Metagenome Family F087295

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087295
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	50 residues
Representative Sequence	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYIN
Number of Associated Samples	77
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.00 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	96.36 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (73.636 % of family members)
Environment Ontology (ENVO)	Unclassified (98.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.46% β-sheet: 0.00% Coil/Unstructured: 36.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02229	PC4	1.82
PF07883	Cupin_2	1.82
PF02401	LYTB	0.91
PF01467	CTP_transf_like	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
All Organisms	root	All Organisms	21.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
cellular organisms	root	All Organisms → cellular organisms	13.64 %
Viruses	superkingdom	All Organisms → Viruses	8.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	12.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	12.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	12.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.18 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	12.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002514\|JGI25133J35611_10104641	Not Available	829	Open in IMG/M
3300002514\|JGI25133J35611_10166621	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	595	Open in IMG/M
3300002518\|JGI25134J35505_10083987	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	720	Open in IMG/M
3300002519\|JGI25130J35507_1092380	Not Available	554	Open in IMG/M
3300002760\|JGI25136J39404_1046285	Not Available	806	Open in IMG/M
3300005398\|Ga0066858_10143867	Not Available	690	Open in IMG/M
3300005398\|Ga0066858_10160970	Not Available	649	Open in IMG/M
3300005398\|Ga0066858_10166538	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	636	Open in IMG/M
3300005424\|Ga0066826_10128205	Not Available	908	Open in IMG/M
3300005425\|Ga0066859_10018034	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300005425\|Ga0066859_10176896	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	631	Open in IMG/M
3300005605\|Ga0066850_10030071	Not Available	2239	Open in IMG/M
3300005605\|Ga0066850_10247189	Not Available	636	Open in IMG/M
3300006019\|Ga0066375_10108919	Not Available	885	Open in IMG/M
3300006091\|Ga0082018_1059067	Not Available	691	Open in IMG/M
3300006340\|Ga0068503_10133740	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1172	Open in IMG/M
3300006736\|Ga0098033_1055198	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1162	Open in IMG/M
3300006736\|Ga0098033_1125105	Not Available	726	Open in IMG/M
3300006738\|Ga0098035_1192732	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	682	Open in IMG/M
3300006750\|Ga0098058_1089107	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	840	Open in IMG/M
3300006750\|Ga0098058_1165173	Not Available	582	Open in IMG/M
3300006751\|Ga0098040_1106075	Not Available	844	Open in IMG/M
3300006753\|Ga0098039_1044062	Not Available	1570	Open in IMG/M
3300006753\|Ga0098039_1122719	Not Available	891	Open in IMG/M
3300006753\|Ga0098039_1268376	Not Available	572	Open in IMG/M
3300006754\|Ga0098044_1224519	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	733	Open in IMG/M
3300006789\|Ga0098054_1237017	Not Available	660	Open in IMG/M
3300006793\|Ga0098055_1229653	Not Available	701	Open in IMG/M
3300006900\|Ga0066376_10372383	Not Available	821	Open in IMG/M
3300006923\|Ga0098053_1017808	All Organisms → Viruses → Predicted Viral	1557	Open in IMG/M
3300006923\|Ga0098053_1058938	Not Available	788	Open in IMG/M
3300006926\|Ga0098057_1063595	Not Available	901	Open in IMG/M
3300006927\|Ga0098034_1035527	Not Available	1495	Open in IMG/M
3300006927\|Ga0098034_1067082	Not Available	1043	Open in IMG/M
3300006927\|Ga0098034_1121603	Not Available	743	Open in IMG/M
3300006927\|Ga0098034_1138639	Not Available	688	Open in IMG/M
3300006927\|Ga0098034_1155891	Not Available	643	Open in IMG/M
3300008216\|Ga0114898_1035098	All Organisms → Viruses → Predicted Viral	1658	Open in IMG/M
3300008219\|Ga0114905_1191166	Not Available	664	Open in IMG/M
3300009418\|Ga0114908_1193634	Not Available	634	Open in IMG/M
3300009622\|Ga0105173_1051789	Not Available	693	Open in IMG/M
3300010155\|Ga0098047_10347745	Not Available	557	Open in IMG/M
3300012950\|Ga0163108_10447085	Not Available	834	Open in IMG/M
3300012950\|Ga0163108_10709252	Not Available	650	Open in IMG/M
3300017703\|Ga0181367_1024962	All Organisms → Viruses → Predicted Viral	1080	Open in IMG/M
3300017704\|Ga0181371_1068950	Not Available	573	Open in IMG/M
3300017775\|Ga0181432_1006361	All Organisms → Viruses → Predicted Viral	2759	Open in IMG/M
3300017775\|Ga0181432_1172464	Not Available	671	Open in IMG/M
3300017775\|Ga0181432_1254414	Not Available	554	Open in IMG/M
3300020277\|Ga0211568_1126470	Not Available	527	Open in IMG/M
3300020338\|Ga0211571_1031269	Not Available	1457	Open in IMG/M
3300020361\|Ga0211531_1133241	Not Available	661	Open in IMG/M
3300020364\|Ga0211538_1152644	Not Available	667	Open in IMG/M
3300020364\|Ga0211538_1237430	Not Available	509	Open in IMG/M
3300020367\|Ga0211703_10079600	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	810	Open in IMG/M
3300021978\|Ga0232646_1086336	Not Available	1062	Open in IMG/M
3300022225\|Ga0187833_10649323	Not Available	517	Open in IMG/M
3300022227\|Ga0187827_10350052	Not Available	933	Open in IMG/M
3300025066\|Ga0208012_1001096	Not Available	7809	Open in IMG/M
3300025066\|Ga0208012_1007898	All Organisms → Viruses → Predicted Viral	1988	Open in IMG/M
3300025066\|Ga0208012_1039381	Not Available	711	Open in IMG/M
3300025072\|Ga0208920_1039306	Not Available	968	Open in IMG/M
3300025078\|Ga0208668_1079288	Not Available	584	Open in IMG/M
3300025082\|Ga0208156_1029519	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	1185	Open in IMG/M
3300025096\|Ga0208011_1058629	Not Available	876	Open in IMG/M
3300025097\|Ga0208010_1020680	Not Available	1606	Open in IMG/M
3300025103\|Ga0208013_1040309	Not Available	1300	Open in IMG/M
3300025112\|Ga0209349_1074103	Not Available	1013	Open in IMG/M
3300025112\|Ga0209349_1157654	Not Available	606	Open in IMG/M
3300025118\|Ga0208790_1064324	All Organisms → Viruses → Predicted Viral	1125	Open in IMG/M
3300025122\|Ga0209434_1062922	Not Available	1119	Open in IMG/M
3300025131\|Ga0209128_1045205	Not Available	1654	Open in IMG/M
3300025131\|Ga0209128_1100017	Not Available	937	Open in IMG/M
3300025131\|Ga0209128_1138200	Not Available	742	Open in IMG/M
3300025131\|Ga0209128_1156988	Not Available	676	Open in IMG/M
3300025305\|Ga0208684_1131172	Not Available	601	Open in IMG/M
3300025873\|Ga0209757_10025824	All Organisms → Viruses → Predicted Viral	1652	Open in IMG/M
3300026084\|Ga0208881_1060004	Not Available	733	Open in IMG/M
3300026186\|Ga0208128_1061294	Not Available	883	Open in IMG/M
3300026192\|Ga0207986_1097851	Not Available	637	Open in IMG/M
3300026199\|Ga0208638_1083163	Not Available	943	Open in IMG/M
3300026200\|Ga0208894_1042783	Not Available	1468	Open in IMG/M
3300026200\|Ga0208894_1172111	Not Available	552	Open in IMG/M
3300026202\|Ga0207984_1051656	All Organisms → Viruses → Predicted Viral	1072	Open in IMG/M
3300026204\|Ga0208521_1080111	Not Available	902	Open in IMG/M
3300026209\|Ga0207989_1111536	Not Available	670	Open in IMG/M
3300026209\|Ga0207989_1123653	Not Available	625	Open in IMG/M
3300026210\|Ga0208642_1049689	Not Available	995	Open in IMG/M
3300026211\|Ga0208132_1068139	Not Available	842	Open in IMG/M
3300026211\|Ga0208132_1113711	Not Available	606	Open in IMG/M
3300026212\|Ga0208409_1038559	Not Available	1242	Open in IMG/M
3300026256\|Ga0208639_1064313	Not Available	973	Open in IMG/M
3300026256\|Ga0208639_1077272	Not Available	857	Open in IMG/M
3300026256\|Ga0208639_1152087	Not Available	534	Open in IMG/M
3300026256\|Ga0208639_1166303	Not Available	501	Open in IMG/M
3300026259\|Ga0208896_1136494	Not Available	662	Open in IMG/M
3300026261\|Ga0208524_1060957	Not Available	1067	Open in IMG/M
3300026261\|Ga0208524_1069366	Not Available	984	Open in IMG/M
3300026262\|Ga0207990_1106358	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	702	Open in IMG/M
3300026263\|Ga0207992_1073204	Not Available	939	Open in IMG/M
3300026268\|Ga0208641_1073702	Not Available	1005	Open in IMG/M
3300028022\|Ga0256382_1177242	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	509	Open in IMG/M
3300028190\|Ga0257108_1066673	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300028190\|Ga0257108_1077708	Not Available	989	Open in IMG/M
3300032048\|Ga0315329_10372804	Not Available	760	Open in IMG/M
3300032278\|Ga0310345_11222130	Not Available	735	Open in IMG/M
3300032278\|Ga0310345_11773588	Not Available	602	Open in IMG/M
3300032360\|Ga0315334_11609293	Not Available	555	Open in IMG/M
3300032820\|Ga0310342_102289557	Not Available	646	Open in IMG/M
3300034695\|Ga0372840_122159	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	778	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	88.18%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.45%
Strait	Environmental → Aquatic → Marine → Strait	2.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.82%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.91%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	85.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.73%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.82%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.82%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.91%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	73.64%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	5.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.45%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.64%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.82%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.82%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.82%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.91%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020277	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556102-ERR599152)	Environmental	Open in IMG/M
3300020338	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX555920-ERR599099)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020367	Marine microbial communities from Tara Oceans - TARA_B100000508 (ERX556112-ERR599005)	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026084	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026186	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026199	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)	Environmental	Open in IMG/M
3300026200	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49 (SPAdes)	Environmental	Open in IMG/M
3300026202	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300026263	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25133J35611_101046411	3300002514	Marine	MNKDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTIL*
JGI25133J35611_101666211	3300002514	Marine	MNKDKKLKKITKKYKAGELEPREDLPEDLKVAIKTFMEQAVIMEEYDTDFINGEYMAN
JGI25134J35505_100839873	3300002518	Marine	MNKDKEIKRITKKYKDGELEPRKDLPEDLKIAIRTFMEQVVIMEEYDTD
JGI25130J35507_10923802	3300002519	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYI
JGI25136J39404_10462851	3300002760	Marine	MNKDKEIKRITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIM
Ga0066858_101438671	3300005398	Marine	MSKDKDMKVITKKYRAGKLEPREDLPEDLKIAIRTFMEQAVIM
Ga0066858_101609701	3300005398	Marine	MNKDKEIKRITKKYRAGKLEPREELPEDLKIAIKTFMEQVVIMEEYNTDFINGEYMANLIKAFSKYP
Ga0066858_101665381	3300005398	Marine	MNKDKEIKRITKKYKDGKLEPREDLPEDLKIAIRTFMEQAVIMEEY
Ga0066826_101282053	3300005424	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAV
Ga0066859_100180345	3300005425	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYD
Ga0066859_101768961	3300005425	Marine	MNRDKEIKKITKKYKAGKLEPRKDLPEDLKIAIRTFMEQVVIMEEYDTDYIN
Ga0066850_100300715	3300005605	Marine	MNKERAVKKITKKYKDGKLEPREDLPEDLKIAIKTFMEQAVIME
Ga0066850_102471891	3300005605	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEY
Ga0066375_101089191	3300006019	Marine	MNKDKEVKRITKKYKAGKLEPREELPEDLKIAIKTFM
Ga0082018_10590672	3300006091	Marine	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDFI
Ga0068503_101337401	3300006340	Marine	VNKDKQLKKITKKYRAGKLEPREDLPEDLKIAIKTFMEQAVIME
Ga0098033_10551985	3300006736	Marine	MNKDKEIKRITKKYKDGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDYINGEY
Ga0098033_11251051	3300006736	Marine	MNKDKEIKRITKKYKAGELEPREELPEDLKIAIRTFMEQVVIVEEYDTDYINGEYMANLIKAFSKYPE
Ga0098035_11927321	3300006738	Marine	MNKDKEIKRITKKYKDGELEPRKDLPEDLKIAIRTFMEQVVIMEEYDTDYI
Ga0098058_10891071	3300006750	Marine	MNKDKEIKKITKKYKDGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYI
Ga0098058_11651731	3300006750	Marine	MNRDKEIKRITKKYKSGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFING
Ga0098040_11060753	3300006751	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIME
Ga0098039_10440625	3300006753	Marine	MNKDKEIKKITKKYKDGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDYINGEYMANLIKAFSKYP
Ga0098039_11227193	3300006753	Marine	MNKDKEIKRITKKYKAGELEPREELPEDLKIAIRTFMEQVVIMEEYDTDYINGEYMA
Ga0098039_12683762	3300006753	Marine	MSKDKDMKVITKKYKAGKLEPREDLPEDLKVAIKIFMEQAVIMEEYNTDFINGEYMAN
Ga0098044_12245193	3300006754	Marine	MNKDKEIKRITKKYKDGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGE
Ga0098054_12370171	3300006789	Marine	MNRDKEIKRITKKYKSGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGEYM
Ga0098055_12296531	3300006793	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGEY
Ga0066376_103723833	3300006900	Marine	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIRTFM
Ga0098053_10178081	3300006923	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQ
Ga0098053_10589383	3300006923	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQ
Ga0098057_10635951	3300006926	Marine	MNKDKEIKRITKKYKAGELEPREELPEDLKIAIRTFMEQVVIMEEYDTDYINGEYMANLIKAF
Ga0098034_10355271	3300006927	Marine	MNKDKEIKRITKKYKDGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYM
Ga0098034_10670823	3300006927	Marine	MNRDKEIKKITNKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMAN
Ga0098034_11216031	3300006927	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYM
Ga0098034_11386391	3300006927	Marine	MNKDKEVKRITKKYKAGKLEPRKDLPEDLKIAIRTFMEQVVIMEEYDTDYINGEYM
Ga0098034_11558913	3300006927	Marine	MNRDKEIKRITKKYKAGKLEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDYI
Ga0114898_10350987	3300008216	Deep Ocean	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDYI
Ga0114905_11911661	3300008219	Deep Ocean	MNKDKQLKKITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIMEEYN
Ga0114908_11936343	3300009418	Deep Ocean	MNKDKQLKKITKKYKAGKLEPRDDLPEDLKIAIRTFMEQAVIMEEYN
Ga0105173_10517893	3300009622	Marine Oceanic	MSKDRDMKVITKKYMEGKLEPRKDLPEDLKIAIRTFMEQAVIMEEY
Ga0098047_103477451	3300010155	Marine	MSKDKDMKVITKKYKAGKLEPREDLPEDLKVAIKTF
Ga0163108_104470853	3300012950	Seawater	MNKDRQLKKITNKYKDGELEPRDDLPEDLKIAISTFMEQ
Ga0163108_107092523	3300012950	Seawater	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMANLI
Ga0181367_10249621	3300017703	Marine	MNRDKEIKRITKKYKSGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTD
Ga0181371_10689502	3300017704	Marine	MNRDKQLKKITKKYKDGELEPRDDLPEDLKIAISTFMEQVVIMEEYDTDFINGEYMANLI
Ga0181432_100636110	3300017775	Seawater	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYING
Ga0181432_11724641	3300017775	Seawater	MNRDKEIKKITKKYKAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDY
Ga0181432_12544143	3300017775	Seawater	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIKTFMEQ
Ga0211568_11264702	3300020277	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDFINGEYMANLIKAFSK
Ga0211571_10312694	3300020338	Marine	MSKDKDMKVITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIMEEYNTDFINGEYMANLIKAFSKYPEHS
Ga0211531_11332411	3300020361	Marine	MSKDKDMKVITKKYRAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYNTDYINGEYMANLIEAFSKYPE
Ga0211538_11526443	3300020364	Marine	MNKDKEIKRITKKYKDGELEPREDLPEDLKIAIRTFM
Ga0211538_12374301	3300020364	Marine	MNKDKEVKRITKKYKAGKLEPRKDLPEDLKIAIRTFM
Ga0211703_100796001	3300020367	Marine	VNKDKQLKKITKKYRAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDFINGEYMANL
Ga0232646_10863361	3300021978	Hydrothermal Vent Fluids	MSKDKDMKVITNKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYNTDYINGEYMANLINAFSKYPE
Ga0187833_106493233	3300022225	Seawater	MCEFEKMNKDKRLKKITKKYKDGELEPRDDLPEDLKIAISTFME
Ga0187827_103500523	3300022227	Seawater	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMAN
Ga0208012_10010961	3300025066	Marine	MNRDKEIKRITKKYKSGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGEYMA
Ga0208012_10078987	3300025066	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQA
Ga0208012_10393813	3300025066	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGEYMA
Ga0208920_10393061	3300025072	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFM
Ga0208668_10792881	3300025078	Marine	MNKDKEVKRITKKYKAGKLEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDYINGEYMANL
Ga0208156_10295195	3300025082	Marine	MNKDKEIKKITKKYKDGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDYINGEYMANLIKAF
Ga0208011_10586293	3300025096	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEY
Ga0208010_10206805	3300025097	Marine	MNKDKEIKRITKKYKDGELEPRKDLPEDLKIAIRTFMEQVVIMEEYDTDY
Ga0208013_10403091	3300025103	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEY
Ga0209349_10741033	3300025112	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYIN
Ga0209349_11576541	3300025112	Marine	MNKDKEVKRITKKYKAGKLEPRKDLPEDLKIAIRTFMEQVVIMEEYDTDYINGEYMANL
Ga0208790_10643241	3300025118	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQV
Ga0209434_10629223	3300025122	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDYINGEYM
Ga0209128_10452056	3300025131	Marine	MNKDKEIKRITKKYKDGELEPRKDLPEDLKIAIRTFMEQVVIMEEYDT
Ga0209128_11000171	3300025131	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMANL
Ga0209128_11382001	3300025131	Marine	MCEFEKMNKDKEIKKITKKYKDGELEPREDLPEDLKI
Ga0209128_11569881	3300025131	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMANL
Ga0208684_11311721	3300025305	Deep Ocean	MNKDKQLKKITKKYKAGKLEPRDDLPEDLKIAIRTFMEQAVIM
Ga0209757_100258241	3300025873	Marine	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVI
Ga0208881_10600044	3300026084	Marine	MNKDKEIKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDY
Ga0208128_10612943	3300026186	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTD
Ga0207986_10978513	3300026192	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEYMAN
Ga0208638_10831631	3300026199	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYING
Ga0208894_10427831	3300026200	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTF
Ga0208894_11721112	3300026200	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDYINGEYMANL
Ga0207984_10516561	3300026202	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQA
Ga0208521_10801111	3300026204	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGE
Ga0207989_11115361	3300026209	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGEY
Ga0207989_11236531	3300026209	Marine	MNRDKEIKRITKKYKSGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGE
Ga0208642_10496893	3300026210	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEE
Ga0208132_10681391	3300026211	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYNTDYINGEYMA
Ga0208132_11137111	3300026211	Marine	MNRDKEIKKITKKYKAGKLEPRKDLPEDLKIAIRTFMEQVVIM
Ga0208409_10385593	3300026212	Marine	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYINGE
Ga0208639_10643131	3300026256	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDY
Ga0208639_10772721	3300026256	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVI
Ga0208639_11520871	3300026256	Marine	MNRDKQLKKITKKYKDGELEPRDDLPEDLKIAISTFMEQAVIMEEYDTDFINGEYMANLIKAFSKYP
Ga0208639_11663032	3300026256	Marine	MSKDKDMKVITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIMEEYNTDFINGEYMANLIKA
Ga0208896_11364941	3300026259	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYIN
Ga0208524_10609573	3300026261	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIMEEYDTDYING
Ga0208524_10693661	3300026261	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFING
Ga0207990_11063582	3300026262	Marine	VNKDKQLKKITKKYRAGKLEPREDLPEDLKIAIRTFMEQAVIMEE
Ga0207992_10732043	3300026263	Marine	MNKDKEVKRITKKYKAGELEPREDLPEDLKIAIRTFMEQAVIM
Ga0208641_10737021	3300026268	Marine	MNRDKEIKRITKKYKAGELEPRKDLPEDLQIAIRTFMEQVVIMEEYDTDFINGEYMANLIKAF
Ga0256382_11772421	3300028022	Seawater	VNKDKEVKRITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIMEEYNTDYIN
Ga0257108_10666731	3300028190	Marine	MNRDKEVKRITKKYKAGKLEPREELPEDLKIAIKTFM
Ga0257108_10777083	3300028190	Marine	MSKDKDMKVITKKYKAGKLEPREDLPEDLKIAIRTFMEQAVIMEEYNT
Ga0315329_103728043	3300032048	Seawater	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDYINGEYMANLI
Ga0310345_112221301	3300032278	Seawater	MSKDKDMKVITKKYKAGKLEPREDLPEDLKVAIKTFMEQAVIMEE
Ga0310345_117735881	3300032278	Seawater	MNKDKEIKRITKKYKAGELEPREDLPEDLKIAIKTFME
Ga0315334_116092931	3300032360	Seawater	MNKDKEVKRITKKYKAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYN
Ga0310342_1022895573	3300032820	Seawater	MNRDKEIKKITNKYKDGKLEPRDDLPEDLKVAIRTFMEQA
Ga0372840_122159_1_168	3300034695	Seawater	VNKDKQLKKITKKYSAGKLEPREDLPEDLKIAIKTFMEQAVIMEEYDTDFINGEYM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences