Metagenome Family F087385

Basic Information
Family ID	F087385
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	39 residues
Representative Sequence	VNNAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVTLLL
Number of Associated Samples	107
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.21 %
% of genes near scaffold ends (potentially truncated)	26.36 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Most Common Taxonomy
Group	Bacteria (65.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (6.364 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (32.727 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.15% β-sheet: 0.00% Coil/Unstructured: 84.85%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01569	PAP2	1.82
PF15919	HicB_lk_antitox	1.82
PF00270	DEAD	1.82
PF01791	DeoC	1.82
PF00072	Response_reg	0.91
PF00501	AMP-binding	0.91
PF01979	Amidohydro_1	0.91
PF00534	Glycos_transf_1	0.91
PF13489	Methyltransf_23	0.91
PF00583	Acetyltransf_1	0.91
PF12695	Abhydrolase_5	0.91
PF05717	TnpB_IS66	0.91
PF01661	Macro	0.91
PF08545	ACP_syn_III	0.91
PF04434	SWIM	0.91
PF08695	Coa1	0.91
PF13344	Hydrolase_6	0.91
PF06769	YoeB_toxin	0.91
PF01653	DNA_ligase_aden	0.91
PF02824	TGS	0.91
PF02687	FtsX	0.91
PF08241	Methyltransf_11	0.91
PF00551	Formyl_trans_N	0.91
PF14026	DUF4242	0.91
PF02706	Wzz	0.91
PF13185	GAF_2	0.91
PF12821	ThrE_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.91
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.91
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG4115	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	Defense mechanisms [V]	0.91
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.91
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.45 %
Unclassified	root	N/A	33.64 %
Niallia	genus	Niallia	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.45 %
Unclassified	root	N/A	33.64 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.45 %
Unclassified	root	N/A	33.64 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.27 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.82 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.82 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples	16.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.73 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.91 %
Leptospirales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples	4.55 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.73 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.91 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.91 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %
Leptospiraceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
uncultured Acidobacteriales bacterium HF0200_23L05	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	4.55 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	1.82 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.91 %
Pelagibius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius	0.91 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.91 %
Leptospira	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira	0.91 %
marine Actinobacteria clade	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → marine Actinobacteria clade	0.91 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples	0.91 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.91 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
uncultured Acidobacteriales bacterium HF0200_23L05	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	4.55 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1.82 %
Rossellomorea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Rossellomorea	0.91 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.91 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.91 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.91 %
Pelagibius marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius → Pelagibius marinus	0.91 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Leptospira biflexa	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira biflexa	0.91 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → marine Actinobacteria clade → environmental samples	0.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
uncultured Acidobacteriales bacterium HF0200_23L05	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	4.55 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	0.91 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.91 %
uncultured actinobacterium HF0130_15N16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → marine Actinobacteria clade → environmental samples → uncultured actinobacterium HF0130_15N16	0.91 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	0.91 %
Rossellomorea aquimaris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Rossellomorea → Rossellomorea aquimaris	0.91 %
Leptospira biflexa serovar Patoc	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira biflexa → Leptospira biflexa serovar Patoc	0.91 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.91 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.91 %
Pelagibius marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius → Pelagibius marinus	0.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Acidobacteria bacterium HF4000_26D02	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	16.36 %
uncultured Acidobacteriales bacterium HF0200_23L05	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	4.55 %
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'	strain	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira biflexa → Leptospira biflexa serovar Patoc → Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'	0.91 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.91 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	0.91 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.91 %
uncultured actinobacterium HF0130_15N16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → marine Actinobacteria clade → environmental samples → uncultured actinobacterium HF0130_15N16	0.91 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	0.91 %
Rossellomorea aquimaris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Rossellomorea → Rossellomorea aquimaris	0.91 %
uncultured Desulfobacterales bacterium HF0200_07G10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	0.91 %
Pelagibius marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius → Pelagibius marinus	0.91 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
uncultured bacterium 70	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	0.91 %
uncultured bacterium 59	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Niallia circulans	species	Niallia → Niallia circulans	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2030936001\|Nasutiter_Contig45313	Not Available	731	Open in IMG/M
2070309004\|prs_FIHLEPW02RP30B	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	515	Open in IMG/M
3300005340\|Ga0070689_101583731	Not Available	595	Open in IMG/M
3300006032\|Ga0066696_10000069	All Organisms → cellular organisms → Bacteria	32188	Open in IMG/M
3300006059\|Ga0075017_101350126	Not Available	560	Open in IMG/M
3300006102\|Ga0075015_100414471	Not Available	762	Open in IMG/M
3300006224\|Ga0079037_102200908	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	551	Open in IMG/M
3300006640\|Ga0075527_10037281	Not Available	1303	Open in IMG/M
3300006838\|Ga0101938_1001102	All Organisms → cellular organisms → Bacteria	7446	Open in IMG/M
3300006852\|Ga0075433_10723131	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300006931\|Ga0097620_101769308	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	683	Open in IMG/M
3300009083\|Ga0105047_10049862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	5806	Open in IMG/M
3300009088\|Ga0099830_10129451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Pelagibius → Pelagibius marinus	1920	Open in IMG/M
3300009088\|Ga0099830_11245950	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300009091\|Ga0102851_10709515	Not Available	1065	Open in IMG/M
3300009098\|Ga0105245_10974702	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300009101\|Ga0105247_11516383	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	547	Open in IMG/M
3300009137\|Ga0066709_102413708	Not Available	714	Open in IMG/M
3300009143\|Ga0099792_10546481	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	731	Open in IMG/M
3300009177\|Ga0105248_12425563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	598	Open in IMG/M
3300009448\|Ga0114940_10056960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1747	Open in IMG/M
3300009518\|Ga0116128_1068819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1084	Open in IMG/M
3300009610\|Ga0105340_1121816	Not Available	1060	Open in IMG/M
3300009616\|Ga0116111_1003077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9476	Open in IMG/M
3300009683\|Ga0116224_10413620	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	642	Open in IMG/M
3300009772\|Ga0116162_10009581	All Organisms → cellular organisms → Bacteria → Spirochaetes	5329	Open in IMG/M
3300009839\|Ga0116223_10063675	All Organisms → cellular organisms → Bacteria → Acidobacteria	2376	Open in IMG/M
3300009839\|Ga0116223_10475495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	729	Open in IMG/M
3300009943\|Ga0117933_1535913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	564	Open in IMG/M
3300010037\|Ga0126304_11073661	Not Available	550	Open in IMG/M
3300010042\|Ga0126314_11158849	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	577	Open in IMG/M
3300010044\|Ga0126310_10488960	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → environmental samples → uncultured Desulfobacterales bacterium HF0200_07G10	897	Open in IMG/M
3300010046\|Ga0126384_10103983	Not Available	2102	Open in IMG/M
3300010373\|Ga0134128_12325009	Not Available	590	Open in IMG/M
3300010399\|Ga0134127_10824580	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300011119\|Ga0105246_12031470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	555	Open in IMG/M
3300012001\|Ga0120167_1114384	Not Available	544	Open in IMG/M
3300012360\|Ga0137375_10404465	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 70	1192	Open in IMG/M
3300012505\|Ga0157339_1063858	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	517	Open in IMG/M
3300012906\|Ga0157295_10214022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	623	Open in IMG/M
3300012907\|Ga0157283_10119512	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300012925\|Ga0137419_10119262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1859	Open in IMG/M
3300012929\|Ga0137404_11241111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300012964\|Ga0153916_10824618	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
(restricted) 3300013125\|Ga0172369_10150426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1411	Open in IMG/M
3300013362\|Ga0121694_110032	Niallia → Niallia circulans	569	Open in IMG/M
3300014161\|Ga0181529_10078402	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300014745\|Ga0157377_11092242	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	610	Open in IMG/M
3300014839\|Ga0182027_10139270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2871	Open in IMG/M
3300014969\|Ga0157376_10664185	Not Available	1044	Open in IMG/M
3300015171\|Ga0167648_1106730	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300018019\|Ga0187874_10000322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61402	Open in IMG/M
3300018059\|Ga0184615_10033426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	2847	Open in IMG/M
3300018067\|Ga0184611_1243454	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	637	Open in IMG/M
3300018432\|Ga0190275_10679039	Not Available	1085	Open in IMG/M
3300019880\|Ga0193712_1099499	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Leptospirales → Leptospiraceae → Leptospira → Leptospira biflexa → Leptospira biflexa serovar Patoc → Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'	627	Open in IMG/M
3300020021\|Ga0193726_1000218	All Organisms → cellular organisms → Bacteria	78216	Open in IMG/M
3300020579\|Ga0210407_10034070	All Organisms → cellular organisms → Bacteria	3788	Open in IMG/M
3300021171\|Ga0210405_10047630	Not Available	3397	Open in IMG/M
3300021445\|Ga0182009_10229478	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	914	Open in IMG/M
3300021559\|Ga0210409_11592581	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300022524\|Ga0224534_1072105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300022917\|Ga0247777_1056880	Not Available	1372	Open in IMG/M
3300023251\|Ga0222683_1002301	All Organisms → cellular organisms → Bacteria	4568	Open in IMG/M
3300023263\|Ga0247800_1080098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	638	Open in IMG/M
3300025469\|Ga0208687_1031266	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300025563\|Ga0210112_1013423	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300026035\|Ga0207703_11585236	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	630	Open in IMG/M
3300026035\|Ga0207703_11642349	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	618	Open in IMG/M
3300026088\|Ga0207641_11322116	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300026180\|Ga0209938_1022242	Not Available	2166	Open in IMG/M
3300026216\|Ga0209903_1026369	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 59	924	Open in IMG/M
3300026291\|Ga0209890_10164476	Not Available	730	Open in IMG/M
3300026323\|Ga0209472_1191242	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	715	Open in IMG/M
3300026551\|Ga0209648_10646642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → environmental samples → uncultured Acidobacteriales bacterium HF0200_23L05	579	Open in IMG/M
3300027583\|Ga0209527_1040052	Not Available	1054	Open in IMG/M
3300027690\|Ga0209164_1000001	All Organisms → cellular organisms → Bacteria	1121355	Open in IMG/M
3300027867\|Ga0209167_10354326	Not Available	798	Open in IMG/M
3300027884\|Ga0209275_10206072	Not Available	1065	Open in IMG/M
3300027907\|Ga0207428_10138667	Not Available	1858	Open in IMG/M
3300028173\|Ga0257118_1065910	Not Available	865	Open in IMG/M
3300028380\|Ga0268265_11479087	Not Available	682	Open in IMG/M
3300028381\|Ga0268264_10014996	All Organisms → cellular organisms → Bacteria	6360	Open in IMG/M
3300028717\|Ga0307298_10058804	Not Available	1060	Open in IMG/M
3300029939\|Ga0311328_10327146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300029987\|Ga0311334_10856264	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	750	Open in IMG/M
3300029990\|Ga0311336_10423951	Not Available	1118	Open in IMG/M
3300030496\|Ga0268240_10073336	Not Available	769	Open in IMG/M
3300030518\|Ga0302275_10050493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3116	Open in IMG/M
3300030618\|Ga0311354_10094997	All Organisms → cellular organisms → Bacteria	3340	Open in IMG/M
3300031281\|Ga0307420_1082016	Not Available	1117	Open in IMG/M
3300031660\|Ga0307994_1000067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Rossellomorea → Rossellomorea aquimaris	86583	Open in IMG/M
3300031824\|Ga0307413_11141755	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300031854\|Ga0310904_11269084	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031943\|Ga0310885_10323834	Not Available	802	Open in IMG/M
3300031995\|Ga0307409_102573515	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	537	Open in IMG/M
3300032002\|Ga0307416_103211522	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032144\|Ga0315910_10725211	Not Available	772	Open in IMG/M
3300032174\|Ga0307470_11823453	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	515	Open in IMG/M
3300032179\|Ga0310889_10405503	Not Available	677	Open in IMG/M
3300032180\|Ga0307471_103708181	All Organisms → cellular organisms → Bacteria → Acidobacteria → environmental samples → uncultured Acidobacteria bacterium HF4000_26D02	540	Open in IMG/M
3300032420\|Ga0335397_10071313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	3698	Open in IMG/M
3300032456\|Ga0335394_10120394	All Organisms → cellular organisms → Bacteria	2679	Open in IMG/M
3300032892\|Ga0335081_10748911	Not Available	1176	Open in IMG/M
3300033405\|Ga0326727_10970490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → marine Actinobacteria clade → environmental samples → uncultured actinobacterium HF0130_15N16	625	Open in IMG/M
3300033433\|Ga0326726_10049020	Not Available	3694	Open in IMG/M
3300033482\|Ga0316627_101040731	Not Available	797	Open in IMG/M
3300033485\|Ga0316626_11440982	Not Available	619	Open in IMG/M
3300033513\|Ga0316628_102265037	Not Available	719	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.09%
Host-Associated	Host-Associated	17.27%
Engineered	Engineered	3.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.27%
Aquatic	Environmental → Aquatic	21.82%
Plants	Host-Associated → Plants	16.36%
Wastewater	Engineered → Wastewater	1.82%
Arthropoda	Host-Associated → Arthropoda	0.91%
Lab Enrichment	Engineered → Lab Enrichment	0.91%
Built Environment	Engineered → Built Environment	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.09%
Freshwater	Environmental → Aquatic → Freshwater	11.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Peat	Environmental → Terrestrial → Peat	7.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Sediment	Environmental → Aquatic → Sediment	4.55%
Marine	Environmental → Aquatic → Marine	3.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.91%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.91%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.91%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.91%
City	Engineered → Built Environment → City	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Ice	Environmental → Aquatic → Freshwater → Ice	2.73%
Loam	Environmental → Terrestrial → Soil → Loam	2.73%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Inlet	Environmental → Aquatic → Marine → Inlet	0.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%
Hindgut	Host-Associated → Arthropoda → Digestive System → Hindgut	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.91%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	0.91%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.91%
Subway	Engineered → Built Environment → City → Subway	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.91%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.91%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.91%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%
P3 Segment	Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.91%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	0.91%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.91%
Unclassified	Engineered → Built Environment → City → Subway → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.64%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.73%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.91%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.91%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.91%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.91%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Fe-Si Sediment	0.91%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Sediment	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.91%
Pond Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Termite Hindgut	Host-Associated → Arthropoda → Digestive System → Hindgut → P3 Segment → Termite Hindgut	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.91%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Activated Sludge	0.91%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	0.91%
City Subway Metal/Plastic	Engineered → Built Environment → City → Subway → Unclassified → City Subway Metal/Plastic	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2030936001	Nasutitermes corniger hindgut microbial communities from Florida, USA	Host-Associated	Open in IMG/M
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006838	Combined Assembly of Gp0125106, Gp0125107, Gp0125108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009772	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC105_MetaG	Engineered	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300009943	Combined Assembly of Gp0139325, Gp0139347, Gp0139348	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013125 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25m	Environmental	Open in IMG/M
3300013362	Urban prokaryotic and eukaryotic communities from the subway in New York, USA: city subway metal/plastic -P01505	Engineered	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014830	Activated sludge bacterial and viral communities from EBPR bioreactors in Brisbane, Australia - M92511	Engineered	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023251	Saline water microbial communities from Ace Lake, Antarctica - #1073	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025563	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026180	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_C_D1_MG (SPAdes)	Environmental	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027690	Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028173	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_150m	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031281	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-40	Environmental	Open in IMG/M
3300031660	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Nasutiterm_492870	2030936001	Termite Hindgut	FRQKKPGSYLLSRPSGGRVPSAQEGLTSVFEMGTGVTPPQ
prs_05014970	2070309004	Green-Waste Compost	QPARFNPGNDLLSHIVTNAVPSALEGLTSVFGMGTGVTPPV*SPR
Ga0070689_1015837312	3300005340	Switchgrass Rhizosphere	GSDLLSHAVSRGVPSALVGLTSVFGMGTGVTPPLEGPRRPF*
Ga0066696_100000693	3300006032	Soil	LAFNSAGDDLLSHTVSRAVQSARRGLTAVFGMGTGVTPAV*
Ga0075017_1013501263	3300006059	Watersheds	VGLQNPGSVLLSHKVAPAVPSALESLTSVFGMGTGVTSPV*
Ga0075015_1004144712	3300006102	Watersheds	LFFEIYPGGDLRSHTVTRAVSSAQRGLTTVFGMGTGVTPAM*
Ga0079037_1022009082	3300006224	Freshwater Wetlands	VSLQNPGSVLLSHRVAPTVPLALESLTSVFGMGTGVTSPV*
Ga0075527_100372811	3300006640	Arctic Peat Soil	CRGDSVGDLLSHRVASAVPLAVAGLTSVFGMGTGVALLL*
Ga0101938_100110210	3300006838	Sediment	LILPGGVLLSQKVTLLVPSALEVLTSVFGMGTGVAPPL*
Ga0075433_107231312	3300006852	Populus Rhizosphere	VRINPGDFLLSHAVSRAVPSAPAGLTSVFGMGTGVTLPTKSP
Ga0097620_1017693083	3300006931	Switchgrass Rhizosphere	LFFSNTPGSDLLSHRVSPTVPSAVSGLTSVFGMGTGVTLIL*
Ga0105047_100498622	3300009083	Freshwater	LVSKSGGDLLSQGVYPQVPSAQAVLTSVFGMGTGVTLPL*
Ga0099830_101294512	3300009088	Vadose Zone Soil	MGLLYYAGDHLISHTLTRAVPSAQRGLTSVFGMGTGVTLAV
Ga0099830_112459502	3300009088	Vadose Zone Soil	VFYPGGDLRSHTVTRAVSSALRGLTTVFGMGTGVTPAV
Ga0102851_107095153	3300009091	Freshwater Wetlands	VDTPGSDLLSHRVAPAVPSAVEGLTSVFGMGTGVAPLL*
Ga0105245_109747021	3300009098	Miscanthus Rhizosphere	LLNNPGDFLLSHAVSRAVPSAPAGLTSVFGMGTGVTL
Ga0105247_115163833	3300009101	Switchgrass Rhizosphere	LRNNAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVSLLL*
Ga0066709_1024137083	3300009137	Grasslands Soil	VRNKPGDFLLSHTLARAVPSGLRGLTTVFGMGTGGSLSL*
Ga0099792_105464813	3300009143	Vadose Zone Soil	VNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL*
Ga0105248_124255633	3300009177	Switchgrass Rhizosphere	LINNPGGDLLSHAVTHTVPSAVAGLTSVFGMGTGVTLLL*
Ga0114940_100569602	3300009448	Groundwater	LISKSGGDLLSQGVYPQVPSAQAVLTSVFGMGTGVTLPL*
Ga0116128_10688193	3300009518	Peatland	NPGDDRLSYPDQIGTVPWALEGLTSVFGMGTGVSAPL*
Ga0105340_11218163	3300009610	Soil	LFNTPGSDLLSHAVSHTVPSTVAGLTSVFGMGTGVALLL*
Ga0116111_10030773	3300009616	Peatland	LFEMNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGVTLPL*
Ga0116224_104136202	3300009683	Peatlands Soil	VAFIYAGNDLLSHTVSRAVQSALRGLTSVFGMGTGVSPAVI
Ga0116162_100095814	3300009772	Anaerobic Digestor Sludge	MYYFKPGSVLLSHTVTHAVPSAMRSLTSVFGMGTGVASSL*
Ga0116223_100636751	3300009839	Peatlands Soil	VAFIYAGNDLLSHTVSRAVQSALRGLTSVFGMGTGVSP
Ga0116223_104754952	3300009839	Peatlands Soil	LSEMNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGVT
Ga0117933_15359132	3300009943	Hot Spring Fe-Si Sediment	LEKTPGSDLLSHAAARAVPSAVEGLTSVLGMGTGVTLPLWP
Ga0126304_110736613	3300010037	Serpentine Soil	VSLQNPGSVLLSHRVAPAIPSALKSLTSVFGMGTGVTSPV*
Ga0126314_111588493	3300010042	Serpentine Soil	LNNAGSDLLSHTVSRAVPSAVVGLTSVFGKGTGVTLLL*
Ga0126310_104889603	3300010044	Serpentine Soil	LAMFNSGSDLLSHTVAHAVPSAPKDLTSVFGMGTGVTPSI*
Ga0126384_101039833	3300010046	Tropical Forest Soil	VGLQNPGSVLLSHRVAPAVPSALKSLTSVFGMGTGVTSSV*
Ga0134128_123250092	3300010373	Terrestrial Soil	LLKNNAGDHLISHTLSRAVPSAQRGLTSVFGMGTGGTLAV
Ga0134127_108245802	3300010399	Terrestrial Soil	VRNNPGDFLLSHAVSRAVPSAPAGLTSVFGMGTGVTLPTKSP
Ga0105246_120314703	3300011119	Miscanthus Rhizosphere	LRNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL*
Ga0120167_11143842	3300012001	Permafrost	VNYAGDHLISHTLTRAVPSAQRGLTSVFGMGTGGT
Ga0137375_104044652	3300012360	Vadose Zone Soil	LKNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL*
Ga0157339_10638582	3300012505	Arabidopsis Rhizosphere	LRITAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL*
Ga0157295_102140223	3300012906	Soil	MNNPGSDLLSHAVSHAVPSAVESLTSVFGMGTGVTSLL*
Ga0157283_101195123	3300012907	Soil	MSNPGDDLLFHVVAHEVPSALKGLTSVFGMGTGVTLLL*
Ga0137419_101192622	3300012925	Vadose Zone Soil	LFNPGNYLVSHKVALAVPSAQRGLTSVFGMGTGVALSVR
Ga0137404_112411113	3300012929	Vadose Zone Soil	MNYPGGVLLSHAVARAVSLAMRSLTAVFGMGTGVTSAL*
Ga0153916_108246183	3300012964	Freshwater Wetlands	MGSKNIPGDDLLSHDLTIIVSSALESLTSVFGMGTGVTPPV*
(restricted) Ga0172369_101504263	3300013125	Freshwater	LNPGDDLLSHAVTHAVPSALEGLTSVFGMGTGVTPPL*
Ga0121694_1100321	3300013362	City Subway Metal/Plastic	VPGDVLLSQGENPQLPSALRSLTSVFGMGTGVTFSL
Ga0181529_100784021	3300014161	Bog	MGLLDYAGDHLISHTLTRAVPSAQRSLTSVFGMGTGVTFV
Ga0157377_110922423	3300014745	Miscanthus Rhizosphere	LRNNAGSDLLSHTVSHTVPSAVSGLTSVFGMGTGVTLIL*
Ga0119906_10885133	3300014830	Activated Sludge	LSAKSGGVLLSQGVYPQVPSALAVLTSVFGMGTGVTLPL*
Ga0182027_101392702	3300014839	Fen	LSENNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGVTLPL
Ga0157376_106641853	3300014969	Miscanthus Rhizosphere	VAFRKNPGSDLLSHTVTHAVPSAVAGLTSVFGMGTGVTLLL*
Ga0167648_11067303	3300015171	Glacier Forefield Soil	VLEKSGGVLLSQGVYPQVPLALAVLTSVFGMGTGVTLPL*
Ga0187874_100003223	3300018019	Peatland	LFEMNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGVTLPL
Ga0184615_100334263	3300018059	Groundwater Sediment	LFIIPGGDLLSHTATRAVSSALRGLTSVFGMGTGVTPSA
Ga0184611_12434543	3300018067	Groundwater Sediment	MNNPGSDLLSHTPTHAVPSAVAGLTSVFGMGTGVTLPL
Ga0190275_106790393	3300018432	Soil	MSPQNPGSVLLSHRVAPAVPSALESLTSVFGMGTGVTSPV
Ga0193712_10994993	3300019880	Soil	VGLQNPGSVLLSHRVAPAVPSALKSLTSVFGMGTGVTSSV
Ga0193726_10002183	3300020021	Soil	LNFNPGDDLRSHTVARAVSSAQRGLTSVFGMGTGVTLAV
Ga0210407_100340702	3300020579	Soil	LFFELYPGGDLRSHTVTRAVSSAQRGLTTVFGMGTGVTPAM
Ga0210405_100476304	3300021171	Soil	MTAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVTLLL
Ga0182009_102294783	3300021445	Soil	LLKNTPGSDLLSHTPTRAVPSAVAGLTTVFGMGTGGTLPL
Ga0210409_115925812	3300021559	Soil	LKFNPGGDLRSRAVTRAVSSAQQGLTSVFGMGTGVTL
Ga0224534_10721052	3300022524	Soil	LSQMNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGVTLPL
Ga0247777_10568803	3300022917	Plant Litter	VSLQNPGSVLLSHRVAPAVPLALKSLTSVFGMGTGVTSSE
Ga0222683_10023016	3300023251	Saline Water	VTVYKDGGDLLCHSVAGTVPSARVSLTSVFGMGTGVTLPL
Ga0247800_10800983	3300023263	Soil	VNNAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVTLLL
Ga0208687_10312663	3300025469	Peatland	VSEMNSGDDLLSQGVSPQVPSAQASLTSVFGMGTGVTLPL
Ga0210112_10134233	3300025563	Natural And Restored Wetlands	MGRGGGDLLSHAIARAVPSALRSLTTVFGMGTGVTSSL
Ga0207703_115852363	3300026035	Switchgrass Rhizosphere	LRNNAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVSLLL
Ga0207703_116423493	3300026035	Switchgrass Rhizosphere	LRNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL
Ga0207641_113221162	3300026088	Switchgrass Rhizosphere	VQINPGDFLLSHAVSRAVPSAPAGLTSVFGMGTGVTL
Ga0209938_10222422	3300026180	Pond Soil	LKTGNGLLSHTAARAVPSAQESLTAVFGMGTGVTSLPL
Ga0209903_10263692	3300026216	Soil	LIKNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL
Ga0209890_101644763	3300026291	Soil	LNINPGDDLRSHTVARAVSSARRGLTSVFGMGTGVTLAV
Ga0209472_11912423	3300026323	Soil	MTAGSDLLSHTVSHAVPSAESGLTSVFGMGTGVTLIL
Ga0209648_106466423	3300026551	Grasslands Soil	LVENNPGSDLLSHAVAHAVPSAVASLTSVFGMGTGVTLLL
Ga0209527_10400523	3300027583	Forest Soil	LRNNAGSDLLSHTVSHAVPSAVASLTSVFGMGTGVTLLL
Ga0209164_1000001281	3300027690	Enrichment Culture	MYDANPGSVLLSHTVTRAVPSAMRDLTSVFGMGTGVALSL
Ga0209167_103543262	3300027867	Surface Soil	VAFINAGNDLLSHTLSRAVQSARRGLTSVFGMGTGGSPAV
Ga0209275_102060723	3300027884	Soil	LNNAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVTLLL
Ga0207428_101386673	3300027907	Populus Rhizosphere	VALEKNPGTVLLSHRVSPAVPSALEDFTSVFGMGTGVTPPA
Ga0257118_10659103	3300028173	Marine	LRKTWISGSVLLSHTVSHAVPSALKDFTAVFDMGTGVAPSL
Ga0268265_114790873	3300028380	Switchgrass Rhizosphere	LSFSNTPGSDLLSHRVSPTVPSAVSGLTSVFGMGTGVTLIL
Ga0268264_100149962	3300028381	Switchgrass Rhizosphere	VNNPGDFLLSHAVSRAVPSAPTGLTSVFGMGTGVTL
Ga0307298_100588043	3300028717	Soil	LRINAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL
Ga0311328_103271461	3300029939	Bog	LYEMNSGDDLLSQGVSPQVPSAQAGLTSVFGMGTGV
Ga0311334_108562642	3300029987	Fen	VGLQNPGSVLLSHKVAPAVPSALESLTSVFGMGTGVTSPV
Ga0311336_104239513	3300029990	Fen	VFEKSGGVLLSQGVYPQVPSALAVLTSVFGMGTGVTLPL
Ga0268240_100733363	3300030496	Soil	VITAGSDLLSHTVSHAVPSAVAGLTSVFGMGTGVTLLL
Ga0302275_100504931	3300030518	Bog	MGLLNYAGDHLISHTLTRAVPSAQRGLTSVFGMGTGV
Ga0311354_100949972	3300030618	Palsa	LLTNYAGDHLISHTLTRAVPSAQRGLTSVFGMGTG
Ga0307420_10820163	3300031281	Salt Marsh	MIGCDLLFHTVSHAVPSAHVCLTSVFGMGTGVTTLL
Ga0307994_10000672	3300031660	Marine	LPGDVLLSQGEIPQLPSALKSLTSVFGMGTGVTSSPLSP
Ga0307413_111417551	3300031824	Rhizosphere	VQINPGSDLLSHTPAHAVPSAVAGLTSVFGMGTGVTLPL
Ga0310904_112690843	3300031854	Soil	LVNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGGTLIL
Ga0310885_103238343	3300031943	Soil	LVDVNNPGSDLLSHAVAHAVPSAVASLTSVFGMGTGVTLLL
Ga0307409_1025735152	3300031995	Rhizosphere	LENTPGSDLLSHALTHAVPSAVEGLTSVFGMGTGVTPLL
Ga0307416_1032115223	3300032002	Rhizosphere	LDNIPGSDLLSHRPAPAVPSAVEGLTSVFGMGTGVTLLL
Ga0315910_107252113	3300032144	Soil	LRIIPGSDLLSHKAALAVPSAVEGLTSVFGMGTGVTLLL
Ga0307470_118234533	3300032174	Hardwood Forest Soil	VCLTAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL
Ga0310889_104055033	3300032179	Soil	LFFSNTPGSDLLSHRVSPTVPSAVSGLTSVFGMGTGVTLIL
Ga0307471_1037081813	3300032180	Hardwood Forest Soil	MNNAGSDLLSHTVSHAVPSAVSGLTSVFGMGTGVTLIL
Ga0335397_100713133	3300032420	Freshwater	LNSKSGGDLLSQGVYPQVPSAQAVLTSVFGMGTGVTLPL
Ga0335394_101203943	3300032456	Freshwater	LISKSGGDLLSQGVYPQVPSAQAVLTSVFGMGTGVTLPL
Ga0335081_107489111	3300032892	Soil	CFRSVAFIYAGDDLRSHTLSRAVPSALRGLTSVFGMGTGV
Ga0326727_109704902	3300033405	Peat Soil	LSEMNSGDVLLSQGVSPQVPSAQAGLTSVFGMGTGVTLSL
Ga0326726_100490203	3300033433	Peat Soil	VLEKSGGVLLSQGVYPQVPSALAVLTSVFGMGTGVTLPL
Ga0316627_1010407313	3300033482	Soil	VSLQNPGIVLLSHRVAPAVPLALESLTSVFGMGTGVTSPV
Ga0316626_114409823	3300033485	Soil	LKTKKIPGNDLLSHPHPGAVPSALEGLTSVFGMGTGVTPPP
Ga0316628_1022650373	3300033513	Soil	LFHLNPGGDLLSHTAARAVPSALKGLTSVFEMGTGVTPSA

Hidden Markov Model


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