137399_1099805323300012203Vadose Zone SoilAGAMQIQSWEGAALSRAETVLQGTTHDTVRAEIG*
Ga0137362_1018693223300012205Vadose Zone SoilMQIQLCEGAVLSRAETVLQGTTHDTVHAEIGYGKKVSRRLWLKKLEEEIGLTARHR
Ga0137362_1165639623300012205Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHGTVRAEIGYGEKVSRRLWSKKLEEG
Ga0137380_1043527013300012206Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTQDTVGAEIGYGEKVRKDCGRRS*
Ga0137387_1054705813300012349Vadose Zone SoilMQIQWWGGAALSRGETVLQGTTQDIVRAEIGYGEKVSQRLWSKKLEEGIG
Ga0137387_1082985523300012349Vadose Zone SoilPPVVAVDAGPMQIQWWEGAALSRAEIVLQGTRHNTVRAEIDYGEKVSQ*
Ga0137371_1053092013300012356Vadose Zone SoilMQIQSWEGATLSRAETVLQGTTHDTVRAEIGYGEKVSQRLCLKKLEEGIG
Ga0137361_1020809513300012362Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTQDTVRAEIGYGEKVSQRLWLRKLEEG
Ga0137358_1031091513300012582Vadose Zone SoilMQIQSWEGAALSGAETVLPGTTHDTVRAEIGYGEKVSQRRWLKKVEEAIGLTARH
Ga0137358_1032991013300012582Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTQDTVRAEIGYGEKVSQRL
Ga0137398_1009881123300012683Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTHDTVRVEIGYGEKVSQ*
Ga0137397_1062412113300012685Vadose Zone SoilMQIQWWDGAALRRAETVLPSTTHDTVRAEIGYGEKVSQRLW
Ga0137395_1068003023300012917Vadose Zone SoilVVAVDAGPMQIQSWEGAAFRRAETVPQGTTHDTLRSEIGHGEKVSR
Ga0137396_1016643933300012918Vadose Zone SoilWTWPPVVAVDAGPMQIQWWEGAALSRAEIVLQGTRHNTVRAEIDYGEKVSQ*
Ga0137394_1007412263300012922Vadose Zone SoilMQIQSWEGAALSGAETVLQGTTHDTVRAEIGYGEKVSQRRWLKKVEEAIGLTARH
Ga0137394_1083087923300012922Vadose Zone SoilLPEFLWWEGAALRRAETVLQGTTHDTVRAEIGFGEKVSQRLWSKKVE
Ga0137359_1050679113300012923Vadose Zone SoilMQIQSWEGAALSRAETVLQSTTHDTVRAEIGYGEKVSQRLWSKKVEEG
Ga0137419_1032559523300012925Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKVSQRRWSK
Ga0137419_1101704213300012925Vadose Zone SoilMQIQSWEGAALSGAETVLPGTTHDTVRAEIGYGEKVSQRRWLKKVEEAIGLTARHRDAE
Ga0137416_1059002713300012927Vadose Zone SoilMQIQSREGAALSGAETVLQGTTHDTVRAEIGYGEK
Ga0137404_1054146323300012929Vadose Zone SoilVAVDAGAMQIQSWEGAALSRAETVLQGTTHDTVCVEIGYGEKVSQDCG*
Ga0137404_1086730313300012929Vadose Zone SoilMQIQSCEGAVLSRAETVLQGTTHDTVRAEIGYGEKVSRRLWSKKLEEGIDWATRRSGTGR
Ga0137404_1194015613300012929Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHDTVRAEIGYGEKVLWSKK
Ga0137407_1177750323300012930Vadose Zone SoilMQIQWWEGAALSRVETVLQGTTHNTVRAEIGYGGKVS*
Ga0137405_135081613300015053Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKYCGRRSWKKESV*
Ga0137418_1080043413300015241Vadose Zone SoilWTWPPVVAVDAGAMQIQSWEGAALSRAETVLQGTTHDTVRAEIG*
Ga0137412_1003858323300015242Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHDTVCAEIGYGEKVSQ*
Ga0137409_1005087853300015245Vadose Zone SoilVVAVDAGAMQIQWWEGAALSRAETVLQGTTHDTVCAEIGYGEKVSQ*
Ga0137409_1027070213300015245Vadose Zone SoilMQIQSWEGAALSCAETVLQGTTHDTVRAEIGYGEKVSQRRW
Ga0137403_1001490313300015264Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTHDTVCVEIGYGEKVSQ*
Ga0137403_1014394533300015264Vadose Zone SoilMQIQSWEGAALSRAEAVLQGTTHDTVRAEIGYGEKVLWSKK
Ga0187804_1038786823300018006Freshwater SedimentMQIQSWEGAALSRAETVLRGTTHDTVRAEIGYGEKV
Ga0066655_1025538023300018431Grasslands SoilMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGGKVS
Ga0193729_119891523300019887SoilWEGAALSGAETVLQATTHDSVRAEIGYGEKVSQRLWWKKGSV
Ga0179590_106478713300020140Vadose Zone SoilMQIQWCEGAVLSRAETVLQGTTHDTVHAEIGYGKKVSRRLWLKKLEEEIGLTARQAVALM
Ga0210401_1101376013300020583SoilVVAVDAGALQIQWWEAALSRAETVLQGRAHDTVRAESGCGEKGPQGL
Ga0210404_1079648123300021088SoilMQIQWWEGAALSRTETVLQGTTPDTVRAEIGYGEKVSQRLWSKKLEEEIALTARHRD
Ga0210397_1052130823300021403SoilMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKVSQRLWSKKLEEE
Ga0210394_1070791413300021420SoilVVAVDAGPMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKVSQRLWSKKLEEEIA
Ga0187846_1000258433300021476BiofilmVVAVEAGPMEIQSWEGAGLRRGESVLQGKTQDTVRAEMGYHEK
Ga0212123_10002687113300022557Iron-Sulfur Acid SpringMQIQLWEGAVLRCAETVPQGTTRDTVRAEIDYGEKVSQ
Ga0212123_1030528323300022557Iron-Sulfur Acid SpringVVAVDAGPMQIQLWEGAALSRAETVPQGATHDTVRAELDYGEKVSQ
Ga0207692_1058379213300025898Corn, Switchgrass And Miscanthus RhizosphereMQIQWCEGAVLSRAETVLQGTTHDTVRAEIGYGEKVSRRL
Ga0209239_101220233300026310Grasslands SoilMQIQWWEGAALSRAEIVLQGTRHNTVRAEIDYGEKVSQ
Ga0257173_103351213300026360SoilMQIQWWEGAALSRAETVLQGTTHDTVCAEIGYGEKVSQ
Ga0257152_103057723300026369SoilVVAVDAGAMQIQSWEGAALSRAETVLQGTTHDTVCAEIG
Ga0209160_103342723300026532SoilVDAGAMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGGKVS
Ga0179587_1009384613300026557Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHDTVCAEIGYGEKVSQ
Ga0209325_101130023300027050Forest SoilMQIQSWEGAALSRAEAVLQGTTHDTVRAEIGYGEKVSQRRWSKKVEEGIGLTARHRDAQW
Ga0209331_100627833300027603Forest SoilMQIQSWEGAALSGAETVLQGTTHDSVRAEIGYGEKVSQRLWWKKGSI
Ga0208324_114362613300027604Peatlands SoilMQIQSWEGAALSRADTVLQGTTHDTVRAEMGYGEKVS
Ga0209625_105970923300027635Forest SoilMQIQSWEGAALSGAETVLQGTTHDTVRAEIGYGEKVSQRRWSKKVEEGSV
Ga0208991_106699423300027681Forest SoilMQIQSWEGAALSDAETVLQGTTHDSVRAEIGYGEKVSQRFRWKKGSV
Ga0209626_100710723300027684Forest SoilMQIQSWEGAALSRAETVLQGTTHDSVRAEIGYGEKVSQRRWSKKVEEGIGLTAR
Ga0209328_1001772213300027727Forest SoilVVAADAGPMQIQWWEGAALRRAKTVLQGRTQDTVGAEIGYG
Ga0209038_1005012023300027737Bog Forest SoilVVAVDAGAMQIQWWEGAALSRAETVLQGTTQDTVRAEIGYGE
Ga0209655_1001013023300027767Bog Forest SoilVVAVDAGAMQIQWWEGAALRRAETVLQGTTQDTVRAEIGYGE
Ga0209656_1004744013300027812Bog Forest SoilGKAVWTWPRVIAVDADLMQIQSWEGAVSRCAETVLPNAKHDTMEE
Ga0209180_1065928923300027846Vadose Zone SoilMQIQSWEGAALSRAETVLQGTTHDIVRAEIGYGEKVSQRRWSKKVEEGIG
Ga0209701_1039253523300027862Vadose Zone SoilVVAVDAGVMQIQSWEGAALSRAETVLQGTTHDIVRAEIGYGEKVSQRRWSKKVEEGIG
Ga0209380_1047825123300027889SoilMQIQWWEGAALSDAETVLQGTTQDTVRAEIGYGEKVSQGCSRRS
Ga0209488_1003331713300027903Vadose Zone SoilMQIQPWEGAALSAAETVLQGTTHDTVRAEIGYGEKVSQRR
Ga0209006_1083330523300027908Forest SoilVVAVDAGPMQIELWEGAALSGVETVPQGTTLDTVRAEIDYSEKVSQ
Ga0209526_1034254013300028047Forest SoilDAGAMQIQSWEGAALSGAETVLQGTTHDSVRAEIGYGEKVSQRLWWKKGSI
Ga0137415_1014358113300028536Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTQDTVRAEIGYGEKVSQRLWSKKLEEGIGLTAGHRDAE
Ga0137415_1041258323300028536Vadose Zone SoilMQIQWWEGAALSRAETVLQGTTQDTVRTEIGYGKKVSQRLWSKKLEEGIGLTAGHRDAE
Ga0310038_1013248523300030707Peatlands SoilMQIQSWEGAALSRAETVLQGTTHDTVRAEMGYGEKVS
Ga0310686_10968067323300031708SoilVVAVDAGPMQIQWWEGAALSRAETVLQGTTHDTVRAEIGYGEKGSQRLWLK
Ga0310686_11099131263300031708SoilMQIQWWKGAALSRTETVLQGTTPDTVRAEIGYGEKVSQRLWSKKLEEGIGLTARH
Ga0307479_1000649633300031962Hardwood Forest SoilLDVAARVAVDAGAMQIQSWEGAVLSGAEAVLQGTTHGSVRAEIGYGEKISQRLWRKKGSV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.