Metagenome / Metatranscriptome Family F087491

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087491
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	46 residues
Representative Sequence	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVN
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	94.55 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.909 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.59% β-sheet: 0.00% Coil/Unstructured: 55.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00440	TetR_N	86.36
PF00392	GntR	1.82
PF07702	UTRA	1.82
PF12900	Pyridox_ox_2	0.91
PF13655	RVT_N	0.91
PF04978	DUF664	0.91
PF00881	Nitroreductase	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.45 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.91 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.27 %
Unclassified	root	N/A	27.27 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	7.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	7.27 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7.27 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001632\|JGI20235J16296_1001149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1023	Open in IMG/M
3300004268\|Ga0066398_10147594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300005435\|Ga0070714_102378535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	515	Open in IMG/M
3300005438\|Ga0070701_11066149	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005445\|Ga0070708_100595303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042	Open in IMG/M
3300005467\|Ga0070706_100883518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300005610\|Ga0070763_10795349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	558	Open in IMG/M
3300005614\|Ga0068856_102531790	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005764\|Ga0066903_101778677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1176	Open in IMG/M
3300006028\|Ga0070717_10200472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1748	Open in IMG/M
3300006028\|Ga0070717_10384472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1259	Open in IMG/M
3300006059\|Ga0075017_101049078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	636	Open in IMG/M
3300006176\|Ga0070765_101006113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300006871\|Ga0075434_101601447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300009137\|Ga0066709_103313664	Not Available	586	Open in IMG/M
3300009147\|Ga0114129_10770657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300009792\|Ga0126374_11295237	Not Available	588	Open in IMG/M
3300009792\|Ga0126374_11853647	Not Available	506	Open in IMG/M
3300010043\|Ga0126380_11963482	Not Available	534	Open in IMG/M
3300010048\|Ga0126373_12353010	Not Available	593	Open in IMG/M
3300010048\|Ga0126373_12380423	Not Available	589	Open in IMG/M
3300010048\|Ga0126373_12974429	Not Available	528	Open in IMG/M
3300010359\|Ga0126376_12403415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	574	Open in IMG/M
3300010360\|Ga0126372_10254315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1510	Open in IMG/M
3300010360\|Ga0126372_11745304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300010361\|Ga0126378_11373406	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010361\|Ga0126378_11716478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300010361\|Ga0126378_12252412	Not Available	622	Open in IMG/M
3300010379\|Ga0136449_100268177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3150	Open in IMG/M
3300010398\|Ga0126383_11532835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300010399\|Ga0134127_10163091	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300012210\|Ga0137378_10552164	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300012210\|Ga0137378_11146387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300012960\|Ga0164301_11596725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300012971\|Ga0126369_10593420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300012971\|Ga0126369_11486920	Not Available	767	Open in IMG/M
3300016270\|Ga0182036_11060571	Not Available	670	Open in IMG/M
3300016270\|Ga0182036_11885894	Not Available	507	Open in IMG/M
3300016319\|Ga0182033_11835167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300016357\|Ga0182032_11259827	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300016371\|Ga0182034_10699778	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300016387\|Ga0182040_10637406	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300016422\|Ga0182039_10621596	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300017928\|Ga0187806_1185490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300017942\|Ga0187808_10295609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300017975\|Ga0187782_10697998	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300018431\|Ga0066655_11029734	Not Available	571	Open in IMG/M
3300020070\|Ga0206356_10729277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300021180\|Ga0210396_11419118	Not Available	573	Open in IMG/M
3300021401\|Ga0210393_10381881	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300021403\|Ga0210397_10488005	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300021560\|Ga0126371_11572656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300021860\|Ga0213851_1875637	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300025922\|Ga0207646_11793721	Not Available	525	Open in IMG/M
3300025928\|Ga0207700_10622290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	961	Open in IMG/M
3300027505\|Ga0209218_1084760	Not Available	658	Open in IMG/M
3300027725\|Ga0209178_1319625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300027727\|Ga0209328_10265108	Not Available	511	Open in IMG/M
3300028906\|Ga0308309_10801945	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300028906\|Ga0308309_11022760	Not Available	715	Open in IMG/M
3300031543\|Ga0318516_10491609	Not Available	704	Open in IMG/M
3300031544\|Ga0318534_10398141	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031549\|Ga0318571_10103133	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300031549\|Ga0318571_10187110	Not Available	734	Open in IMG/M
3300031549\|Ga0318571_10368445	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300031573\|Ga0310915_11118984	Not Available	547	Open in IMG/M
3300031668\|Ga0318542_10243485	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300031680\|Ga0318574_10551653	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031682\|Ga0318560_10286230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300031719\|Ga0306917_11335056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300031736\|Ga0318501_10002573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5801	Open in IMG/M
3300031751\|Ga0318494_10621590	Not Available	632	Open in IMG/M
3300031764\|Ga0318535_10490000	Not Available	546	Open in IMG/M
3300031765\|Ga0318554_10154406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300031765\|Ga0318554_10783126	Not Available	533	Open in IMG/M
3300031765\|Ga0318554_10824319	Not Available	518	Open in IMG/M
3300031777\|Ga0318543_10282367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300031778\|Ga0318498_10005125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4955	Open in IMG/M
3300031778\|Ga0318498_10177198	Not Available	969	Open in IMG/M
3300031780\|Ga0318508_1081260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300031781\|Ga0318547_10484406	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031781\|Ga0318547_10494576	All Organisms → cellular organisms → Bacteria → Terrabacteria group	755	Open in IMG/M
3300031794\|Ga0318503_10028358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300031795\|Ga0318557_10161339	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031797\|Ga0318550_10411809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	654	Open in IMG/M
3300031821\|Ga0318567_10102819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1548	Open in IMG/M
3300031821\|Ga0318567_10733657	Not Available	560	Open in IMG/M
3300031845\|Ga0318511_10161209	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300031845\|Ga0318511_10482482	Not Available	573	Open in IMG/M
3300031846\|Ga0318512_10056160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1769	Open in IMG/M
3300031890\|Ga0306925_10858286	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300031890\|Ga0306925_11532704	Not Available	651	Open in IMG/M
3300031893\|Ga0318536_10362248	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031897\|Ga0318520_10055399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2101	Open in IMG/M
3300031897\|Ga0318520_10369220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	873	Open in IMG/M
3300031912\|Ga0306921_12691180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	511	Open in IMG/M
3300031941\|Ga0310912_10510596	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300032001\|Ga0306922_11062773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300032008\|Ga0318562_10315027	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300032010\|Ga0318569_10019279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2722	Open in IMG/M
3300032025\|Ga0318507_10053456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300032039\|Ga0318559_10582177	Not Available	522	Open in IMG/M
3300032041\|Ga0318549_10285630	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300032052\|Ga0318506_10047221	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300032060\|Ga0318505_10315957	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300032068\|Ga0318553_10583743	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300032160\|Ga0311301_11252291	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300032261\|Ga0306920_101506897	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300032896\|Ga0335075_10701255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	973	Open in IMG/M
3300033289\|Ga0310914_11564384	Not Available	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.64%
Aquatic	Environmental → Aquatic	3.64%
Plants	Host-Associated → Plants	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.64%
Freshwater	Environmental → Aquatic → Freshwater	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Sediment	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.36%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001632	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20235J16296_10011491	3300001632	Forest Soil	MSTSSIAQVTTGGRQRTTRRSDRRAIALAIVLGAQL
Ga0066398_101475942	3300004268	Tropical Forest Soil	MSTSSIARITTEGGQGGARRLDRRGIALAIVLGAQLMIILDMTVVNIAL
Ga0070714_1023785352	3300005435	Agricultural Soil	MSTSSIAESVHRRSSGPARLRDRRGLALALVLGAQLMIILDMTVVNIALPSIA
Ga0070701_110661491	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIATTRGAPPAARSSGRDRAVALALVLGAQLMIILDMTVVNVALPS
Ga0070708_1005953031	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALPSI
Ga0070706_1008835181	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSVMQETRLRPSRRTALRDRRGLALAIVLGAQLMIILDMTVVNI
Ga0070763_107953491	3300005610	Soil	MSTSSIAQVTIGGRQRTTRRPDRRAIALAIVLGAQLMIILDMTVVNIALPSIA
Ga0068856_1025317901	3300005614	Corn Rhizosphere	MSNSSIATTRGAPPAAPRPGGRDRAVALALVLGAQLMIILDMTVVNVAL
Ga0066903_1017786771	3300005764	Tropical Forest Soil	MSTSSIAESIQRRSGAARFRDRRGLALALVLGAQLMIILDMTVVNIALPSI
Ga0070717_102004723	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIAQITAEGLRRTARQRERRGIALALVLGAQLMII
Ga0070717_103844721	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIAESIQRRSGATRFRDRRGLALALVLGAQLMIILDMTVVNI
Ga0075017_1010490781	3300006059	Watersheds	MPTSSIMQQASQRPGRRTALRDRRGLALAIVLGAQLMIILDMTVVNI
Ga0070765_1010061132	3300006176	Soil	MSTSSITPVATRGRTRATGRPDRRGIALALVLGAQLMIILDMTV
Ga0075434_1016014472	3300006871	Populus Rhizosphere	MSTSSIMQETRLRPRRRTALRDRRGLALAIVLGAQLMIILDVTVVNIALP
Ga0066709_1033136642	3300009137	Grasslands Soil	MSTSSVMQETRLRPRRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALPSIA
Ga0114129_107706573	3300009147	Populus Rhizosphere	MSTSSIMQQTPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVNI
Ga0126374_112952372	3300009792	Tropical Forest Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALP
Ga0126374_118536471	3300009792	Tropical Forest Soil	MSTSSIMQETRLRPRRRTALRDRRGLALAIVLGAQLMIILDMTVVNIALP
Ga0126380_119634822	3300010043	Tropical Forest Soil	MSTSSVMQETRLRPRRRTALRDRRGLALAIVLGAQLMIILD
Ga0126373_123530101	3300010048	Tropical Forest Soil	MSTSSIAESIQRRSGATRFRDRRGLALALVLGAQLMIILDMTVVNIALPSI
Ga0126373_123804231	3300010048	Tropical Forest Soil	MSTSSIMQETPLRPGRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALPS
Ga0126373_129744291	3300010048	Tropical Forest Soil	MSTSSIMQETALRSGRLAALRDRRGLALAIVLGAQLMIILDMTV
Ga0126376_124034152	3300010359	Tropical Forest Soil	MSTSSIMQETALRSGRLAALRDRRGLALAIVLGAQLMI
Ga0126372_102543151	3300010360	Tropical Forest Soil	MSTSSIARITRDGRQGGARRLDRRGIALALVLGAQLMIILD
Ga0126372_117453041	3300010360	Tropical Forest Soil	MSTSSIAESIQRRSGAARFRDRRGLALALVLGAQLMIILDMTVVNIALPSIARG
Ga0126378_113734062	3300010361	Tropical Forest Soil	MSTSSLTERAGEGNGRVTRLRNRRGLALALVLGAQLMIILDMTVVNIAL
Ga0126378_117164781	3300010361	Tropical Forest Soil	MSTSSIRQETPPRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVN
Ga0126378_122524122	3300010361	Tropical Forest Soil	MSTSSIAESIQRRSGAARFRDRRGLALALVLGAQLMIILDMTVVNIALPSIA
Ga0136449_1002681771	3300010379	Peatlands Soil	MSTSSIAQIMTEGRQRTVRRGDRRGIALALVLGAQLMIILDMTVVNIALPSIA
Ga0126383_115328351	3300010398	Tropical Forest Soil	MSTSSIMQQTPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVV
Ga0134127_101630911	3300010399	Terrestrial Soil	MSTSSIATIRSGPPAAPRSSGRDRAVALALVLGAQLMIILDMTVVNVALP
Ga0137378_105521641	3300012210	Vadose Zone Soil	MSTSSIMQETSQRLGRRTALRDRRGLALAIVLGAQLMIILDMT
Ga0137378_111463871	3300012210	Vadose Zone Soil	MSTTSITQVTREGRVTRRPDRRGIALALVLGAQLMIILDMTVVNIALPSIARG
Ga0164301_115967251	3300012960	Soil	MSTSSIMQETRLRPRRRTALRDRRGLALAIVLGAQL
Ga0126369_105934201	3300012971	Tropical Forest Soil	MSTSSIMQETPRRSGRRTALRDRRGMALAIVLGAQLMIILDMTVVNIALPSIA
Ga0126369_114869202	3300012971	Tropical Forest Soil	MSTSSIAQVTTAGRRRTARRPDHRGIALALVLGAQLMIILD
Ga0182036_110605712	3300016270	Soil	MSTSSIAESILDRSGGASRFRDRRGLALALVLGAQLMIILDMTVVNIALP
Ga0182036_118858941	3300016270	Soil	MSTSSIMQETRQLSSRRAALRDRRGLALAIVLGAQLMIILDLTVVNIALPS
Ga0182033_118351671	3300016319	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMI
Ga0182032_112598272	3300016357	Soil	MSTSSIMQETRQLSSRRAALRDRRGLALAIVLGAQLMIIL
Ga0182034_106997782	3300016371	Soil	MSTSSIMQETPPRSSRRAALRDRRGLALAIVLGAQLMIVL
Ga0182040_106374062	3300016387	Soil	MSTSSIMQETLLRSGRRAALRDRRGLALAIVLGAQVMIVLGLPVVNIALPS
Ga0182039_106215961	3300016422	Soil	MPASSIMQETRQLPGRRAALRDRRALALAIVLGAQLMIILDMTVVN
Ga0187806_11854901	3300017928	Freshwater Sediment	MSTSSITESILGRRGAPRLRDRRGLALALVLGAQLMIILDMTV
Ga0187808_102956091	3300017942	Freshwater Sediment	MSTSSITESILGRRGAPRLRDRRGLALALVLGAQLMIILDMTVVNIALPSIA
Ga0187782_106979982	3300017975	Tropical Peatland	MSTSSTAQVTTAGRERTARGPDRRGIALALVLGAQLMIILD
Ga0066655_110297341	3300018431	Grasslands Soil	MSTSSIMQETSQRLGRRTALRDRRGLALAIVLGAQLMIILDMTVVNIA
Ga0206356_107292772	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIATTRGAQPAARSSGRDRAVALALVLGAQLMIILDMTVVNVAL
Ga0210396_114191181	3300021180	Soil	MSTSSIMQETIRRPSRLAAVRDRRGLALAIVLGAQLMI
Ga0210393_103818813	3300021401	Soil	MSTSSIMQETIRRPSRLAAVRDRRGLALAIVLGAQLMIILDMTVVNIALP
Ga0210397_104880051	3300021403	Soil	MSTSSIAQVTTGSRERTSRRPDRRAIALAIVLGAQ
Ga0126371_115726562	3300021560	Tropical Forest Soil	MSTSSIAESIQRRSGAARLRDRRGLALALVLGAQLMIILDMTVVNIALPSIAR
Ga0213851_18756372	3300021860	Watersheds	MSTSSIMQETSRRPGRRTALRDRRGLALAIVLGAQLMIILDMTVVNI
Ga0207646_117937211	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILD
Ga0207700_106222902	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSTTSITQVTRESRTTRRPDRRGIALALVLGAQLMIILDMT
Ga0209218_10847602	3300027505	Forest Soil	MSTSSIAQVRARVRQRTARGPDRRGVALALVLGAQLMIILDLTVVNIALPSIAQ
Ga0209178_13196252	3300027725	Agricultural Soil	MSTSSVMQETRLRPRRRTALRDRRGLALAIVLGAQLMI
Ga0209328_102651082	3300027727	Forest Soil	MSTSSISPIMTMAGRQRTGRRPDRRGIALALVLGAQLMIILDMTVVNV
Ga0308309_108019451	3300028906	Soil	MSTSSITPVATRGRTRATGRPDRRGIALALVLGAQLMIILDMTVVNIALPSIAR
Ga0308309_110227602	3300028906	Soil	MSTSSIAQVTTDGRERTSRRPDRRAIALAIVLGAQLMIILDMTVV
Ga0318516_104916091	3300031543	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLM
Ga0318534_103981412	3300031544	Soil	MSTSSVMQETRLRPSRRTALRDRRGLALAIVLGAQLMIILDMTVVNIALPS
Ga0318571_101031332	3300031549	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDLTVVNIAL
Ga0318571_101871101	3300031549	Soil	MSTSSIAESIQRRSGATRFRDRRGLALALVLGAQLMIILDMTVVNIALPS
Ga0318571_103684452	3300031549	Soil	MSTSSIMQETRQLPGRRAALRDRRALALAIVLGAQL
Ga0310915_111189842	3300031573	Soil	MSTSSIMQETRQLPGRRAALRDRRALALAIVLGAQLMIILD
Ga0318542_102434851	3300031668	Soil	MSTSSIAESIQRRSGASRFRDRRGLALALVLGAQLM
Ga0318574_105516532	3300031680	Soil	MSTSSIMQETRQLPGRRAALRDRRALALAIVLGAQLMIILDKT
Ga0318560_102862302	3300031682	Soil	MSTSSIAQVTTAGRQRTARRPDRRGIALALVLGAQLMIILDMTVVNIAL
Ga0306917_113350562	3300031719	Soil	MSTSSVMQETRLRPSRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALPSIAR
Ga0318501_100025738	3300031736	Soil	MSTSSIMQEIPPRSVRRAALRDRRGLALAIVLGAQLMIILDLTVVN
Ga0318494_106215901	3300031751	Soil	MSTSSIARITTEGGRGGARRLDRRGIALAIVLGAQLMIILD
Ga0318535_104900002	3300031764	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVV
Ga0318554_101544063	3300031765	Soil	MSTSSITESILGRSSGASRLRDRRGLALALVLGAQLMIILDMTVVNIA
Ga0318554_107831262	3300031765	Soil	MSTSSIMQETLLRSGRRAALRDRRGLALAIVLGAQLMIVLDL
Ga0318554_108243192	3300031765	Soil	MSTSSVMQETRLRPSRRTALRDRRGLALAIVLGAQLMIILDMTVV
Ga0318543_102823672	3300031777	Soil	MSTSSIAQVTTAGRQRTARRPDRRGIALALVLGAQLMIILDMT
Ga0318498_100051256	3300031778	Soil	MSTSSIAESIQRRSGATRFRDRRGLALALVLGAQLMIILDLTW
Ga0318498_101771982	3300031778	Soil	MSTSSIAESVLGRSSGAGRLRDRRGLALALVLGAQLMIILDMTVVN
Ga0318508_10812602	3300031780	Soil	MSTSSIAESILDRSGGASRFRDRRGLALALVLGAQLMIILDMTVVNIALPS
Ga0318547_104844061	3300031781	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVNIA
Ga0318547_104945761	3300031781	Soil	MPASSIMQETRQLPGRRAALRDRRGVALAIVLGAQLMIILDMTVVNI
Ga0318503_100283583	3300031794	Soil	MSTSSIAESILDRSGGASRFRDRRGLALALVLGAQLMIILDMTVVNIALPSIARG
Ga0318557_101613391	3300031795	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVNIALPS
Ga0318550_104118091	3300031797	Soil	MSTSSIAESILERSSGASRFRDRRGLALALVLGAQLM
Ga0318567_101028191	3300031821	Soil	MSTSSIMQETRQLSSRRAALRDRRGLALAIVLGAQLMI
Ga0318567_107336571	3300031821	Soil	MSTSSIAQVMTAARQRTERGRDRRGIALALVLGAQLMIILD
Ga0318511_101612092	3300031845	Soil	MSTSSIAESILDRSGGASRFRDRRGLALALVLGAQLMIILDMTV
Ga0318511_104824822	3300031845	Soil	MSTSSIAQITRDGLQRTARRWPDRRGIALALVLGAQLMIILDMTVVNVALPSIA
Ga0318512_100561601	3300031846	Soil	MSTSSIMQETPLRSGRRAAPRDRRGLALAIVLGAQLMIILDLT
Ga0306925_108582861	3300031890	Soil	MSTSSIAQVMTAARQRTARGRDRRGIALALVLGAQLMIILDLT
Ga0306925_115327041	3300031890	Soil	MSTSSIAQIATAGRRRTARRPDRRGIALALVLGAQLMIILDMTVVNIALPSI
Ga0318536_103622481	3300031893	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQL
Ga0318520_100553991	3300031897	Soil	MSTSSIMQEIPPRSVRRAALRDRRGLALAIVLGAQLMIILDLTVVNIALP
Ga0318520_103692202	3300031897	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQLMIILDMTVVN
Ga0306921_126911801	3300031912	Soil	MSTSSIMQETPLRSGRRAALRDRRGLALAIVLGAQ
Ga0310912_105105961	3300031941	Soil	MSTSSVMQETRLRPRRTALRDRRGLALAIVLGAQLMIILDLTV
Ga0306922_110627731	3300032001	Soil	MSTSSIAQIATAGRRRTARRPDRRGIALALVLGAQLMIILDMTVVNIALPSIARG
Ga0318562_103150272	3300032008	Soil	MSTSSIMQEIPPRSVRRAALRDRRGLALAIVLGAQLMIILDLTVVNIALPS
Ga0318569_100192791	3300032010	Soil	MSTSSIAQVTTAGRQRTARRPDRRGIALALVLGAQLMIILDMTVVNIALP
Ga0318507_100534563	3300032025	Soil	MSTSSIAQVTTAGRQRTARRPDRRGIALALVLGAQLMIILDMTVVN
Ga0318559_105821772	3300032039	Soil	MSTSSIMQETRQLSSRRAALRDRRGLALAIVLGAQLMIILDLTVVN
Ga0318549_102856302	3300032041	Soil	MSTSSIMQETPLRSGRRAAPRDRRGLALAIVLGAQLMIILDLTVVNIAL
Ga0318506_100472211	3300032052	Soil	MSTSSIAQIATAGRRRTARRPDRRGIALALVLGAQLMIILDMTVV
Ga0318505_103159572	3300032060	Soil	MSTSSVMQETRLRPRRTALRDRRGLALAIVLGAQLMIILDLTVVNIALP
Ga0318553_105837432	3300032068	Soil	MSTSSIMQQTPLRSGRRAALRDRRGLALAIVLGAQLMIILDMT
Ga0311301_112522912	3300032160	Peatlands Soil	MSTSSIMQETIRRPGRLAAARDHRGLALAIVLGAQLMII
Ga0306920_1015068971	3300032261	Soil	MSTSSIMQETRQLSGRRAALRDRRGLALAIVLGAQLMIILDLTVVN
Ga0335075_107012552	3300032896	Soil	MSTSSIAQVTTGSRERTSRRPDRRAIALAIVLGAQLMIILDMTVVNIALPSIA
Ga0310914_115643842	3300033289	Soil	MSTSSIAESIQRRSGAARFRDRRGLALALVLGAQLMIILDMTVVNIAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087491

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences