Metagenome / Metatranscriptome Family F087005

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087005
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	43 residues
Representative Sequence	MDRRDQELLDKQMRRLTPPRNEGVIAVMLAAMFLVGMTLGSVL
Number of Associated Samples	75
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.65 %
% of genes near scaffold ends (potentially truncated)	89.09 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (43.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.30% β-sheet: 0.00% Coil/Unstructured: 50.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03330	DPBB_1	1.82
PF08734	GYD	1.82
PF00248	Aldo_ket_red	0.91
PF04226	Transgly_assoc	0.91
PF04107	GCS2	0.91
PF11154	DUF2934	0.91
PF06411	HdeA	0.91
PF13358	DDE_3	0.91
PF09361	Phasin_2	0.91
PF13473	Cupredoxin_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.82
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
All Organisms	root	All Organisms	28.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
cellular organisms	root	All Organisms → cellular organisms	28.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.55 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.91 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.82 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.82 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.82 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.09 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1.82 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.91 %
Bradyrhizobium sp. Rc3b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc3b	0.91 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02I6V56	Not Available	541	Open in IMG/M
3300004633\|Ga0066395_10375347	Not Available	796	Open in IMG/M
3300005172\|Ga0066683_10848673	Not Available	527	Open in IMG/M
3300005332\|Ga0066388_100183566	All Organisms → cellular organisms → Bacteria → Proteobacteria	2702	Open in IMG/M
3300005332\|Ga0066388_100305158	Not Available	2237	Open in IMG/M
3300005332\|Ga0066388_101066165	Not Available	1363	Open in IMG/M
3300005332\|Ga0066388_102948184	Not Available	870	Open in IMG/M
3300005332\|Ga0066388_103969717	Not Available	754	Open in IMG/M
3300005332\|Ga0066388_107144097	Not Available	561	Open in IMG/M
3300005436\|Ga0070713_101248586	Not Available	719	Open in IMG/M
3300005764\|Ga0066903_100499254	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300005764\|Ga0066903_101125362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1450	Open in IMG/M
3300005764\|Ga0066903_104160563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	774	Open in IMG/M
3300005764\|Ga0066903_104411913	Not Available	751	Open in IMG/M
3300005764\|Ga0066903_105883979	Not Available	643	Open in IMG/M
3300006046\|Ga0066652_100822939	Not Available	887	Open in IMG/M
3300006052\|Ga0075029_101272011	Not Available	516	Open in IMG/M
3300006057\|Ga0075026_100303202	Not Available	873	Open in IMG/M
3300006057\|Ga0075026_100723745	Not Available	597	Open in IMG/M
3300006059\|Ga0075017_100134456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	1750	Open in IMG/M
3300006755\|Ga0079222_10335414	Not Available	1011	Open in IMG/M
3300006804\|Ga0079221_11349372	Not Available	564	Open in IMG/M
3300006844\|Ga0075428_101453932	Not Available	719	Open in IMG/M
3300009792\|Ga0126374_10212487	Not Available	1234	Open in IMG/M
3300010047\|Ga0126382_10440723	Not Available	1029	Open in IMG/M
3300010048\|Ga0126373_10247866	Not Available	1751	Open in IMG/M
3300010048\|Ga0126373_12348069	Not Available	593	Open in IMG/M
3300010048\|Ga0126373_12535113	Not Available	572	Open in IMG/M
3300010358\|Ga0126370_10373424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1161	Open in IMG/M
3300010358\|Ga0126370_11609173	Not Available	622	Open in IMG/M
3300010359\|Ga0126376_11724519	Not Available	662	Open in IMG/M
3300010360\|Ga0126372_10523414	Not Available	1119	Open in IMG/M
3300010361\|Ga0126378_10826973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300010366\|Ga0126379_10409648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1406	Open in IMG/M
3300010366\|Ga0126379_11936015	Not Available	692	Open in IMG/M
3300010376\|Ga0126381_100421430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1865	Open in IMG/M
3300010376\|Ga0126381_100743031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1406	Open in IMG/M
3300010376\|Ga0126381_102458793	Not Available	747	Open in IMG/M
3300010376\|Ga0126381_102722280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300010398\|Ga0126383_10487253	Not Available	1289	Open in IMG/M
3300010398\|Ga0126383_11108680	Not Available	881	Open in IMG/M
3300012201\|Ga0137365_10771273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300012285\|Ga0137370_10455089	Not Available	780	Open in IMG/M
3300012356\|Ga0137371_11173790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Rc3b	574	Open in IMG/M
3300012362\|Ga0137361_11243379	Not Available	668	Open in IMG/M
3300012948\|Ga0126375_10439370	Not Available	955	Open in IMG/M
3300012971\|Ga0126369_10680160	Not Available	1105	Open in IMG/M
3300012971\|Ga0126369_11653880	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300016270\|Ga0182036_11709910	Not Available	531	Open in IMG/M
3300016270\|Ga0182036_11908029	Not Available	504	Open in IMG/M
3300016294\|Ga0182041_10705344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	895	Open in IMG/M
3300016294\|Ga0182041_12227290	Not Available	512	Open in IMG/M
3300016319\|Ga0182033_10667111	Not Available	908	Open in IMG/M
3300016319\|Ga0182033_11814102	Not Available	554	Open in IMG/M
3300016357\|Ga0182032_10147727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1735	Open in IMG/M
3300016357\|Ga0182032_10305342	Not Available	1258	Open in IMG/M
3300016357\|Ga0182032_10611176	Not Available	908	Open in IMG/M
3300016404\|Ga0182037_11737779	Not Available	556	Open in IMG/M
3300016422\|Ga0182039_10030205	All Organisms → cellular organisms → Bacteria → Proteobacteria	3473	Open in IMG/M
3300016422\|Ga0182039_11972304	Not Available	537	Open in IMG/M
3300016445\|Ga0182038_10329437	Not Available	1258	Open in IMG/M
3300016445\|Ga0182038_11043234	Not Available	725	Open in IMG/M
3300016445\|Ga0182038_11471607	Not Available	611	Open in IMG/M
3300016445\|Ga0182038_11663788	Not Available	575	Open in IMG/M
3300017970\|Ga0187783_10694933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	734	Open in IMG/M
3300017970\|Ga0187783_11039464	Not Available	590	Open in IMG/M
3300017974\|Ga0187777_10647506	Not Available	747	Open in IMG/M
3300021478\|Ga0210402_11991003	Not Available	507	Open in IMG/M
3300021559\|Ga0210409_10845541	Not Available	788	Open in IMG/M
3300021560\|Ga0126371_10660989	Not Available	1194	Open in IMG/M
3300025916\|Ga0207663_11240313	Not Available	600	Open in IMG/M
3300025928\|Ga0207700_10689267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300027874\|Ga0209465_10446306	Not Available	647	Open in IMG/M
3300030916\|Ga0075386_12160720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1153	Open in IMG/M
3300031231\|Ga0170824_104921997	Not Available	597	Open in IMG/M
3300031446\|Ga0170820_12322639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300031545\|Ga0318541_10384280	Not Available	784	Open in IMG/M
3300031681\|Ga0318572_10456028	Not Available	761	Open in IMG/M
3300031718\|Ga0307474_10584787	Not Available	879	Open in IMG/M
3300031724\|Ga0318500_10048619	Not Available	1790	Open in IMG/M
3300031747\|Ga0318502_10397399	Not Available	820	Open in IMG/M
3300031753\|Ga0307477_10051198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2840	Open in IMG/M
3300031768\|Ga0318509_10022797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2955	Open in IMG/M
3300031782\|Ga0318552_10045211	Not Available	2072	Open in IMG/M
3300031796\|Ga0318576_10259151	Not Available	821	Open in IMG/M
3300031797\|Ga0318550_10649549	Not Available	506	Open in IMG/M
3300031819\|Ga0318568_10666560	Not Available	647	Open in IMG/M
3300031833\|Ga0310917_10809432	Not Available	632	Open in IMG/M
3300031879\|Ga0306919_10537343	Not Available	902	Open in IMG/M
3300031897\|Ga0318520_10107447	Not Available	1574	Open in IMG/M
3300031912\|Ga0306921_10719950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1145	Open in IMG/M
3300031942\|Ga0310916_11300159	Not Available	598	Open in IMG/M
3300031945\|Ga0310913_10471680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300031945\|Ga0310913_10845953	Not Available	644	Open in IMG/M
3300031946\|Ga0310910_11396394	Not Available	539	Open in IMG/M
3300031947\|Ga0310909_10074655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2673	Open in IMG/M
3300031947\|Ga0310909_10205146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1639	Open in IMG/M
3300031954\|Ga0306926_11704405	Not Available	719	Open in IMG/M
3300031954\|Ga0306926_13038829	Not Available	500	Open in IMG/M
3300032001\|Ga0306922_11017359	Not Available	854	Open in IMG/M
3300032035\|Ga0310911_10388618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	807	Open in IMG/M
3300032035\|Ga0310911_10657121	Not Available	608	Open in IMG/M
3300032039\|Ga0318559_10149676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1059	Open in IMG/M
3300032055\|Ga0318575_10252509	Not Available	890	Open in IMG/M
3300032055\|Ga0318575_10528256	Not Available	599	Open in IMG/M
3300032059\|Ga0318533_10682237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300032064\|Ga0318510_10006048	Not Available	3278	Open in IMG/M
3300032076\|Ga0306924_11065275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	883	Open in IMG/M
3300032261\|Ga0306920_104022263	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	0.91%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.55%
Aquatic	Environmental → Aquatic	3.64%
Plants	Host-Associated → Plants	0.91%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.55%
Sediment	Environmental → Aquatic → Sediment	3.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.27%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_02971600	2170459014	Switchgrass, Maize And Mischanthus Litter	MDRHDQELLDKQMGRLSAPRNDGVIAVMLAVMFVVGMTIGVSAPK
Ga0066395_103753472	3300004633	Tropical Forest Soil	MDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0066683_108486731	3300005172	Soil	MDRRDQELLDKQMRSLTPPRNEGFIAVLLAAMFLVGMTLGSV
Ga0066388_1001835661	3300005332	Tropical Forest Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLVGMTLGS
Ga0066388_1003051581	3300005332	Tropical Forest Soil	MDRYDQELLDKQMRRLTQPENYGVIGVMLAAMFLVGVAIGGVV
Ga0066388_1010661653	3300005332	Tropical Forest Soil	MNRYDQELLDKQMRRLTQPENYGVIGVMLAAMFLVGVAIGGVV
Ga0066388_1029481843	3300005332	Tropical Forest Soil	MERHDRELLDKQMRKLTPPRNEGVIVVMLAVMFLVGLALGSVVSRE
Ga0066388_1039697172	3300005332	Tropical Forest Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGITVGGLLSTHQS
Ga0066388_1071440971	3300005332	Tropical Forest Soil	MNQRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLVGIALG
Ga0070713_1012485861	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRDQELLDKQMRRLGPPRNDGVIAVLLAAMFLVGMTLGSV
Ga0066903_1004992541	3300005764	Tropical Forest Soil	MDRREKELLDKQMRLLSAPRNDGVIVVMLAAMFLVGVAISGVVF
Ga0066903_1011253623	3300005764	Tropical Forest Soil	MNRRDEELLDKQMRRLTPPRHEGVIALMLAATFLVGMTLGSVLSP
Ga0066903_1041605632	3300005764	Tropical Forest Soil	DQDLLDKQMRRLDPPRNDGTIAVLLAATFLVGMAIGGVLL*
Ga0066903_1044119131	3300005764	Tropical Forest Soil	MGTSKMDRRDQDLLDKQMRRLTPPRHEGVIAVMLAAMFLVGMTLGSVLS
Ga0066903_1058839792	3300005764	Tropical Forest Soil	MDRRDQELLDKQMRRLTPPRNVGVIAVMLAAMFLVGMTLGSALSPDKS
Ga0066652_1008229391	3300006046	Soil	MDRRDQELLDKQMRRLTPPRNGGVIAVLLASMFLVGMTLGSV
Ga0075029_1012720111	3300006052	Watersheds	MDRRDQELLDKQMRRLTPPRNDGVIAMMLAAMFLVGMTLGGVLSAH
Ga0075026_1003032022	3300006057	Watersheds	MDRRDQELLNKQMRRLTPPRNEGVIAVLLAAMFLVGM
Ga0075026_1007237451	3300006057	Watersheds	MDRRDQELLDKQMRRLTPPRNDGVIVVLLVAMFLVGMTLGSVL
Ga0075017_1001344565	3300006059	Watersheds	MDRRDQELLDKQMRRLSAPRNDGVIAVMLAVMFVVGMTLGSVLSEPKT
Ga0079222_103354142	3300006755	Agricultural Soil	MDRRDQELLDKQMRRLSPPRNNGVIVVLLAAMFLVGMTLG
Ga0079221_113493722	3300006804	Agricultural Soil	MDRRDRELLDKQMRRLSPPRNDGVIAVMLAVMFVVGMTLGGVLSEP
Ga0075428_1014539321	3300006844	Populus Rhizosphere	MGTSKMDRRDQELLDKQMRRLVPPQNHGAIAVMLAAAMFLVGMALGSVLS
Ga0126374_102124872	3300009792	Tropical Forest Soil	MNRRDQELLDKQMRRLTPPRHEGVIALMLAAMFLIGMTF
Ga0126382_104407232	3300010047	Tropical Forest Soil	VCENVGDKKLGTSKMDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0126373_102478661	3300010048	Tropical Forest Soil	MNRRDQELLNKQMRRLTPPRNEGAIAVMLAAMFLIGITVGGLL
Ga0126373_123480691	3300010048	Tropical Forest Soil	MDRRDQELLDKQMRRLSPPRNDSVIAVMLAAMFLVGITIG
Ga0126373_125351131	3300010048	Tropical Forest Soil	MDRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGIT
Ga0126370_103734242	3300010358	Tropical Forest Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGITVGGL
Ga0126370_116091732	3300010358	Tropical Forest Soil	MDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVA
Ga0126376_117245192	3300010359	Tropical Forest Soil	MDQHDRELLDKQMRRLTQPENYGVIGVMLAVMFLVGM
Ga0126372_105234141	3300010360	Tropical Forest Soil	MNRRDQELLDKQMRRLEAPRINDGAIAVLLAAMFL
Ga0126378_108269731	3300010361	Tropical Forest Soil	VGDKKLGTSKMDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0126379_104096482	3300010366	Tropical Forest Soil	VGDKKLGTSKMDRYGEELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0126379_119360152	3300010366	Tropical Forest Soil	MDRRDQELLDKQMRRLTPPRNECAIAVMLAAMFLVGMALGGVLSPRQT
Ga0126381_1004214301	3300010376	Tropical Forest Soil	MNKNGDLKMDRRDQELLDKQMGRLSPPRNDGAIAVMFAAMFLVGMALGGVLS
Ga0126381_1007430311	3300010376	Tropical Forest Soil	MNRHDQELLDKQMRRLTPPQNDGAIAVMLAAMFLI
Ga0126381_1024587933	3300010376	Tropical Forest Soil	MAAFHLEWGHSEMNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGIT
Ga0126381_1027222801	3300010376	Tropical Forest Soil	RGRQKMGTSKMDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0126383_104872533	3300010398	Tropical Forest Soil	MNRRDQELLNKQMRRLTPPRNEGAIAVMLAAMFLIGITVGGLLSTHQSE
Ga0126383_111086803	3300010398	Tropical Forest Soil	MGTSKMDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL*
Ga0137365_107712731	3300012201	Vadose Zone Soil	MGTLKMDRRDQELLDKQMRRLIPQRNDGVIAVLLAAMFLVGMTLGGVLS
Ga0137370_104550891	3300012285	Vadose Zone Soil	MNTNGDIKMDRRDQELLDKQMRRLTPPRNDGVIAVLFAAMFLVGMTLGS
Ga0137371_111737902	3300012356	Vadose Zone Soil	LDKQMRRLTPPRIDGVFAVMLAAMFLVGMTLGGVLKADDQRIIVF*
Ga0137361_112433791	3300012362	Vadose Zone Soil	METKMGTSKMDRRDQELLDKQMRRLVPPQNDGAIAVMLAAAMFLVGMALGSVL
Ga0126375_104393702	3300012948	Tropical Forest Soil	MNQRDQELLDKQMRRLTPPRNEGVVALMLAAMFLFGVTLGSVLSP
Ga0126369_106801603	3300012971	Tropical Forest Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGITVG
Ga0126369_116538801	3300012971	Tropical Forest Soil	MNRRDQELLDKQMRKLTPPRNEGAIAVMLAAMFLIGI
Ga0182036_117099102	3300016270	Soil	MDRRDQELLDKQMRRLTPPRHEGVIAVMLATMFLVGIAI
Ga0182036_119080291	3300016270	Soil	MGTKKMDRRDQELFDKQMRRLTPPRHEGVIALMLAVMFL
Ga0182041_107053442	3300016294	Soil	MNKNGDAKMDRRDQELLDKQMRRLTPPRHEGVIAVMLAAMFLVGMTLGPVLTLPCAGRR
Ga0182041_122272901	3300016294	Soil	MNRHHRELLDKQMRRLTPPRHEGVIALMLAAMFLVGMTLGG
Ga0182033_106671111	3300016319	Soil	MNRHDQELLDKQMRRLTPPRNGGVIAAMLAVMFLFG
Ga0182033_118141022	3300016319	Soil	MVRRDQELLDKQMRRLTPPRNDGAIAVMLATMFLVGMTLGSVLS
Ga0182032_101477273	3300016357	Soil	MNRQDQELLDKQMRRLTPPQNDGAIAVMLAAMFLIGIT
Ga0182032_103053421	3300016357	Soil	MNRHDQELLDKQMRRLTPPRNGGVIAAMLAVMFLFGMTLGSVLSPH
Ga0182032_106111761	3300016357	Soil	MERHDRELLDKQMGKLTPPRNEGVIVVMLAVMFLVGLALGSVVSHE
Ga0182037_117377791	3300016404	Soil	MNRHHRELLDKQMRRLTPPRHEGVIALMLAAMFLVGMTLG
Ga0182039_100302056	3300016422	Soil	MGTSKMDRRDQELLDKQMRRLSPPRSDGAIAVLLAALFLVGMGVGGVLSTHQS
Ga0182039_119723041	3300016422	Soil	MGTAKMDRRDRELLNKQMRVLSAPRNDGVIAVMLAAM
Ga0182038_103294373	3300016445	Soil	MDRRDQELLDKQMRRLTPPRNEVVIAVLLASMFLVGMTLGGVLS
Ga0182038_110432342	3300016445	Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGITV
Ga0182038_114716072	3300016445	Soil	MNRHDQELLDKQMRRLSPPRNEGVVVVMLATMFLFGMALGSVMS
Ga0182038_116637882	3300016445	Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLVGMALGS
Ga0187783_106949331	3300017970	Tropical Peatland	MNRYDQELLDKQMRRLGPPRNDGANAVLLVATFLVGAALGGV
Ga0187783_110394642	3300017970	Tropical Peatland	MDQYDQELLDKEMRRLTPPRNDGAIAGLLVVTFLVGAAFGGVLSAR
Ga0187777_106475062	3300017974	Tropical Peatland	MDQYDQELLDKEMRRLTPPRNDGAIAGLLVVTFLVGAAFGGVLSAH
Ga0210402_119910033	3300021478	Soil	RRDQELLDKQMRRLTPPRNDGVIVVMLAVMFDAACVT
Ga0210409_108455412	3300021559	Soil	MDRRDWELLDKQMRRLTPPRNDGAIAMMLAAMFLLGMTLGGVLP
Ga0126371_106609893	3300021560	Tropical Forest Soil	MDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIG
Ga0207663_112403131	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGTSKMDRRDQELLDKQMRRLVPPQNDGAIAVMLAAAMF
Ga0207700_106892671	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDRRDQELLDKQMRRLGPPRNDGVIAVLLAAMFLVGMTLGSVL
Ga0209465_104463061	3300027874	Tropical Forest Soil	MDRYGQELLDKQMRRLEPPENYGAIAVLLAATFLVGVAIGSVL
Ga0075386_121607203	3300030916	Soil	MDRRDQKLLDKQMRRLTPPRNDGVFAVLLAAVFLVGMTLGSVL
Ga0170824_1049219972	3300031231	Forest Soil	MDRRDQELLDKQMRRLTPPRNDGVIAVLLAAMFLVGMTLGGVLS
Ga0170820_123226392	3300031446	Forest Soil	MDRRDQELLDKQMRRLSPPRNDGVIAVLLAVMFLVGMT
Ga0318541_103842801	3300031545	Soil	MDRRDQELLDKQMRRLTPPRNEGVVALMLAAMFLVGVTLG
Ga0318572_104560281	3300031681	Soil	MDRRDQELLDKQMRRLTPPRNEGVIAVMLAAMFLVGMTLGSVL
Ga0307474_105847873	3300031718	Hardwood Forest Soil	VAAPRELLDKQMRRLTPPRNDGVIAVMLAAMFLVGM
Ga0318500_100486192	3300031724	Soil	MNRRDQELLNKQMRRLTPPRNEGAIAVMLAAMFLI
Ga0318502_103973991	3300031747	Soil	MDRRDQELLDKQMRRLTPPRHEGVIALMLAAMFLVGMTLG
Ga0307477_100511985	3300031753	Hardwood Forest Soil	MDRRDQELLDKQMRRLTPPRNEGVIAVLLAAMFLVGMTLGGVLL
Ga0318509_100227976	3300031768	Soil	MNRRDQELLDKQMARLTPPRNEGAIALMLAAMFLV
Ga0318552_100452114	3300031782	Soil	MNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGITVGGLLSTH
Ga0318576_102591513	3300031796	Soil	MHRYDWELLDKQTRRLSPPRNDGVIAVMLAAMFLVGIAIG
Ga0318550_106495491	3300031797	Soil	MNRRDQELLDKQMRRLETPRNDGAIAVLLAAMFVVGMTLGS
Ga0318568_106665601	3300031819	Soil	MDRRDQELLDKQMRRLTPPRHEGVIAVMLATMFLVGIAIG
Ga0310917_108094322	3300031833	Soil	MDRRDQELLDKQMRRLTPPRNESVVALMLAAMFLVGVTLGSVLSP
Ga0306919_105373431	3300031879	Soil	MDRRDQELLDKQMRRLTPPRNDGAIAVMVAAMFLIGMTVGS
Ga0318520_101074473	3300031897	Soil	MDRRDQELLDKQMRRLSPPRNDGAVAVMLAAMFLVGITIGSV
Ga0306921_107199501	3300031912	Soil	MGTSKMNRRDQELLDKQMRRLTPPRNEGAIAVMLAAMFLIGIT
Ga0310916_113001591	3300031942	Soil	MKQNGDVKMNRRDQELLDKQMARLTPPGNEGAIALMLAAMFLVGVTLGGVLS
Ga0310913_104716803	3300031945	Soil	MDRRDQELLDKQMRRLTPPRHEGVIALMLAAMFLVGIT
Ga0310913_108459531	3300031945	Soil	MDRRDQELLDKQMRRLSPPRNDSVIAVMLAAMFLVGITIGSVLSPAHQS
Ga0310910_113963941	3300031946	Soil	MDRRDQELLDKQMRRLTPPRHEGVIAVMLATMFLVGIAIGSVLSPH
Ga0310909_100746551	3300031947	Soil	MGTSKMDRRDQELLDKQMRRLSPPRSDGAIAVLLAALFLVGM
Ga0310909_102051461	3300031947	Soil	MDRRDQELLDKQMRRLTPPRNEVVIAVLLASMFLVG
Ga0306926_117044051	3300031954	Soil	MNRHHRELLDKQMRRLTPPRHEGVIALMLAAMFLVGMTL
Ga0306926_130388292	3300031954	Soil	MDRRDQELLDKQMRRLTPPRNEGVIAVLLASMFLVGM
Ga0306922_110173592	3300032001	Soil	MNRHDRELLDKQMRRLTPPRNEGAIAVMLAAMFLIG
Ga0310911_101626554	3300032035	Soil	MGTSKMNRRDQELLDKQMRRLTPPQNEGAIAVMLAA
Ga0310911_103886181	3300032035	Soil	MDRRDQELLDKQMRRLTPPRHEGVIAVMLATMFLVGIA
Ga0310911_106571211	3300032035	Soil	MDRHDRKLLDKQMGKLTPPRNEGVIVVMLAVMFLVGLALGSVVSR
Ga0318559_101496763	3300032039	Soil	MNRRDQELLDKQMRRLTPPRNEGAITVMLAAMFLIGITVGGL
Ga0318575_102525092	3300032055	Soil	MDRRDQELLDKQMRRLTPPRNESVVALMLAAMFLVGVT
Ga0318575_105282561	3300032055	Soil	MDRYDRELLNKQMRRLSAPRNDGVIAVLLAVMFLVGVTLGGVLSE
Ga0318533_106822372	3300032059	Soil	MNKNGDAKMDRRDQELLDKQMRRLTPSRHEGVIAVMLAAMFLVGMTLGSVLSP
Ga0318510_100060486	3300032064	Soil	MNRRDQELLNKQMRRLTPPRNEGAIAVMLAAMFLIAITVGGLL
Ga0306924_110652752	3300032076	Soil	MNRHDQELLDKQMRRLTPPQNDGAIAVMLAAMFLIGITVGGLLSTH
Ga0306920_1040222632	3300032261	Soil	MNKNGDVKMDRRDQELLDKQMRRLTPPRHEGVIALMLAAMFLVGVTLGSVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087005

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences