Metagenome / Metatranscriptome Family F087155

Basic Information
Family ID	F087155
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	89 residues
Representative Sequence	APTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS
Number of Associated Samples	105
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.91 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Most Common Taxonomy
Group	Unclassified (99.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (30.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.727 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 41.82% Coil/Unstructured: 58.18%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
b.26.1.0: SMAD/FHA domain	d3kt9a_	3kt9	0.61
b.26.1.2: SMAD/FHA domain	d1g6ga_	1g6g	0.6
b.26.1.2: SMAD/FHA domain	d1dmza_	1dmz	0.59
f.10.1.1: Viral glycoprotein, central and dimerisation domains	d1svba2	1svb	0.58
b.26.1.2: SMAD/FHA domain	d2brfa1	2brf	0.58

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00962	A_deaminase	19.09
PF00482	T2SSF	6.36
PF00196	GerE	3.64
PF00156	Pribosyltran	2.73
PF03176	MMPL	1.82
PF12847	Methyltransf_18	0.91
PF07883	Cupin_2	0.91
PF13207	AAA_17	0.91
PF08818	DUF1801	0.91
PF00392	GntR	0.91
PF00211	Guanylate_cyc	0.91
PF00005	ABC_tran	0.91
PF03069	FmdA_AmdA	0.91
PF03734	YkuD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	19.09
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.82
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.82
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.91
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.91
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.91
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.91

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
All Organisms	root	All Organisms	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
cellular organisms	root	All Organisms → cellular organisms	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %

Scaffold	Taxonomy	Length	IMG/M Link
3300025945\|Ga0207679_10078577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.73%
Host-Associated	Host-Associated	27.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.09%
Plants	Host-Associated → Plants	27.27%
Aquatic	Environmental → Aquatic	3.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Sediment	Environmental → Aquatic → Sediment	3.64%
Geologic	Environmental → Terrestrial → Geologic	0.91%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.82%
Loam	Environmental → Terrestrial → Soil → Loam	7.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Mine	Environmental → Terrestrial → Geologic → Mine	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.64%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_04330220	2067725004	Soil	AARSENGGTAPTMRVTSPSPGAVTTAEIAVNGVAQTVPVGGVFPSSDPFFKLVILTRKGAQISIAGGSLANGSPTVTLTKAKPLTLQNTSDGTRYVLRLLSVS
INPhiseqgaiiFebDRAFT_1057293961	3300000364	Soil	LGGSGGAATRTFSPAKGPATPTAPPTSAMISVNGAPEPVQVGGTFPATDPFFKLVSLTXKGAKISIAGGSLANGAPTVTLTKNKPLTLMNTADGTRYVLRLVSVS*
Ga0062593_1034528502	3300004114	Soil	PAASGGVGPTVRVTTPAPAAVTTAEISVNGVAQTIQVGAVFPSSDPFFKLVKLTRKSAQISIAGGSLANGAPTVTLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0063455_1004115821	3300004153	Soil	VISINGSPETVAVGGQFPVANPFFTLVSLTKKGAKISIAGGSLENGAPTVTLTKSKALTLMNTADGTRYVLRLVSAS*
Ga0062595_1007076402	3300004479	Soil	GNGSTVVQVATPAPAAVTTAEISVNGVAQTVQVGGVFPSSDPFFKLVKVTRKSAKISIAGGTLANGAPTVTLTKAKPLTLQNTSDGTRYVLRLLSVS*
Ga0062592_1011643711	3300004480	Soil	PKPTTPTRVPAAAPTTATISVNGASGPESVKVGGTFPTADPFFKLVSLTRKSAKISIAGGSLENGAPTVTLTRNKALTLMNTADGTRYVLRLVSVS*
Ga0062591_1007992271	3300004643	Soil	SPAKAPSTPTAAPTAAVISVNGAPESVQVGGTFPATDPFFKLVSLTKKGAKISIAGGSLANGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0062594_1024601431	3300005093	Soil	VTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVVLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0066671_109604331	3300005184	Soil	PPARLTSASISVNGVSEAVQVGGQFPASNPTFVLVSVTHTNAKVGIAGGSIQGSRQTVTLKKNTPVTLMNTADGTRYVLRLLAVS*
Ga0065705_100528303	3300005294	Switchgrass Rhizosphere	SVNGAPESVQVGGTFPATDPFFKLVSLTKKGAKISIAGGSLANGAPTVTLTKNKPLTLMNTADGTRYVLRLVSVS*
Ga0070689_1016660181	3300005340	Switchgrass Rhizosphere	PVPKSQAAAVHSQPTAAATSAVISVNGAPETVKAGGTFPTSNPYFKLVSVTKQGAKISIAGGSLENGAPTITLTKNKPLTLMNTADGTRYVLRLVSLS*
Ga0070668_1013137251	3300005347	Switchgrass Rhizosphere	NGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0070671_1005430771	3300005355	Switchgrass Rhizosphere	VGGSGGSGGSQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0070667_1013473321	3300005367	Switchgrass Rhizosphere	QHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0070709_106274011	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GAAMTGSGGPVPKSQAAAVHSQPTAAATSAVISVNGAPETVKAGGTFPTSNPYFKLVSVTKQGAKISIAGGSLENGAPTITLTKNKPLTLMNTADGTRYVLRLVSLS*
Ga0070705_1003900802	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KPAPTPTAAPTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0070696_1009672152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PTAAPTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0070664_1005935981	3300005564	Corn Rhizosphere	GSVTAASKFASKPAPTSTAAPTTATISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0066705_102316411	3300005569	Soil	NGVSEAVQVGGQFPASNPTFVLVSVTHTNAKVGIAGGSIQGSRQTVTLKKNTPVTLMNTADGTRYVLRLLAVS*
Ga0066694_100611911	3300005574	Soil	TGTGTGTQPPVKATVAVISVNGSSETVQVGARFPLSNPTFVLVSLTAKTATVGIANGSLAGSKQTVMLKKNVPLTLMNTADGTRYVLRLVAVS*
Ga0068857_1023275502	3300005577	Corn Rhizosphere	PVESGSSGEGGSVTAASKFASKPAPTSTAAPTTATISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNRALTLMNTADGTRYVLRLVSVS*
Ga0068854_1016170721	3300005578	Corn Rhizosphere	APTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0066905_1016070422	3300005713	Tropical Forest Soil	VASSSSGGNAKGGTAPTMRVTSPAPGAVTTAEIAVNGVAQSVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPMVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0066652_1015521352	3300006046	Soil	PVPAAVPTTARISVNGAPESVRAGATFPTADPFFKLVSLTKKSAKISIAGGSLETGAPTVTLTKSKALTLMNTADGTRYVLRLVSVS*
Ga0074049_130719371	3300006580	Soil	TTPAPAPARPTTAVISVNGDSEEVKVGGTFPASNPTFTLSSLTKTTAQVGIAGGSLEGKKQTVTLKKGVPLTLMNTADGTRYVLRLVSVS*
Ga0074063_142872462	3300006953	Soil	PESVQTGGTFPASNPYFKLVSLSKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0079219_118404372	3300006954	Agricultural Soil	SPKQTPTSGGGAAVASTGAGATVKVTTPAPAAVTTAEISVNGVAQTVQVGGVFPASDPFFKLVKLTRKSAKISIAGGSLANGAPSVTLTKGKPLTLQNTSDGTRYVLRLLSVS*
Ga0105240_109574431	3300009093	Corn Rhizosphere	GGSGGSGGSQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0105245_106291042	3300009098	Miscanthus Rhizosphere	PPPSSGAVRPSTAKISVNGATETVSVNADFPADDPVFRLVSLTKSSAKVSIAGGSLSTGAPTVTLVKGKKVTLMNTADGTRYELVLVSVG*
Ga0105237_109108013	3300009545	Corn Rhizosphere	VISVNGSPESVQVGGTFTSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0126313_114351401	3300009840	Serpentine Soil	AAAPLFRLVKLAAKSAKISIAGGTLATGAPTVTLELGKSLTLMNTADGTRYVLILVSTAATPAAGASTPTP*
Ga0126304_101586753	3300010037	Serpentine Soil	GAATISVNGVQETVSVASDFPAAAPLFRLVTLAAKSAKISIAGGTLATGAPTVTLELGKSLTLMNTADGTRYVLILVSTAATPAAGASTPTP*
Ga0126309_101116141	3300010039	Serpentine Soil	RSTPAASPVAAKSTAAMILVNGSSETVQTGANFPAGAPIFKLVSLTKQTAKIAIAGGSLDSGSSTVTLKKNTPVTLLNTADGTRYVLRLVSIS*
Ga0126384_107268572	3300010046	Tropical Forest Soil	IAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKAKPLTLQNTSDGTRYVLRLLSVS*
Ga0126377_122739321	3300010362	Tropical Forest Soil	VTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGSPTVTLTKAKPLTLQNTSDGTRYVLRLLSVS*
Ga0134124_107338913	3300010397	Terrestrial Soil	GSGGSQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0134122_120433811	3300010400	Terrestrial Soil	ASKPAPAPTAAPTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0105246_112933712	3300011119	Miscanthus Rhizosphere	AAAPTSAVISVNGAPETVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0137381_100625115	3300012207	Vadose Zone Soil	VKLSSAEISVNGIPESVAVGATFPASNPTFVLVSLTKKSAKIGISGGSLEGSKQTVTLKKGVALTLMNTADGTRYVLRLVSVG*
Ga0150985_1032477261	3300012212	Avena Fatua Rhizosphere	SGGTVPPAHPASTPTAPTAQLTSAVISINGAPETVQVGDTFPAADPYFSLVSLTKKGAKVSIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0150985_1147928322	3300012212	Avena Fatua Rhizosphere	TSAQISVNGARESVSVGAQFPASSPGFGLVSLKRSSAKIAIAGGTLQGGGTVTLKKGRPLTLMNTADGTRYVLRLVSVS*
Ga0157342_10178712	3300012507	Arabidopsis Rhizosphere	GVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0157309_100248341	3300012895	Soil	TAPTMRVTSPPPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0157293_102907231	3300012898	Soil	ASSSGGGKGSGGTAPTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0157291_100059303	3300012902	Soil	MRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0157291_101571042	3300012902	Soil	SAARISVNGAPEWVDLSKTFPKSDPVFRLVALTRTTAKIGVAGGSLSTGDGTTTLTKGKKVTLMNTADGARYELVLLALS*
Ga0157283_100122753	3300012907	Soil	PSAARISVNGAPEWVDLSKTFPKSDPVFRLVALTRTTAKIGVAGGSLSTGDGTTTLTKGKKVTLMNTADGARYELVLLALS*
Ga0157301_100592863	3300012911	Soil	GAPEWVDLSKTFPKSDPVFRLVALTRTTAKIGVAGGSLSTGDGTTTLTKGKKVTLMNTADGARYELVLLALS*
Ga0157297_100821931	3300012914	Soil	PAAVTSAEISVNGASQTVQVGGVFPSSDPFFKLVKLTRKSAQISIAGGSLANGAPTVTLAKGKALTLQNTSDGTRYVLRLFAVS*
Ga0157302_103342521	3300012915	Soil	APTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS*
Ga0162652_1000034921	3300012941	Soil	TVVQVATPAAAAVTTAEISVNGVAQTVQVGGVFPSSDPFFKLVKVTRKSAKISIAGGTLANGAPTVTLTKAKPLTLQNTSDGTRYVLRLLSVS*
Ga0164300_104027911	3300012951	Soil	AVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0164298_117014221	3300012955	Soil	TTAVISVNGSPESVQVGGPFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0164299_111720621	3300012958	Soil	TRYRAALTTAVIFVNGKSETVQVGSQFPASDPAFRLVSLTATAAKVGIAGGSFENGSQTVKLKKNKPLTLMNTADGTRYVLRFLSAK*
Ga0134076_105733052	3300012976	Grasslands Soil	NGISESVAVGAKFPASNPTFVLVSLTRKSAKIGISGGSLEGSKQTVTLKKGVALTLMNTADGTRYVLRLVSVS*
Ga0168317_10352223	3300012982	Weathered Mine Tailings	SEDVLIGKTFPASAAQPYFQLVSLSATSARISIAGGSLATGAPTVTLVKGKKLTLMNTADGTRYVLVLLALA*
Ga0157370_103784131	3300013104	Corn Rhizosphere	PPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0157378_103522533	3300013297	Miscanthus Rhizosphere	PTAAPTAAVISVNGAPESVQLGGTFPATDPFFKLVSLTKKGAKISIAGGSLANGAPTVTLTKNKPLTLMNTADGTRYVLRFLSAK*
Ga0157372_102534964	3300013307	Corn Rhizosphere	VVSGSGGSGGAQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS*
Ga0157372_121291802	3300013307	Corn Rhizosphere	AVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS*
Ga0182008_108951401	3300014497	Rhizosphere	PKPAAKPAPAPTAAPTAAVISINGAPETVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKTKALTLMNTADGTRYVLRLVSVS*
Ga0132257_1032660191	3300015373	Arabidopsis Rhizosphere	KPAAKPAPAPTAPAAAPTTAVISINGAPESVDVGGTFPSSDPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKPLTLMNTADGTRYVLRLVSVS*
Ga0187775_102286841	3300017939	Tropical Peatland	TLAPAPAPTKPTTAAISVNGNSEQVKVGGKFPASDPTFVLVSLTKTTAQVGIAGGSLEGNKQTVTLKKGVPLTLMNTADGTRYVLRLVSVS
Ga0184610_12762531	3300017997	Groundwater Sediment	PTAKPTSAKISVNGANEQVNVGATFPAADPVFQLVSLTKTTAKVGIAGGSLSTGSPTVTLRKGKKVTLMNTADGTRYELLLVSLF
Ga0184605_101335611	3300018027	Groundwater Sediment	AAKRTSAQISVNGAKEQVSVGGTFPAADPVFQLVSLTKTTAKVGIAGGSLSTGTGTVTLTKGKKVTLMNTADGTRYELVLVSTR
Ga0184605_102942511	3300018027	Groundwater Sediment	PPPAATSKQAAVAPTAARFSVNGATELVGVSKTFPAADPVFHLVSLTKTTAKIGVAGGSLSTGSATVTLKKGKKVTLMNTADGTRYELILVSVS
Ga0184605_104642861	3300018027	Groundwater Sediment	MVGGSTSPTPPPVRVVPTTAVILVNGSPETVQVGGNFPSSDPVFTLVSLTAKTAKVSIAGGSLENGAAAVTLQKKKPVTLLNTADGTRYVLRLLSIS
Ga0173482_102453751	3300019361	Soil	SSGGGKGSGGTAPTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0193715_11086161	3300019878	Soil	AALTTAVILVNGKSESVQVGSQFPASDPAFRLVSLTATGAKVGIAGGSFENGTPTVTLKKNKSLTLMNTADGTRYVLRLLSVA
Ga0193747_11526401	3300019885	Soil	SAGGGATGKTGTGKTGTIPSSQPPAKPSTALISVNGTSETVQVGAQFPASNPTFVLVSLTAAQAKVGIAGGSIEGGEQAVTLKKGVPLTLMNTADGVRYVLRLISVS
Ga0193719_101527042	3300021344	Soil	VNGKSETVQVGSQFPASDPAFRLVSLTATAAKVGIAGGSFENGTPTVTLKKNKPLTLMNTADGTRYLLRLVSVS
Ga0247786_10407513	3300022883	Soil	SVNGTSELVELGKTFPSSDPVFRLVALTRTTAKVGIAGGSLSTGEGTTTLTKGKKVTLMNTADGTRYQLILLSLS
Ga0247753_10109401	3300022892	Soil	NGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0247745_10015241	3300022898	Soil	GSGGTAPTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0247788_10525312	3300022901	Soil	VTSSGGGKGSGGTAPTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0247801_10400861	3300023064	Soil	AAPTSGGAVVTSSGGGKGSGGTAPTMRVTSPAPGAVTTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0247743_10460001	3300023067	Soil	TTAEIAVNGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKTKPLTLQNTSDGTRYVLRLLSVS
Ga0247752_10448262	3300023071	Soil	ELVELGKTFPSSDPVFRLVTLTRTTAKVGIAGGSLSTGEGTTTLTKGKKVTLMNTADGTRYQLILLSLS
Ga0247664_10179813	3300024232	Soil	SAPAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0247677_10142092	3300024245	Soil	STAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0247680_10546301	3300024246	Soil	PINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0247687_10075901	3300024286	Soil	SSAPAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0247678_10260721	3300024325	Soil	NDGSSAPAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0207688_104664231	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	SPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0207699_102057032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DGSSAPAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0207671_108509733	3300025914	Corn Rhizosphere	GSGGSQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0207687_108416333	3300025927	Miscanthus Rhizosphere	SGGSAGSQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0207706_103000664	3300025933	Corn Rhizosphere	STTAVISVNGSPESVQVGGTLPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0207670_117487191	3300025936	Switchgrass Rhizosphere	RELLRQCAELEQGVKAGGTFPTSNPYFKLVSVTKQGAKISIAGGSLENGAPTITLTKNKPLTLMNTADGTRYVLRLVSLS
Ga0207679_100785771	3300025945	Corn Rhizosphere	APTPTAAPTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS
Ga0207712_107656932	3300025961	Switchgrass Rhizosphere	VISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0207677_108324502	3300026023	Miscanthus Rhizosphere	PTTAVISINGAPESVQVGGTFPAADPYFKLVSLTKKGAKISIAGGSLENGAPTVTLTKNKALTLMNTADGTRYVLRLVSVS
Ga0207639_101343171	3300026041	Corn Rhizosphere	AQHPSPPAAAPAGPTTPSTTAVISVNGSPESVQVGGTFPSSNPYFKLISLTKKGAKISIAGGSLENGAPTVTLTKNKAVTLMNTADGTRYVLRLISTS
Ga0209801_13617631	3300026326	Soil	EQVGIGQTFPQADPLFRLVSLTNKTAKIGIAAGSLATGSATVTLTKGKKVTLMNTADGTRYELVLVSVGTSFAPSAP
Ga0209473_10031761	3300026330	Soil	SGGSGGGGTQNQPPARLTSASISVNGVSEAVQVGGQFPASNPTFVLVSVTHTNAKVGIAGGSIQGSRQTVTLKKNTPVTLMNTADGTRYVLRLLAVS
Ga0209474_105187472	3300026550	Soil	TGTQPPVKATVAVISVNGSSETVQVGARFPLSNPTFVLVSLTAKTAKVGIANGSLAGSKQTVMLKKNVPLTLMNTADGTRYVLRLVAVS
Ga0209177_103304641	3300027775	Agricultural Soil	SPKQTPTSGGGAAVASTGAGATVKVTTPAPAAVTTAEISVNGVAQTVQVGGVFPASDPFFKLVKLTRKSAKISIAGGSLANGAPSVTLTKGKPLTLQNTSDGTRYVLRLLSVS
Ga0268266_119572521	3300028379	Switchgrass Rhizosphere	SGGPVPKSQAAAVHSQPTAAATSAVISVNGAPETVKAGGTFPTSNPYFKLVSVTKQGAKISIAGGSLENGAPTITLTKNKPLTLMNTADGTRYVLRLVSLS
Ga0268265_108242012	3300028380	Switchgrass Rhizosphere	NGVAQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKAKPLTLQNTSDGTRYVLRLLSVS
Ga0307303_100391442	3300028713	Soil	RTAAMISVNGSPESVKVGGTFPTANPYFRLVSLTKHGAKISIAGGSLETGLPTVTLTKNRALTLMNTADGTRFVLRLVSAS
Ga0307319_1000148811	3300028722	Soil	EPLPPKGPTGATAPTTGGGSTSAAPPPVRVVPTSAVISVNGSPQTVQVGGTFPSDDPVFTLVSLTAKTAKVGIAGGSLENGAAAVTLQKKKPVTLLNTADGTRYVLRLLSIS
Ga0307314_100070713	3300028872	Soil	GTASPTRYRAALTTAVILVNGKSESVQVGSQFPASDPAFRLVSLTATGAKVGIAGGSFENGTPTVTLKKNKSLTLMNTADGTRYVLRLVSVSSS
Ga0307289_104844671	3300028875	Soil	TSAVISVNGAPQTVQVGGSFPASDPAFALVSVTAKAARVGIAGGALENGKATVTLTKNKPLTLMNTADGTRYVLRFLSAK
Ga0307501_100703731	3300031152	Soil	GAPESVQVGGTFPTADPYFKLVSLTKKGAKISIAGGTLDNGAPTVTLTKNKALTLMNTADGTRYVLRLVSVA
Ga0310887_101273781	3300031547	Soil	PAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLTKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS
Ga0307412_109973911	3300031911	Rhizosphere	PAGAPLFRLVKLTTKSAGISIAGGTLASGAPTVKLQLGKPLTLMNTADGTRYVLILVSTRAAPPAGASTPNP
Ga0308175_1024272011	3300031938	Soil	GGAGPTVRVTSPAPAAVTTAEISVNGVSQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVTLAKGKALTLQNTSDGTRYVLRLLSVS
Ga0310906_103246531	3300032013	Soil	AQTVQVGGVFPSSDPFFKLVKLTRKGAQISIAGGSLANGAPTVMLTKAKPLTLQNTSDGTRYVLRLLSVS
Ga0307471_1011898062	3300032180	Hardwood Forest Soil	VNGSSQSVQVGAQFPSSDPTFTQVSVTTKTAKVGIAGGALESGGATVTLKKNKPLTLMNTADGTRYVLRLVSVG
Ga0307472_1015499581	3300032205	Hardwood Forest Soil	SAPAASRAAVSTAVISINGAPESVRVGGQFPAASPVFKLVSLSKTGAKVGIAGGTLQTGDATVALKKNTPVTLLNTSDGTRYVLRLVSVS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087155

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign