Basic Information | |
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Family ID | F087143 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 110 |
Average Sequence Length | 90 residues |
Representative Sequence | MNSEGRTEVIGPFSITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAA |
Number of Associated Samples | 98 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 65.14 % |
% of genes near scaffold ends (potentially truncated) | 32.73 % |
% of genes from short scaffolds (< 2000 bps) | 79.09 % |
Associated GOLD sequencing projects | 89 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (50.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (10.909 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.818 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (23.636 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 19.05% β-sheet: 21.43% Coil/Unstructured: 59.52% | Feature Viewer |
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Powered by Feature Viewer |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF13472 | Lipase_GDSL_2 | 5.45 |
PF04199 | Cyclase | 3.64 |
PF00582 | Usp | 1.82 |
PF04389 | Peptidase_M28 | 1.82 |
PF12706 | Lactamase_B_2 | 1.82 |
PF02515 | CoA_transf_3 | 1.82 |
PF03401 | TctC | 0.91 |
PF07331 | TctB | 0.91 |
PF04055 | Radical_SAM | 0.91 |
PF01786 | AOX | 0.91 |
PF02830 | V4R | 0.91 |
PF14319 | Zn_Tnp_IS91 | 0.91 |
PF13701 | DDE_Tnp_1_4 | 0.91 |
PF02566 | OsmC | 0.91 |
PF00211 | Guanylate_cyc | 0.91 |
PF00378 | ECH_1 | 0.91 |
PF05974 | DUF892 | 0.91 |
PF14497 | GST_C_3 | 0.91 |
PF02517 | Rce1-like | 0.91 |
PF00082 | Peptidase_S8 | 0.91 |
PF00202 | Aminotran_3 | 0.91 |
PF07311 | Dodecin | 0.91 |
PF01527 | HTH_Tnp_1 | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG1878 | Kynurenine formamidase | Amino acid transport and metabolism [E] | 3.64 |
COG1804 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases | Lipid transport and metabolism [I] | 1.82 |
COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 0.91 |
COG1719 | Predicted hydrocarbon binding protein, contains 4VR domain | General function prediction only [R] | 0.91 |
COG1764 | Organic hydroperoxide reductase OsmC/OhrA | Defense mechanisms [V] | 0.91 |
COG1765 | Uncharacterized OsmC-related protein | General function prediction only [R] | 0.91 |
COG2114 | Adenylate cyclase, class 3 | Signal transduction mechanisms [T] | 0.91 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.91 |
COG3360 | Flavin-binding protein dodecin | General function prediction only [R] | 0.91 |
COG3685 | Ferritin-like metal-binding protein YciE | Inorganic ion transport and metabolism [P] | 0.91 |
COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 0.91 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 50.00 % |
Unclassified | root | N/A | 50.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300003859|Ga0031653_10209045 | Not Available | 511 | Open in IMG/M |
3300004070|Ga0055488_10022818 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1180 | Open in IMG/M |
3300004155|Ga0066600_10172564 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 913 | Open in IMG/M |
3300004156|Ga0062589_102255208 | Not Available | 558 | Open in IMG/M |
3300004242|Ga0066601_10090761 | Not Available | 1089 | Open in IMG/M |
3300004479|Ga0062595_100519953 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 900 | Open in IMG/M |
3300004780|Ga0062378_10172480 | Not Available | 586 | Open in IMG/M |
3300005328|Ga0070676_10160245 | All Organisms → cellular organisms → Bacteria | 1447 | Open in IMG/M |
3300005338|Ga0068868_100036685 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 3797 | Open in IMG/M |
3300005340|Ga0070689_101689856 | Not Available | 576 | Open in IMG/M |
3300005347|Ga0070668_100511675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium | 1041 | Open in IMG/M |
3300005353|Ga0070669_101505536 | Not Available | 585 | Open in IMG/M |
3300005356|Ga0070674_100102711 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2085 | Open in IMG/M |
3300005564|Ga0070664_100084809 | All Organisms → cellular organisms → Bacteria | 2735 | Open in IMG/M |
3300005616|Ga0068852_100719720 | Not Available | 1009 | Open in IMG/M |
3300005718|Ga0068866_10137738 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1397 | Open in IMG/M |
3300005841|Ga0068863_100133508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 2371 | Open in IMG/M |
3300006624|Ga0101567_11431868 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 519 | Open in IMG/M |
3300006930|Ga0079303_10076759 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1227 | Open in IMG/M |
3300006930|Ga0079303_10190864 | Not Available | 817 | Open in IMG/M |
3300009037|Ga0105093_10681775 | Not Available | 588 | Open in IMG/M |
3300009075|Ga0105090_10022713 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3870 | Open in IMG/M |
3300009075|Ga0105090_10052067 | All Organisms → cellular organisms → Bacteria | 2558 | Open in IMG/M |
3300009081|Ga0105098_10795669 | Not Available | 510 | Open in IMG/M |
3300009085|Ga0105103_10060658 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium | 1923 | Open in IMG/M |
3300009131|Ga0115027_10622983 | Not Available | 798 | Open in IMG/M |
3300009147|Ga0114129_11811215 | All Organisms → cellular organisms → Bacteria | 742 | Open in IMG/M |
3300009167|Ga0113563_10079776 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2912 | Open in IMG/M |
3300009179|Ga0115028_10101545 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → unclassified Microbulbifer → Microbulbifer sp. YPW1 | 1631 | Open in IMG/M |
3300009527|Ga0114942_1025811 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1705 | Open in IMG/M |
3300009527|Ga0114942_1060529 | Not Available | 1182 | Open in IMG/M |
3300009789|Ga0126307_10408175 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1095 | Open in IMG/M |
3300010044|Ga0126310_11013032 | Not Available | 655 | Open in IMG/M |
3300011406|Ga0137454_1023822 | Not Available | 847 | Open in IMG/M |
3300011424|Ga0137439_1096339 | Not Available | 644 | Open in IMG/M |
3300011425|Ga0137441_1164675 | Not Available | 553 | Open in IMG/M |
3300011443|Ga0137457_1174110 | Not Available | 723 | Open in IMG/M |
3300011445|Ga0137427_10164242 | Not Available | 917 | Open in IMG/M |
3300013769|Ga0119887_1003392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 5600 | Open in IMG/M |
3300013769|Ga0119887_1051737 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1182 | Open in IMG/M |
3300014298|Ga0075341_1096099 | Not Available | 571 | Open in IMG/M |
3300014313|Ga0075347_1134875 | Not Available | 583 | Open in IMG/M |
3300014316|Ga0075339_1005285 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → Caldilineales → Caldilineaceae → Caldilinea → Caldilinea aerophila | 2750 | Open in IMG/M |
3300014316|Ga0075339_1025280 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1426 | Open in IMG/M |
3300014317|Ga0075343_1120071 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 620 | Open in IMG/M |
3300014326|Ga0157380_11876787 | Not Available | 659 | Open in IMG/M |
3300015258|Ga0180093_1057055 | Not Available | 893 | Open in IMG/M |
3300018055|Ga0184616_10059598 | Not Available | 1295 | Open in IMG/M |
3300018083|Ga0184628_10069409 | Not Available | 1791 | Open in IMG/M |
3300018469|Ga0190270_10594224 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1077 | Open in IMG/M |
3300018476|Ga0190274_10638145 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium | 1099 | Open in IMG/M |
3300018481|Ga0190271_10018466 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 5297 | Open in IMG/M |
3300018481|Ga0190271_11317615 | Not Available | 842 | Open in IMG/M |
3300018481|Ga0190271_13077495 | Not Available | 559 | Open in IMG/M |
3300018920|Ga0190273_10284146 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1095 | Open in IMG/M |
3300019356|Ga0173481_10232690 | Not Available | 819 | Open in IMG/M |
3300020048|Ga0207193_1574966 | Not Available | 749 | Open in IMG/M |
3300021082|Ga0210380_10448675 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 591 | Open in IMG/M |
3300021337|Ga0210341_1415586 | All Organisms → cellular organisms → Bacteria | 1137 | Open in IMG/M |
3300021346|Ga0210335_1109981 | All Organisms → cellular organisms → Bacteria | 884 | Open in IMG/M |
3300021859|Ga0210334_10747851 | Not Available | 842 | Open in IMG/M |
3300022384|Ga0210321_1060741 | Not Available | 554 | Open in IMG/M |
3300022396|Ga0210364_1166547 | Not Available | 516 | Open in IMG/M |
3300022549|Ga0212091_10345385 | Not Available | 613 | Open in IMG/M |
3300022894|Ga0247778_1144050 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 652 | Open in IMG/M |
3300025321|Ga0207656_10728111 | Not Available | 508 | Open in IMG/M |
3300025899|Ga0207642_10565169 | Not Available | 704 | Open in IMG/M |
3300025901|Ga0207688_10773964 | Not Available | 608 | Open in IMG/M |
3300025903|Ga0207680_10844636 | Not Available | 656 | Open in IMG/M |
3300025907|Ga0207645_10019805 | All Organisms → cellular organisms → Bacteria | 4406 | Open in IMG/M |
3300025925|Ga0207650_10402765 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Niveibacterium | 1133 | Open in IMG/M |
3300025972|Ga0207668_10199609 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter | 1592 | Open in IMG/M |
3300026075|Ga0207708_10288452 | All Organisms → cellular organisms → Bacteria | 1332 | Open in IMG/M |
3300026375|Ga0256803_1037327 | Not Available | 568 | Open in IMG/M |
3300027693|Ga0209704_1010136 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Lampyrinae → Lamprigera → Lamprigera yunnana | 2226 | Open in IMG/M |
3300027715|Ga0208665_10156691 | Not Available | 713 | Open in IMG/M |
3300027719|Ga0209467_1227164 | Not Available | 642 | Open in IMG/M |
3300027721|Ga0209492_1080656 | Not Available | 1148 | Open in IMG/M |
3300027721|Ga0209492_1085619 | Not Available | 1112 | Open in IMG/M |
3300027735|Ga0209261_10050995 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1039 | Open in IMG/M |
3300027871|Ga0209397_10414277 | Not Available | 661 | Open in IMG/M |
3300027890|Ga0209496_10221190 | Not Available | 912 | Open in IMG/M |
3300027899|Ga0209668_10060611 | Not Available | 2075 | Open in IMG/M |
3300027900|Ga0209253_10188285 | Not Available | 1654 | Open in IMG/M |
3300027975|Ga0209391_10048247 | All Organisms → cellular organisms → Bacteria | 2024 | Open in IMG/M |
3300027975|Ga0209391_10137663 | Not Available | 1053 | Open in IMG/M |
3300028420|Ga0210366_10238105 | Not Available | 707 | Open in IMG/M |
3300030499|Ga0268259_10104331 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 638 | Open in IMG/M |
3300031731|Ga0307405_10000540 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 14332 | Open in IMG/M |
3300031731|Ga0307405_10359338 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1126 | Open in IMG/M |
3300031824|Ga0307413_10070299 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 2200 | Open in IMG/M |
3300031852|Ga0307410_10097564 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2100 | Open in IMG/M |
3300031852|Ga0307410_11514165 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 591 | Open in IMG/M |
3300031903|Ga0307407_10040725 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 2593 | Open in IMG/M |
3300031911|Ga0307412_10003608 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium | 8597 | Open in IMG/M |
3300032002|Ga0307416_103200444 | Not Available | 548 | Open in IMG/M |
3300032002|Ga0307416_103271482 | Not Available | 542 | Open in IMG/M |
3300032004|Ga0307414_10933609 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium | 797 | Open in IMG/M |
3300032005|Ga0307411_11458171 | Not Available | 628 | Open in IMG/M |
3300032074|Ga0308173_10154948 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp. | 1858 | Open in IMG/M |
3300032126|Ga0307415_101783805 | Not Available | 595 | Open in IMG/M |
3300032263|Ga0316195_10008184 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5142 | Open in IMG/M |
3300033406|Ga0316604_10039945 | All Organisms → cellular organisms → Bacteria | 2412 | Open in IMG/M |
3300033408|Ga0316605_10157474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1855 | Open in IMG/M |
3300033413|Ga0316603_10568696 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1048 | Open in IMG/M |
3300033419|Ga0316601_100028457 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 3839 | Open in IMG/M |
3300033434|Ga0316613_10802940 | Not Available | 646 | Open in IMG/M |
3300033521|Ga0316616_102705374 | Not Available | 667 | Open in IMG/M |
3300033557|Ga0316617_101354952 | Not Available | 712 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 10.91% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 10.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.27% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 6.36% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 5.45% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 5.45% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 4.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 4.55% |
Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 3.64% |
Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 2.73% |
Groundwater | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater | 2.73% |
Freshwater | Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater | 2.73% |
Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 2.73% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.73% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.73% |
Wetland Sediment | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment | 1.82% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.82% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 1.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.82% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.82% |
Sewage Treatment Plant | Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant | 1.82% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.91% |
Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment | 0.91% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.91% |
Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment | 0.91% |
Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Sediment | 0.91% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.91% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.91% |
Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.91% |
Agave | Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave | 0.91% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300003859 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR | Environmental | Open in IMG/M |
3300004070 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 | Environmental | Open in IMG/M |
3300004155 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004242 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004780 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300006624 | Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1 | Environmental | Open in IMG/M |
3300006930 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC | Environmental | Open in IMG/M |
3300009009 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 | Environmental | Open in IMG/M |
3300009037 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
3300009075 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
3300009081 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
3300009085 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
3300009131 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 | Environmental | Open in IMG/M |
3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
3300009167 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2) | Environmental | Open in IMG/M |
3300009179 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 | Environmental | Open in IMG/M |
3300009527 | Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek | Environmental | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300011406 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2 | Environmental | Open in IMG/M |
3300011424 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2 | Environmental | Open in IMG/M |
3300011425 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2 | Environmental | Open in IMG/M |
3300011443 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2 | Environmental | Open in IMG/M |
3300011445 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2 | Environmental | Open in IMG/M |
3300013769 | Sewage treatment plant microbial communities from Vermont, USA - Sand_B | Engineered | Open in IMG/M |
3300014298 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300014313 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1 | Environmental | Open in IMG/M |
3300014316 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1 | Environmental | Open in IMG/M |
3300014317 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015258 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da | Environmental | Open in IMG/M |
3300018055 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex | Environmental | Open in IMG/M |
3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300018920 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS | Environmental | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300020048 | Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915 | Environmental | Open in IMG/M |
3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
3300021337 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021346 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300021859 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022384 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022396 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.633 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022549 | Cold Creek_combined assembly | Environmental | Open in IMG/M |
3300022894 | Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5 | Environmental | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026375 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 CS6 | Environmental | Open in IMG/M |
3300027693 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
3300027715 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes) | Environmental | Open in IMG/M |
3300027719 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes) | Environmental | Open in IMG/M |
3300027721 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes) | Environmental | Open in IMG/M |
3300027735 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes) | Environmental | Open in IMG/M |
3300027871 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
3300027890 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
3300027899 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes) | Environmental | Open in IMG/M |
3300027900 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes) | Environmental | Open in IMG/M |
3300027975 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes) | Environmental | Open in IMG/M |
3300028420 | Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030499 | Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2) | Host-Associated | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Host-Associated | Open in IMG/M |
3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032074 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1 | Environmental | Open in IMG/M |
3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
3300032263 | Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1 | Environmental | Open in IMG/M |
3300033406 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT | Environmental | Open in IMG/M |
3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
3300033413 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT | Environmental | Open in IMG/M |
3300033419 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT | Environmental | Open in IMG/M |
3300033434 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b | Environmental | Open in IMG/M |
3300033521 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B | Environmental | Open in IMG/M |
3300033557 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0031653_102090451 | 3300003859 | Freshwater Lake Sediment | MNPEGRTEVIGPYSITGYVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHGPAAGGAAPK* |
Ga0055488_100228182 | 3300004070 | Natural And Restored Wetlands | MDSEGRTEIIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPVASGTVPK* |
Ga0066600_101725642 | 3300004155 | Freshwater | EVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0062589_1022552081 | 3300004156 | Soil | MMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHAR |
Ga0066601_100907611 | 3300004242 | Freshwater | MNPEGRTEVIGPYSITGFVQYLSDVQVWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHVPAAEGTVPK* |
Ga0062595_1005199531 | 3300004479 | Soil | MMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0062378_101724802 | 3300004780 | Wetland Sediment | MNPEDRTEVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0070676_101602453 | 3300005328 | Miscanthus Rhizosphere | MSTEGEPLEGRTEVIGAFSISGGVRYLPDVQYWEPHVTVSRLDGKALPFVVPCGPECYRKSSAEAMNVGWATARMWLDGGKIPWHARSAGA* |
Ga0068868_1000366854 | 3300005338 | Miscanthus Rhizosphere | MSSEPDAADIRTEIIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0070689_1016898561 | 3300005340 | Switchgrass Rhizosphere | MMSSEPDAADFRTEVIGPYAIAGSVAYLADSQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0070668_1005116752 | 3300005347 | Switchgrass Rhizosphere | MSSEPDATDIRTEVIGPYAIAGSVSYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0070669_1015055362 | 3300005353 | Switchgrass Rhizosphere | AVIVPAPSPMLCCSFCVRVGRDAMSTAGESIDTRTELIGHFSITGGVSYLADVQLWEPRVTISRIDGKANPFVVPCGPECYRKSSAEAMNVGWVTARLWLDGGKIPWHARTPDT* |
Ga0070674_1001027112 | 3300005356 | Miscanthus Rhizosphere | MTMSTEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFIVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARAG* |
Ga0070664_1000848094 | 3300005564 | Corn Rhizosphere | MSTEGEPLEGRTEVIGAFSISGGVRYLPDVQYWEPHVTVSRLDGKALPFVVPCGPECYRKSSVEAMNVGWVTARLWLDGGKIPWHARTPDT* |
Ga0068852_1007197201 | 3300005616 | Corn Rhizosphere | NAMSTEGEPLEGRTEVIGAFSISGGVRYLPDVQYWEPHVTVSRLDGKALPFVVPCGPECYRKSSAEAMNVGWATARMWLDGGKIPWHARSAGA* |
Ga0068866_101377383 | 3300005718 | Miscanthus Rhizosphere | MTMSTEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFIVPCGPECYRKNSDEALMVGWATARQWLDGVRIPWHARAG* |
Ga0068863_1001335084 | 3300005841 | Switchgrass Rhizosphere | VSSEPDAADIRTEIIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0101567_114318681 | 3300006624 | Soil | DAVDIRTEIIGPYAIAGSVSYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG* |
Ga0079303_100767592 | 3300006930 | Deep Subsurface | MNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAALEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK* |
Ga0079303_101908642 | 3300006930 | Deep Subsurface | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGLAPK* |
Ga0105105_103958321 | 3300009009 | Freshwater Sediment | FVQYLSDVQLWEPRIVIARVDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAEGPVPK* |
Ga0105093_106817751 | 3300009037 | Freshwater Sediment | LYRLTAKRSAPAMNPEGRTEVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQESLMAGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0105090_100227132 | 3300009075 | Freshwater Sediment | MNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK* |
Ga0105090_100520672 | 3300009075 | Freshwater Sediment | MNPEGRTEVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQESLMAGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0105098_107956691 | 3300009081 | Freshwater Sediment | GRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK* |
Ga0105103_100606583 | 3300009085 | Freshwater Sediment | MNSEGRTEVIGAFSITGFVQYLSDVQVWEPRIVITRNDGAAQEFVVPCGPECYRKNSQEALVAGWAAARQWLDGGRIPWHAPAATGAAPK* |
Ga0115027_106229831 | 3300009131 | Wetland | MNSEGRKEVIGSFTITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK* |
Ga0114129_118112152 | 3300009147 | Populus Rhizosphere | NRSERYGDFVISGAVWYLPDVQLWEPRVQIARVDGAAQEFVVPCGPECYRKSSEEAFNAGWATARQWLDGGRIPWKAKAA* |
Ga0113563_100797762 | 3300009167 | Freshwater Wetlands | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0115028_101015453 | 3300009179 | Wetland | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGPAPK* |
Ga0114942_10258111 | 3300009527 | Groundwater | MNAEGRTEVIGPYSIAGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAG |
Ga0114942_10605291 | 3300009527 | Groundwater | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGTAREFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPAAAGAVPK* |
Ga0126307_104081751 | 3300009789 | Serpentine Soil | MSTARESLDARTELIGNFSITGGVSYLADVQLWEPHVTISRLDGKANPFVVPCGPECYRKNSAEALNVGWVTARLWLDGGKIPWHARSPDG* |
Ga0126310_110130321 | 3300010044 | Serpentine Soil | MSTAGESLDTRTELIGNFSITGGVSYLDDVQLWEPRVTISRLDGKANPFVVPCGPECYRKSSAEALNVGWVTARLWLDGGKIPWHARTPDS* |
Ga0137454_10238221 | 3300011406 | Soil | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGSAPK* |
Ga0137439_10963391 | 3300011424 | Soil | MNAEGRTEVIGPYSIAGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0137441_11646751 | 3300011425 | Soil | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAVGGAAPK* |
Ga0137457_11741101 | 3300011443 | Soil | MNAEGRTEVIGPYSITGFVQYLPDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK* |
Ga0137427_101642421 | 3300011445 | Soil | MNAESRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPAAASAVPK* |
Ga0119887_10033924 | 3300013769 | Sewage Treatment Plant | MNAEGRTEVIGPFSITGFVEYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMVGWAAARQWLNGGKIPWHATVATAQSQSDLRPQPKAH* |
Ga0119887_10517373 | 3300013769 | Sewage Treatment Plant | MDSEGRTEIIGAFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGRIPWHAPVAPGAVPK* |
Ga0075341_10960991 | 3300014298 | Natural And Restored Wetlands | MNAEGRKEVIGAFSITGFVQYLSDVQVWEPRVVIARIEGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKI |
Ga0075347_11348751 | 3300014313 | Natural And Restored Wetlands | MNAEGRKEVIGAFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPAATGVVPK* |
Ga0075339_10052851 | 3300014316 | Natural And Restored Wetlands | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAREFVVPCGPECYRKNSQDALMVGWAAARQWLDGGKIPWHAPAAEGTVPK* |
Ga0075339_10252802 | 3300014316 | Natural And Restored Wetlands | MNAEGRKEVIGAFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPVATDPVPK* |
Ga0075343_11200711 | 3300014317 | Natural And Restored Wetlands | MDSEGRTEIIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAASGTVPK* |
Ga0157380_118767871 | 3300014326 | Switchgrass Rhizosphere | MMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEALMVGWATARQWLDGGRIPWHARGG* |
Ga0180093_10570552 | 3300015258 | Soil | MNAESRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKDSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK* |
Ga0184616_100595982 | 3300018055 | Groundwater Sediment | MNAESRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKDSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0184628_100694093 | 3300018083 | Groundwater Sediment | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKDSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0190270_105942241 | 3300018469 | Soil | TEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARAG |
Ga0190274_106381451 | 3300018476 | Soil | MSSEPDATGIRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWSSARQWLEGGRIPWHARAG |
Ga0190271_100184661 | 3300018481 | Soil | MSSEPDATGIRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARAG |
Ga0190271_113176151 | 3300018481 | Soil | MNAEDRTEVIGPHSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGAVPK |
Ga0190271_130774951 | 3300018481 | Soil | MNSEGRTEVIGPFSITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAA |
Ga0190273_102841462 | 3300018920 | Soil | MSSEPDAADIRTEIIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG |
Ga0173481_102326902 | 3300019356 | Soil | MMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG |
Ga0207193_15749661 | 3300020048 | Freshwater Lake Sediment | MNPEGRTEVIGPYSIAGFVQYLSDVQVWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHVPAAEGTVPK |
Ga0210380_104486752 | 3300021082 | Groundwater Sediment | IAGLDTMTMSTEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFIVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARAG |
Ga0210341_14155861 | 3300021337 | Estuarine | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAKEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHASAAAGALRK |
Ga0210335_11099811 | 3300021346 | Estuarine | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAKEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPTAAGAIPK |
Ga0210334_107478511 | 3300021859 | Estuarine | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPVATDPVPK |
Ga0210321_10607411 | 3300022384 | Estuarine | MNSEGRTEVIGAFSITGFVQYLSDVQVWEPRIVIARIDGAAQDFVVPCGPECYRKNSQEALTAGWAAARQWLDGGKIPWHAPAATGAVPK |
Ga0210364_11665471 | 3300022396 | Estuarine | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPTAAGAIPK |
Ga0212091_103453851 | 3300022549 | Groundwater | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGA |
Ga0247778_11440501 | 3300022894 | Plant Litter | PTDANSASLETTMMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG |
Ga0207656_107281112 | 3300025321 | Corn Rhizosphere | MSSEPDAADIRTEIIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQW |
Ga0207642_105651692 | 3300025899 | Miscanthus Rhizosphere | MTMSTEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFIVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARAG |
Ga0207688_107739641 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPW |
Ga0207680_108446361 | 3300025903 | Switchgrass Rhizosphere | MSTEGEPLEGRTEVIGAFSISGGVRYLPDVQYWEPHVTVSRLDGKALPFVVPCGPECYRKSSAEAMNVGWATARMWLDGGKIPWHARSAGA |
Ga0207645_100198052 | 3300025907 | Miscanthus Rhizosphere | MSTEGEPLEGRTEVIGAFSISGGVRYLPDVQYWEPHVTVSRLDGKALPFVVPCGPECYRKSSAEAMNVGWATARMWLDGGKIPWRARSAGA |
Ga0207650_104027652 | 3300025925 | Switchgrass Rhizosphere | MSTAGESLDARTELIGNFSITGGVSYLPDVQLWEPRVTISRIDGKANPFVVPCGPECYRKSSVEALNVGWVTARLWLDGGKIPWHARTPGS |
Ga0207668_101996092 | 3300025972 | Switchgrass Rhizosphere | MSSEPDATDIRTEVIGPYAIAGSVSYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG |
Ga0207708_102884521 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | SPPPTDANSASLETTMMSSEPDAADFRTEVIGPYAIAGSVAYLADIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEAMMVGWATARQWLDGGRIPWHARGG |
Ga0256803_10373272 | 3300026375 | Sediment | LAMNPESRTEVIGPYSISGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGRIPWRASAALGPAPK |
Ga0209704_10101363 | 3300027693 | Freshwater Sediment | PAMNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0208665_101566911 | 3300027715 | Deep Subsurface | MNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAALEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0209467_12271642 | 3300027719 | Freshwater | VHPRAWNAARLYRLTAKRSAPAMNPEGRTEVIGPYSITGFVQYLSDVQVWEPRIVIARIDGAAREFVVPCGPECYRKNSQESLMAGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0209492_10806562 | 3300027721 | Freshwater Sediment | MNPEGRTEVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQESLMAGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0209492_10856192 | 3300027721 | Freshwater Sediment | MNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAAREFVVTCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0209261_100509952 | 3300027735 | Wetland Sediment | MNPEDRTEVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0209397_104142771 | 3300027871 | Wetland | PAVTRAGTVSKTSCCASSSLECSRQYRLTAKRSAPAMNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGLAPK |
Ga0209496_102211902 | 3300027890 | Wetland | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGPAPK |
Ga0209668_100606115 | 3300027899 | Freshwater Lake Sediment | VKSSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHVPAAEGTVPK |
Ga0209253_101882852 | 3300027900 | Freshwater Lake Sediment | MNPEGRTEVIGPYSITGYVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHGPAAGGAAPK |
Ga0209391_100482473 | 3300027975 | Freshwater Sediment | EVIGPYSITGFVQYLSDVQVWEPHIVIARIDGAAREFVVPCGPECYRKNSQESLMAGWAAARQWLDGGKIPWHAPAAGGAAPK |
Ga0209391_101376632 | 3300027975 | Freshwater Sediment | MNSEGRTEVIGPFTITGFVQYLSDVQLWEPRIVIARVDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0210366_102381052 | 3300028420 | Estuarine | MNSEGRTEVIGPFSITGFVQYLSDVQVWEPRIVIARNDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHASAATGAVRK |
Ga0268259_101043311 | 3300030499 | Agave | ARIANSQTTTMSSEPDATGTRTEIIGPYAIAGSVTYLADIQRWEPRMTISRIDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTS |
Ga0307405_1000054010 | 3300031731 | Rhizosphere | MSSEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTS |
Ga0307405_103593383 | 3300031731 | Rhizosphere | MTMSPDPDAPGSRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTG |
Ga0307413_100702992 | 3300031824 | Rhizosphere | MSLEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTS |
Ga0307410_100975643 | 3300031852 | Rhizosphere | MSPDPDAPGSRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTG |
Ga0307410_115141651 | 3300031852 | Rhizosphere | TRTEIIGPYAIAGSVTYLADIQRWEPRMTISRVDGSARDFIVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTG |
Ga0307407_100407251 | 3300031903 | Rhizosphere | MSPDPDAPGSRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTS |
Ga0307412_100036081 | 3300031911 | Rhizosphere | SSEPDATGIRTEIIGPYAIAGSVAYLPDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTS |
Ga0307416_1032004441 | 3300032002 | Rhizosphere | MSTARESLDARTELIGNFSITGGVSYLADVQLWEPHVTISRLDGKANPFVVPCGPECYRKNSAEALNVGWVTARLWLDGGKIPWHARSPD |
Ga0307416_1032714822 | 3300032002 | Rhizosphere | MTMSPDPDAPGSRTEIIGPYAIAGSVAYLSDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSEEALMVGWATARQWLDGGR |
Ga0307414_109336092 | 3300032004 | Rhizosphere | MTMSPDPDAPGSRTEIIGPYAIAGSVVYLSDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWLDGGRIPWHARTG |
Ga0307411_114581712 | 3300032005 | Rhizosphere | MSTARESLDARTELIGNFSITGGVSYLADVQLWEPHVTISRLDGKANPFVVPCGPECYRKNSAEALNVGWVTARLWLDGGKIPWHARSPDG |
Ga0308173_101549483 | 3300032074 | Soil | MSSAAESADSRTEVIGGCAISGGVSYLADVQLWEPRITISRIDGKAAPFVVPCGPECYRKSSVEALNVGWVTARLWLDGGRIPWHARPAEAS |
Ga0307415_1017838051 | 3300032126 | Rhizosphere | MTMSPDPDAPGSRTEIIGPYAIAGSVAYLSDIQRWEPRMTISRVDGSARDFVVPCGPECYRKNSDEALMVGWATARQWL |
Ga0316195_100081842 | 3300032263 | Sediment | MNAEGRKEVIGAFSITGFVQYLSDVQVWEPRIVIARIDGAAQEFVVPCGPECYRKNSQEALMAGWAAARQWLDGGKIPWHAPVATDPVPK |
Ga0316604_100399451 | 3300033406 | Soil | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAGGLAPK |
Ga0316605_101574742 | 3300033408 | Soil | MNSEGRTEVIGSFTITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0316603_105686962 | 3300033413 | Soil | MNSEGRKEVIGSFTITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGA |
Ga0316601_1000284572 | 3300033419 | Soil | MNSEGRKEVIGSFTITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0316613_108029402 | 3300033434 | Soil | RKSAPAMNSEGRTEVIGSFTITGFVQYLSDVQLWEPRIVIARIDGAAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0316616_1027053741 | 3300033521 | Soil | TGFVQYLSDVQLWEPRIVIARVDGAALEFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAVGAVPK |
Ga0316617_1013549521 | 3300033557 | Soil | MNAEGRTEVIGPYSITGFVQYLSDVQMWEPHIVIARVDGTAREFVVPCGPECYRKNSQEALMVGWAAARQWLDGGKIPWHAPAAADATPK |
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