Metagenome / Metatranscriptome Family F087327

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087327
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	47 residues
Representative Sequence	PSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF
Number of Associated Samples	45
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine (65.455 % of family members)
Environment Ontology (ENVO)	Unclassified (90.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.67% β-sheet: 0.00% Coil/Unstructured: 61.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13932	GIDA_C	89.09
PF03796	DnaB_C	1.82
PF02951	GSH-S_N	0.91
PF01134	GIDA	0.91
PF12631	MnmE_helical	0.91
PF14403	CP_ATPgrasp_2	0.91
PF00275	EPSP_synthase	0.91
PF00571	CBS	0.91
PF03948	Ribosomal_L9_C	0.91
PF13579	Glyco_trans_4_4	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	1.82
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.82
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.82
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
All Organisms	root	All Organisms	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
cellular organisms	root	All Organisms → cellular organisms	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	22.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	21.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Prochlorococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	21.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
unclassified Prochlorococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus	11.82 %
Prochlorococcus marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Prochlorococcus sp. HOT_208_60	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	10.00 %
Prochlorococcus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	1.82 %
Prochlorococcus marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	1.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001846\|ACM22_1060970	Not Available	1250	Open in IMG/M
3300002040\|GOScombined01_101533792	Not Available	931	Open in IMG/M
3300002040\|GOScombined01_103667009	Not Available	793	Open in IMG/M
3300002040\|GOScombined01_106331550	Not Available	769	Open in IMG/M
3300002040\|GOScombined01_106839218	Not Available	1256	Open in IMG/M
3300005465\|Ga0068474_113840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	3928	Open in IMG/M
3300005465\|Ga0068474_114309	Not Available	1707	Open in IMG/M
3300005510\|Ga0066825_10113884	Not Available	987	Open in IMG/M
3300005606\|Ga0066835_10351066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	514	Open in IMG/M
3300005953\|Ga0066383_10111792	Not Available	821	Open in IMG/M
3300006305\|Ga0068468_1074128	Not Available	2034	Open in IMG/M
3300006305\|Ga0068468_1081846	Not Available	2367	Open in IMG/M
3300006305\|Ga0068468_1086409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	2566	Open in IMG/M
3300006305\|Ga0068468_1090025	Not Available	2535	Open in IMG/M
3300006305\|Ga0068468_1104467	Not Available	2090	Open in IMG/M
3300006305\|Ga0068468_1120034	Not Available	1674	Open in IMG/M
3300006305\|Ga0068468_1137523	Not Available	2368	Open in IMG/M
3300006329\|Ga0068486_1094272	Not Available	839	Open in IMG/M
3300006329\|Ga0068486_1228412	Not Available	741	Open in IMG/M
3300006334\|Ga0099675_1129313	Not Available	1171	Open in IMG/M
3300006334\|Ga0099675_1135438	Not Available	523	Open in IMG/M
3300006334\|Ga0099675_1226085	Not Available	1123	Open in IMG/M
3300006334\|Ga0099675_1265853	Not Available	1396	Open in IMG/M
3300006334\|Ga0099675_1269927	Not Available	1235	Open in IMG/M
3300006334\|Ga0099675_1310092	Not Available	770	Open in IMG/M
3300006334\|Ga0099675_1360775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	580	Open in IMG/M
3300006337\|Ga0068495_1157266	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300006337\|Ga0068495_1175095	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300006337\|Ga0068495_1221712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus	3036	Open in IMG/M
3300006337\|Ga0068495_1242213	Not Available	822	Open in IMG/M
3300006337\|Ga0068495_1261166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	2032	Open in IMG/M
3300006337\|Ga0068495_1278147	Not Available	2030	Open in IMG/M
3300006337\|Ga0068495_1328473	Not Available	1043	Open in IMG/M
3300006337\|Ga0068495_1334417	Not Available	818	Open in IMG/M
3300006337\|Ga0068495_1354814	Not Available	996	Open in IMG/M
3300006337\|Ga0068495_1547899	Not Available	889	Open in IMG/M
3300006345\|Ga0099693_1108918	Not Available	1051	Open in IMG/M
3300006345\|Ga0099693_1129950	Not Available	905	Open in IMG/M
3300006345\|Ga0099693_1136668	Not Available	1763	Open in IMG/M
3300006345\|Ga0099693_1162689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	2222	Open in IMG/M
3300006345\|Ga0099693_1175885	Not Available	1038	Open in IMG/M
3300006345\|Ga0099693_1193035	Not Available	652	Open in IMG/M
3300006345\|Ga0099693_1286962	Not Available	1101	Open in IMG/M
3300006345\|Ga0099693_1319263	Not Available	859	Open in IMG/M
3300006345\|Ga0099693_1364651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	752	Open in IMG/M
3300006350\|Ga0099954_1175407	Not Available	958	Open in IMG/M
3300006350\|Ga0099954_1202124	Not Available	1184	Open in IMG/M
3300006350\|Ga0099954_1268398	Not Available	660	Open in IMG/M
3300006350\|Ga0099954_1472694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	528	Open in IMG/M
3300006351\|Ga0099953_1111775	Not Available	965	Open in IMG/M
3300006351\|Ga0099953_1171239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	561	Open in IMG/M
3300006351\|Ga0099953_1295689	Not Available	866	Open in IMG/M
3300006351\|Ga0099953_1339308	Not Available	945	Open in IMG/M
3300006351\|Ga0099953_1371539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	924	Open in IMG/M
3300006351\|Ga0099953_1376911	Not Available	549	Open in IMG/M
3300006413\|Ga0099963_1105717	Not Available	626	Open in IMG/M
3300006413\|Ga0099963_1149064	Not Available	1753	Open in IMG/M
3300006413\|Ga0099963_1161131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1048	Open in IMG/M
3300006413\|Ga0099963_1173854	Not Available	1604	Open in IMG/M
3300006413\|Ga0099963_1186418	Not Available	831	Open in IMG/M
3300006413\|Ga0099963_1188922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	956	Open in IMG/M
3300006413\|Ga0099963_1237779	Not Available	778	Open in IMG/M
3300006478\|Ga0100224_1010897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	555	Open in IMG/M
3300006480\|Ga0100226_1132285	Not Available	1407	Open in IMG/M
3300006480\|Ga0100226_1143216	Not Available	1231	Open in IMG/M
3300006480\|Ga0100226_1167945	Not Available	1753	Open in IMG/M
3300006480\|Ga0100226_1175496	Not Available	667	Open in IMG/M
3300006480\|Ga0100226_1186262	Not Available	1148	Open in IMG/M
3300006480\|Ga0100226_1197971	Not Available	1058	Open in IMG/M
3300006480\|Ga0100226_1288983	Not Available	1054	Open in IMG/M
3300006480\|Ga0100226_1425148	Not Available	865	Open in IMG/M
3300006480\|Ga0100226_1437238	Not Available	875	Open in IMG/M
3300006480\|Ga0100226_1438631	Not Available	600	Open in IMG/M
3300006481\|Ga0100229_1175779	Not Available	1448	Open in IMG/M
3300006481\|Ga0100229_1199956	Not Available	1242	Open in IMG/M
3300006481\|Ga0100229_1205666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	1276	Open in IMG/M
3300006481\|Ga0100229_1292815	Not Available	717	Open in IMG/M
3300006481\|Ga0100229_1328326	Not Available	970	Open in IMG/M
3300006481\|Ga0100229_1351213	Not Available	800	Open in IMG/M
3300006842\|Ga0068494_157431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	2447	Open in IMG/M
3300006843\|Ga0068496_114588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	18404	Open in IMG/M
3300006843\|Ga0068496_156789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	3867	Open in IMG/M
3300007057\|Ga0101644_1012910	Not Available	941	Open in IMG/M
3300007116\|Ga0101667_1021095	Not Available	1083	Open in IMG/M
3300008097\|Ga0111541_10379584	Not Available	612	Open in IMG/M
3300008855\|Ga0103910_100873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	554	Open in IMG/M
3300008859\|Ga0103906_100958	Not Available	541	Open in IMG/M
3300009790\|Ga0115012_10585591	Not Available	882	Open in IMG/M
3300011302\|Ga0138369_1012407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	579	Open in IMG/M
3300012920\|Ga0160423_10492758	Not Available	833	Open in IMG/M
3300012936\|Ga0163109_10521039	Not Available	871	Open in IMG/M
3300012936\|Ga0163109_10940607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	631	Open in IMG/M
3300012954\|Ga0163111_10472453	Not Available	1151	Open in IMG/M
3300020252\|Ga0211696_1042606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	560	Open in IMG/M
3300020265\|Ga0211533_1068795	Not Available	581	Open in IMG/M
3300020288\|Ga0211619_1052867	Not Available	533	Open in IMG/M
3300020308\|Ga0211693_1006819	Not Available	1238	Open in IMG/M
3300020345\|Ga0211706_1076576	Not Available	683	Open in IMG/M
3300020384\|Ga0211596_10232378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	553	Open in IMG/M
3300020416\|Ga0211644_10376679	Not Available	587	Open in IMG/M
3300020424\|Ga0211620_10461151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp. HOT_208_60	536	Open in IMG/M
3300020441\|Ga0211695_10373572	Not Available	536	Open in IMG/M
3300020442\|Ga0211559_10453455	Not Available	590	Open in IMG/M
3300020449\|Ga0211642_10441049	Not Available	560	Open in IMG/M
3300020457\|Ga0211643_10549276	Not Available	567	Open in IMG/M
3300020468\|Ga0211475_10464903	Not Available	609	Open in IMG/M
3300021542\|Ga0224700_155407	Not Available	941	Open in IMG/M
3300031062\|Ga0073989_13552144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	644	Open in IMG/M
3300031785\|Ga0310343_10939838	Not Available	652	Open in IMG/M
3300031785\|Ga0310343_11170083	Not Available	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	1.82%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.18%
Porifera	Host-Associated → Porifera	1.82%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.18%
Unclassified	Host-Associated → Porifera → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	80.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.64%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified	1.82%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.91%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	69.09%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.73%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.64%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	1.82%
Unclassified	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	65.45%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.45%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.64%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.64%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	1.82%
Cinachyra Sp. (Marine Sponge)	Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Cinachyra Sp. (Marine Sponge)	1.82%
Surface Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water	1.82%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.91%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001846	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25b	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300005465	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0025m	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006305	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025m	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006337	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006350	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m	Environmental	Open in IMG/M
3300006351	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045m	Environmental	Open in IMG/M
3300006413	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0025m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300006480	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0075m	Environmental	Open in IMG/M
3300006481	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0025m	Environmental	Open in IMG/M
3300006842	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_1_0025m	Environmental	Open in IMG/M
3300006843	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_1_0075m	Environmental	Open in IMG/M
3300007057	Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg17ic	Host-Associated	Open in IMG/M
3300007116	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, waterEBis3	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300008855	Microbial communities of surface water sampled in Lagrangian time series from North Pacific Subtropical Gyre - BioLINCS_ESP_3069	Environmental	Open in IMG/M
3300008859	Microbial communities of surface water sampled in Lagrangian time series from North Pacific Subtropical Gyre - BioLINCS_ESP_3010	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300011302	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S23 Surf_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300020252	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX555968-ERR599022)	Environmental	Open in IMG/M
3300020265	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556012-ERR599088)	Environmental	Open in IMG/M
3300020288	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556132-ERR599045)	Environmental	Open in IMG/M
3300020308	Marine microbial communities from Tara Oceans - TARA_B100000530 (ERX556085-ERR599046)	Environmental	Open in IMG/M
3300020345	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)	Environmental	Open in IMG/M
3300020384	Marine microbial communities from Tara Oceans - TARA_B000000441 (ERX556023-ERR599110)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020441	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX556088-ERR599006)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300021542	Marine sponge Cinachyra sp. microbiome, Papua New Guinea CO2seep, Upa-Upasina 'control', cg17ic 200bp no Eukaryotes last	Host-Associated	Open in IMG/M
3300031062	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S21_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACM22_10609701	3300001846	Marine Plankton	VGLPSPSNINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSA*
GOScombined01_1015337922	3300002040	Marine	NFHEPDISGSEFFTKKVEAFSSHKIFGDLKSLLFSALNDCF*
GOScombined01_1036670092	3300002040	Marine	NFHGPEIFGNEFFTKKVEAFSSHKIFGDLKSLLFSALNECF*
GOScombined01_1063315502	3300002040	Marine	NFHGPEIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQT*
GOScombined01_1068392181	3300002040	Marine	IFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0068474_1138404	3300005465	Marine	LVGLPSPSNINFQAPDNFGSEFFTKKVAAFSSHNIFGELKSLLFRALIYHF*
Ga0068474_1143091	3300005465	Marine	SPSNINFQAPDNCGSEFFTKKLEAFSSHNIFGELKSLLFSDLTDYF*
Ga0066825_101138842	3300005510	Marine	KCLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0066835_103510661	3300005606	Marine	VGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFRALTECF*
Ga0066383_101117921	3300005953	Marine	HEPDIFGREFFTKKVEAFSSYKIFGDLKSLLFSALNDCF*
Ga0068468_10741282	3300006305	Marine	VGLPSPSSINFHGPDIFGNEFFTKKLEAFSSHKIFGELKSLLFSALTECF*
Ga0068468_10818463	3300006305	Marine	CLVGLPSPSNINFHGPDIFGSEFFAKKVEAFSSHKIFGELKRLLFSAQTECF*
Ga0068468_10864093	3300006305	Marine	VSSLVKSCRCLVGLPSPSSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALMECF*
Ga0068468_10900253	3300006305	Marine	KSCKCLVGLPSPSSINFHGPEIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0068468_11044672	3300006305	Marine	PSSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALTECF*
Ga0068468_11200342	3300006305	Marine	VGLPSPSSINFHGPDILGNEFFTKKVEAFSSHKIFGDLKSLLFSA*
Ga0068468_11375233	3300006305	Marine	LVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTDCF*
Ga0068486_10942722	3300006329	Marine	VKSWRCLVGLPSPNNINFHEPHIFGKEFSTKKEVAFSSHNIFGELYSLLFSAITNHF*
Ga0068486_12284121	3300006329	Marine	FHGPEIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTEFF*
Ga0099675_11293131	3300006334	Marine	DIFGNEFFTKKVEAFSSHKIFGELKSLFFSALTDCF*
Ga0099675_11354381	3300006334	Marine	GLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALKECF*
Ga0099675_12260851	3300006334	Marine	GLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0099675_12658531	3300006334	Marine	FGNEFFTKKVEAFSSHKIFGELKSLLFSALTDCF*
Ga0099675_12699271	3300006334	Marine	INFHGPDIFGSEFFTRKLEAFSSHKIFGELKSLLFSALTEFF*
Ga0099675_13100922	3300006334	Marine	SSINFHGPDIFGREFFTKKLEAFSSHKIFGELKSLLFSALKGFF*
Ga0099675_13607751	3300006334	Marine	SCKCLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0068495_11572663	3300006337	Marine	LPSPSSINFHGPDIFGSEFFTKKLEAFASHKIFGELKSLLFSALTECF*
Ga0068495_11750951	3300006337	Marine	KSSKCLVGLPSPSSINFHGPDIFGREFFTKKVEAFSSHKIFGELKSLLFSAHT*
Ga0068495_12217124	3300006337	Marine	VGLPSTSSINIHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0068495_12422132	3300006337	Marine	VGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSA*
Ga0068495_12611663	3300006337	Marine	LAKFFFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0068495_12781471	3300006337	Marine	GLPSPSSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALTECF*
Ga0068495_13284732	3300006337	Marine	REEVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHIIFGELKSLLFSAQTDYF*
Ga0068495_13344172	3300006337	Marine	PSPSNNNFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSAQTDCF*
Ga0068495_13548141	3300006337	Marine	VGLPSPSNINFHGPDIYGSEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0068495_15478991	3300006337	Marine	SPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELNSLLFSALTDCF*
Ga0099693_11089182	3300006345	Marine	SSINFHGPDISGNEFFTKKVEAFSSHKIFGELKSLLFSAQSECF*
Ga0099693_11299501	3300006345	Marine	VGLPSPSSINFHGPDIFGREFFTKKLEAFSSHKIFGELKSLLFSALTECF*
Ga0099693_11366681	3300006345	Marine	PSPSSINFHGPDIFGSEFFTKKIEAFSSHKIFGELKSLLFSALTEFF*
Ga0099693_11626893	3300006345	Marine	CLVGLPSPSSINFHGPDILGNEFFTKKVEAFSSHKIFGDLNSLLFSALTECF*
Ga0099693_11758852	3300006345	Marine	SPSSINFHGPDIFGNELFTKKVEAFSSHKIFGDLKSLLFSALTECF*
Ga0099693_11930351	3300006345	Marine	CLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0099693_12869622	3300006345	Marine	LPSPSSINFHGPDIFGSEFFTRKLEAFSSHKIFGELKSLLISALTKCF*
Ga0099693_13192632	3300006345	Marine	LVGLPSPSSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALT*
Ga0099693_13646511	3300006345	Marine	LVGLPSPSNINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSA*
Ga0099954_11754071	3300006350	Marine	PSPSSINFHGPDIFGSEFFTKKVEAFSSHKILGELKSLLFSAQTECF*
Ga0099954_12021241	3300006350	Marine	VGLPSPRSINFHGPDIFGSEFFIKKVEAFSSHNIFGDLKSLLFSAITDCF*
Ga0099954_12683982	3300006350	Marine	CLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKS*
Ga0099954_14726942	3300006350	Marine	FGSEFFTKKVEAFSSHKIFGELKSLLFSALTDCF*
Ga0099953_11117752	3300006351	Marine	LVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0099953_11712392	3300006351	Marine	INFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSAQTECF*
Ga0099953_12956892	3300006351	Marine	NFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSA*
Ga0099953_13393081	3300006351	Marine	LVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTECF*
Ga0099953_13715393	3300006351	Marine	SPSSINFHGPDIFGNEFFTKKEEAFSSHKIFGELKSLLFSAQTECF*
Ga0099953_13769111	3300006351	Marine	VGLPSPSNINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSFLFSAQT*
Ga0099963_11057171	3300006413	Marine	PSSNNFHGPDIFGNEFSTKKVEAFSSHKIFGELKSLLFSALKDCF*
Ga0099963_11490641	3300006413	Marine	SSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALKGCF*
Ga0099963_11611312	3300006413	Marine	LVGLPSPSSINFQGPDIFGSEFFTKKVEAFSSHKIFGELNSLLFSALTVFF*
Ga0099963_11738541	3300006413	Marine	NFHGPDIFGNEFFTKKVEAFSSHKIFGDLNSLLFSAQTECF*
Ga0099963_11864181	3300006413	Marine	PSPSSINFHGPDICGKEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0099963_11889221	3300006413	Marine	LVGLPSPSSINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALKGCF*
Ga0099963_12377791	3300006413	Marine	INFHGPDIFGNELFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0100224_10108971	3300006478	Marine	HEPDISGSEFFTKKVEAFSSHKIFGDLKSLLFSALKDCF*
Ga0100226_11322852	3300006480	Marine	LVGLPSPSSINFHGPDIFGSEFFTKKLEAFSSHRIFGELKSLLFSALTECF*
Ga0100226_11432162	3300006480	Marine	INFHGPDIFGSEFFTRKLEAFSSHKIFGELKSILFSALTECF*
Ga0100226_11679451	3300006480	Marine	GPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAMTDCF*
Ga0100226_11754961	3300006480	Marine	LVKSCKCLVGLPSPSSINFHGPDIFGNEFFTKKLEAFSSHKIFGELKSLLFSALMECF*
Ga0100226_11862622	3300006480	Marine	HGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALKECF*
Ga0100226_11979712	3300006480	Marine	LVGLPSPSNINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSDQTECF*
Ga0100226_12889832	3300006480	Marine	PSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELNSLLFSALAECF*
Ga0100226_14251482	3300006480	Marine	LVGLPSPSNINFHGPDIFGSEFFTKKDEAFSSHKIFGELKSLLFRAQTECY*
Ga0100226_14372382	3300006480	Marine	LPSPSSINFHGPDIFGYEFFTKKVEAFSSHKIFGELKSLLFSAMTDCF*
Ga0100226_14386312	3300006480	Marine	PSSINFHGPDIFGSDFFTKNLDAFSSHKIFGELKSLLISALKESF*
Ga0100229_11757791	3300006481	Marine	SSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSVLFSAQTECF*
Ga0100229_11999562	3300006481	Marine	PSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF*
Ga0100229_12056661	3300006481	Marine	PDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTDCF*
Ga0100229_12928152	3300006481	Marine	IFGNEFFIKKVEAFSSHKIFGELKRLLLSALTECF*
Ga0100229_13283261	3300006481	Marine	SINFHGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALNECF*
Ga0100229_13512132	3300006481	Marine	IFGNEFFTKNVEAFSSHKIFGELKSLFFSALTECF*
Ga0068494_1574311	3300006842	Marine	SCRCLVGLPSPSSINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSVLFSALTDCF*
Ga0068496_11458820	3300006843	Marine	VGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFRALTDCF*
Ga0068496_1567891	3300006843	Marine	HGPDIFGSEFFTKKLEAISSHKIFGELKSVLFSALTECF*
Ga0101644_10129101	3300007057	Cinachyra Sp. (Marine Sponge)	LPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF*
Ga0101667_10210952	3300007116	Volcanic Co2 Seep Seawater	VKSCRCLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSL*
Ga0111541_103795841	3300008097	Marine	CLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAMTDCF*
Ga0103910_1008731	3300008855	Surface Ocean Water	GVFFFFFNEFFTKKVEAFSSHKIFGDLKSLFFSAQKESF*
Ga0103906_1009581	3300008859	Surface Ocean Water	LSPSSINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSALTECF*
Ga0115012_105855912	3300009790	Marine	HDPDIFGKEFFSKKVEAFSSHKILGELKSLLFSALFGYF*
Ga0138369_10124072	3300011302	Marine	PSSINFHGPDILGSEFFTKKIEAFSSHKMFGELKSLLFSDLTECF*
Ga0160423_104927582	3300012920	Surface Seawater	GPDIFGNEFFTKKVEAFSSHKIFGELKSLFFSALMKCF*
Ga0163109_105210392	3300012936	Surface Seawater	PSPSNINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAHTEFF*
Ga0163109_109406071	3300012936	Surface Seawater	SSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQKECC*
Ga0163111_104724531	3300012954	Surface Seawater	NNINFHDPDILGNEFSTKKAVAFSSHKILGELKSLLFSAFKYIFYDDNFFLT*
Ga0211696_10426061	3300020252	Marine	RCLVGLPSPSSINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSAQTECF
Ga0211533_10687951	3300020265	Marine	RCLVGLPSPSSINFHGPDIFGSEFFTKKVEAFSSHKIFGELKSLLFSALTECF
Ga0211619_10528671	3300020288	Marine	PDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALTECF
Ga0211693_10068191	3300020308	Marine	RCLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTECF
Ga0211706_10765762	3300020345	Marine	LVKSCKCLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTECF
Ga0211596_102323782	3300020384	Marine	CLVGLPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSAQTECF
Ga0211644_103766792	3300020416	Marine	VKSCRCLVGLPSPSSINFHGPDIFGNEFFTKKVDAFSSHKIFGELKSLLFSALKDCF
Ga0211620_104611512	3300020424	Marine	INFHGPDIFGSEFFTKKVEAFSSHNIFGELKSLLFSAKTECF
Ga0211695_103735722	3300020441	Marine	PDNFGSEFFTKKVEAFSSHNIFGELKSLLFSALTDYF
Ga0211559_104534552	3300020442	Marine	HGPDIFGSEFFTKKLEAFSSHKIFGELKSLLFSALTDCF
Ga0211642_104410491	3300020449	Marine	FHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALTYYF
Ga0211643_105492761	3300020457	Marine	LPSPNNINFHDPDILGKEFFTKKAEAFSSHKISGELNSVLFSAITSIF
Ga0211475_104649031	3300020468	Marine	LPSPSNINFHAPDIVGKEFATKKVVAFSCHKILGELKSLLFSAVTDIF
Ga0224700_1554071	3300021542	Cinachyra Sp. (Marine Sponge)	LPSPSSINFHGPDIFGNEFFTKKVEAFSSHKIFGDLKSLLFSAQTESF
Ga0073989_135521441	3300031062	Marine	PSSINFHGPDIFGNEFFTKKVEAFSSHKIFGELKSLLFSALKCCF
Ga0310343_109398382	3300031785	Seawater	PSNINFQGPDIFGNEFFTKKVEAFSSHNIFGELKSLLFSALKDCF
Ga0310343_111700832	3300031785	Seawater	CKCLVGLPSPSNINFHGPDIFGSAFLTKKVEAFSSHNIFGELKSLLFSALTDCF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087327

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences