NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F086902

Metagenome Family F086902

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086902
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 92 residues
Representative Sequence SRLVGWSELARDAAVAAHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAAAFAGAAA
Number of Associated Samples 92
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.99 %
% of genes near scaffold ends (potentially truncated) 90.91 %
% of genes from short scaffolds (< 2000 bps) 87.27 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (61.818 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(35.455 % of family members)
Environment Ontology (ENVO) Unclassified
(53.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(65.455 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 89.66%    β-sheet: 0.00%    Coil/Unstructured: 10.34%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF04468PSP1 65.45
PF04978DUF664 2.73
PF13191AAA_16 0.91
PF02219MTHFR 0.91
PF00905Transpeptidase 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1774Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development)Signal transduction mechanisms [T] 65.45
COG06855,10-methylenetetrahydrofolate reductaseAmino acid transport and metabolism [E] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.82 %
UnclassifiedrootN/A38.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10066497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1163Open in IMG/M
3300002915|JGI25387J43893_1029944Not Available736Open in IMG/M
3300005171|Ga0066677_10691598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium571Open in IMG/M
3300005172|Ga0066683_10526551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium721Open in IMG/M
3300005174|Ga0066680_10592424Not Available695Open in IMG/M
3300005176|Ga0066679_10373626Not Available933Open in IMG/M
3300005176|Ga0066679_10670869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium674Open in IMG/M
3300005177|Ga0066690_10021381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes3610Open in IMG/M
3300005179|Ga0066684_10864197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium593Open in IMG/M
3300005186|Ga0066676_10084771All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300005186|Ga0066676_10324915Not Available1024Open in IMG/M
3300005444|Ga0070694_100163996All Organisms → cellular organisms → Bacteria1633Open in IMG/M
3300005444|Ga0070694_100828248Not Available760Open in IMG/M
3300005445|Ga0070708_101299656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium679Open in IMG/M
3300005446|Ga0066686_10468203All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium860Open in IMG/M
3300005450|Ga0066682_10831851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium555Open in IMG/M
3300005518|Ga0070699_100635896Not Available974Open in IMG/M
3300005554|Ga0066661_10501435Not Available734Open in IMG/M
3300005555|Ga0066692_10991065Not Available514Open in IMG/M
3300005557|Ga0066704_10951658Not Available530Open in IMG/M
3300005559|Ga0066700_10276281Not Available1180Open in IMG/M
3300005559|Ga0066700_10964276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium563Open in IMG/M
3300005560|Ga0066670_10485584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium760Open in IMG/M
3300005586|Ga0066691_10378604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium839Open in IMG/M
3300005598|Ga0066706_11392913Not Available529Open in IMG/M
3300006031|Ga0066651_10632513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium571Open in IMG/M
3300006032|Ga0066696_10172321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1364Open in IMG/M
3300006034|Ga0066656_10222870Not Available1206Open in IMG/M
3300006046|Ga0066652_101141495Not Available738Open in IMG/M
3300006049|Ga0075417_10394663Not Available684Open in IMG/M
3300006796|Ga0066665_10149289Not Available1772Open in IMG/M
3300007258|Ga0099793_10272099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium820Open in IMG/M
3300009012|Ga0066710_103962941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium554Open in IMG/M
3300009088|Ga0099830_11407972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium580Open in IMG/M
3300009089|Ga0099828_10639380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium957Open in IMG/M
3300009090|Ga0099827_10630258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium925Open in IMG/M
3300009090|Ga0099827_11872286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium523Open in IMG/M
3300009137|Ga0066709_102930070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium629Open in IMG/M
3300009147|Ga0114129_13069437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium547Open in IMG/M
3300009147|Ga0114129_13439967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium508Open in IMG/M
3300009816|Ga0105076_1059687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium700Open in IMG/M
3300010323|Ga0134086_10162449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium820Open in IMG/M
3300010323|Ga0134086_10444794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium528Open in IMG/M
3300010336|Ga0134071_10712118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium532Open in IMG/M
3300010371|Ga0134125_11352741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium777Open in IMG/M
3300010400|Ga0134122_12283430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium586Open in IMG/M
3300012011|Ga0120152_1166114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium574Open in IMG/M
3300012096|Ga0137389_11035110Not Available704Open in IMG/M
3300012208|Ga0137376_11007445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium713Open in IMG/M
3300012356|Ga0137371_10458180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium986Open in IMG/M
3300012363|Ga0137390_11731037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium559Open in IMG/M
3300012582|Ga0137358_10429342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium893Open in IMG/M
3300012918|Ga0137396_10463175Not Available940Open in IMG/M
3300012918|Ga0137396_10994643Not Available608Open in IMG/M
3300012925|Ga0137419_10704359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium819Open in IMG/M
3300012972|Ga0134077_10246165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium739Open in IMG/M
3300014154|Ga0134075_10452218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium571Open in IMG/M
3300014166|Ga0134079_10118210Not Available1034Open in IMG/M
3300017659|Ga0134083_10563410Not Available517Open in IMG/M
3300018027|Ga0184605_10236274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium831Open in IMG/M
3300018028|Ga0184608_10176612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium930Open in IMG/M
3300018061|Ga0184619_10209142Not Available897Open in IMG/M
3300018071|Ga0184618_10223176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium792Open in IMG/M
3300018433|Ga0066667_11902345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium542Open in IMG/M
3300018468|Ga0066662_13021092Not Available500Open in IMG/M
3300018482|Ga0066669_10633650Not Available939Open in IMG/M
3300020006|Ga0193735_1032263All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300020015|Ga0193734_1019710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1274Open in IMG/M
3300025910|Ga0207684_10030087All Organisms → cellular organisms → Bacteria4623Open in IMG/M
3300025933|Ga0207706_11723935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium504Open in IMG/M
3300026295|Ga0209234_1179407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium739Open in IMG/M
3300026296|Ga0209235_1125478All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300026300|Ga0209027_1076170All Organisms → cellular organisms → Bacteria1239Open in IMG/M
3300026309|Ga0209055_1092362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1229Open in IMG/M
3300026316|Ga0209155_1206028Not Available617Open in IMG/M
3300026322|Ga0209687_1095776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium964Open in IMG/M
3300026329|Ga0209375_1266886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium566Open in IMG/M
3300026330|Ga0209473_1149930Not Available945Open in IMG/M
3300026330|Ga0209473_1257441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium597Open in IMG/M
3300026331|Ga0209267_1010998All Organisms → cellular organisms → Bacteria4909Open in IMG/M
3300026334|Ga0209377_1264095Not Available567Open in IMG/M
3300026523|Ga0209808_1002188All Organisms → cellular organisms → Bacteria10027Open in IMG/M
3300026536|Ga0209058_1081788All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300026540|Ga0209376_1163567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1053Open in IMG/M
3300026550|Ga0209474_10633639Not Available549Open in IMG/M
3300026552|Ga0209577_10872282Not Available504Open in IMG/M
3300027862|Ga0209701_10614432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium574Open in IMG/M
3300027873|Ga0209814_10277978Not Available728Open in IMG/M
3300028536|Ga0137415_10844944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium726Open in IMG/M
3300028792|Ga0307504_10015624All Organisms → cellular organisms → Bacteria1804Open in IMG/M
3300028793|Ga0307299_10202889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium746Open in IMG/M
3300028811|Ga0307292_10026176All Organisms → cellular organisms → Bacteria2085Open in IMG/M
3300028811|Ga0307292_10077014Not Available1286Open in IMG/M
3300028811|Ga0307292_10429658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium563Open in IMG/M
3300028824|Ga0307310_10093356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1329Open in IMG/M
3300028878|Ga0307278_10328537Not Available675Open in IMG/M
3300028881|Ga0307277_10392197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium620Open in IMG/M
3300031720|Ga0307469_10716544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium909Open in IMG/M
3300031720|Ga0307469_10717547Not Available908Open in IMG/M
3300032180|Ga0307471_104348691Not Available500Open in IMG/M
3300032205|Ga0307472_100110060All Organisms → cellular organisms → Bacteria1920Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil35.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.09%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.82%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.91%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002915Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1006649723300002558Grasslands SoilVLLESRLVDWSELLRDAAIRAHGVERPLRPERASESARLADAMGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAARPA*
JGI25387J43893_102994423300002915Grasslands SoilRDAAVAAQGSERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFARAAA*
Ga0066677_1069159823300005171SoilLTDRFGWAVDLAESERDTQKRNEAIESRLREWSELARDAAAAAHGADRPVRPDRASETAQLVKAVSPRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAASLKVAA*
Ga0066683_1052655123300005172SoilRNEAIELRLGEWGELARDAAVAAHGAERALRPDRASESARLADTVGRRELVDLALAMDRWRRDVVESNVNARMLLELFVLRLPYTAALAGTHA*
Ga0066680_1059242413300005174SoilAATHAHGVDRPLRPDRKAESATLADALGRRELVDLALAFDRWRRDVVESNVNARMLLELLALRVPYAQAFAGRSA*
Ga0066679_1037362623300005176SoilGWSELARDAAVVAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAPA*
Ga0066679_1067086913300005176SoilVDLAESERDTQKRSALLTSRLIEWSELLRDAATHAHGVQRPLRPERSAETAQLATAFGRRELVDLALTFDRWRRDVVESNVNARMLLELLALRVPYAQAFAGRPA*
Ga0066690_1002138163300005177SoilSERDPQKRNDAIESRLGGWSELARDAAVAAHGAERALRPERARESAALANSVGQRELVDLALSLDRLRRDVIESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0066684_1086419713300005179SoilEAERDPQKRNDAIQSRLVGWSELARDAAVVTHGAEHALRPDRALESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0066676_1008477143300005186SoilGWSELARDAAVAAHGADRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAVA*
Ga0066676_1032491513300005186SoilWSELARDAAVATHGAERALRPDRAQESAALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0066676_1071425113300005186SoilRAHGVERPLRPERASESARLADAIGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAGKAA*
Ga0066675_10001834123300005187SoilVAPHQVGRALRPERVSESDRLAKAVSQRELVDFALALERWRRDMVESNVNARMLLELLVLKLPYAATLREAA*
Ga0070694_10016399633300005444Corn, Switchgrass And Miscanthus RhizosphereQKRNDAIQSRLVGWSELARDAAVAAHGTERALRPERVRESATLAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0070694_10082824823300005444Corn, Switchgrass And Miscanthus RhizosphereLVGWSELARDAAVAGHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFSGQAA*
Ga0070708_10129965613300005445Corn, Switchgrass And Miscanthus RhizosphereQSRLVGWSELARDAAVAAGGAERALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0066686_1046820313300005446SoilDLAESERDTQKRNDAIETRLGGWSELARDAAVAAHGAERALRPDRAHESAALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0066682_1083185123300005450SoilESERDTQKRNEAIELRLGEWGELARDAAVAAHGAERALRPDRASESAQLADTVGRRELVDLAVAMDRWRRDVVESNVNARMLLELFVLRLPYTAALARTHA*
Ga0070699_10063589623300005518Corn, Switchgrass And Miscanthus RhizosphereWSELARDAAVAPGGAERALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0070699_10121482913300005518Corn, Switchgrass And Miscanthus RhizosphereAHGAERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKPPYAAAFAGGSA*
Ga0066661_1050143523300005554SoilSELARDAAVAAHGAEHALRPDRARESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0066692_1099106523300005555SoilWSELARDAAVAAHGADRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAVA*
Ga0066704_1034293813300005557SoilGAERALRPDRASETARLAEAVGRRELVDLALSMDRWRRDVVESNVNARMLLELFVLRLPYTAALAGTRA*
Ga0066704_1095165823300005557SoilLVDWSELLRDAAIRAHGVERPLRPERASESARLADAMGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAARPA*
Ga0066700_1027628123300005559SoilRLREWSELARDAAAAAHGADRAVRPDRANETAQLVKAVSPRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAASLKVAA*
Ga0066700_1096427613300005559SoilWAVDLAESERDPQKRNDAIESRLVGWSELARDAAVAAHGADRALRPERARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAATFAGAVA*
Ga0066670_1048558413300005560SoilQKRSKMLEARFAEWAELVRDAAVASSGAERALRPTRARESAALARSVPARDLVDLALSLERWRRDVTETTVNARMLLELLVLRVPYAAGVAEAA*
Ga0066691_1037860413300005586SoilRNDAIQSRLVGWSELARDAAVAAHGAEHALRPDRARESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0066706_1139291323300005598SoilRLVGWSELARDAAVAAHGADRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAVA*
Ga0066651_1063251323300006031SoilRDPQKRNDAIESRLVGWSELARDAAVVAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAPA*
Ga0066696_1017232123300006032SoilFAWAVDLAESERDAQKRSKMLEARFAEWAELVRDAAVASSGAERALRPTRARESAALARSVPARDLVDLALSLERWRRDVTETTVNARMLLELLVLRLPYAAGVAEAA*
Ga0066656_1022287023300006034SoilLAEWCELARDAAVAPHQVGRALRPERVSESDRLAKAVSQRELVDFALALERWRRDMVESNVNARMLLELLVLKLPYAATLREAA*
Ga0066652_10114149513300006046SoilSELARDAAVAAHGADRALRPDRARESMALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAATLAGAVA*
Ga0075417_1039466313300006049Populus RhizosphereDAAVAAHGAERALRPDRQRESAALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYVATLGGTAA*
Ga0066665_1014928943300006796SoilDWSELLRDAAIRAHGVERPLRPERASESARLADAIGPRELVDLAIAFDRWRRDVVETNVNARMLLELLALRLPYAPAFATRPA*
Ga0099793_1027209923300007258Vadose Zone SoilDRFGWAVDLAESERDPQKRNDAIESRLVGWSELARDAAVASHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKLPYAATFAGAAA*
Ga0066710_10152629213300009012Grasslands SoilAHGAEGALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGGAA
Ga0066710_10396294123300009012Grasslands SoilCAVDLAQSERGPQKRNDGSASRLVGWSGLARDAPVAAHGAERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFTGAAA
Ga0099830_1140797223300009088Vadose Zone SoilLAESERDPQKRSALLQSRLVEWSDLLRDAATHAHGVDRPLRPDRKAESATLADALGRRELVDLALAFDRWRRDVVESNVNARMLLELLALRVPYAQAFAGRSA*
Ga0099828_1063938023300009089Vadose Zone SoilPQKRNDAIESRLVGWSELARDAAVAGHGAERALRPDRTRESTALANAVGQRELVDLALSLDRWRRDVVESNVNTRMLLELLALKLPYAAAFSGAAA*
Ga0099827_1063025813300009090Vadose Zone SoilRDTQKRNETIELRLGEWGELARDAAVAAHGAERALRPDRASESARLADAVGRRELVDLALAMDRWRRDVVESNVNARMLLELFVLRLPYSAALAGTHA*
Ga0099827_1187228613300009090Vadose Zone SoilLAESERDPQKRNDAIESRLVGWSELARDAAVARYGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0066709_10293007013300009137Grasslands SoilRDPQKRNTAIQSRVVGWGELGRDASVAAHGAEHALRPDRARESATLAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0114129_1306943713300009147Populus RhizosphereTQKRNDAIESRLGGWSELARDAAVAAHGAERALRPDRQRESPALANAVGQRELLDIALSLDRWRRDVIESNVNARMLLELLVLRLPYVATLGGTAA*
Ga0114129_1343996713300009147Populus RhizosphereTQKRNDAIESRLGGWSELARDAAVAAHGAERALRPDRQRESAALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYVATLGGTAA*
Ga0105076_105968713300009816Groundwater SandERDPQKRNDAIQSRLGGWSELARDAAVVAHGTERTLRPDRARESAALANAVGQRELVDLALSLDRWRRDIVESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0134086_1016244923300010323Grasslands SoilERDPQKRNDAIQSRLVGWSELARDAAVATHGAEHALRPDRALESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0134086_1044479413300010323Grasslands SoilKRSDAIETRLTGWSELARDAAVVAHGADRALRPERARESVALATGAGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYVATFAGAAA*
Ga0134071_1071211813300010336Grasslands SoilLAESERDPQKRNDAIESRLVGWSELARDAAVARYGAEHALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0134125_1135274123300010371Terrestrial SoilESERDPQKRNDAIESRLVGWSELARDAAVAANGTERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFAGAAA*
Ga0134122_1228343023300010400Terrestrial SoilIESRLVGWSELARDAAVAANGTERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNINARMLLELLALKLPYAAAFAGAAA*
Ga0120152_116611413300012011PermafrostAVDLAESERDAQKRNDAIESRLVGWSELARDAAVAAHGAGRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0137389_1103511023300012096Vadose Zone SoilDAAVAAHGAERALRPDRARESTALANAVGKRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAATFAGAAA*
Ga0137376_1100744523300012208Vadose Zone SoilAESERDPQKRNDAIESRLVGWSELARDAAVVAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAPA*
Ga0137378_1076631323300012210Vadose Zone SoilAAHGADRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAAA*
Ga0137371_1045818023300012356Vadose Zone SoilELAESERDPQKRNDAIESRLVGWSELARDAAVAAHGADRALRPDRARESMALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAATFAGAVA*
Ga0137390_1173103723300012363Vadose Zone SoilSERDPQKRNDAIESRLVGWSELARDAAVAGHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFSGAAA*
Ga0137358_1042934213300012582Vadose Zone SoilTERDPQKRNDAIESRLVGWSELARDAAVASHGAERALRPDRARESAALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKLPYAATFAGAAA*
Ga0137396_1046317513300012918Vadose Zone SoilGWSELARDAAVAAHGAERALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGAAA*
Ga0137396_1099464313300012918Vadose Zone SoilAAVASHGTERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAATFAGAAA*
Ga0137419_1070435923300012925Vadose Zone SoilESRLVGWSELARDAAVASHGAERALRPDRARESAALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKLPYAATFAGAAA*
Ga0134077_1024616523300012972Grasslands SoilFAWAVDLAESERDTQKRNEAIELRLGEWGELARDAAVAAHGAERALRPDRASESARLADTVGRRELVDLALAMDRWRRDVVESNVNARMLLELFVLRLPYTAALAGTHA*
Ga0134075_1032501723300014154Grasslands SoilAHGADRALRPERARESVALATGAGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYVATFAGAAA*
Ga0134075_1045221823300014154Grasslands SoilSERDPQKRNVLLESRLVDWSELLRDAAIRAHGVERPLRPERASESARLADAIGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAGKAA*
Ga0134079_1011821013300014166Grasslands SoilESRLREWSELARDAAAAAHGADRAVRPDRANETAQLVKAVSPRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAASLKVAA*
Ga0134083_1056341023300017659Grasslands SoilWSELARDAAVAAHGAERALRPDRAHESAALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA
Ga0184605_1023627423300018027Groundwater SedimentSERDPQKRNDAIESRLVGWGELARDAAVASHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFAGAAA
Ga0184608_1017661213300018028Groundwater SedimentKRNDAIETRLVGWSELARDAAVAAHGAERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFAGASA
Ga0184619_1020914213300018061Groundwater SedimentRDAAVPAHGAEHALRPGRASETARLAESIGRRELVDLALAMDRWRRDVVESNVNARMLLELFVLRLPYAAALGGTRA
Ga0184618_1022317623300018071Groundwater SedimentAESERDPQKRNDAIESRLVGWSELARDAAVAAHGAERSLRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA
Ga0066667_1190234523300018433Grasslands SoilESERDTQKRNEAIESRLREWSELARDAAAAAHGADRAVRPDRASETAQLVKAVSPRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAASLKVAA
Ga0066662_1026221313300018468Grasslands SoilVAPHQVGRALRPERVSESDRLAKAVSQRELVDFALALERWRRDMVESNVNARMLLELLVLKLPYAATLREAA
Ga0066662_1302109213300018468Grasslands SoilLVDWSELLRDAAIRAHGVERPLRPERASESARLADAMGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAARPA
Ga0066669_1063365013300018482Grasslands SoilVGWSELARDAAVAAHGAEGALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGGAA
Ga0193735_103226313300020006SoilLVGWSELARDAAVAAHGAERALRPERARESAALADAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAATFAGAAS
Ga0193734_101971023300020015SoilDPQKRNDAIESRLVGWSELARDAVVVAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAPA
Ga0207684_1003008713300025910Corn, Switchgrass And Miscanthus RhizosphereGSGLTDRFGWAVDLAESERDPQKRNDAIESRLVGWSELARDAVVAGHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFSGQAA
Ga0207706_1172393513300025933Corn RhizosphereVGSGLTDRFGWAVNLAESERDPQKRNDAIESRLVGWSELARDAAVAANGTERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNINARMLLELLALKLPYAAAFAGAAA
Ga0209234_117940723300026295Grasslands SoilLAESERDTQKRNDAIQSRLVGWSELARDAAVAAHGAERALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGAT
Ga0209235_112547813300026296Grasslands SoilVVDWSELLRDAAIRAHGVERPLRPERASESARLADAMGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAARPA
Ga0209027_107617013300026300Grasslands SoilLVGWSELARDAAVAAQGSERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFARAAA
Ga0209055_109236223300026309SoilFAWAVDLAESERDPQKRNDAIESRLGGWSELARDAAVAAHGAERALRPERARESAALANSVGQRELVDLALSLDRLRRDVIESNVNARMLLELLVLRLPYAAAFAGAAA
Ga0209155_120602813300026316SoilRLVGWSELARDAAVAAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAASLKVAA
Ga0209687_109577613300026322SoilVDLAESERDAQKRSKMLEARLAEWAELVRDAAVASSGAERALRPTRARESAALARSVPARDLVDLALSLERWRRDVTETTVNARMLLELLVLRVPYAAGVAEAA
Ga0209266_115010723300026327SoilAAVAPHQVGRALRPERVSESDRLAKAVSQRELVDFALALERWRRDMVESNVNARMLLELLVLKLPYAATLREAA
Ga0209375_126688613300026329SoilGWAVELAESERDPQKRNDAIESRLVGWSELARDAAVAAHGADRALRPDRARESMALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAVA
Ga0209473_114993013300026330SoilRLAEWCELARDAAVAPHQVGRALRPERVSESDRLAKAVSQRELVDFALALERWRRDMVESNVNARMLLELLVLKLPYAATLREAA
Ga0209473_125744123300026330SoilEAERDPQKRNDAIQSRLVGWSELARDAAVVTHGAEHALRPDRALESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA
Ga0209267_101099813300026331SoilAWAVDLAEAERDPQKRNDAIQSRLVGWSELARDAAVATHGAEHALRPDRALESATLAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA
Ga0209377_126409523300026334SoilGWSELARDAAVAAHGADRALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYAAAFAGAVA
Ga0209808_100218813300026523SoilFAWAVDLAESERDPQKRNDVIQSRLIGWSELARDAAVAAHGAERALRPERARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGPAA
Ga0209058_108178833300026536SoilSERDPQKRNDVIQSRLVGWSELARDAAVAAHGAEGALRPDRARESAALAKAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALRLPYAAAFAGGAA
Ga0209376_116356723300026540SoilRDPQKRNVLLESRLVDWSELLRDAAIRAHGVERPLRPERASESARLADAIGPRELVDLAIAFDRWRRDVVESNVNARMLLELLALRLPYAPAFAGKAA
Ga0209474_1063363913300026550SoilWSELARDAAVAAQGSERALRPDRARESTALAKAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFARAAA
Ga0209577_1087228223300026552SoilAATHAHGVQRPLRPERSAETAQLATAFGRRELVDLALTFDRWRRDVVESNVNARMLLELLALRVPYAQAFAGRPA
Ga0209701_1061443213300027862Vadose Zone SoilESERDPQKRSALLQSRLVEWSDLLRDAATHAHGVDRPLRPDRKAESATLADALGRRELVDLALAFDRWRRDVVESNVNARMLLELLALRVPYAQAFAGRSA
Ga0209814_1027797813300027873Populus RhizosphereVAAHGAERALRPDRQRESAALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLVLRLPYVATLGGTAA
Ga0137415_1084494423300028536Vadose Zone SoilESERDPQKRNDAIESRLVGWSELARDAAVASHGTERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA
Ga0307504_1001562413300028792SoilERDPQKRNDAIESRLIGWSELARDAAVAAHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKLPYAAAFAGGSA
Ga0307299_1020288923300028793SoilRDPQKRNDAIESRLVGWSELARDAAVASHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA
Ga0307292_1002617643300028811SoilDAIESRLVGWSELARDAAVASHSAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAAAFAGAAA
Ga0307292_1007701423300028811SoilWSELARDAAVASHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLRLPYAAAFAGAAA
Ga0307292_1042965813300028811SoilKRNDAIESRLVGWSELARDAAVAANGTERALRPERARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALKLPYAAAFAGAAA
Ga0307310_1009335623300028824SoilESRLVGWSELARDAAVAAHGAERALRPERARESAALANAVGERELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAATFAGAAA
Ga0307278_1032853723300028878SoilSRLVGWSELARDAAVAAHGAERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAAAFAGAAA
Ga0307277_1039219713300028881SoilRNDAIESRLVGWSELARDAAVAAHGAERALRPDRARESTELANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLVLKLPYAAAFAGAAA
Ga0307469_1071654413300031720Hardwood Forest SoilRDPQKRNDAIESRLAGWSELARDAAVAAHGAERALRPDRSRESTALANAVGQRELVDLALSLDRWRRDVIESNVNARMLLELLALKLPYAAAFAGGSA
Ga0307469_1071754723300031720Hardwood Forest SoilARDAAVASGGTERALRPDRARESTALANAVGQRELVDLALSLDRWRRDVVESNVNARMLLELLALRLPYAAAFAGAAA
Ga0307471_10434869113300032180Hardwood Forest SoilLEARFAEWGELVRDAAVASSGAGHALRPTRARESAALARTVPTRDLVDLALSLERWRRDVTETTVNARMLLELLVLRVPYAAGVAEAA
Ga0307472_10011006033300032205Hardwood Forest SoilAAVASSGAGHALRPTRARESAALARTVPTRDLVDLALSLERWRRDVTETTVNARMLLELLVLRVPYAADVAEAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.