Metagenome / Metatranscriptome Family F087548

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087548
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	66 residues
Representative Sequence	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAG
Number of Associated Samples	80
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.15 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	92.73 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.273 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.636 % of family members)
Environment Ontology (ENVO)	Unclassified (60.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.19% β-sheet: 0.00% Coil/Unstructured: 25.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03928	HbpS-like	4.55
PF03401	TctC	1.82
PF07439	DUF1515	0.91
PF00027	cNMP_binding	0.91
PF01139	RtcB	0.91
PF13340	DUF4096	0.91
PF01070	FMN_dh	0.91
PF04392	ABC_sub_bind	0.91
PF01068	DNA_ligase_A_M	0.91
PF08388	GIIM	0.91
PF09834	DUF2061	0.91
PF03592	Terminase_2	0.91
PF03734	YkuD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.82
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.91
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.91
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.91
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.91
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.91
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.91
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
All Organisms	root	All Organisms	32.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
cellular organisms	root	All Organisms → cellular organisms	32.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.18 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.64 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.73 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.91 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.91 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.73 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.91 %
Paraburkholderia fungorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	0.91 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002I00AP	Not Available	514	Open in IMG/M
2170459014\|G1P06HT02IJ4IP	Not Available	508	Open in IMG/M
3300000956\|JGI10216J12902_101866919	Not Available	673	Open in IMG/M
3300005165\|Ga0066869_10149671	Not Available	504	Open in IMG/M
3300005332\|Ga0066388_102341125	Not Available	967	Open in IMG/M
3300005332\|Ga0066388_104493941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300005332\|Ga0066388_104732129	Not Available	692	Open in IMG/M
3300005332\|Ga0066388_107391950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300005332\|Ga0066388_107976160	Not Available	529	Open in IMG/M
3300005363\|Ga0008090_15391332	Not Available	506	Open in IMG/M
3300005445\|Ga0070708_101993633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300005468\|Ga0070707_100573656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300005471\|Ga0070698_100601845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1039	Open in IMG/M
3300005559\|Ga0066700_10363488	Not Available	1021	Open in IMG/M
3300005713\|Ga0066905_100718234	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005764\|Ga0066903_101273260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1371	Open in IMG/M
3300005764\|Ga0066903_103172451	Not Available	889	Open in IMG/M
3300005764\|Ga0066903_105202657	Not Available	688	Open in IMG/M
3300006028\|Ga0070717_10253347	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300006175\|Ga0070712_101087750	Not Available	694	Open in IMG/M
3300006175\|Ga0070712_101300624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	633	Open in IMG/M
3300009137\|Ga0066709_101596022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	934	Open in IMG/M
3300010043\|Ga0126380_10125117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1596	Open in IMG/M
3300010043\|Ga0126380_11176162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300010047\|Ga0126382_11490549	Not Available	622	Open in IMG/M
3300010048\|Ga0126373_11030726	Not Available	889	Open in IMG/M
3300010048\|Ga0126373_11199727	Not Available	825	Open in IMG/M
3300010360\|Ga0126372_10415503	Not Available	1233	Open in IMG/M
3300010362\|Ga0126377_11181899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300010376\|Ga0126381_102791425	Not Available	697	Open in IMG/M
3300010398\|Ga0126383_11373936	Not Available	796	Open in IMG/M
3300010863\|Ga0124850_1080556	Not Available	969	Open in IMG/M
3300012206\|Ga0137380_11058333	Not Available	692	Open in IMG/M
3300012362\|Ga0137361_11124371	Not Available	707	Open in IMG/M
3300012908\|Ga0157286_10442008	Not Available	515	Open in IMG/M
3300012923\|Ga0137359_10300445	Not Available	1429	Open in IMG/M
3300012923\|Ga0137359_10681695	Not Available	897	Open in IMG/M
3300012960\|Ga0164301_11564249	Not Available	546	Open in IMG/M
3300012961\|Ga0164302_11760011	Not Available	522	Open in IMG/M
3300016294\|Ga0182041_11440781	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300016319\|Ga0182033_11780790	Not Available	559	Open in IMG/M
3300016357\|Ga0182032_10910313	Not Available	748	Open in IMG/M
3300016371\|Ga0182034_10897868	Not Available	762	Open in IMG/M
3300016387\|Ga0182040_11837231	Not Available	519	Open in IMG/M
3300016404\|Ga0182037_10038556	All Organisms → cellular organisms → Bacteria → Proteobacteria	3103	Open in IMG/M
3300016404\|Ga0182037_11692582	Not Available	564	Open in IMG/M
3300016422\|Ga0182039_10579724	Not Available	978	Open in IMG/M
3300016422\|Ga0182039_11551728	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300016422\|Ga0182039_11734523	Not Available	572	Open in IMG/M
3300021478\|Ga0210402_11925919	Not Available	517	Open in IMG/M
3300025916\|Ga0207663_10261718	Not Available	1278	Open in IMG/M
3300025922\|Ga0207646_11084873	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031561\|Ga0318528_10038923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2369	Open in IMG/M
3300031668\|Ga0318542_10479927	Not Available	645	Open in IMG/M
3300031668\|Ga0318542_10693475	Not Available	532	Open in IMG/M
3300031679\|Ga0318561_10341001	Not Available	821	Open in IMG/M
3300031679\|Ga0318561_10599583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia fungorum	606	Open in IMG/M
3300031680\|Ga0318574_10282301	Not Available	963	Open in IMG/M
3300031680\|Ga0318574_10474495	Not Available	732	Open in IMG/M
3300031682\|Ga0318560_10545035	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031724\|Ga0318500_10661461	Not Available	531	Open in IMG/M
3300031744\|Ga0306918_10341940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1159	Open in IMG/M
3300031770\|Ga0318521_10019413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3142	Open in IMG/M
3300031771\|Ga0318546_10428826	Not Available	925	Open in IMG/M
3300031771\|Ga0318546_11138849	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300031778\|Ga0318498_10190588	Not Available	931	Open in IMG/M
3300031792\|Ga0318529_10304880	Not Available	741	Open in IMG/M
3300031794\|Ga0318503_10245040	Not Available	581	Open in IMG/M
3300031795\|Ga0318557_10520241	Not Available	546	Open in IMG/M
3300031799\|Ga0318565_10067984	Not Available	1678	Open in IMG/M
3300031819\|Ga0318568_10241240	Not Available	1118	Open in IMG/M
3300031845\|Ga0318511_10147666	Not Available	1026	Open in IMG/M
3300031846\|Ga0318512_10020715	Not Available	2706	Open in IMG/M
3300031846\|Ga0318512_10668358	Not Available	531	Open in IMG/M
3300031859\|Ga0318527_10159232	Not Available	949	Open in IMG/M
3300031879\|Ga0306919_10108974	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300031879\|Ga0306919_11406017	Not Available	526	Open in IMG/M
3300031890\|Ga0306925_10674273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300031890\|Ga0306925_10976483	Not Available	865	Open in IMG/M
3300031893\|Ga0318536_10258454	Not Available	885	Open in IMG/M
3300031893\|Ga0318536_10448064	Not Available	650	Open in IMG/M
3300031894\|Ga0318522_10370618	Not Available	542	Open in IMG/M
3300031912\|Ga0306921_10159704	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300031941\|Ga0310912_11476779	Not Available	512	Open in IMG/M
3300031942\|Ga0310916_10235696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300031942\|Ga0310916_10473391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1067	Open in IMG/M
3300031946\|Ga0310910_11423693	Not Available	533	Open in IMG/M
3300031947\|Ga0310909_11265925	Not Available	594	Open in IMG/M
3300031959\|Ga0318530_10213598	Not Available	792	Open in IMG/M
3300031981\|Ga0318531_10274208	Not Available	762	Open in IMG/M
3300031981\|Ga0318531_10389754	Not Available	630	Open in IMG/M
3300032042\|Ga0318545_10218395	Not Available	683	Open in IMG/M
3300032042\|Ga0318545_10220671	Not Available	679	Open in IMG/M
3300032043\|Ga0318556_10086227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1575	Open in IMG/M
3300032044\|Ga0318558_10647051	Not Available	528	Open in IMG/M
3300032054\|Ga0318570_10293256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	739	Open in IMG/M
3300032055\|Ga0318575_10220846	Not Available	954	Open in IMG/M
3300032068\|Ga0318553_10311110	Not Available	824	Open in IMG/M
3300032076\|Ga0306924_11201443	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300032076\|Ga0306924_11963260	Not Available	604	Open in IMG/M
3300032089\|Ga0318525_10670285	Not Available	528	Open in IMG/M
3300032180\|Ga0307471_100432081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300032261\|Ga0306920_100399245	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300032261\|Ga0306920_101304179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300033289\|Ga0310914_10210231	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300033289\|Ga0310914_11513750	Not Available	574	Open in IMG/M
3300033290\|Ga0318519_10170884	Not Available	1226	Open in IMG/M
3300033290\|Ga0318519_10508079	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.09%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.09%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.73%
Loam	Environmental → Terrestrial → Soil → Loam	16.36%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_00409590	2170459003	Grass Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQARAYL
2PV_00319720	2170459014	Switchgrass, Maize And Mischanthus Litter	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPA
JGI10216J12902_1018669192	3300000956	Soil	MPKHDPPGDDAALLELERELMGLDRAIRAADENREAINYTLFDRRDELMARIFNTP
Ga0066869_101496711	3300005165	Soil	MPKHDPPNDDGALLDFERALLAVDRAIRAADENREAMNYSLFDRRDELMARIFNTPAAGLTGLAVQARAYL
Ga0066388_1023411252	3300005332	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAINYALFDRRDELMASIFNTPAAGLEGLAVQARAYLSEHEVE
Ga0066388_1044939412	3300005332	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRVADESREAINYTLFDRRDELMARIFNTPAAGLAGLAVQARAYLSEREG
Ga0066388_1047321291	3300005332	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAMDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVEFADS
Ga0066388_1073919501	3300005332	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRAADEKGEAIDYALFDRRDELTARIFNTPAAGLAGLAVQARAYLSEREVEFADSE
Ga0066388_1079761602	3300005332	Tropical Forest Soil	MPKHDPPNDDGALLDLERQLLALDRAIRAADENQEAIPYATFDRRDELMARVFDTPAAGLAGLAVQAR
Ga0008090_153913322	3300005363	Tropical Rainforest Soil	PMPKHDPPGDDAALLELERELMKLDRAIRAAEEDREAIDYALFDRRDDLMAWIFNTPAAGLAGLARAGVRILV*
Ga0070708_1019936331	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAGLAV
Ga0070707_1005736561	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDNAALLELERELMELDGAIRAADENREAIDYALFDRRDELMARIFNTPAAGLAGLAVQARAYLS
Ga0070698_1006018451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDNAALLELERELMELDGAIRAADENREAIDYALFDRRDELMARIFNTPAAGL
Ga0066700_103634884	3300005559	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGL
Ga0066905_1007182341	3300005713	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRAADENREAINYTLFDRRDELMARIFNTPAAGLAG
Ga0066903_1012732603	3300005764	Tropical Forest Soil	MPKHDPPGDDAGLLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLAVQARA
Ga0066903_1031724511	3300005764	Tropical Forest Soil	MPKHDPPGDDAALLGLERELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNT
Ga0066903_1052026571	3300005764	Tropical Forest Soil	MPKHDPSGDDAALLELEHELMELDRAIRAADENREAINYTLFDRRDELMARIFNTPAAGLAGLAVQARAYLSERESEFADSEGEEPLDF
Ga0070717_102533471	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDNAALLELERELMELDGAIRAADENREAIDYALFDRRDELMARIFNTPAAG
Ga0070712_1010877501	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDDAALLELERELMGLDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAGLAV
Ga0070712_1013006241	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPKHDPPGDDAALLELERELMELDRAIRAADENREAINYALFDRRDELMARIFNTPAAGLAGLAVQAR
Ga0066709_1015960223	3300009137	Grasslands Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDSLFDRRDELMARIFNTPAA
Ga0126380_101251171	3300010043	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDCAIRAVDENREAINYTLFDRRDELMGRIFNTPAA
Ga0126380_111761621	3300010043	Tropical Forest Soil	MPKHDPPGDDAALLELERKLMELDRAIRVADENREAINYALFDRRDELMASIFNTPAAGL
Ga0126382_114905491	3300010047	Tropical Forest Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNT
Ga0126373_110307264	3300010048	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDCAIRAVDENREAINYTLFDRRDELMGRI
Ga0126373_111997271	3300010048	Tropical Forest Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLAV
Ga0126372_104155033	3300010360	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRAADEKGEAIDYALFDRRDELMARIFNTPAAGLAGLAVQARAYLSEHEVEF
Ga0126377_111818993	3300010362	Tropical Forest Soil	MPKHDPPGDDAALLELERKLMELDRAIRVAEEKREAINYARFDRRDELMASIFNTPAAGLEGLAVQARA
Ga0126381_1027914251	3300010376	Tropical Forest Soil	MPKHDPPGDDGALLELERELMELDRAIRAADENREAINYTLFDRRDKLMARIFNTTAAGLVGLAVQARAYLSERESEFADSEGEEPLD
Ga0126383_113739361	3300010398	Tropical Forest Soil	MPKHDPPGDDAALLELERELMELDCAIRAADENREAINYTLFDRRDELMGRIFNTPAAGLAGLAVQ
Ga0124850_10805561	3300010863	Tropical Forest Soil	MPKHDPPGDDGALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLTVQARAVQARA
Ga0137380_110583331	3300012206	Vadose Zone Soil	MPKHDPPGDDAALLELERELMELDRAIRAADENREAINYTLFDRRDELMARIFNTPPAGLAGLAVQARA
Ga0137361_111243711	3300012362	Vadose Zone Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRQDELMARIFNTPAAGLAGLAVQARAYLSEHEV*
Ga0157286_104420081	3300012908	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQA
Ga0137359_103004451	3300012923	Vadose Zone Soil	MPKHDPPGDDAALLELERELMELDRAIRAADENREAINYALFDRRDELMARIFNTPAA
Ga0137359_106816951	3300012923	Vadose Zone Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAINYALFDRRDEVMARIFTTPAAGLAGLAVQAR
Ga0164301_115642492	3300012960	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAMDYARFDRRDELMAPPTRLN
Ga0164302_117600111	3300012961	Soil	MTKHDPPGDHAALLELEREVLELDRVIRVADENREVINYALFDRRDELMASIFNTPAVGLAGLAAQARAFKLERENE
Ga0182041_114407812	3300016294	Soil	MPKQDPPGAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPA
Ga0182033_117807901	3300016319	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIF
Ga0182032_109103131	3300016357	Soil	MPKHDPPGDDAALLELERELMELDRAVRAAEENREAIDYALFDRRDELMARIFTTPA
Ga0182034_108978681	3300016371	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQARAYLS
Ga0182040_118372311	3300016387	Soil	MPKQDPLGDDPALLKLERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVE
Ga0182037_100385561	3300016404	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLTVQARA
Ga0182037_116925821	3300016404	Soil	MPKQDPPGAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQAR
Ga0182039_105797241	3300016422	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGL
Ga0182039_115517281	3300016422	Soil	MPKHDPPGDDAALLELERELMKLDRAIRAAEEDREAIDYALFDRRDDLMARIFNTPAAGL
Ga0182039_117345231	3300016422	Soil	MPKHDPPGDDAALFELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQAR
Ga0210402_119259192	3300021478	Soil	MPKHDPPGDDAALLELEREVLELDRVIRVADENREVINYALFDRRDELMASIFNTPAVGLAGLAVQARAYLSEH
Ga0207663_102617182	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDDAALLELERELMEQDRAIRVADENREAIDYALFDRRDELMARISNTPAAGLAGLAVQARAYLSEHEVEFA
Ga0207646_110848731	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPKHDPPGDNAALLELERELMELDGAIRAADENREAIDYALFDRRDELMARIFNTPA
Ga0318528_100389231	3300031561	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREI
Ga0318542_104799271	3300031668	Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAGLAVQARAYLSEHEV
Ga0318542_106934751	3300031668	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQAR
Ga0318561_103410012	3300031679	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELTALAG
Ga0318561_105995831	3300031679	Soil	MPKQDPPGAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVE
Ga0318574_102823012	3300031680	Soil	MPKHDPPGDDAALLELERELIELDRAIRAADENREAINYTLFDRRDELIARIFNTPAAGLAGLAVQARAYLSERESE
Ga0318574_104744951	3300031680	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLTVQA
Ga0318560_105450351	3300031682	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLAVQAR
Ga0318500_105320132	3300031724	Soil	MPKQDPPGAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMAR
Ga0318500_106614611	3300031724	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVEFA
Ga0306918_103419401	3300031744	Soil	MPKQDPLGDDPALLKLERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAG
Ga0318521_100194131	3300031770	Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAGLAVQA
Ga0318546_104288262	3300031771	Soil	MPKHDPPGDDAALLELERELIELDRAIRAADENREAINYTLFDRRDELIARIFNTPA
Ga0318546_111388491	3300031771	Soil	MPKQDPPGDNAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAA
Ga0318498_101905881	3300031778	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMTRIFNTPAAGLAGLAVQTRAYLSEREVEFADS
Ga0318529_103048801	3300031792	Soil	MPKQDPLGDDPALLKLERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVEFVDSVG
Ga0318503_102450401	3300031794	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQ
Ga0318557_105202411	3300031795	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQARAYLSEREVEFADSEGE
Ga0318565_100679842	3300031799	Soil	MPKQDPLGDDPALLKLERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLA
Ga0318568_102412404	3300031819	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTP
Ga0318511_101476661	3300031845	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMVRMFNTPAAGLPG
Ga0318512_100207158	3300031846	Soil	MPKHDPPGDDAALLELERELIELDRAIRAADENREAINYTLFDRRDELIARIFN
Ga0318512_106683581	3300031846	Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAGLAVQARAYLSEHEVEFADSEGEE
Ga0318527_101592321	3300031859	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMVRMFNTPAAGLPGLAVQARTYLSEREVEFADSEGEG
Ga0306919_101089741	3300031879	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQA
Ga0306919_114060171	3300031879	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFDTPAAGL
Ga0306925_106742731	3300031890	Soil	MPKHDPPGDDAALFELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTP
Ga0306925_109764831	3300031890	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLS
Ga0318536_102584543	3300031893	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTT
Ga0318536_104480641	3300031893	Soil	MPKHDPPGDDAALLELERELIELDRAIRAADENREAINYTLFDRRDELIARIFNTPAAGLAGLAVQARAYLSERE
Ga0318522_103706181	3300031894	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYLSEREVEFADSQ
Ga0306921_101597044	3300031912	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARA
Ga0310912_114767792	3300031941	Soil	MPKHDPPGDDAALFELERELMELDRAIRAAEENREAIDYALFDRRDELMARI
Ga0310916_102356961	3300031942	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYL
Ga0310916_104733913	3300031942	Soil	MPKHDPPGDDAALLELEHELMELDRAIRATEENREAIDYALFDRRDDLMARIFNTPAAGLAGLAVQARAYLSEREVEFAEGE
Ga0310910_109922602	3300031946	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDL
Ga0310910_114236931	3300031946	Soil	MPKHDPPGDDAALLELERELMGLDRAIRAADENREAINYTLFDRRDELMARIFNTPAAGLAGLAVQARAYLSEHEVEFADSE
Ga0310909_112659251	3300031947	Soil	MPKQDPPGDNAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAYL
Ga0318530_102135982	3300031959	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMAR
Ga0318531_102742081	3300031981	Soil	MPKHDPPGDDAALFELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGLAGLAVQARAYLSERE
Ga0318531_103897541	3300031981	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPAAGLAGLTVQARAYLSER
Ga0318545_102183952	3300032042	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFNTPA
Ga0318545_102206711	3300032042	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMTRIFNT
Ga0318556_100862271	3300032043	Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPAAGLAG
Ga0318558_106470511	3300032044	Soil	MPKHDPPGDDAALLELERELIELDRAIRAADENREAINYTLFDRRDELIARIF
Ga0318570_102932561	3300032054	Soil	MPKQDPPGDNAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAG
Ga0318575_102208461	3300032055	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAG
Ga0318553_103111101	3300032068	Soil	MPKHDPPGDDAALLELEHELMELDRAIRPAEENREAIDYALFDRRDDLMARILNTPAAGLAGLTVQARAY
Ga0306924_112014431	3300032076	Soil	MPKHDPPGDDAALLELEHELMELDRAIRAAEENREAIDYALFDRRDDLMARIFNTPA
Ga0306924_119632601	3300032076	Soil	MPKQDPPGDNAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGLAGLAVQARAY
Ga0318525_106702851	3300032089	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMVRMFNTPAAGLPGLAVQARTYLSEREVEFADSE
Ga0307471_1004320814	3300032180	Hardwood Forest Soil	MPKHDPPGDDAALLELERELMELDRAIRVADENREAIDYALFDRRDELMARIFNTPA
Ga0306920_1003992454	3300032261	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPA
Ga0306920_1013041792	3300032261	Soil	MPKHDPPGDDAALFELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPATGL
Ga0310914_102102313	3300033289	Soil	MPKQDPLGDDPALLELERELMELDRAIRAGEENREAIDYALFDRRDELMARIFTTPAA
Ga0310914_115137501	3300033289	Soil	MPKQNPLGDDPALLERELMELDRAIRAAEENREAIDYALFDRRDELMARIFTTPAAGL
Ga0318519_101708843	3300033290	Soil	MPKHDPPGDDAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMVRMFNTPA
Ga0318519_105080792	3300033290	Soil	MPKQDPPGDNAALLELERELMELDRAIRAAEENREAIDYALFDRRDELMARIFT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087548

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences