NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087015

Metagenome / Metatranscriptome Family F087015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087015
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 40 residues
Representative Sequence MDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLV
Number of Associated Samples 78
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.36 %
% of genes near scaffold ends (potentially truncated) 96.36 %
% of genes from short scaffolds (< 2000 bps) 74.55 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (36.364 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(63.636 % of family members)
Environment Ontology (ENVO) Unclassified
(80.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.727 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 75.61%    β-sheet: 0.00%    Coil/Unstructured: 24.39%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF16778Phage_tail_APC 33.64
PF13884Peptidase_S74 10.91
PF13385Laminin_G_3 5.45
PF10282Lactonase 0.91
PF12236Head-tail_con 0.91



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.73 %
UnclassifiedrootN/A36.36 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10114050Not Available959Open in IMG/M
3300001957|GOS2250_1011181All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300005512|Ga0074648_1094911All Organisms → Viruses → Predicted Viral1067Open in IMG/M
3300006025|Ga0075474_10096380All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.958Open in IMG/M
3300006027|Ga0075462_10006357All Organisms → cellular organisms → Bacteria3831Open in IMG/M
3300006027|Ga0075462_10007841All Organisms → Viruses3465Open in IMG/M
3300006752|Ga0098048_1013735All Organisms → Viruses → Predicted Viral2803Open in IMG/M
3300006790|Ga0098074_1160287All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.574Open in IMG/M
3300006802|Ga0070749_10157732Not Available1317Open in IMG/M
3300006802|Ga0070749_10499493Not Available663Open in IMG/M
3300006802|Ga0070749_10592984All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.598Open in IMG/M
3300006810|Ga0070754_10229439All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium855Open in IMG/M
3300006810|Ga0070754_10346460All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.658Open in IMG/M
3300006810|Ga0070754_10423163All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.580Open in IMG/M
3300006868|Ga0075481_10160132All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300006868|Ga0075481_10270191All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.596Open in IMG/M
3300006869|Ga0075477_10320074All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.613Open in IMG/M
3300006869|Ga0075477_10327922All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.604Open in IMG/M
3300006870|Ga0075479_10098388Not Available1215Open in IMG/M
3300006874|Ga0075475_10011710All Organisms → Viruses → Predicted Viral4412Open in IMG/M
3300006916|Ga0070750_10432868Not Available546Open in IMG/M
3300006919|Ga0070746_10522255Not Available518Open in IMG/M
3300006920|Ga0070748_1219211Not Available691Open in IMG/M
3300007276|Ga0070747_1102960All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300007344|Ga0070745_1057662Not Available1583Open in IMG/M
3300007345|Ga0070752_1011937Not Available4624Open in IMG/M
3300007345|Ga0070752_1024839Not Available2982Open in IMG/M
3300007346|Ga0070753_1043821All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1866Open in IMG/M
3300007346|Ga0070753_1207755All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.722Open in IMG/M
3300007346|Ga0070753_1208036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium722Open in IMG/M
3300007346|Ga0070753_1309170All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.563Open in IMG/M
3300007346|Ga0070753_1371767Not Available501Open in IMG/M
3300007363|Ga0075458_10247855Not Available543Open in IMG/M
3300007539|Ga0099849_1291929All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon590Open in IMG/M
3300007640|Ga0070751_1317401All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.578Open in IMG/M
3300009071|Ga0115566_10666923Not Available578Open in IMG/M
3300009124|Ga0118687_10141316Not Available855Open in IMG/M
3300009433|Ga0115545_1212690All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.657Open in IMG/M
3300010299|Ga0129342_1324343Not Available527Open in IMG/M
3300010300|Ga0129351_1366059All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.540Open in IMG/M
3300010318|Ga0136656_1284213Not Available540Open in IMG/M
3300012920|Ga0160423_10066558All Organisms → cellular organisms → Bacteria2584Open in IMG/M
3300012920|Ga0160423_10607480Not Available741Open in IMG/M
3300016737|Ga0182047_1573384Not Available706Open in IMG/M
3300017709|Ga0181387_1083736All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.646Open in IMG/M
3300017756|Ga0181382_1123426All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.688Open in IMG/M
3300017781|Ga0181423_1000090Not Available38455Open in IMG/M
3300017951|Ga0181577_10104989All Organisms → Viruses → Predicted Viral1954Open in IMG/M
3300017951|Ga0181577_10148105All Organisms → Viruses → Predicted Viral1598Open in IMG/M
3300017951|Ga0181577_10204966All Organisms → cellular organisms → Bacteria → Proteobacteria1316Open in IMG/M
3300017985|Ga0181576_10134174All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300017985|Ga0181576_10900994Not Available518Open in IMG/M
3300018417|Ga0181558_10244838All Organisms → Viruses → Predicted Viral1003Open in IMG/M
3300018421|Ga0181592_10176929unclassified Hyphomonas → Hyphomonas sp.1610Open in IMG/M
3300019765|Ga0194024_1017322All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla1526Open in IMG/M
3300019765|Ga0194024_1136233Not Available572Open in IMG/M
3300020056|Ga0181574_10334025Not Available908Open in IMG/M
3300020417|Ga0211528_10060503Not Available1615Open in IMG/M
3300020442|Ga0211559_10013321All Organisms → Viruses → Predicted Viral4222Open in IMG/M
3300021356|Ga0213858_10420934All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium625Open in IMG/M
3300021371|Ga0213863_10392771All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.562Open in IMG/M
3300021425|Ga0213866_10378734Not Available694Open in IMG/M
3300021957|Ga0222717_10025948All Organisms → cellular organisms → Bacteria3894Open in IMG/M
3300021958|Ga0222718_10081393All Organisms → Viruses → Predicted Viral1952Open in IMG/M
3300021959|Ga0222716_10455322Not Available730Open in IMG/M
3300022065|Ga0212024_1018545All Organisms → Viruses → Predicted Viral1118Open in IMG/M
3300022065|Ga0212024_1054417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium704Open in IMG/M
3300022069|Ga0212026_1021436All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300022071|Ga0212028_1026322All Organisms → Viruses → Predicted Viral1043Open in IMG/M
3300022158|Ga0196897_1038265All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.573Open in IMG/M
3300022159|Ga0196893_1019300All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.625Open in IMG/M
3300022176|Ga0212031_1052472All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage686Open in IMG/M
3300022183|Ga0196891_1003077All Organisms → Viruses3562Open in IMG/M
3300022187|Ga0196899_1131253All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.712Open in IMG/M
3300022187|Ga0196899_1214141All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.505Open in IMG/M
3300023117|Ga0255757_10053359All Organisms → Viruses → Predicted Viral2692Open in IMG/M
3300025093|Ga0208794_1006308All Organisms → Viruses → Predicted Viral3388Open in IMG/M
3300025128|Ga0208919_1246745All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.519Open in IMG/M
3300025610|Ga0208149_1044587Not Available1165Open in IMG/M
3300025610|Ga0208149_1142633All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.551Open in IMG/M
3300025630|Ga0208004_1075098Not Available849Open in IMG/M
3300025653|Ga0208428_1032662All Organisms → cellular organisms → Bacteria → Proteobacteria1654Open in IMG/M
3300025653|Ga0208428_1167930Not Available578Open in IMG/M
3300025655|Ga0208795_1010339All Organisms → Viruses → Predicted Viral3333Open in IMG/M
3300025671|Ga0208898_1033892Not Available2045Open in IMG/M
3300025671|Ga0208898_1128378All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.719Open in IMG/M
3300025671|Ga0208898_1143155All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium657Open in IMG/M
3300025674|Ga0208162_1005356All Organisms → cellular organisms → Bacteria → Proteobacteria5941Open in IMG/M
3300025687|Ga0208019_1179947Not Available570Open in IMG/M
3300025751|Ga0208150_1044602All Organisms → Viruses → Predicted Viral1523Open in IMG/M
3300025751|Ga0208150_1174781Not Available672Open in IMG/M
3300025759|Ga0208899_1017145All Organisms → Viruses3739Open in IMG/M
3300025759|Ga0208899_1036648All Organisms → Viruses → Predicted Viral2235Open in IMG/M
3300025769|Ga0208767_1054296All Organisms → Viruses → Predicted Viral1846Open in IMG/M
3300025769|Ga0208767_1087079All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1293Open in IMG/M
3300025803|Ga0208425_1038069Not Available1227Open in IMG/M
3300025818|Ga0208542_1000581Not Available16656Open in IMG/M
3300025818|Ga0208542_1002325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7638Open in IMG/M
3300025818|Ga0208542_1027853All Organisms → Viruses → Predicted Viral1860Open in IMG/M
3300025828|Ga0208547_1020418All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2687Open in IMG/M
3300025853|Ga0208645_1033178Not Available2652Open in IMG/M
3300025853|Ga0208645_1240693Not Available610Open in IMG/M
3300034374|Ga0348335_035382All Organisms → Viruses → Predicted Viral2123Open in IMG/M
3300034375|Ga0348336_050791All Organisms → Viruses → Predicted Viral1709Open in IMG/M
3300034375|Ga0348336_204507All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium523Open in IMG/M
3300034418|Ga0348337_005538Not Available8265Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous63.64%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh9.09%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.64%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.64%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.64%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.73%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.73%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.82%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.82%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.82%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.82%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.91%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.91%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001957Marine microbial communities from Wolf Island, Equador - GS035EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300016737Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017781Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020056Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022159Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300023117Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaGEnvironmentalOpen in IMG/M
3300025093Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1011405033300000117MarineMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGAW
GOS2250_101118113300001957MarineMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLGHWYTLV
Ga0074648_109491113300005512Saline Water And SedimentMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQWYS
Ga0075474_1009638013300006025AqueousMDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLGQWYG
Ga0075462_1000635773300006027AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWYGL
Ga0075462_1000784113300006027AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWYGLVADI
Ga0098048_101373543300006752MarineMDPLSLVAMASTAFKGVEVLVSRGAELEHVAKKLGQWYGFVSD
Ga0098074_116028723300006790MarineVDPVSLVAIASSTFKGIQVLVSKGAEIEHVAQKLGHW
Ga0070749_1015773233300006802AqueousMASTTFKGLQVLVSKGAEIERVAQKLGHWYTLVSD
Ga0070749_1049949313300006802AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDI
Ga0070749_1059298423300006802AqueousMDPLSLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHWY
Ga0070754_1022943923300006810AqueousVDPLSLVAMASTAFKGIEVLVSRGAEIEHVAQKLGHWY
Ga0070754_1034646023300006810AqueousVDPLSLVAMASTAFKGVEILVSRGAEIEHVAQKLGHWY
Ga0070754_1042316313300006810AqueousMDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWYGLV
Ga0075476_1013173533300006867AqueousMDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLGHWYGLVSDIKEAE
Ga0075481_1016013233300006868AqueousMDPLSLVALASSSFKGVQILVSKGAEIEHVAQKLGHWYGLVS
Ga0075481_1027019123300006868AqueousMDPLSLVAMASTAFKGIEVLVSRGAEIEHVAQKLGHWYGF
Ga0075477_1032007423300006869AqueousMDPVSLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHWYGLV
Ga0075477_1032792213300006869AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVS
Ga0075479_1009838823300006870AqueousVDPLSLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHW
Ga0075475_1001171023300006874AqueousVDPLSLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHWYSF
Ga0070750_1043286813300006916AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLV
Ga0070746_1052225533300006919AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGAWYS
Ga0070748_121921133300006920AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGAWY
Ga0070747_110296013300007276AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGA
Ga0070745_105766243300007344AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWYGLVADIKEA
Ga0070745_125208923300007344AqueousMDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLGHWYGLVSDIKEAEK
Ga0070752_101193713300007345AqueousMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDINQ
Ga0070752_102483943300007345AqueousMDPLSLVAIASSAFKGLEVLVSRGAEIEHVAKKLGHWYGLVAD
Ga0070753_104382113300007346AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHW
Ga0070753_120775523300007346AqueousVDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWYGLVSDL
Ga0070753_120803623300007346AqueousVDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLG
Ga0070753_130917023300007346AqueousMDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWY
Ga0070753_137176713300007346AqueousMDPLSMVAMASTAFKMVEGMVARGSEIEHVAQKLGQWFTI
Ga0075458_1024785523300007363AqueousMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDI
Ga0099849_129192933300007539AqueousMDPVSLVAIASSTFKGIQVLVSKGAEIEHVAQKLGHWYGLV
Ga0070751_131740123300007640AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLGHWYTLVS
Ga0115566_1066692333300009071Pelagic MarineMDPLSLIAMASTTFKGIQTLVDKGAEIEHVAQKLGH
Ga0118687_1014131613300009124SedimentMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLGHWY
Ga0115545_121269013300009433Pelagic MarineMDPLSLVAMASTAFKGVQVLVDRGAEIEHVAKKLGQWYT
Ga0129342_132434313300010299Freshwater To Marine Saline GradientMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDINQA
Ga0129351_136605923300010300Freshwater To Marine Saline GradientMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSD
Ga0136656_128421313300010318Freshwater To Marine Saline GradientMLAMAGTVVKGIEGLVARGAEIEKVAVKLGQWYTLASDIA
Ga0160423_1006655853300012920Surface SeawaterMDPLSLIALASSSFRGVQLLVNKGAEIEQVAQQLGKWFSYASD
Ga0160423_1060748013300012920Surface SeawaterMIAMASTTFKGIQTLVNQGAEIERVAQKLGSWYSYAAD
Ga0182047_157338433300016737Salt MarshMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQWYSFAAD
Ga0181387_108373613300017709SeawaterMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLGH
Ga0181382_104188733300017756SeawaterMDPVSLVAMASTAFKGVEVLVSRGAEIEHVAKKLGQWYGFVSDLREAEK
Ga0181382_112342613300017756SeawaterMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLG
Ga0181423_1000090513300017781SeawaterMDPLSLVAMASTAFKGVEVLVSRGAEIEHVAKKLG
Ga0181577_1010498913300017951Salt MarshMIAMASTTFKGIQTLVNKGAEIEHVAQKLGAWYSYAAD
Ga0181577_1014810533300017951Salt MarshMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDIN
Ga0181577_1020496653300017951Salt MarshMDPLSMIAMASTTFKGIQTLVNKGAEIEHVAQKLGAWY
Ga0181576_1013417413300017985Salt MarshMDPLSLIAMASTTFKGIQTLVNKGAEIEAVAQKLGQW
Ga0181576_1090099423300017985Salt MarshMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSD
Ga0181558_1024483813300018417Salt MarshLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHWYSFVSDLREAE
Ga0181592_1017692953300018421Salt MarshMDPLSLIAMASTTFKGIQTLVERGAEIESVAQKLGAWYTF
Ga0194024_101732213300019765FreshwaterMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQWYSFA
Ga0194024_113623313300019765FreshwaterMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQWY
Ga0181574_1033402543300020056Salt MarshMDPLSLIAMASTTFKGIQMMVNKGAEIEAVAQKLGQWY
Ga0211528_1006050353300020417MarineMDPLSMIAMASTTFKGIQTLVNQGAEIEAVAQKLGAWYS
Ga0211559_1001332113300020442MarineMDPLSLIAMASTTFKGIQTLVNKGAEIEHVAQKLGQWYSFAS
Ga0213858_1042093413300021356SeawaterVDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLG
Ga0213863_1039277113300021371SeawaterMDPLSLVAMASTAFKGVEVLVSKGAEIEHVAKKLGQWYGFVSDLREA
Ga0213866_1037873423300021425SeawaterMDPLSLIAMASTTFKGIQTLVNKGAEIEHVAQKLG
Ga0222717_1002594813300021957Estuarine WaterMDPLSLIAMASTTFKGIQTLVERGAEIEAVAQKFGAWY
Ga0222718_1008139313300021958Estuarine WaterVDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLGQWYTLAS
Ga0222716_1045532223300021959Estuarine WaterMDPLSLVAMASTAFKGIEVLVSRGAEIEQVAQKLG
Ga0222715_1012690513300021960Estuarine WaterMDPLSLVAMASTTFKGLQVLVSRGAEIEHVAQKLGHWYTLVSDINQAEK
Ga0212024_101854513300022065AqueousVDPVSLVAMASTAFKGVQVLVSRGAEIEHVAQKLGQWYGLVSDLR
Ga0212024_105441733300022065AqueousMDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLGH
Ga0212026_102143633300022069AqueousMASTAFKGVQVLVSKGAEIEHVAQKLGQWYTLASD
Ga0212028_102632213300022071AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQW
Ga0196897_103826513300022158AqueousMDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLGHWYGLV
Ga0196893_101930013300022159AqueousVDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWYGLG
Ga0212031_105247213300022176AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEHVAQKLGQWYSFAS
Ga0196891_100307743300022183AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWYGLVADIREAEK
Ga0196899_113125313300022187AqueousMDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWYGL
Ga0196899_121414123300022187AqueousMDPLSLVAMASTAFKGIEVLVSRGAEIEQVAQKLGHWYGLVSD
Ga0255757_1005335923300023117Salt MarshMDPLSMVAMASTAFKMVEGMVARGSEIEHVAQKLGQWFTIV
Ga0208794_100630833300025093MarineVDPVSLVAIASSTFKGIQVLVSKGAEIEHVAQKLGHWYGLV
Ga0208919_124674513300025128MarineMDPLSLVALASSSFRGVQLLVNKGAEIEQVAQQLGKWFSYASD
Ga0208149_104458713300025610AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHFYGLVADIKETER
Ga0208149_114263313300025610AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEQVAQKLGHWYGLVSDLREA
Ga0208004_107509813300025630AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDINQ
Ga0208428_103266233300025653AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLG
Ga0208428_116793013300025653AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAQKLGHW
Ga0208795_101033913300025655AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEQVAQKLGHWYGL
Ga0208898_103389213300025671AqueousMDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLGQWYGL
Ga0208898_112837823300025671AqueousMDPLSLVAMASTTFKGLQILVSKGAEIEHVAQKLGHWYGLVS
Ga0208898_114315513300025671AqueousVDPLSLVAMASTAFKGIEVLVSRGAEIEHVAQKLGHWYS
Ga0208162_100535613300025674AqueousMDPLSLVAMASTTFKGLQVLVSRGAEIEHVAQKLGHWYTLV
Ga0208019_117994713300025687AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEHVAQKLGQWYSF
Ga0208150_104460213300025751AqueousMDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLGHW
Ga0208150_117478133300025751AqueousMDPLSLVAMASTTFKGLQVLVSKGAEIEHVAKKLGHWYTL
Ga0208899_101714543300025759AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWYGLVA
Ga0208899_103664833300025759AqueousMDPLSLIAMASTTFKGIQTLVNQGAEIESVAQKLGQWYRFAS
Ga0208767_105429633300025769AqueousMDPLSLIAMASTTFKGIQTLVNQGAEIESVAQKLGQWYRFASD
Ga0208767_108707933300025769AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLG
Ga0208425_103806933300025803AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGH
Ga0208542_100058113300025818AqueousMDPLSLIAMASTTFKGIQTLVERGAEIEAVAQKLGAWYSFA
Ga0208542_100232593300025818AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHWY
Ga0208542_102785313300025818AqueousMASTAFKGVEILVSRGAEIEHVAQKLGHWYGFVSDLREAEKE
Ga0208547_102041853300025828AqueousMDPVSLVAMASTAFKGVQVLVSKGAEIEHVAQKLGQW
Ga0208645_103317813300025853AqueousMDPLSLVAIASSAFKGLEVLVSKGAEIEHVAKKLGHFYGLVADI
Ga0208645_124069323300025853AqueousVDPLSLVAMASTAFKGVEVLVSRGVEIEQVAQKLGHWYGLVSDLREAEK
Ga0348335_035382_1_1083300034374AqueousMDPLSLIAMASTTFKGIQTLVNRGAEIEAVAQKLGQ
Ga0348336_050791_1_1263300034375AqueousMDPVSLVAMASTTFKGVQILVSKGAEIEHVAQKLGHWYGLVS
Ga0348336_204507_2_1063300034375AqueousMDPLSMLAMASTVVKGIEGLVARGAEIEKVATKLG
Ga0348337_005538_8141_82633300034418AqueousMASTTFKGLQVLVSKGAEIEHVAQKLGHWYTLVSDINQAER


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