Metagenome / Metatranscriptome Family F087428

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087428
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	62 residues
Representative Sequence	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.45 %
% of genes near scaffold ends (potentially truncated)	15.45 %
% of genes from short scaffolds (< 2000 bps)	79.09 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (47.273 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (68.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.91% β-sheet: 6.52% Coil/Unstructured: 44.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08291	Peptidase_M15_3	38.18
PF01075	Glyco_transf_9	10.00
PF00959	Phage_lysozyme	4.55
PF13884	Peptidase_S74	2.73
PF13550	Phage-tail_3	1.82
PF11753	DUF3310	0.91
PF00149	Metallophos	0.91
PF13489	Methyltransf_23	0.91
PF02794	HlyC	0.91
PF09636	XkdW	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	10.00
COG2994	ACP:hemolysin acyltransferase (hemolysin-activating protein)	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.91 %
Unclassified	root	N/A	47.27 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Viruses	superkingdom	All Organisms → Viruses	31.82 %
cellular organisms	root	All Organisms → cellular organisms	19.09 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.73 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.82 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.73 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.82 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.73 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	11.82 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.73 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	11.82 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.82 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.91 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Marinovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum	11.82 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	0.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %
uncultured phage MedDCM-OCT-S09-C5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S09-C5	0.91 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
unclassified Marinovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum	11.82 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
Pelagivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus	0.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %
uncultured phage MedDCM-OCT-S09-C5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S09-C5	0.91 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.73 %
Marinovum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	11.82 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	1.82 %
Pelagivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus	0.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.91 %
uncultured phage MedDCM-OCT-S09-C5	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S09-C5	0.91 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10155081	Not Available	675	Open in IMG/M
3300000116\|DelMOSpr2010_c10035319	All Organisms → Viruses → Predicted Viral	2299	Open in IMG/M
3300000116\|DelMOSpr2010_c10046112	Not Available	1936	Open in IMG/M
3300000116\|DelMOSpr2010_c10075580	All Organisms → Viruses	1352	Open in IMG/M
3300000116\|DelMOSpr2010_c10118128	Not Available	963	Open in IMG/M
3300000116\|DelMOSpr2010_c10164922	Not Available	743	Open in IMG/M
3300000117\|DelMOWin2010_c10107370	All Organisms → Viruses	1006	Open in IMG/M
3300000117\|DelMOWin2010_c10118982	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300000149\|LPaug09P1610mDRAFT_c1000818	Not Available	5487	Open in IMG/M
3300000149\|LPaug09P1610mDRAFT_c1001502	All Organisms → Viruses → Predicted Viral	3899	Open in IMG/M
3300001450\|JGI24006J15134_10011175	Not Available	4398	Open in IMG/M
3300001472\|JGI24004J15324_10056924	Not Available	1139	Open in IMG/M
3300003427\|JGI26084J50262_1088697	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005239\|Ga0073579_1029519	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300005613\|Ga0074649_1012302	Not Available	5758	Open in IMG/M
3300005613\|Ga0074649_1098754	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300005747\|Ga0076924_1161661	All Organisms → Viruses	605	Open in IMG/M
3300005931\|Ga0075119_1086203	All Organisms → Viruses	707	Open in IMG/M
3300006026\|Ga0075478_10110503	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006193\|Ga0075445_10278409	Not Available	569	Open in IMG/M
3300006403\|Ga0075514_1229102	Not Available	526	Open in IMG/M
3300006637\|Ga0075461_10126794	Not Available	791	Open in IMG/M
3300006735\|Ga0098038_1086112	Not Available	1097	Open in IMG/M
3300006735\|Ga0098038_1227195	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300006802\|Ga0070749_10279783	Not Available	939	Open in IMG/M
3300006922\|Ga0098045_1038902	Not Available	1204	Open in IMG/M
3300006929\|Ga0098036_1176911	All Organisms → Viruses	650	Open in IMG/M
3300006947\|Ga0075444_10208904	Not Available	785	Open in IMG/M
3300007074\|Ga0075110_1121025	Not Available	531	Open in IMG/M
3300007539\|Ga0099849_1226290	Not Available	695	Open in IMG/M
3300008219\|Ga0114905_1093414	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300009000\|Ga0102960_1086979	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300009433\|Ga0115545_1132587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	880	Open in IMG/M
3300009466\|Ga0126448_1032429	All Organisms → Viruses → Predicted Viral	1227	Open in IMG/M
3300009474\|Ga0127390_1120136	Not Available	682	Open in IMG/M
3300009481\|Ga0114932_10034194	unclassified Hyphomonas → Hyphomonas sp.	3363	Open in IMG/M
3300009496\|Ga0115570_10121090	Not Available	1253	Open in IMG/M
3300009508\|Ga0115567_10242785	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300010300\|Ga0129351_1110876	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300010318\|Ga0136656_1231657	All Organisms → Viruses	612	Open in IMG/M
3300011254\|Ga0151675_1009264	All Organisms → Viruses	601	Open in IMG/M
3300012524\|Ga0129331_1183725	All Organisms → Viruses	544	Open in IMG/M
3300017710\|Ga0181403_1020953	Not Available	1387	Open in IMG/M
3300017710\|Ga0181403_1079323	Not Available	682	Open in IMG/M
3300017713\|Ga0181391_1074253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	781	Open in IMG/M
3300017714\|Ga0181412_1000838	Not Available	12330	Open in IMG/M
3300017717\|Ga0181404_1002546	Not Available	5200	Open in IMG/M
3300017717\|Ga0181404_1142989	Not Available	578	Open in IMG/M
3300017717\|Ga0181404_1153722	Not Available	555	Open in IMG/M
3300017719\|Ga0181390_1093579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	813	Open in IMG/M
3300017719\|Ga0181390_1155565	Not Available	572	Open in IMG/M
3300017724\|Ga0181388_1062949	Not Available	889	Open in IMG/M
3300017737\|Ga0187218_1111371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	654	Open in IMG/M
3300017743\|Ga0181402_1019137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1971	Open in IMG/M
3300017745\|Ga0181427_1042640	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300017751\|Ga0187219_1025324	Not Available	2125	Open in IMG/M
3300017753\|Ga0181407_1029385	Not Available	1488	Open in IMG/M
3300017755\|Ga0181411_1003439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	5563	Open in IMG/M
3300017758\|Ga0181409_1143168	Not Available	701	Open in IMG/M
3300017760\|Ga0181408_1046993	Not Available	1160	Open in IMG/M
3300017762\|Ga0181422_1004786	All Organisms → Viruses → Predicted Viral	4577	Open in IMG/M
3300017762\|Ga0181422_1059952	Not Available	1213	Open in IMG/M
3300017771\|Ga0181425_1017547	Not Available	2382	Open in IMG/M
3300017782\|Ga0181380_1193070	Not Available	685	Open in IMG/M
3300017951\|Ga0181577_10936073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	514	Open in IMG/M
3300017963\|Ga0180437_11147778	Not Available	554	Open in IMG/M
3300017969\|Ga0181585_11003149	Not Available	532	Open in IMG/M
3300018080\|Ga0180433_10282150	All Organisms → Viruses	1316	Open in IMG/M
3300018424\|Ga0181591_11187852	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300018426\|Ga0181566_10659381	Not Available	722	Open in IMG/M
3300019751\|Ga0194029_1058870	All Organisms → Viruses	642	Open in IMG/M
3300020365\|Ga0211506_1118750	Not Available	747	Open in IMG/M
3300020404\|Ga0211659_10089561	All Organisms → Viruses → Predicted Viral	1426	Open in IMG/M
3300020417\|Ga0211528_10041878	unclassified Hyphomonas → Hyphomonas sp.	2054	Open in IMG/M
3300020438\|Ga0211576_10177684	Not Available	1141	Open in IMG/M
3300021347\|Ga0213862_10218287	Not Available	672	Open in IMG/M
3300021356\|Ga0213858_10275586	Not Available	806	Open in IMG/M
3300021365\|Ga0206123_10172262	Not Available	979	Open in IMG/M
3300021373\|Ga0213865_10076411	All Organisms → Viruses → Predicted Viral	1818	Open in IMG/M
3300021957\|Ga0222717_10078873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	2086	Open in IMG/M
3300021958\|Ga0222718_10003412	All Organisms → cellular organisms → Bacteria	13662	Open in IMG/M
3300021958\|Ga0222718_10307161	All Organisms → Viruses	821	Open in IMG/M
3300021958\|Ga0222718_10334503	All Organisms → Viruses	775	Open in IMG/M
3300021964\|Ga0222719_10043129	All Organisms → Viruses	3473	Open in IMG/M
3300021964\|Ga0222719_10167683	Not Available	1532	Open in IMG/M
3300021964\|Ga0222719_10414264	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus	834	Open in IMG/M
3300022057\|Ga0212025_1056660	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300022065\|Ga0212024_1019158	Not Available	1104	Open in IMG/M
3300022187\|Ga0196899_1095955	All Organisms → Viruses	885	Open in IMG/M
3300022822\|Ga0222646_113253	All Organisms → Viruses → Predicted Viral	1042	Open in IMG/M
3300022843\|Ga0222631_1033888	All Organisms → Viruses	689	Open in IMG/M
3300022851\|Ga0222691_1004829	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2961	Open in IMG/M
3300023235\|Ga0222634_1005946	Not Available	2749	Open in IMG/M
3300025083\|Ga0208791_1084084	Not Available	512	Open in IMG/M
3300025086\|Ga0208157_1103023	Not Available	683	Open in IMG/M
3300025102\|Ga0208666_1107120	Not Available	680	Open in IMG/M
3300025120\|Ga0209535_1209542	Not Available	537	Open in IMG/M
3300025137\|Ga0209336_10045390	Not Available	1389	Open in IMG/M
3300025137\|Ga0209336_10154039	Not Available	606	Open in IMG/M
3300025138\|Ga0209634_1003700	Not Available	10227	Open in IMG/M
3300025138\|Ga0209634_1009864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S09-C5	5821	Open in IMG/M
3300025276\|Ga0208814_1102618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	716	Open in IMG/M
3300025425\|Ga0208646_1036278	All Organisms → Viruses	1022	Open in IMG/M
3300025671\|Ga0208898_1020242	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2957	Open in IMG/M
3300025853\|Ga0208645_1065873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1644	Open in IMG/M
3300025889\|Ga0208644_1005271	All Organisms → Viruses	9573	Open in IMG/M
3300025890\|Ga0209631_10157331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1216	Open in IMG/M
3300027672\|Ga0209383_1039211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1852	Open in IMG/M
3300032277\|Ga0316202_10033889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	2441	Open in IMG/M
3300034418\|Ga0348337_092313	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.36%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	10.91%
Unclassified	Environmental → Aquatic → Unclassified	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	20.00%
Coastal	Environmental → Aquatic → Marine → Coastal	18.18%
Oceanic	Environmental → Aquatic → Marine → Oceanic	17.27%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.64%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	9.09%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.18%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.55%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.64%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.82%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.82%
River	Environmental → Aquatic → Freshwater → River	0.91%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	20.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.27%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.64%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.64%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.64%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.82%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	1.82%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.82%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.91%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	20.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.73%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.82%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	7.27%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.36%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.36%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.64%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	3.64%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.73%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.73%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	2.73%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.82%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.82%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	1.82%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.82%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	1.82%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.91%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.91%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.91%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.91%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.91%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.91%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000149	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10m	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300003427	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA	Environmental	Open in IMG/M
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005931	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007074	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009466	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009474	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300011254	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022822	Saline water microbial communities from Ace Lake, Antarctica - #293	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300022851	Saline water microbial communities from Ace Lake, Antarctica - #1237	Environmental	Open in IMG/M
3300023235	Saline water microbial communities from Ace Lake, Antarctica - #50	Environmental	Open in IMG/M
3300025083	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025425	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_101550812	3300000115	Marine	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK*
DelMOSpr2010_100353193	3300000116	Marine	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATDKPKEK*
DelMOSpr2010_100461121	3300000116	Marine	MITIDGKEYKKEKMSDEQVKLFGIISNLSKEKNAYLNQAEQKEILIQHYIGKFKEAKTKEQK*
DelMOSpr2010_100755803	3300000116	Marine	MITIDGEEFKKEKMSDEQVKLFGIISNLNQTKETHLLEAKQTEILIQHYITKFKEITPK*
DelMOSpr2010_101181285	3300000116	Marine	MITIDGTEYTKEKMSDEQVKLFGIISNLNQRKQSHLLEAEQTEIIIQHYITKFKEATK*
DelMOSpr2010_101649223	3300000116	Marine	MITIDGQEYKKEEMSEDQIRIFGIISNLNQRKNSHLFEAEQSEILIQHYIGEFKKATKSE
DelMOWin2010_101073703	3300000117	Marine	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAYLNQAEQKEILIQHYIGKFKE
DelMOWin2010_101189824	3300000117	Marine	LMITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTQEQK*
LPaug09P1610mDRAFT_10008184	3300000149	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPKEK*
LPaug09P1610mDRAFT_100150210	3300000149	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATEKPEKEK*
JGI24006J15134_100111754	3300001450	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYITKFKKATDKPKEK*
JGI24004J15324_100569242	3300001472	Marine	MITIDGKEYVKEKMSDEQTQLFGIISNLSNEKQEHTRKAEQKEILIQHYITKFKEATEKPEKEK*
JGI26084J50262_10886972	3300003427	Marine	KEYKKDMMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTKEQK*
Ga0073579_10295192	3300005239	Marine	MITIDGKEYAREKMSDEQLQLFGIISNLSNDKQEHLKKAEQKEILIQHYITKFKEATDKPKEK*
Ga0074649_10123022	3300005613	Saline Water And Sediment	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTQEQK*
Ga0074649_10987542	3300005613	Saline Water And Sediment	MITIDGTEYTKEKMSDEQVKLFGIISNLNQKKQTYLQEAEQTEIVIQHYISKFKDAVKK*
Ga0076924_11616612	3300005747	Marine	MITIDGKEYKKDMMSDEQVKLFGIITNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTKEQK*
Ga0075119_10862032	3300005931	Saline Lake	MITIDGKEYKKEKMSDEQVKLFGIISNLSNEKNSHLNQAEQKEIIIQHYITKFKEIIPK*
Ga0075478_101105033	3300006026	Aqueous	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEDK*
Ga0075445_102784091	3300006193	Marine	LHSLMITIDGEEFKKEKMSDEQMKLFGIISNLNQTKETHLLEAEQDEILIQHYITKFKEITPK*
Ga0075514_12291022	3300006403	Aqueous	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK*
Ga0075461_101267943	3300006637	Aqueous	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKP
Ga0098038_10861123	3300006735	Marine	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKESTDKPEKEK*
Ga0098038_12271952	3300006735	Marine	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKQEHIQKAEQKEILIQHYITKFKEVTSKKEKT*
Ga0070749_102797833	3300006802	Aqueous	MITIDGKEYTKEKMSDEQVKLFGIISNLNQRKQSHLLEAEQTEIIIQHYITKFKEATK*
Ga0098045_10389022	3300006922	Marine	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKEATDKPEKEK*
Ga0098036_11769113	3300006929	Marine	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKEATDKPEDK*
Ga0075444_102089042	3300006947	Marine	MITIDGEEFKKEKMSDEQMKLFGIISNLNQTKETHLLETKQTEILIQHYITKFKEITPK*
Ga0075110_11210252	3300007074	Saline Lake	MITIDGKEYKKEKMSDEQVKLFGIISNLNQTKETHLLEAKQDEILIQHYITKFKEITPK*
Ga0099849_12262901	3300007539	Aqueous	MITIDGTEYTKEKMSDEQVKLFGIISNLNQRKQSHLLEAEQTEIIIQHYIGEFKKATKSE
Ga0114905_10934142	3300008219	Deep Ocean	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYISKFKEATNKTEVK*
Ga0102960_10869794	3300009000	Pond Water	MITIDGKEYTKEKMSDDKLKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATSSKEEKT*
Ga0115545_11325872	3300009433	Pelagic Marine	MITIDGKEYAKEKMSDDQVKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATEKPKEK*
Ga0126448_10324295	3300009466	Meromictic Pond	MITIDGQEYKKEEMSDEQVKLFGVISNLNQRKQSHLFEAEQTEILIQHYISKFKDVTK*
Ga0127390_11201363	3300009474	Meromictic Pond	LRREQEEYKKEEMSDEQVKLFGVISNLNQRKQSHLFEAEQTEILIQHYISKFKDVTK*
Ga0114932_100341944	3300009481	Deep Subsurface	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKKEHIQKAEQKEILIQHYITKFKEVTSKKEKT*
Ga0115570_101210902	3300009496	Pelagic Marine	MITIDGKEYAKEKMSDDQVKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATEKPEKEK*
Ga0115567_102427853	3300009508	Pelagic Marine	MITIDGKEYAKEKMSDDQVKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATEKPEDK*
Ga0129351_11108762	3300010300	Freshwater To Marine Saline Gradient	MITIDGTEYTKEKMSDKQVKLFGIISNLNQRKQSHLLEAEQTEIIIQHYITKFKEATK*
Ga0136656_12316572	3300010318	Freshwater To Marine Saline Gradient	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAYLNQAEQKEILIQHYIGKFKEAKTQEQK*
Ga0151675_10092642	3300011254	Marine	MITIDGKEYTREKMSDEQLQLFGMISSLSNKKQEHIQKAEQKEILIQHYITKFKEVTNKPEKEK*
Ga0129331_11837251	3300012524	Aqueous	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATEKPEKEK*
Ga0181403_10209533	3300017710	Seawater	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKEATEKPEKEK
Ga0181403_10793233	3300017710	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYIIKFKKATDKP
Ga0181391_10742532	3300017713	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYIIKFKKATDKPKEK
Ga0181412_100083813	3300017714	Seawater	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKESTDKQEKEK
Ga0181404_10025464	3300017717	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATDKPEKEK
Ga0181404_11429892	3300017717	Seawater	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPKEK
Ga0181404_11537223	3300017717	Seawater	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKEATDKP
Ga0181390_10935792	3300017719	Seawater	MITIDGKEYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYIIKFKKATDKPKEK
Ga0181390_11555652	3300017719	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYIIKFKKATDKPKEK
Ga0181388_10629492	3300017724	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYIIKFKKATEKPEKEK
Ga0187218_11113712	3300017737	Seawater	YAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYIIKFKKATDKPKEK
Ga0181402_10191373	3300017743	Seawater	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPEKEK
Ga0181427_10426401	3300017745	Seawater	MITIDGKEYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPEKEK
Ga0187219_10253246	3300017751	Seawater	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATEKPEKEK
Ga0181407_10293852	3300017753	Seawater	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATDKPEKEK
Ga0181411_10034395	3300017755	Seawater	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKQEHIQKAEQKEILIQHYITKFKEVTNKPEKEK
Ga0181409_11431681	3300017758	Seawater	KVTQQVKEYMITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPEKEK
Ga0181408_10469932	3300017760	Seawater	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATDKPKEK
Ga0181422_10047864	3300017762	Seawater	MITIDGKEYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATEKPEKEK
Ga0181422_10599523	3300017762	Seawater	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKKEHIQKAEQKEILIQHYITKFKEVTSKKEKT
Ga0181425_10175473	3300017771	Seawater	MITIDGKEYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATDKPEKEK
Ga0181380_11930702	3300017782	Seawater	MITIDGKEYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYITKFKKATEKPEKEK
Ga0181577_109360732	3300017951	Salt Marsh	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATEKPES
Ga0180437_111477782	3300017963	Hypersaline Lake Sediment	MITIDGKEYRKEKMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAVPKEEK
Ga0181585_110031492	3300017969	Salt Marsh	MITIDGKEYTKEKMSDEQVKLFGIISNLNQRKHSHLQEAEQTEIIIQHYIGEFKKATK
Ga0180433_102821502	3300018080	Hypersaline Lake Sediment	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTKEQK
Ga0181591_111878522	3300018424	Salt Marsh	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAYLNQAEQKEILIQHYIGKFKEAKTQEQK
Ga0181566_106593811	3300018426	Salt Marsh	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKF
Ga0194029_10588702	3300019751	Freshwater	MITIDGKEYKKDMMSDEQVKLFGIITNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKTKEQK
Ga0211506_11187501	3300020365	Marine	MITIDGKEYTKEKMSDEQLQLFGIISSLSNKKQEHIQKAEQKEILIQHYIGKFKEATKKPES
Ga0211659_100895611	3300020404	Marine	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKQEHIQKAEQKEILIQHYITKFKEVTSKKEKT
Ga0211528_100418782	3300020417	Marine	MITIDGQKYTKEKMSDDQLKLFGIISKLNDEKKELIFKAEQKEHSIQHYIGEFKKLTKKE
Ga0211576_101776843	3300020438	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATDKPEKEK
Ga0213862_102182873	3300021347	Seawater	MITIDGKEYTKEKMSDDQLKLFGIISNLSSEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK
Ga0213858_102755861	3300021356	Seawater	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGLFKE
Ga0206123_101722623	3300021365	Seawater	MITIDGKEYAKEKMSDDQVKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATEKPKEK
Ga0213865_100764112	3300021373	Seawater	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEDK
Ga0222717_100788734	3300021957	Estuarine Water	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKESTDKPEKEK
Ga0222718_100034125	3300021958	Estuarine Water	MITIDGKEYKKEKMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAVPDD
Ga0222718_103071611	3300021958	Estuarine Water	MITIDGTEYTKEKMSDEQIKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAKSEEEQK
Ga0222718_103345032	3300021958	Estuarine Water	MITIDGTEYTKEKMSDEQIKLFGIISNLSNEKNAHIYQAEQKEILIQHYIGKFKEAKSEEEQK
Ga0222719_100431291	3300021964	Estuarine Water	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKE
Ga0222719_101676833	3300021964	Estuarine Water	MITIDGKEYKKEKMSDEQVKLFGIISNLSNEKNAHLNQAEQKEILIQHYIGKFKEAVPKEEK
Ga0222719_104142643	3300021964	Estuarine Water	MITIDGQEYKKEEMSEDQIRIFGTISNLNQRKHSHLQEAEQAEILIQHYIGEFKKATKSE
Ga0212025_10566602	3300022057	Aqueous	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAHINQAEQKEILIQHYIGKFKEAKTQEQK
Ga0212024_10191583	3300022065	Aqueous	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK
Ga0196899_10959551	3300022187	Aqueous	MITIDGKEYKKDMMSDEQVKLFGIISNLSNEKNAYLNQAEQKEILIQHYIG
Ga0222646_1132533	3300022822	Saline Water	MITIDGKEYKKEKMSDEQVKLFGIISNLNQTKETHLLEAKQDEILIQHYITKFKEITPK
Ga0222631_10338881	3300022843	Saline Water	MITIDGEEFKKEQMSDEQVKLFGIISNLNQTKQTHLLEAEQTEILIQHYITKFKEITPK
Ga0222691_10048294	3300022851	Saline Water	MITIDGKEYKKEKMSDEQVKLFGIISNLNQTKETHLLEAKQTEILIQHYITKFKEITPK
Ga0222634_10059464	3300023235	Saline Water	MITIDGKEYKKEKMSDEQVKLFGIISNLNQTKQTHLLEAEQTEILIQHYITRFKEITPK
Ga0208791_10840842	3300025083	Marine	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKEATDKPEKEK
Ga0208157_11030231	3300025086	Marine	MITIDGKEYTREKMSDEQVQLFGIISSLSNKKQEHIQKAEQKEILIQHYITKFKEVTSKKEK
Ga0208666_11071202	3300025102	Marine	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKNVHINQAEQKEILIQHYITKFKESTDKPEKEK
Ga0209535_12095422	3300025120	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKKATEKPEKEK
Ga0209336_100453903	3300025137	Marine	MITIDGKEYVKEKMSDEQTQLFGIISNLSNEKQEHTRKAEQKEILIQHYITKFKEATEKPEKEK
Ga0209336_101540392	3300025137	Marine	IYMITIDGKDYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYITKFKKATDKPKEK
Ga0209634_100370016	3300025138	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNEKQEHLRKAEQKEILIQHYITKFKKATDKPKEK
Ga0209634_10098642	3300025138	Marine	MITIDGKDYAREKMSDEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATEKPEKEK
Ga0208814_11026182	3300025276	Deep Ocean	MITIDGEEFKKEKMSDEQMKLFGIISNLNQTKETHLLETKQTEILIQHYITKFKEITPK
Ga0208646_10362782	3300025425	Saline Lake	MITIDGKEYKKEKMSDEQVKLFGIISNLNQTKQTHLLEAEQTEILIQHYITKFKEITPK
Ga0208898_10202423	3300025671	Aqueous	MITIDGKEYTKEKMSDDQLKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEDK
Ga0208645_10658733	3300025853	Aqueous	MITIDGKEYTKEKMSDDQVKLFGIISNLSAEKQAHINQAEQKEILIQHYIGKFKEATDKPEKEK
Ga0208644_10052719	3300025889	Aqueous	MITIDGKEYTKEKMSDEQVKLFGIISNLNQRKQSHLLEAEQTEIIIQHYITKFKEATK
Ga0209631_101573313	3300025890	Pelagic Marine	MITIDGKEYAKEKMSDDQVKLFGIISNLSAEKNAHINQAEQKEILIQHYITKFKEATDKPKKEK
Ga0209383_10392113	3300027672	Marine	MITIDGEEFKKEKMSDEQMKLFGIISNLNQTKETHLLEAEQDEILIQHYITKFKEITPK
Ga0316202_100338894	3300032277	Microbial Mat	MITIDGKDYAREKMSNEQLQLFGIISNLSNDKQEHLRKAEQKEILIQHYITKFKEATEKPEKEK
Ga0348337_092313_121_303	3300034418	Aqueous	MITIDGTEYTKEKMSDEQVKLFGIISNLNQRKHSHLQEAEQTEILIQHYIGEFKKATKSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences