Metagenome / Metatranscriptome Family F086928

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086928
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	81 residues
Representative Sequence	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAS
Number of Associated Samples	92
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.73 %
% of genes near scaffold ends (potentially truncated)	23.64 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.636 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.95% β-sheet: 0.00% Coil/Unstructured: 45.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13411	MerR_1	8.18
PF02566	OsmC	7.27
PF13759	2OG-FeII_Oxy_5	5.45
PF00376	MerR	3.64
PF05988	DUF899	2.73
PF14310	Fn3-like	2.73
PF10670	DUF4198	0.91
PF13432	TPR_16	0.91
PF05717	TnpB_IS66	0.91
PF10609	ParA	0.91
PF08818	DUF1801	0.91
PF02371	Transposase_20	0.91
PF08327	AHSA1	0.91
PF03069	FmdA_AmdA	0.91
PF13649	Methyltransf_25	0.91
PF13676	TIR_2	0.91
PF13437	HlyD_3	0.91
PF02873	MurB_C	0.91
PF01425	Amidase	0.91
PF12973	Cupin_7	0.91
PF01810	LysE	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	7.27
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	7.27
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.73
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0812	UDP-N-acetylenolpyruvoylglucosamine reductase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.91
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.91
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.73 %
Unclassified	root	N/A	9.09 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.09 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.09 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.82 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.09 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	1.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.09 %
Sulfurisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sulfurisoma	1.82 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.09 %
Sulfurisoma sediminicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sulfurisoma → Sulfurisoma sediminicola	1.82 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10123989	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300001661\|JGI12053J15887_10024662	All Organisms → cellular organisms → Bacteria	3369	Open in IMG/M
3300001661\|JGI12053J15887_10438631	Not Available	626	Open in IMG/M
3300001661\|JGI12053J15887_10597066	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300002245\|JGIcombinedJ26739_100024007	All Organisms → cellular organisms → Bacteria → Proteobacteria	5300	Open in IMG/M
3300002245\|JGIcombinedJ26739_100600301	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004633\|Ga0066395_10806229	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300005174\|Ga0066680_10581910	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005176\|Ga0066679_10790027	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005332\|Ga0066388_101525614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1170	Open in IMG/M
3300005363\|Ga0008090_15851578	Not Available	1578	Open in IMG/M
3300005467\|Ga0070706_100409680	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300005536\|Ga0070697_101862273	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005538\|Ga0070731_10418280	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300005586\|Ga0066691_10105788	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300005764\|Ga0066903_100481679	All Organisms → cellular organisms → Bacteria → Proteobacteria	2092	Open in IMG/M
3300006050\|Ga0075028_100345967	Not Available	839	Open in IMG/M
3300006794\|Ga0066658_10277246	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006797\|Ga0066659_10567602	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300006806\|Ga0079220_10597545	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300009137\|Ga0066709_102678729	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010046\|Ga0126384_12011408	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300010048\|Ga0126373_10254140	All Organisms → cellular organisms → Bacteria → Acidobacteria	1731	Open in IMG/M
3300010048\|Ga0126373_10763760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300010048\|Ga0126373_10771587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300010048\|Ga0126373_12768669	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300010358\|Ga0126370_12193404	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300010360\|Ga0126372_10252745	Not Available	1514	Open in IMG/M
3300010361\|Ga0126378_11592746	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300010361\|Ga0126378_12231886	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300010366\|Ga0126379_12969004	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300010376\|Ga0126381_100844134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1317	Open in IMG/M
3300010398\|Ga0126383_11512766	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010863\|Ga0124850_1120513	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300011269\|Ga0137392_10943497	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300012202\|Ga0137363_10187854	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300012203\|Ga0137399_11293474	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012361\|Ga0137360_11675109	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012917\|Ga0137395_10002887	All Organisms → cellular organisms → Bacteria	8420	Open in IMG/M
3300012918\|Ga0137396_10062404	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300012925\|Ga0137419_10251621	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300012925\|Ga0137419_11837048	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012927\|Ga0137416_10052191	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300012927\|Ga0137416_10239791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sulfurisoma → Sulfurisoma sediminicola	1476	Open in IMG/M
3300012971\|Ga0126369_10238737	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300012971\|Ga0126369_11516063	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300015241\|Ga0137418_10343019	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300015264\|Ga0137403_10575023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	993	Open in IMG/M
3300016319\|Ga0182033_10554044	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300016341\|Ga0182035_10162496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300016387\|Ga0182040_10092188	All Organisms → cellular organisms → Bacteria → Acidobacteria	2031	Open in IMG/M
3300020022\|Ga0193733_1020804	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300020199\|Ga0179592_10336471	Not Available	666	Open in IMG/M
3300020579\|Ga0210407_10009713	All Organisms → cellular organisms → Bacteria → Proteobacteria	7191	Open in IMG/M
3300021168\|Ga0210406_10220673	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300021178\|Ga0210408_10010016	All Organisms → cellular organisms → Bacteria	7929	Open in IMG/M
3300021432\|Ga0210384_10668913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	930	Open in IMG/M
3300021479\|Ga0210410_11394768	Not Available	593	Open in IMG/M
3300021560\|Ga0126371_10375809	All Organisms → cellular organisms → Bacteria → Acidobacteria	1560	Open in IMG/M
3300021560\|Ga0126371_11084795	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300024330\|Ga0137417_1000077	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300024330\|Ga0137417_1093061	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300025910\|Ga0207684_10832148	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300026325\|Ga0209152_10073875	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300026333\|Ga0209158_1335955	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300026482\|Ga0257172_1005947	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300026551\|Ga0209648_10032468	All Organisms → cellular organisms → Bacteria → Proteobacteria	4549	Open in IMG/M
3300027181\|Ga0208997_1064111	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300027376\|Ga0209004_1072445	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300027527\|Ga0209684_1057420	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300027603\|Ga0209331_1097770	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027610\|Ga0209528_1094630	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300027616\|Ga0209106_1043970	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300027616\|Ga0209106_1045273	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300027633\|Ga0208988_1017939	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300027645\|Ga0209117_1124990	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300027669\|Ga0208981_1071599	Not Available	884	Open in IMG/M
3300027681\|Ga0208991_1035689	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300027738\|Ga0208989_10017869	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300028047\|Ga0209526_10036604	All Organisms → cellular organisms → Bacteria → Proteobacteria	3454	Open in IMG/M
3300028047\|Ga0209526_10133895	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300028536\|Ga0137415_10243032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sulfurisoma → Sulfurisoma sediminicola	1610	Open in IMG/M
3300028536\|Ga0137415_10445066	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300031543\|Ga0318516_10041359	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300031545\|Ga0318541_10076192	All Organisms → cellular organisms → Bacteria → Acidobacteria	1768	Open in IMG/M
3300031546\|Ga0318538_10083525	Not Available	1625	Open in IMG/M
3300031546\|Ga0318538_10444049	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300031640\|Ga0318555_10399758	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300031681\|Ga0318572_10009720	All Organisms → cellular organisms → Bacteria	4522	Open in IMG/M
3300031720\|Ga0307469_10554539	All Organisms → cellular organisms → Bacteria → Proteobacteria	1018	Open in IMG/M
3300031736\|Ga0318501_10746750	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300031740\|Ga0307468_100155780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1475	Open in IMG/M
3300031747\|Ga0318502_10027432	All Organisms → cellular organisms → Bacteria → Acidobacteria	2838	Open in IMG/M
3300031747\|Ga0318502_10064049	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300031754\|Ga0307475_10631459	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300031764\|Ga0318535_10008958	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300031781\|Ga0318547_10775499	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300031793\|Ga0318548_10484732	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300031820\|Ga0307473_10125225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1418	Open in IMG/M
3300031860\|Ga0318495_10546729	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300031879\|Ga0306919_10403828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300031945\|Ga0310913_10173306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1500	Open in IMG/M
3300031962\|Ga0307479_10903089	All Organisms → cellular organisms → Bacteria → Proteobacteria	855	Open in IMG/M
3300032039\|Ga0318559_10413590	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300032044\|Ga0318558_10026998	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300032059\|Ga0318533_10291158	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300032059\|Ga0318533_10581173	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300032063\|Ga0318504_10628629	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300032066\|Ga0318514_10080568	Not Available	1625	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.09%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.09%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.55%
Loam	Environmental → Terrestrial → Soil → Loam	24.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_101239891	3300001545	Forest Soil	MLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPEAARSSR*
JGI12053J15887_100246623	3300001661	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYRVGRFCVWDLTVIALIVAGLVWASVGGRRSEPPEAARSSR*
JGI12053J15887_104386312	3300001661	Forest Soil	MGRVKFGQLPMLLRVVVGIALFNMWVSFEEFVVNRSDLWKYMPGYKLDQGCIWDLSVGMLIVAGLVWASVRGNRAHPGQTLS*
JGI12053J15887_105970661	3300001661	Forest Soil	VERLKFGQLPMLVRVVVGVSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGASIIAGLVWASVGGRRSNTAGR*
JGIcombinedJ26739_1000240074	3300002245	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRNGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGSRRSEPPEAARSSR*
JGIcombinedJ26739_1006003011	3300002245	Forest Soil	RAVARSSARRWTVERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPEAARSSR*
Ga0066395_108062292	3300004633	Tropical Forest Soil	MMRLSFGQLPLLLRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAS*
Ga0066680_105819102	3300005174	Soil	MLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPERNRIARLTL*
Ga0066679_107900272	3300005176	Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVGGRRS*
Ga0066388_1015256143	3300005332	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVGDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASGSPDARAT*
Ga0008090_158515781	3300005363	Tropical Rainforest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWRYMPYYNVAEGCVWDLTVAALIVAGLAWASIRGRASSSLDTARAT*
Ga0070706_1004096802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHRAVAGASARRWTVGRLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDFTVIALIIAGLVWASVGGRRSEPTEAVHSSR*
Ga0070697_1018622731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MHRAVAGSSARRWTVERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYRVGRFCVWDFTVIALIIAGLVWA
Ga0070731_104182802	3300005538	Surface Soil	MERLSFGQLPRLARVAIGLSFFNIWWSFEEFIVDRFGLSKYMPDYKVGVLCVWDLSVATLIVVGLVWASRRGARPQHP*
Ga0066691_101057883	3300005586	Soil	VERLRFRQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPERNRIARLTL*
Ga0066903_1004816791	3300005764	Tropical Forest Soil	RLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARASPRGCIGA*
Ga0075028_1003459672	3300006050	Watersheds	MGRVKFGQLPMLLRVVVGIALFNMWVSFEEFVVNRSDLWQYMPGYKLDQGCIWDLSVGMLIVAGLVWASVRGDRAQPGETLS*
Ga0066658_102772463	3300006794	Soil	MLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVGGRRS*
Ga0066659_105676022	3300006797	Soil	VERLRFRQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVGGRRS*
Ga0079220_105975452	3300006806	Agricultural Soil	MARVSFGQLPMLVRVVTGVALFNAWVSFEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWASIAGRASGSRDARAT*
Ga0066709_1026787292	3300009137	Grasslands Soil	MLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPEPNRITRLTL*
Ga0126384_120114082	3300010046	Tropical Forest Soil	MMSLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT*
Ga0126373_102541402	3300010048	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT*
Ga0126373_107637601	3300010048	Tropical Forest Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVTQGCVWDLVVAALIVIGLTWASIRSRASSALDARTTSIL*
Ga0126373_107715871	3300010048	Tropical Forest Soil	MVRLSFGELPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCIWDLMVAALIVVGLTLASIRSRASSSLDVRAT*
Ga0126373_127686691	3300010048	Tropical Forest Soil	MVRLSFGQLPLLARVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIRSRASSSLGTRTT*
Ga0126370_121934042	3300010358	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVVLTWASIKHRASSSPDARAS*
Ga0126372_102527453	3300010360	Tropical Forest Soil	MTRLSFGQLPLLVRVVTGVALFNAWVSFEEFVLDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWA
Ga0126378_115927462	3300010361	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASVKHRASSSADARAT*
Ga0126378_122318861	3300010361	Tropical Forest Soil	LVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLAVAALIVVGLTRASISSRASNSLDVPTT*
Ga0126379_129690041	3300010366	Tropical Forest Soil	MVRLSFGQLPLLARVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIRSRASSSLHASTT*
Ga0126381_1008441341	3300010376	Tropical Forest Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCIWDLVVAALIVVGLTLASIRSRASSSLDVRAT*
Ga0126383_115127662	3300010398	Tropical Forest Soil	LSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT*
Ga0124850_11205133	3300010863	Tropical Forest Soil	MMRLSFGQLPLLLRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARA
Ga0137392_109434972	3300011269	Vadose Zone Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYRVGQFCVWDLTVIALIIAGLVWASVGGRRSEPPKVARSSR*
Ga0137363_101878543	3300012202	Vadose Zone Soil	MLVRVVIGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPERNRIARLTL*
Ga0137399_112934742	3300012203	Vadose Zone Soil	VERLRFGQLPLLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVGGRRSQPPEAARSSR*
Ga0137360_116751092	3300012361	Vadose Zone Soil	VERLRFRQLPMLVRVVIGLSLLNAWVSFEEFVVDRIGLWKYMPGYRVGQGCVWDLTVGALIIAGLGWASIGGRRSEPPEAVRSSR*
Ga0137395_1000288713	3300012917	Vadose Zone Soil	VERLRFQQLPMLVRVVVGLSLFNAWVSFEEFVVDRVGLWKYMPGYKVGQGCVWDLTVGALIIAGLVWASVGGRRSEPPDAVRSSR*
Ga0137396_100624043	3300012918	Vadose Zone Soil	VERLRFGQLPLLVRVVVGLSLLNAWASFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVDGRRSQPPEAARSSRPR*
Ga0137419_102516212	3300012925	Vadose Zone Soil	VERLRFGQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLGWASVGGRRSEPPEAVRSSR*
Ga0137419_118370481	3300012925	Vadose Zone Soil	VERLRFGQLPLLVRVVVGLSLLNAWASFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVEGRRSQPPEAARSSRPR*
Ga0137416_100521914	3300012927	Vadose Zone Soil	MLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLVWASVGGRRSEPPDAVRSSR*
Ga0137416_102397912	3300012927	Vadose Zone Soil	VDKLTFAQLPVLVRISVGLSLINIWVSFEEFVVDRVGLWKYMPYYKVAQFCVWDFTVISLVVAGLFWASVRGRRSQAPQRA*
Ga0126369_102387373	3300012971	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAS*
Ga0126369_115160632	3300012971	Tropical Forest Soil	VLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVGEGCVWDLAVAVLVVAGLTWASIGGRESRPG*
Ga0137418_103430192	3300015241	Vadose Zone Soil	VERLRFGQLPLLVRVVVGLSLLNAWASFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVEGRRSQPPEAARSSR*
Ga0137403_105750231	3300015264	Vadose Zone Soil	VERLRFGQLPTLVRVVVGVSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPERNRIARLTL*
Ga0182033_105540441	3300016319	Soil	LPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIRSRASNSLDARTA
Ga0182035_101624963	3300016341	Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRAS
Ga0182040_100921882	3300016387	Soil	MMSLSFGQLPLLVRGVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT
Ga0193733_10208043	3300020022	Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPEAARSSR
Ga0179592_103364711	3300020199	Vadose Zone Soil	MGRVKFGQLPMLLRVVVGIALFNMWVSFEEFVVNRSDLWKYMPGYKLDQGCIWDLSVGMLIVAGLVWASVRGNRAQPGQTLS
Ga0210407_100097138	3300020579	Soil	MGRVKFGQLPMLLRVVVGIALFNMWVSFEEFVVNRSDLWQYMPGYKRDQGCIWDLSVGMLIVAGLVWASIRGSRAQPGETLS
Ga0210406_102206732	3300021168	Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSDLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRQSEPPDTARSSR
Ga0210408_100100168	3300021178	Soil	VEQLKFGQLPMLLRVVVGLSLFNAWVSFEEFVVDRVGLWKYMPGYKVGQGCVWDLSVAALIVAGLVWASVGGRRSQPPQAARSSGN
Ga0210384_106689131	3300021432	Soil	EQLKFGQLPMVLRVVVGLSLFNAWVSFEEFVVDRVGLWKYMPGYKVGQGCVWDLSVAALIVAGLVWASVGGRRSQPPQAARSSGN
Ga0210410_113947682	3300021479	Soil	MGRVKFGQLPMLLRVVVGIALFNMWVSFEEFVVNRSDLWQYMPGYKLDQGCIWDLSVGMLIVAGLVWASIRGSRAQP
Ga0126371_103758093	3300021560	Tropical Forest Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRVSSSPDARAT
Ga0126371_110847952	3300021560	Tropical Forest Soil	MMRLSFGQLPLLLRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAS
Ga0137417_10000771	3300024330	Vadose Zone Soil	VERLRFRQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLVWASV
Ga0137417_10930611	3300024330	Vadose Zone Soil	VERLRFRQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLVWASVGGRRSEPPDAVRSSR
Ga0207684_108321481	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDFTVIALIIAGLVWASVGGRRSEPTEAVHSSR
Ga0209152_100738752	3300026325	Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVVTLIIAGLVWASVGGRRS
Ga0209158_13359551	3300026333	Soil	AHPLHRAVARSGARRWTVERLRFRQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPERNRIARLTL
Ga0257172_10059472	3300026482	Soil	VERLRFGQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYRVGQGCVWDLTVGALIIAGLVWASVGGRRSQPPEAARSSG
Ga0209648_100324681	3300026551	Grasslands Soil	VERLRFGQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKHMPGYKVGQGCVWDLTVGALIIAGLVWASVGGRPSQPPEAVRSSG
Ga0208997_10641112	3300027181	Forest Soil	LRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYRVGRFCVWDLTVIALIVAGLVWASVGGRRPEPPEAARSSR
Ga0209004_10724452	3300027376	Forest Soil	MSRVSFGQLPMLVRVVTGVALFNAWVSLEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWVSIAGRPSGSLDARTT
Ga0209684_10574201	3300027527	Tropical Forest Soil	MDRIPFKQLPTIVRIAVWLVFNNAWWSLEEFVIDRIGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRSSSSPDARAT
Ga0209331_10977702	3300027603	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRNGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGSRRSEPPEAARSSR
Ga0209528_10946302	3300027610	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRIGLWKYMPGYRVGQGCVWDLTVGALIIAGLVWASVGGPRSEPPEAMRSSR
Ga0209106_10439701	3300027616	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYRVGRFCVWDLSVIALIVAGLVWASVGGRRSEPPEAARSS
Ga0209106_10452732	3300027616	Forest Soil	VERLRFGQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLGWASVGGRRSEPREAVRSSR
Ga0208988_10179393	3300027633	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGIWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSEPPEAARSSR
Ga0209117_11249901	3300027645	Forest Soil	RWRVDRLTFGQLPVLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVAALIVAGLVWASVRGRRSHTP
Ga0208981_10715992	3300027669	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVNRSDLWKYMPGYKLDRGCIWDLSVGMLIVAGLVWASVRGNRAQPGETLS
Ga0208991_10356891	3300027681	Forest Soil	VERLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSSLWKYMPDYRVGQFCVWDLTVIVLIIAGLVWASVGGRRSEPPEAARSAR
Ga0208989_100178691	3300027738	Forest Soil	MLVRVVVGLSLLNAWVSFEEFVVDRSSLWKYMPDYRVGRFCVWDLTVIALIVAGLVWASVGGRRSEPPEAARSSR
Ga0209526_100366047	3300028047	Forest Soil	RLRFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRNGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGSRRSEPPEAARSSR
Ga0209526_101338953	3300028047	Forest Soil	RFGQLPMLVRVVVGLSLLNAWVSFEEFVVDRSGLWKYMPDYKVGRFCVWDLTVIALIIAGLVWASVGGRRSESPEAARSSR
Ga0137415_102430322	3300028536	Vadose Zone Soil	VDKLTFAQLPVLVRISVGLSLINIWVSFEEFVVDRVGLWKYMPYYKVAQFCVWDFTVISLVVAGLFWASVRGRRSQAPQRA
Ga0137415_104450662	3300028536	Vadose Zone Soil	VERLRFGQLPMLVRVVVGLSLFNAWVSFEEFVVDRIGLWKYMPGYKVGQGCVWDLTVGALIIAGLVWASVGGRRSEPPDAVRSSR
Ga0318516_100413592	3300031543	Soil	MMSLSFGQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT
Ga0318541_100761924	3300031545	Soil	MRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0318538_100835251	3300031546	Soil	FGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0318538_104440491	3300031546	Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRIGLWKYMPYYRVAQGCVWDLVVAALIVVGLTWASIRSRASSSLDARTT
Ga0318555_103997582	3300031640	Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPD
Ga0318572_100097204	3300031681	Soil	FGQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0307469_105545392	3300031720	Hardwood Forest Soil	MLVRVVTGIALFNAWVSFEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWASIAGRASGSRDAHAT
Ga0318501_107467501	3300031736	Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCAWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0307468_1001557801	3300031740	Hardwood Forest Soil	VDRLTFAQLPLIARVSVGLSLINIWVSFEEFVVDRVGLWKYLPYYKVAQFCLWDLMVITLVIASLSWSSVRGRRLHASQGG
Ga0318502_100274323	3300031747	Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIRSRASSSLDARTT
Ga0318502_100640493	3300031747	Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT
Ga0307477_103096662	3300031753	Hardwood Forest Soil	ALFNAWVSLEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWASIAGRASGSRDAHAI
Ga0307475_106314592	3300031754	Hardwood Forest Soil	MARVSFGQLPMLVRVVTGLALFNAWVSFEEFVVDRIGLWKYMPYYEVGQGCVWDLTVAVLIVAGLTWASIAGRASGSRDARAA
Ga0318535_100089583	3300031764	Soil	MMSLSFEQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT
Ga0318547_107754991	3300031781	Soil	MVGLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIRSRASNSLDARTA
Ga0318548_104847321	3300031793	Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRIGLWKYMPYYRVAQGCVWDLVVAALIVVGPTWASIRSRASSSLDARTT
Ga0307473_101252252	3300031820	Hardwood Forest Soil	MARVSFGQLPMLVRVVTGLALFNAWVSFEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWASIAGRASGSRDAHAI
Ga0318495_105467291	3300031860	Soil	MMSLSFGQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKH
Ga0306919_104038282	3300031879	Soil	MMRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0310913_101733064	3300031945	Soil	MVRLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRIGLWKYMPYYRVAQVCVWDLVVAALIVVGLTWASIRSRASSSLDARTT
Ga0307479_109030892	3300031962	Hardwood Forest Soil	MLVRVVTGVALFNAWVSFEEFVVDRIGLWKYMPYYKVGQGCVWDLTVAVLIVAGLTWASIAGRVSGSRDAHAI
Ga0318559_104135901	3300032039	Soil	MMSLSFGQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0318558_100269982	3300032044	Soil	MMSLSFGQLPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCAWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0318533_102911581	3300032059	Soil	RVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT
Ga0318533_105811732	3300032059	Soil	MVGLSFGQLPLLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLVVAALIVVGLTWASIR
Ga0318504_106286291	3300032063	Soil	LLVRVVTGVALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCAWDLTVATLIVVSLTWASIKHRASSSPDARAT
Ga0318514_100805684	3300032066	Soil	LPLLVRVVTGIALFNAWVSFEEFVVDRVGLWKYMPYYKVAQGCVWDLTVATLIVVGLTWASIKHRASSSPDARAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086928

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences