Metagenome / Metatranscriptome Family F087509

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087509
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	56 residues
Representative Sequence	MKNEQSSVTFRVPDFVDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Number of Associated Samples	70
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.82 %
% of genes near scaffold ends (potentially truncated)	20.91 %
% of genes from short scaffolds (< 2000 bps)	71.82 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.364 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.455 % of family members)
Environment Ontology (ENVO)	Unclassified (39.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.63% β-sheet: 24.39% Coil/Unstructured: 60.98%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00294	PfkB	2.73
PF00069	Pkinase	2.73
PF12704	MacB_PCD	2.73
PF09250	Prim-Pol	2.73
PF00989	PAS	1.82
PF00313	CSD	1.82
PF10282	Lactonase	1.82
PF13481	AAA_25	0.91
PF00072	Response_reg	0.91
PF13426	PAS_9	0.91
PF04075	F420H2_quin_red	0.91
PF09509	Hypoth_Ymh	0.91
PF12651	RHH_3	0.91
PF01402	RHH_1	0.91
PF00486	Trans_reg_C	0.91
PF02371	Transposase_20	0.91
PF00589	Phage_integrase	0.91
PF08031	BBE	0.91
PF03372	Exo_endo_phos	0.91
PF06348	DUF1059	0.91
PF07589	PEP-CTERM	0.91
PF13229	Beta_helix	0.91
PF07676	PD40	0.91
PF02517	Rce1-like	0.91
PF13683	rve_3	0.91
PF12840	HTH_20	0.91
PF12697	Abhydrolase_6	0.91
PF04028	DUF374	0.91
PF02899	Phage_int_SAM_1	0.91
PF00326	Peptidase_S9	0.91
PF07862	Nif11	0.91
PF07366	SnoaL	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	10.91
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.91
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG2121	Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamily	Function unknown [S]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.91
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.91
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
All Organisms	root	All Organisms	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
cellular organisms	root	All Organisms → cellular organisms	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.09 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.73 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.09 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.73 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.09 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.91 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.91 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.09 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.91 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.91 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.09 %
Caulobacter sp. S45	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	0.91 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.91 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101004916	Not Available	719	Open in IMG/M
3300004091\|Ga0062387_101002444	Not Available	640	Open in IMG/M
3300005434\|Ga0070709_10174538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300005435\|Ga0070714_100428711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300005533\|Ga0070734_10036195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3083	Open in IMG/M
3300005541\|Ga0070733_10768570	Not Available	647	Open in IMG/M
3300005602\|Ga0070762_10497620	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005610\|Ga0070763_10954742	Not Available	512	Open in IMG/M
3300005921\|Ga0070766_10962365	Not Available	586	Open in IMG/M
3300005944\|Ga0066788_10109551	Not Available	687	Open in IMG/M
3300005950\|Ga0066787_10037721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. S45	894	Open in IMG/M
3300005995\|Ga0066790_10218839	Not Available	813	Open in IMG/M
3300005995\|Ga0066790_10313726	Not Available	669	Open in IMG/M
3300006176\|Ga0070765_100290498	Not Available	1509	Open in IMG/M
3300006176\|Ga0070765_100950337	Not Available	812	Open in IMG/M
3300006176\|Ga0070765_101002714	Not Available	789	Open in IMG/M
3300006176\|Ga0070765_101130195	Not Available	740	Open in IMG/M
3300006176\|Ga0070765_101139504	Not Available	737	Open in IMG/M
3300006176\|Ga0070765_101769697	Not Available	580	Open in IMG/M
3300006893\|Ga0073928_10023966	All Organisms → cellular organisms → Bacteria	6124	Open in IMG/M
3300006893\|Ga0073928_10082424	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300012582\|Ga0137358_10042331	Not Available	3019	Open in IMG/M
3300012929\|Ga0137404_10524152	Not Available	1059	Open in IMG/M
3300012929\|Ga0137404_11648722	Not Available	595	Open in IMG/M
3300012930\|Ga0137407_11574248	Not Available	626	Open in IMG/M
3300014489\|Ga0182018_10000548	All Organisms → cellular organisms → Bacteria	47995	Open in IMG/M
3300014489\|Ga0182018_10066377	Not Available	2166	Open in IMG/M
3300014495\|Ga0182015_10063310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2652	Open in IMG/M
3300014495\|Ga0182015_10081407	Not Available	2275	Open in IMG/M
3300014501\|Ga0182024_10015867	All Organisms → cellular organisms → Bacteria → Acidobacteria	14359	Open in IMG/M
3300014501\|Ga0182024_10067933	All Organisms → cellular organisms → Bacteria	5426	Open in IMG/M
3300014501\|Ga0182024_10103332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4140	Open in IMG/M
3300015242\|Ga0137412_10853794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300018038\|Ga0187855_10004436	All Organisms → cellular organisms → Bacteria → Acidobacteria	10106	Open in IMG/M
3300018057\|Ga0187858_10637554	Not Available	640	Open in IMG/M
3300020579\|Ga0210407_10483129	Not Available	968	Open in IMG/M
3300020580\|Ga0210403_10430949	All Organisms → cellular organisms → Bacteria → Acidobacteria	1075	Open in IMG/M
3300020581\|Ga0210399_10332037	Not Available	1269	Open in IMG/M
3300020583\|Ga0210401_10000974	All Organisms → cellular organisms → Bacteria	34447	Open in IMG/M
3300020583\|Ga0210401_10001423	All Organisms → cellular organisms → Bacteria → Acidobacteria	27828	Open in IMG/M
3300020583\|Ga0210401_10002851	All Organisms → cellular organisms → Bacteria	18811	Open in IMG/M
3300020583\|Ga0210401_10004820	All Organisms → cellular organisms → Bacteria → Acidobacteria	13990	Open in IMG/M
3300020583\|Ga0210401_10028473	All Organisms → cellular organisms → Bacteria	5326	Open in IMG/M
3300020583\|Ga0210401_10251571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M
3300020583\|Ga0210401_10267710	Not Available	1568	Open in IMG/M
3300020583\|Ga0210401_10987377	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300021088\|Ga0210404_10605664	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300021168\|Ga0210406_10520775	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300021171\|Ga0210405_10055323	All Organisms → cellular organisms → Bacteria	3136	Open in IMG/M
3300021171\|Ga0210405_10057678	All Organisms → cellular organisms → Bacteria → Acidobacteria	3067	Open in IMG/M
3300021171\|Ga0210405_10148255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1857	Open in IMG/M
3300021180\|Ga0210396_10099096	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300021180\|Ga0210396_10434654	Not Available	1152	Open in IMG/M
3300021180\|Ga0210396_11401023	Not Available	578	Open in IMG/M
3300021181\|Ga0210388_10678744	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300021402\|Ga0210385_10315414	Not Available	1161	Open in IMG/M
3300021402\|Ga0210385_11256901	Not Available	568	Open in IMG/M
3300021402\|Ga0210385_11559973	Not Available	504	Open in IMG/M
3300021403\|Ga0210397_10870400	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300021403\|Ga0210397_11056489	Not Available	631	Open in IMG/M
3300021405\|Ga0210387_10014334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6127	Open in IMG/M
3300021406\|Ga0210386_10341842	Not Available	1286	Open in IMG/M
3300021406\|Ga0210386_10614407	Not Available	939	Open in IMG/M
3300021407\|Ga0210383_10021563	All Organisms → cellular organisms → Bacteria → Acidobacteria	5422	Open in IMG/M
3300021407\|Ga0210383_10450714	Not Available	1111	Open in IMG/M
3300021407\|Ga0210383_11437438	Not Available	572	Open in IMG/M
3300021420\|Ga0210394_10831039	Not Available	806	Open in IMG/M
3300021420\|Ga0210394_11700037	Not Available	528	Open in IMG/M
3300021432\|Ga0210384_10519109	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300021432\|Ga0210384_11263591	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300021474\|Ga0210390_10866631	Not Available	744	Open in IMG/M
3300021477\|Ga0210398_10037101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4053	Open in IMG/M
3300021559\|Ga0210409_10023703	All Organisms → cellular organisms → Bacteria → Acidobacteria	5941	Open in IMG/M
3300022557\|Ga0212123_10014518	All Organisms → cellular organisms → Bacteria	10012	Open in IMG/M
3300022557\|Ga0212123_10082290	All Organisms → cellular organisms → Bacteria → Acidobacteria	2711	Open in IMG/M
3300023250\|Ga0224544_1057002	Not Available	563	Open in IMG/M
3300025929\|Ga0207664_10379434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300026281\|Ga0209863_10060995	Not Available	1117	Open in IMG/M
3300026291\|Ga0209890_10222669	Not Available	597	Open in IMG/M
3300026294\|Ga0209839_10137686	Not Available	813	Open in IMG/M
3300026557\|Ga0179587_10636779	Not Available	702	Open in IMG/M
3300027070\|Ga0208365_1055986	Not Available	530	Open in IMG/M
3300027334\|Ga0209529_1011193	Not Available	1485	Open in IMG/M
3300027370\|Ga0209010_1008363	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300027610\|Ga0209528_1085770	Not Available	697	Open in IMG/M
3300027795\|Ga0209139_10147019	Not Available	833	Open in IMG/M
3300027826\|Ga0209060_10102241	Not Available	1341	Open in IMG/M
3300027855\|Ga0209693_10316951	Not Available	759	Open in IMG/M
3300027855\|Ga0209693_10317476	Not Available	758	Open in IMG/M
3300027855\|Ga0209693_10409023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027867\|Ga0209167_10652555	Not Available	576	Open in IMG/M
3300027879\|Ga0209169_10713968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	519	Open in IMG/M
3300027889\|Ga0209380_10119235	Not Available	1533	Open in IMG/M
3300027895\|Ga0209624_10074479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2194	Open in IMG/M
3300027908\|Ga0209006_10106802	Not Available	2479	Open in IMG/M
3300027908\|Ga0209006_10210492	Not Available	1685	Open in IMG/M
3300027986\|Ga0209168_10423019	Not Available	647	Open in IMG/M
3300028906\|Ga0308309_10101889	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300028906\|Ga0308309_10259703	Not Available	1456	Open in IMG/M
3300028906\|Ga0308309_11440780	Not Available	590	Open in IMG/M
3300030935\|Ga0075401_11607658	Not Available	522	Open in IMG/M
3300031057\|Ga0170834_112762794	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1501	Open in IMG/M
3300031231\|Ga0170824_111098068	All Organisms → cellular organisms → Bacteria → Acidobacteria	3754	Open in IMG/M
3300031715\|Ga0307476_10089225	Not Available	2162	Open in IMG/M
3300031718\|Ga0307474_10122501	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300031718\|Ga0307474_10693151	Not Available	804	Open in IMG/M
3300031718\|Ga0307474_11257912	Not Available	585	Open in IMG/M
3300031718\|Ga0307474_11542390	Not Available	522	Open in IMG/M
3300031754\|Ga0307475_10445804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1040	Open in IMG/M
3300031962\|Ga0307479_10888185	Not Available	864	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.73%
Aquatic	Environmental → Aquatic	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.82%
Freshwater	Environmental → Aquatic → Freshwater	3.64%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.64%
Peat	Environmental → Terrestrial → Peat	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.64%
Loam	Environmental → Terrestrial → Soil → Loam	25.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.64%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.64%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.82%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1010049161	3300002245	Forest Soil	MKNEMQSSVVFRVPDFIDADGIAYTDIEIFVEMDGDIRDTAKLAQTLERPIGERGRK*
Ga0062387_1010024442	3300004091	Bog Forest Soil	MSREQTSSVVFRVPDFVDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPSTERK*
Ga0070709_101745382	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRKNEEPQESSVSLRVPNFIGEDGVEYTDNEVIVEMDCDIRNAVQLVTSLERHLTERK*
Ga0070714_1004287111	3300005435	Agricultural Soil	NSARWVGGAMSRKNEEPQESSVSLRVPNFIGEDGVEYTDNEVIVEMDCDIRNAVQLVTSLERHLTERK*
Ga0070734_100361953	3300005533	Surface Soil	MSRKNEEPKATSIVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDATKLADSLQQPSIT*
Ga0070733_107685702	3300005541	Surface Soil	MSRKNEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAAKLAGFVAAAIG*
Ga0070762_104976202	3300005602	Soil	MKNEQSSVTFRVPDFIDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK*
Ga0070763_109547421	3300005610	Soil	MKNDTSSVVFRVPDFTDADGIEYSDIEVIVEMDGDIRDTVQLAKALERPLTESK*
Ga0070766_109623651	3300005921	Soil	MKNETSSIAFNVPDFVDADGIEYTEIQVIVKMDGDIRETVNVAKTLERPIGETERR*
Ga0066788_101095512	3300005944	Soil	MSSEPTSSVIFRMPDFTDSDGIEYTEIEVVVEMDGDICETAQLVRTLERPSTERRVKP*
Ga0066787_100377212	3300005950	Soil	MSSEPTSSVIFRMPDFTDSDGIEYTEIEVVVEMDGDIRETAQLVRTLERPSTERRVKP*
Ga0066790_102188391	3300005995	Soil	HRRNSARWAGGAMNDQSSVVFSVPDFVDADGIAYTDIEVIVEMNSDIRDTVQLVKTLERPLTERK*
Ga0066790_103137262	3300005995	Soil	MKNEQTSVVFRVPEFVDSDGIQYFDIEVVVEMDSDIRDTIQLVKTLERPIGERGCK*
Ga0070765_1002904982	3300006176	Soil	MKNEMQSSVVFSAPDFVDDDGIKYTDIQVVVEMDGDIRETAQLVKTLERLLTERK*
Ga0070765_1009503372	3300006176	Soil	MSRKKEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAANLADSLQRPVKNLERK*
Ga0070765_1010027142	3300006176	Soil	MSRKNEEPQGTSSVCFRVPDFIGEDGVEYTDIEVIVEMDGDIRDAVQLVKTLERPLIGANE*
Ga0070765_1011301952	3300006176	Soil	MKNEQCSVVFRVPDFVDSDGIAYTDIEVVVEMDSDIRSTTKIAQTLERLVERGRNE*
Ga0070765_1011395043	3300006176	Soil	MSSEQTSSVTFRVPDFVGDDGVTYSDIEVIVEMGGDIRDTVQLVKTLEHPLTERK*
Ga0070765_1017696971	3300006176	Soil	MKNEQSSVTFRVPDFIDSDGIEYTEVEVIVQMDSDIRDAANLAKTLERIGER
Ga0073928_100239662	3300006893	Iron-Sulfur Acid Spring	MKNDTSSVVFRVPDFIDADGIAYTDIEIVVEMDGDIRETVQLVKTLERPLTERK*
Ga0073928_100824242	3300006893	Iron-Sulfur Acid Spring	MKNDTSSIVFRVPDFVDADGIEYTEIEVVVEMDGDIRDTVQLVKTLERPLTERK*
Ga0137358_100423312	3300012582	Vadose Zone Soil	MKNETSSVVFHLPDSIADGIEYTDIQVIVQMDAPTHDTANLAETLQRPLKWNANE*
Ga0137404_105241523	3300012929	Vadose Zone Soil	MKNEIVFHVPEFVDSDGIEYTDIEVIVEMDGDIRETAQLVKTLERPIGERG
Ga0137404_116487221	3300012929	Vadose Zone Soil	MKNEMQSSVVFRVPDFVDADGIAYTDIEVIVEMDGDIRDTVHLVKTLERPLTECK*
Ga0137407_115742482	3300012930	Vadose Zone Soil	MKNEQSSVVFRVPDFVDADGITYTDIEVVAEMNGDIRDTAQIVKLLERPIGERGGANE*
Ga0182018_1000054842	3300014489	Palsa	MSSEQTSSVTLRVSDFTDSDGIEYTEIEVVVEMDGADIRETSPLVKTLERPLTERK*
Ga0182018_100663775	3300014489	Palsa	VNEPQGSSVIFRVPDFVFDGIEYTEITVIVEMDSDIRSTANLVKTLERPTEGTARTRP*
Ga0182015_100633101	3300014495	Palsa	VPDFADSDGIEYTNIEVVVEMDSDIRSTAEIAQTLERPIGERGRE*
Ga0182015_100814073	3300014495	Palsa	MSGEQTASVTFQVPDFEYDGVVYSDIEVIVEMDGDIRDTVKLVKTLEQVETGISA*
Ga0182024_1001586717	3300014501	Permafrost	MKNEQSSVTFRVPDFTDSDVQYTEIEVIVEMDGDIRDTAQLVKTLERPLAKGGSQSNVHQGA*
Ga0182024_100679337	3300014501	Permafrost	MSEQTSSVTLHVPSFTDCDGIEYTNIEVVVMGGDIRETASLAKTLERPIGETECK*
Ga0182024_101033323	3300014501	Permafrost	LSKSEGTPTSAVTFTVPDFIDADGISYTDIEVIVEMDSDIRDTVQLVKTLERPLKEHK*
Ga0137412_108537942	3300015242	Vadose Zone Soil	MSRKNEQTQGTSSVCLRVPNFVGEDGVEYTDVEVVLEMDGDIRDTVNIAESLQRPLTERQ
Ga0187855_100044364	3300018038	Peatland	MSKEQTSSVVFRLPGFVDGDGVAYTDIEVIVEMNGDIRDTVQLVKTLERPLKERK
Ga0187858_106375542	3300018057	Peatland	CSWPRPGGAMSKEQTSSVVFRLPGFVDGDGVAYTDIEVIVEMNGDIRDTVQLVKTLERPLKERK
Ga0210407_104831291	3300020579	Soil	MKNEMQSSVVFHVPDFTDSDGIVYSDIEITVQMDGDIRSTANLAETLQRPVKGNANE
Ga0210403_104309492	3300020580	Soil	MKNEQSSVVFRVPDFVDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210399_103320372	3300020581	Soil	MSKEQTSSVAFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVQLVRTLERPLTERK
Ga0210401_1000097419	3300020583	Soil	MKSEQSSVTFRVPDFIDSDGIEYTDIEVIVEMDGDIRDTVHLVKTLERPLTERK
Ga0210401_100014238	3300020583	Soil	MSEQNSSVTFSVPDFVDADGIQYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210401_100028514	3300020583	Soil	MKNEQSSVTFRVPDFIDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210401_1000482010	3300020583	Soil	MSRKNEEPQGSSSATFREPDFVDADGIEYTDIQVIVQMDAPTHDTVNLAETLQRPLKGNANE
Ga0210401_100284734	3300020583	Soil	MKNEMQSSVVFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210401_102515711	3300020583	Soil	TGGSMSKEQTSSVVFRVPDFVDADGIAYTDIEVIVEMDGDIRDTVQLVKTLECPLKESK
Ga0210401_102677101	3300020583	Soil	LFGTPVTSSVVFRVPDFIDAVGIKYTDIEVIVEMDGDIRDTVQLVKSLERPLTERK
Ga0210401_109873771	3300020583	Soil	MKNEQSSVVFRVPDFTDSDRIEYTDIEVIVEMDGDIRDTVQFVKTL
Ga0210404_106056642	3300021088	Soil	TFRVPDFIDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210406_105207752	3300021168	Soil	MSRKNGEPQGTGSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAANVAESLQRFNGQNGAE
Ga0210405_100553235	3300021171	Soil	MSRKNEEPQGSSSVTFRVPDFFDADGIEYTDIEVIVEIDGDIRDTVQLVKTLERPLKERK
Ga0210405_100576783	3300021171	Soil	MSRKNEEPQGSSSVTFRVPDFVNADGIEYTDIEVIVEMDGDIRGTANLAETLQRPSG
Ga0210405_101482552	3300021171	Soil	MKSEQSSVTFRVPGFIGADGIEYTDIGVIVDMDGDIRETANLAETLQRPVRGNGNE
Ga0210396_100990964	3300021180	Soil	MKNEQSCVTFRVPDFVDADGIEYTDIEVIVQMDSSIRDTASLAERLQRPVKGNANA
Ga0210396_104346542	3300021180	Soil	MSRKNEEPQGSSSVTFRVPDFVDADGIEYTDIEVIVEMDSDIRSTANLAETLQRALKGNANE
Ga0210396_114010231	3300021180	Soil	SSVVFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLMERK
Ga0210388_106787442	3300021181	Soil	MKNEQSSVVFRVPDFVDADGVEYTDIEVIVEMDSDIRSTANLAETLQRALKGNANE
Ga0210385_103154143	3300021402	Soil	MNGKKEEPQATSSVSFRVPDFVGDDGVSYTDIEVVVEMDDDIRDAVHLIKALERPLRERK
Ga0210385_112569012	3300021402	Soil	MKNEQSSVVFRVPDFIDADGIEYTDNEVIVEMDGDMRDTVNLVKTLEPRSQMFCA
Ga0210385_115599731	3300021402	Soil	MREKNEEKQGTSSVSFHVPDFVGEDGVEYTDIEVIVEIDGDIRDAVHLVKTLERPVMERK
Ga0210397_108704001	3300021403	Soil	LSRRRHRGHSQAGVGGAMKNEQSSVTFRVPDFIDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210397_110564891	3300021403	Soil	PEARTGGAMSKEQTSSVVFRVLDFVDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210387_100143347	3300021405	Soil	MKNEQSSVVFRVPDFVDADGIEYTDIEVVVEMDGDIRDTVQVVETLQRPLA
Ga0210386_103418421	3300021406	Soil	PGGAMKSEQSSVTFRVPDFIDSDGIEYTDIEVIVEMDGDIRDTVHLVKTLERPLTERK
Ga0210386_106144071	3300021406	Soil	MSRKEEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAANLADSLRRP
Ga0210383_100215632	3300021407	Soil	MSKEQTSSVVFRVLDFVDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210383_104507142	3300021407	Soil	MSRKNKEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVGMDGDIRVAANLVESLQRPMKTKYDEDR
Ga0210383_114374381	3300021407	Soil	SAVTFRVPDFIDDDGVTYSDIEVIVEMDGDIRDTVNLVKTLERPLKRDASE
Ga0210394_108310392	3300021420	Soil	MRRKNEEPQGTSSVTFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVHLVKTLERPLTERK
Ga0210394_117000372	3300021420	Soil	MRVGGEMSEQNSSVTFSVPDFVDADGIQYTDIEVIVEMDGDIRDTVQLVKALEHPLTERK
Ga0210384_105191091	3300021432	Soil	SSVTFRVPDFIDADGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0210384_112635911	3300021432	Soil	MKNEQSSVVFRVPDFVDADGVEYTDIEVIVEMDGDIRD
Ga0210390_108666312	3300021474	Soil	MSEQNSSVTFSVPDFVDADGIQYTDIEVIVEMDGDIRDTVQLVKALEHPLTERK
Ga0210398_100371017	3300021477	Soil	MSSEQKSSVTFRVPDFVDADGIEYTDIEVVVEMEGDVRDAVQLVKTLERPLKERK
Ga0210409_100237033	3300021559	Soil	MKNEQSSVTFRVPDFIDADGIEYTDIEVIVEMDGDIRETVQLVKTLERPLTKGERNE
Ga0212123_1001451810	3300022557	Iron-Sulfur Acid Spring	MKNDTSSVVFRVPDFIDADGIAYTDIEIVVEMDGDIRETVQLVKTLERPLTERK
Ga0212123_100822902	3300022557	Iron-Sulfur Acid Spring	MKNDTSSIVFRVPDFVDADGIEYTEIEVVVEMDGDIRDTVQLVKTLERPLTERK
Ga0224544_10570021	3300023250	Soil	VNEPQGSSVIFRVPDFVFDGIEYTEITVIVEMDSDIRSTANLVKTLERPTEGTARTRP
Ga0207664_103794343	3300025929	Agricultural Soil	NSARWVGGAMSRKNEEPQESSVSLRVPNFIGEDGVEYTDNEVIVEMDCDIRNAVQLVTSLERHLTERK
Ga0209863_100609952	3300026281	Prmafrost Soil	MSSEPTSSVIFRMPDFTDSDGIEYTEIEVVVEMDGDIRETAQLVRTLERP
Ga0209890_102226692	3300026291	Soil	MSSEPTSSVIFRMPDFTDSDGIEYTEIEVVVEMDGDIRETAQLVRTLERPSTERRVKP
Ga0209839_101376863	3300026294	Soil	HRRNSARWAGGAMNDQSSVVFSVPDFVDADGIAYTDIEVIVEMNSDIRDTVQLVKTLERPLTERK
Ga0179587_106367792	3300026557	Vadose Zone Soil	MKNEIVFHVPEFVDSDGIEYTDIEVIVEMDGDIRETAQLVKTLERPIGERGCK
Ga0208365_10559862	3300027070	Forest Soil	MKNDTSSVTFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0209529_10111934	3300027334	Forest Soil	MSRKNEEAQGTSSVSFRVPDFVGEDRVEYTEIEVIVQMADIQDAAKLVDALQRPLTDRQ
Ga0209010_10083633	3300027370	Forest Soil	MSRKKEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAVQLVKALERPLTERK
Ga0209528_10857702	3300027610	Forest Soil	MKNEMQSSVVFRVPDFIDADGIAYTDIEIFVEMDGDIRDTAKLAQTLERPIGERGRK
Ga0209139_101470194	3300027795	Bog Forest Soil	MKNEQSSVTFRVPDFVDADGIEYTDIEVVVEMDGDIRDTVQLVKTLERPLTERK
Ga0209060_101022412	3300027826	Surface Soil	MSRKNEEPKATSIVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDATKLADSLQQPSIT
Ga0209693_103169511	3300027855	Soil	MSRKNDEPQRTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0209693_103174762	3300027855	Soil	MSRKNEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGEIRDAANLADSLQRPVKNLERK
Ga0209693_104090232	3300027855	Soil	MKNDTSSVVFRVPDFTDADGIEYSDIEVIVEMDGDIRDTVQLAKALERPLTESK
Ga0209167_106525551	3300027867	Surface Soil	MSRKNEEPQDSSVTFRVPDFVGEDGVEYTDIEVTVQMDGDIRDTADVAEALQRPLTERHE
Ga0209169_107139681	3300027879	Soil	MKNEQSSVTFRVPDFVDADGIEYTDIEVIVEMDGDIRDTVQLVKTLERPLTERK
Ga0209380_101192352	3300027889	Soil	MKNETSSIAFNVPDFVDADGIEYTEIQVIVKMDGDIRETVNVAKTLERPIGETERR
Ga0209624_100744795	3300027895	Forest Soil	MSRKEEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAANLADSLRRPVKNLERK
Ga0209006_101068024	3300027908	Forest Soil	MSRRKEEPQGTSSVSFRVPDFISEDGVSYTDIEVIVEMDGDIRDAANLAEALQRPLRAKNGERR
Ga0209006_102104922	3300027908	Forest Soil	MSSNNEEPKGNSSVSFRVPDFIGEDGVEYTDIEVIVEMDSDLRDTVKLVDALQRQVVGGE
Ga0209168_104230192	3300027986	Surface Soil	MSRKKEEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEMDGDIRDAANLAE
Ga0308309_101018895	3300028906	Soil	MKNEQCSVVFRVPDFVDSDGIAYTDIEVVVEMDSDIRSTTKIAQTLERLVERGRNE
Ga0308309_102597031	3300028906	Soil	MKNEMQSSVVFSAPDFVDDDGIKYTDIQVVVEMDGDIRETAQLVKTLERLLTERK
Ga0308309_114407802	3300028906	Soil	MSRKNEEPKPTSSVTFRVPDFIGEDGVEYTDIEVIVEMDGDIRDAVQLVKTLERPLIGAN
Ga0075401_116076582	3300030935	Soil	MKNERQSSAVFRVPDFVDADGIEYTDIEVIVEMDSDIHH
Ga0170834_1127627943	3300031057	Forest Soil	MSRKNEEPQDSSVSFRVPDFVGEDGVEYTDIEVVVQMDGDIRDTANLAESLQRPVRECQ
Ga0170824_1110980683	3300031231	Forest Soil	MENEQSCVTFRVPDFVDADGIEYTDIEVIVQMDSSIRDTASLAERLQRPVKGNANE
Ga0307476_100892252	3300031715	Hardwood Forest Soil	MSRKNDEPQGTSSVSFRVPDFVGEDGVEYTDIEVIVEIDGGIRYAVQLFEVLERPLTESK
Ga0307474_101225012	3300031718	Hardwood Forest Soil	MSSEQSSVTFRVPDFIDSDGIEYTDIEVIVEMDGDIRDTVQLVKRWSAH
Ga0307474_106931511	3300031718	Hardwood Forest Soil	MSRKNEEPQGSSSVTFREPDFVDADGIEYTDVEVIGDIRDTVQLVKTLERPLTERK
Ga0307474_112579122	3300031718	Hardwood Forest Soil	MKNEMQSSVVFRVPDFIDADGIEYTDIEVIVEMDGDIRDTVQLVKT
Ga0307474_115423902	3300031718	Hardwood Forest Soil	MSRKNGEPQGTTSVSFRVPDFVGEDGGEYTDIEVIVEMDGDIRDAANLAESLQGTLTE
Ga0307475_104458041	3300031754	Hardwood Forest Soil	MKNEQSCVTFRVPDFVDADGIEYNDIEVIVQMDSSIRDTASLAEKLQRPVKGNANE
Ga0307479_108881852	3300031962	Hardwood Forest Soil	MKNETSSGVFHLPDSIADGIEYTDIEVIVEMDSDTRETANLAETLQCPVKGNANE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087509

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences