Metagenome / Metatranscriptome Family F087554

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087554
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	96 residues
Representative Sequence	YNIPRDTPFDAIATSNGYSPHYDAREFQGRFSHDDQKKFDKAYEEWLEDRRKNDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.75 %
% of genes near scaffold ends (potentially truncated)	91.82 %
% of genes from short scaffolds (< 2000 bps)	89.09 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.364 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.53% β-sheet: 0.00% Coil/Unstructured: 58.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07681	DoxX	8.18
PF12728	HTH_17	4.55
PF00324	AA_permease	4.55
PF11104	PilM_2	2.73
PF12833	HTH_18	2.73
PF00072	Response_reg	1.82
PF00579	tRNA-synt_1b	1.82
PF00266	Aminotran_5	0.91
PF00111	Fer2	0.91
PF08308	PEGA	0.91
PF13377	Peripla_BP_3	0.91
PF00128	Alpha-amylase	0.91
PF03372	Exo_endo_phos	0.91
PF03147	FDX-ACB	0.91
PF00933	Glyco_hydro_3	0.91
PF01548	DEDD_Tnp_IS110	0.91
PF04350	PilO	0.91
PF12973	Cupin_7	0.91
PF01979	Amidohydro_1	0.91
PF00953	Glycos_transf_4	0.91
PF07045	DUF1330	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	8.18
COG4270	Uncharacterized membrane protein	Function unknown [S]	8.18
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	4.55
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	4.55
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	4.55
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	4.55
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.82
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.82
COG3167	Type IV pilus assembly protein PilO	Cell motility [N]	1.82
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.91
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.91
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.91
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.91
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.91
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.55 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	87.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.55 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.55 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.55 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.27 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.64 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	87.27 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.82 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01DIWME	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104596690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300000953\|JGI11615J12901_10028707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2069	Open in IMG/M
3300004157\|Ga0062590_102160049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005187\|Ga0066675_10053979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2487	Open in IMG/M
3300005289\|Ga0065704_10303326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300005355\|Ga0070671_100670801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300005436\|Ga0070713_100397041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1287	Open in IMG/M
3300005436\|Ga0070713_101663572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005437\|Ga0070710_10443000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300005437\|Ga0070710_10747518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005454\|Ga0066687_10770970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005467\|Ga0070706_101717542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005471\|Ga0070698_101781818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005518\|Ga0070699_101830528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005532\|Ga0070739_10427890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300005538\|Ga0070731_10966512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300005547\|Ga0070693_100472580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300005554\|Ga0066661_10583912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005561\|Ga0066699_10848609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300005564\|Ga0070664_101049006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300005575\|Ga0066702_10300994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300005576\|Ga0066708_10684925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005587\|Ga0066654_10620743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005764\|Ga0066903_102623209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300005841\|Ga0068863_102276694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300006175\|Ga0070712_100645447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300006237\|Ga0097621_100096183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2485	Open in IMG/M
3300006794\|Ga0066658_10340306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006893\|Ga0073928_11238738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300006904\|Ga0075424_102165930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300009012\|Ga0066710_102678808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300009088\|Ga0099830_11179310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300009098\|Ga0105245_12456724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300009143\|Ga0099792_11089601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009162\|Ga0075423_10776325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300009545\|Ga0105237_11460427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300010043\|Ga0126380_10212019	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300010048\|Ga0126373_10387678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1419	Open in IMG/M
3300010358\|Ga0126370_12575478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300010359\|Ga0126376_13154531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300010364\|Ga0134066_10293791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300010371\|Ga0134125_10419923	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300010371\|Ga0134125_12578319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300010396\|Ga0134126_11422316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300010397\|Ga0134124_10342387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1406	Open in IMG/M
3300012200\|Ga0137382_11019120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012202\|Ga0137363_11279885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012206\|Ga0137380_10324917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1375	Open in IMG/M
3300012208\|Ga0137376_10252125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1530	Open in IMG/M
3300012208\|Ga0137376_11788010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012209\|Ga0137379_10957190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300012209\|Ga0137379_11283510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012212\|Ga0150985_121624262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012357\|Ga0137384_10815254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300012376\|Ga0134032_1245542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012685\|Ga0137397_10408987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300012922\|Ga0137394_10306244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300012923\|Ga0137359_11491870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300012925\|Ga0137419_10044062	All Organisms → cellular organisms → Bacteria	2837	Open in IMG/M
3300012929\|Ga0137404_10031656	All Organisms → cellular organisms → Bacteria	3918	Open in IMG/M
3300012929\|Ga0137404_11251568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012944\|Ga0137410_11316833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012971\|Ga0126369_10090361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2744	Open in IMG/M
3300013102\|Ga0157371_11593810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300013296\|Ga0157374_10140833	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300013307\|Ga0157372_12238263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300013308\|Ga0157375_11467442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300014056\|Ga0120125_1064896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300015245\|Ga0137409_11218134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300015356\|Ga0134073_10427031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300015373\|Ga0132257_103915615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300015374\|Ga0132255_106254773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017966\|Ga0187776_10785109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300018064\|Ga0187773_10305817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300019886\|Ga0193727_1096228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300019888\|Ga0193751_1167002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300021344\|Ga0193719_10400989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300021377\|Ga0213874_10041755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300022557\|Ga0212123_10410804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300023058\|Ga0193714_1031402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300025320\|Ga0209171_10650652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300025905\|Ga0207685_10277492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300025906\|Ga0207699_10452088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300025906\|Ga0207699_11479728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300025910\|Ga0207684_11108894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025914\|Ga0207671_10917331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300025915\|Ga0207693_10929978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300025928\|Ga0207700_10841867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300025928\|Ga0207700_11273691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300025928\|Ga0207700_11515235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300025929\|Ga0207664_10408702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300025933\|Ga0207706_11300213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300025942\|Ga0207689_11164651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300025945\|Ga0207679_12100592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300025960\|Ga0207651_12086390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300027565\|Ga0209219_1011050	All Organisms → cellular organisms → Bacteria → Acidobacteria	2093	Open in IMG/M
3300027635\|Ga0209625_1035734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300027773\|Ga0209810_1357390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300027842\|Ga0209580_10055904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1849	Open in IMG/M
3300028047\|Ga0209526_10273362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300031446\|Ga0170820_14859146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6776	Open in IMG/M
3300031718\|Ga0307474_10076544	All Organisms → cellular organisms → Bacteria → Acidobacteria	2486	Open in IMG/M
3300031753\|Ga0307477_10851256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300031754\|Ga0307475_10011019	All Organisms → cellular organisms → Bacteria → Acidobacteria	6016	Open in IMG/M
3300031754\|Ga0307475_10598466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300031945\|Ga0310913_10888592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300032783\|Ga0335079_10866428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300033158\|Ga0335077_11156851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.09%
Host-Associated	Host-Associated	20.00%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.36%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	2.73%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.73%
Roots	Host-Associated → Plants → Roots	1.82%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.73%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_01925070	2170459016	Switchgrass, Maize And Mischanthus Litter	QDIMARYQIPANTPFDAISTSSRGYHQDDIRQYQGRFSKEDQKHFDEAYEHWVENRRKNDRDDIAKDEGEMLEIMARYNIPRDVPYDALASGARGY
INPhiseqgaiiFebDRAFT_1045966902	3300000364	Soil	DKHARKMEEIMARYRIPPDTPFDAIATSGGESRHYDVRQFQGRFSHDDQKKFDKAYEEWTEHRRKHDRDDVAKDEGKMLEIMARYNIPRDVPYDVLASGARGY*
JGI11615J12901_100287071	3300000953	Soil	VDTPFDAIVSSGFGAHQVDVRQYQGRLNHDDQKKFDKAYEDWVEHRRKNDHDDVAKDEGKMLEIMSRYNIPRDVPYEALASGSRGY*
Ga0062590_1021600491	3300004157	Soil	VKSPVYFNYAARQAADATSTGASRRYDVRQYQGRFSKEDQKLFDGAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIPRDVPYDALASGARGY*
Ga0066676_111261631	3300005186	Soil	IATSTGDSRHYDYREFQGRFSSDDQKKFDHEYREWQDDRRKVDRDGVAKHEGKMQELMARYNIPRDVPYDMLASANRGY*
Ga0066675_100539796	3300005187	Soil	DTIATSNGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQQDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0065704_103033261	3300005289	Switchgrass Rhizosphere	YRIPADTPFDAVATSGATGHRYDVREFQGRFNHDDQKKFDKAYEHWVEHRRRNDRDDVAKDEGEMLEVMSRYRIPRDVPYDALASSALGH*
Ga0070671_1006708012	3300005355	Switchgrass Rhizosphere	TIATGNGYSRHYDVREYQGRFSKDDQKKFDEAYEEWLEHRRKGDRDDIAKEEGKMQELMARYNIPRDVAYDALASGGRGY*
Ga0070713_1003970411	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DDIDKHARNMEQIMQRNGIPPDTPFDVIATGNGYNRHIDIRQFQGRMSPDDQKKYDKAYEKWQTDRAKHDRDDLAKDEGKMQEIMARYNIPRDVPYDALASGNRGY*
Ga0070713_1016635721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MEQIMQRDGIPPNTPFASIATTNGYGQHYDARQYQGRFTPDDQKKFDKAYEKWRSDRAKHDRDDYAKDEGKLQEIMAKYSIPRDVPYDVLVSGNRGY*
Ga0070710_104430003	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQRYNIPPNTPFDTIATANGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQKDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0070710_107475182	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	NMEQIMQRDGIPPNAPFASIATTNGYGQHYDVRQYQGRFTPDDQKKFDKAYEKWRSDRAKHDRDDYAKDEGKLQEIMAKYSIPRDVPYDVLVSGNRGY*
Ga0066687_107709701	3300005454	Soil	ARNMEEIMQRNGIPPDTPFDSIASVGGYNRHIDVREYQGRLSPDDQKKYDKAYEKWQTDRAKRDRDDIAKDEGKMQEIMAKYNIPRDVPYDALASGNRGY*
Ga0070706_1017175421	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PANIRFDAIATVNGYSGHYDYREFRGRLSPDDQRKFDKEYEHWLDDRRKGDRDDVAKHEGKMQEIMSRYNIPRDVPYDDIASGGRGY*
Ga0070698_1017818181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IRFDAIATVNGYSGHYDYREFRGRLSPDDQRKFDKEYEHWLDDRRKGDRDDVAKHEGKMQEIMSRYNIPRDVPYDDIASGGRGY*
Ga0070699_1018305281	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AKNDRHDINKHARKMEEIMRRYNIPPDTPFDAVATSNGYSPHYDVRQFQGRFSSEDQKKFDKAYEHWLEDRRKSDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY*
Ga0070739_104278901	3300005532	Surface Soil	EIMNRYNIPPNTPFAQIATVSNLPHTDVTQYQGRFSPDDQKKYDKAYEHWQEDQAKHDRSKMYKDEGEMQEIMARYNIPRDVPFSALASGNRGY*
Ga0070731_109665122	3300005538	Surface Soil	NIPPNTPFNSIATNGYSQQHTDVRDFQGRFSPEDQKHFDKAYEKWLHDRRKHDRDDIARDEDRMQQIMARYNIPRDVPYDALSSGGRGY*
Ga0070693_1004725801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	FDTIATANGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQKDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0066661_105839122	3300005554	Soil	IMARYHIAADTPFDVIATSTGDSRHYDYRQFQGKLSPDDQKKFDHEYREWQEKRRKGDRDGVAKHEGKMQELMARYNIPRDVPYDVLASAYRGY*
Ga0066699_108486092	3300005561	Soil	IMARYNIPPNTPFSAIATAAGAPHYDYRQFQGRFSPDDQKNFDKAYEHWLKDRAKNDRDDVAKDEGKMQQIMARYNIPRDVPYDLLASGGRGY*
Ga0070664_1010490061	3300005564	Corn Rhizosphere	WQKANADNDRDDINDHARKMQEIMARYRIPGDTPFDLIATSTGASRRYDVRQYQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIPRDVPYDALASGARGY*
Ga0066702_103009941	3300005575	Soil	DSIASVGGYNRHIDVREYQGRLSPDDQKKYDKAYEKWQTDRAKRDRDDIAKDEGKMQEIMAKYNIPRDVPYDALASGNRGY*
Ga0066708_106849252	3300005576	Soil	KNDRDDIDKHARNMEEIMQRNGIPPDTPFDSIASVGGYNRHIDVREYQGRLSPDDQKKYDKAYEKWQTDRAKRDRDDIAKDEGKMQEIMAKYNIPRDVPYDALASGNRGY*
Ga0066654_106207432	3300005587	Soil	KHARKMEEIMARYHIAADTPFDVIATSTGDSRHYDYRQFQGKFSPDDQKKFDHEYREWQEKRREGDRDGVAKHEGKMQELMARYNIPRDVPYDVLASAYRGY*
Ga0066903_1026232091	3300005764	Tropical Forest Soil	YNIPPDTPFDQIATVTGYGGHVDVRQYQGRLSADDQKHFDKAYEHWRSDRARRDQDDVAKDEGKMQEIMAKYNIPRGVPYDALASGNRGY*
Ga0068863_1022766941	3300005841	Switchgrass Rhizosphere	MQEIMARYRIPGDTPFDLIATSTGASRRYDVRQFQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIPRDVPYD
Ga0070712_1006454472	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DDIDKHARNMEEIMQRYNIPPNTPFDTIATANGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQKDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0097621_1000961831	3300006237	Miscanthus Rhizosphere	DKHARRMDDIMARYRIPLDTPFDAIATTSANTRAYDVRQYQGKFSHDDQEKFDKAYEHFVEHRRKHDRDDAARDEGRMQEIMAKYNIPRDVPYDELASS*
Ga0066658_103403062	3300006794	Soil	TPFDTIATANGYAPRVDYRRYQGRFSPDDQKKFDKAYEKWQEDRAKHDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0073928_112387381	3300006893	Iron-Sulfur Acid Spring	RDDIDKHARRMEEIMARYNIPQDTPFQAIASSNGYARPNDARQFQGRFSPEDQRRFDKSYEHWLHDRRKHDRDDVARDEDRMQEIMARYQIPREVPYDTLASGGRGY*
Ga0075424_1021659302	3300006904	Populus Rhizosphere	RKMEDTMARYQIPPDTPFSLIATSSGDHHYDVRQFQGRFSHDDQKKFDKAYEDWTEHRRKRDRDDIAKDEGKMQEIMARYNIPRDVPYDALASGGRGY*
Ga0066710_1026788081	3300009012	Grasslands Soil	DTPFDAVATSNGYSPHYDVRQFQGRFSSEDQKKFDKAYEHWLEDRRKSDRDDLTKDEGKMQEIMARYNIPRDVPYDVLASGARGY
Ga0099830_111793101	3300009088	Vadose Zone Soil	EIMARYNIPQGTPFDAIATTNGYSRHYDYREFQGRLSAEDQEKFDKEYEHWMHDRRKNDRDDIAKHEGKMQEIMARYNIPRDVPYDLIASTGRRY*
Ga0105245_124567241	3300009098	Miscanthus Rhizosphere	FETIATGNGYSRHYDVREYQGRFSKDDQKKFDEAYEEWLEHRRKGDRDDIAKEEGKMQELMARYNIPRDVAYDALASGGRGY*
Ga0099792_110896011	3300009143	Vadose Zone Soil	YNIPRDTPFDAIATTNEYSHHYDAREFQGRFSHDDQKKFDKAYEEWLEDRRKNDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY*
Ga0075423_107763252	3300009162	Populus Rhizosphere	PPDTPFDVIATSTGGDRHYDYREFQGRFSPDDQKKFDHKYREWQEERRERDRDGVAKHEGKMQELMARYNIPRDVPYDVLASANRGY*
Ga0105237_114604271	3300009545	Corn Rhizosphere	KHARNMEELMQRNNIPQNTPFNAIATTNGYAPRMDVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEEKLNEIMAKYNIPRDVPYNVLVSGNRGY*
Ga0126380_102120191	3300010043	Tropical Forest Soil	TPFDVIATSTGDDRHYDYREFQGRFSPDDQKKFDHEYREWQEERRERDRDGVAKHEGKMQELMARYNIPRDVPYDVLASANRGY*
Ga0126373_103876782	3300010048	Tropical Forest Soil	MEEIMSRYNIPQDTPFDAIATANGYAPHYDARQYQGRLSPEDQRKYDKAYEKWQSDRARHDRDDIAKDEGKMQEIMAKYKIPRNVPYDVLASGNRGY*
Ga0126370_125754781	3300010358	Tropical Forest Soil	QRYNIPPDTPFDQIATVTGYGGHVDVRQYQGRLSADDQKHFDKAYEHWRNDRARRDQDDVAKDEGKMQEIMAKYNIPRGVPYDALASGNRGY*
Ga0126376_131545311	3300010359	Tropical Forest Soil	NTRFVDIATVNGYAPRVDIRQYQGRFSPSDQKDYDKAYEHWQKDRARGDRDDTYKDEGKMQQIMAKYNIPRAVPYDALASGNRGY*
Ga0134066_102937912	3300010364	Grasslands Soil	RYNITPNTPFDAIATTNGYSQHYDVREYQGRLSPEDQNKFNKEYREWLEDRREGDRNGIAKREGKMQEIMARYNIPRDVPYDVIASGGGGY*
Ga0134125_104199231	3300010371	Terrestrial Soil	NMEQIMQRDNIPQNTPFNAIATTSGYAPRENVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEEKLNEIMAKYNIPRDVPYDALVSGNRGY*
Ga0134125_125783191	3300010371	Terrestrial Soil	NIPPNTPFAQIATTSGGPRINVAQYQGRFSPDDQKKFDKAYEKWQEDRAKHDRDDIYKDEGKMEEVMAKYNIPRDVPFDALASGNRGY*
Ga0134126_114223161	3300010396	Terrestrial Soil	KHARNMEQIMNRYNIPPNTPFAQIATTSGGPRINVAQYQGRFSPDDQKKFDKAYEKWQEDRAKHDRDDIYKDEGKMEEVMAKYNIPRDVPFDALASGNRGY*
Ga0134124_103423871	3300010397	Terrestrial Soil	PFDAVATSGATGHRYDVREFQGRFNHDDQKKFDKAYEHWVEHRRRNDRDDVAKDEGEMLEVMSRYRIPRDVPYDALASSALGH*
Ga0137382_110191201	3300012200	Vadose Zone Soil	DKNDGDDIDKHARKMEDIMARYQIPPNTPFDAIATSGGESRHYDVRQFQGRFSHDDQKKFDKAYEDWTEHRRKRDRDDVARDEGKMLEIMARYNIPRDVPYEVLASGARGY*
Ga0137363_112798852	3300012202	Vadose Zone Soil	YNIPANAPFDAIATSNGYSRHYDVREFQGRLSPDDQNKFNKEYREWLEERREGDRNRIAKHEGKMQEIMARYNIPRDVPYDVIASGGGY*
Ga0137380_103249173	3300012206	Vadose Zone Soil	ARYHIAPDTPFDVIATSTGDSRHYDYRQFQGKFSPDDQKKFDHEYREWQEERREGDRDGVAKHEGKMQELMARYNIPRDVPYDVLASGNRGY*
Ga0137376_102521252	3300012208	Vadose Zone Soil	RDDIDKHARKMEDIMARYRIPPDTPFDAIATSGGDARHYDVRQFQGRFSHEDQKKFDKAYEDWTEHRRKRDRDDIAKDEGKMLEIMARYNIPRDVPYDVLASGARGY*
Ga0137376_117880101	3300012208	Vadose Zone Soil	GHARKMEELMRRYNIPPNTPFDTIATSNGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQQDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0137379_109571901	3300012209	Vadose Zone Soil	MEDIMIRYNIPANAPFGAIATSNGYSRHYDVREFQARLSPEDQQKFNKEYEHWLNDRRKGDRDDIAKHEGKMQEIMARYNIPRDVPYDVIASGGRGY*
Ga0137379_112835102	3300012209	Vadose Zone Soil	ARYGIPVDTRFDSIATTSGESHHNDIRQFQGRFSKDDQKHFDDAYEHWVKDRRKNDRDDVAKDEGKMLEIMARYNIPRDVPYDALASGARGY*
Ga0150985_1216242621	3300012212	Avena Fatua Rhizosphere	PQNTPFNAIATTSGYAPRENVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEEKLNEIMAKYNIPRDVPYDALVSGNRGY*
Ga0137384_108152541	3300012357	Vadose Zone Soil	RYNIPQGTPFDAIATTNGYSRHYDYREFQGRLSAEDQEKFDKEYEHWMNDRRKNDRDDIAKHEGKMQEIMARYNIPRDVPYDLIASTGRRY*
Ga0134032_12455422	3300012376	Grasslands Soil	MEQIMQRDNIPQNTPFNAIATTSGYAPRENVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEEKLNEIMAKYNIPRDVPYDALVSGNRGY*
Ga0137397_104089871	3300012685	Vadose Zone Soil	HDINKHARKMEEIMRRYNIPPDTPFDVVATSNGYAPRYDVRQFQGKFSPEDQKKFDKAYEHWLEHRRKSDRDDIAKDEGKMLEIMARYNIPRDVPYDMLASGARGY*
Ga0137394_103062441	3300012922	Vadose Zone Soil	EYGKWQEANAKNDRDDIDKHARKMEDIMARYRIPPDTPFDAIATSGGDTRHYDARQFQGRFSHQDQKKFDKAYEDWTEHRRKRDRDDVAKDEGKMLEIMARYNIPRDVPYDVLASGARGY
Ga0137359_114918701	3300012923	Vadose Zone Soil	NTPFDVIATSNGYSRHYDYREFQTRLSPDDQKKFNKEYSEWLEERRENDRNGIAKHEGKMQEIMARYNIPRDVPYDEIASSGRGY*
Ga0137419_100440621	3300012925	Vadose Zone Soil	HARKMEEIMARYNVPPDTPFDALASSNGYSQRYDAREFQGRFSHDDQKKFDKAYEHWLEDRRKSDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY*
Ga0137404_100316564	3300012929	Vadose Zone Soil	FDALATSNGYSPRYDVRQFQGRFSPEDRKKFDKAYEHWLEDRRKSDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY*
Ga0137404_112515682	3300012929	Vadose Zone Soil	MRRYNIPPDTPFDAIATSNGYAPRYDARQFQGRFSPEDQKKFDKAYEHWLEHRRKGDRDDVAKDEGKMLEIMSRYSIPRDVPYDMLASGARGY*
Ga0137410_113168331	3300012944	Vadose Zone Soil	YNIPRDTPFDAIATSNGYSPHYDAREFQGRFSHDDQKKFDKAYEEWLEDRRKNDRDDLAKDEGKMQEIMARYNIPRDVPYDLLASGARGY*
Ga0126369_100903611	3300012971	Tropical Forest Soil	RNMEQIMQRYNIPPNTPFDQISTAAGYGGHVDVREYQGRLSADDQKHFDKAYEHWQSDRARRDEDDVAKDEGKMQEIMAKYNIPRGVPYDALASGNRGY*
Ga0157371_115938101	3300013102	Corn Rhizosphere	HARKMQEIMARYRIPGDTPFDLIATSTGASRRYDVRQFQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIRRDVPYDALASGARGY*
Ga0157374_101408333	3300013296	Miscanthus Rhizosphere	MEQIMQRDNIPQNTPFNAIATTSGYAPRENVREYQGRFSPDDQKKFDKAYEKWQKDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0157372_122382631	3300013307	Corn Rhizosphere	NAIATTSGYAPRENIREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEQKLNEIMAKYNIPRDVPYDALVSGNRGY*
Ga0157375_114674421	3300013308	Miscanthus Rhizosphere	NADNDRDDINDHARKMQEIMARYRIPGDTPFDLIATSTGASRRYDVRQFQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIPRDVPYDALASGARGY*
Ga0120125_10648961	3300014056	Permafrost	PLGLPPGTPFDAIATTNGYSRHYDYREFQGRLSAEDQEKFDKEYEHWMNDRRKNDRDDIAKHEGKMQELMSRYNIPRDVPYDLIASTGRHY*
Ga0137409_112181342	3300015245	Vadose Zone Soil	YNIPRDTPFDAIATSNGYSPHYDAREFQGRFSHDDQKKFDKAYEEWLEDRRKNDRDDLAKDEGKMQEIMARYNIPRDVPYDMLASGGRGY*
Ga0134073_104270312	3300015356	Grasslands Soil	IPPNTPFDTIATSNGYAPHVDYRRYQGRFSPDDQKKFDKAYEKWQQDRAKNDRDDLAKDEGKMQEVMAKYNVPRDVPYDVLVSGNRGY*
Ga0132257_1039156151	3300015373	Arabidopsis Rhizosphere	RIPGDTPFDLIATSTGASRRYDVRQFQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEDKMLEIMARYNIPRDVPYDALASGARGY*
Ga0132255_1062547731	3300015374	Arabidopsis Rhizosphere	ARKMEDIMARYRIPADTPFDAVATSGATGHRYDVREFQGRFNHDDQKKFDKAYEHWVEHRRRNDRDDVAKDEGEMLEVMSRYRIPRDVPYDALASSALGH*
Ga0187776_107851091	3300017966	Tropical Peatland	MEDIMVRYNIPPDTPFDAVATSNGYSDHYNLRQFQGRFSPDDQKRFDKAYEHWVNDRRKRDRDDIAKDEGKMQEIMARYRIPRDVPYGALASGARGY
Ga0187773_103058172	3300018064	Tropical Peatland	MEDIMVRYNIPPDTPFDAVATSNGYSDHYNLRQFQGRFSPDDQKRFDKAYEHWVNDRRKRDRDDIAKDEGKMQEIMARYRIPRDVPYGALASGARG
Ga0193727_10962282	3300019886	Soil	ARYNIPRDTPFDAVATSGGNSLHYDVREYQGRFSPDDQKKFDKAYEEWMEHRGKGDRHETAEEEGKMQELMARYNIPRDLPYDALASGARGH
Ga0193751_11670022	3300019888	Soil	MARYNIPQGTPFDAIATTSGYSRHYDYREFQGRLSAEDQEKFDKEYEHWMNDRRKNDRDDIAKHEGKMQEIMARYNIPRDVPYDLIATTGRH
Ga0193719_104009891	3300021344	Soil	PFDAIASSNRDYHHDDVREFQGRFSKEDQKHFDEAYEHWVDHRRKNDRDDVAKDEGKMLEIMARYNIPRDVPYDALSSGARGH
Ga0213874_100417551	3300021377	Plant Roots	RDDIDKHARKLDTIMARNNISPDTPFDAVATSSPYSRHYDYGQFQRRFSPEDQKKFDKAYEHWLNDRRKRDRDDIAKDEGRMQEIMTRYNIPRDVPYDALASATRGY
Ga0212123_104108042	3300022557	Iron-Sulfur Acid Spring	EYDKWQRSSARNDRDDIDKHARRMEEIMARYNIPQDTPFQAIASSNGYARPNDARQFQGRFSPEDQRRFDKSYEHWLHDRRKHDRDDVARDEDRMQEIMARYQIPREVPYDTLASGGRGY
Ga0193714_10314021	3300023058	Soil	NDRHEIDEHARKMQSIMARYQIPADTPFDAIASSNRDYHHDDVREFQGRFSKEDQKHFDEAYEHWVDHRRKNDRDDVAKDEGKMLEIMARYNIPRDVPYDALSSGARGH
Ga0209171_106506521	3300025320	Iron-Sulfur Acid Spring	RDDIDKHARRMEEIMARYNIPQDTPFQAIASSNGYARPNDARQFQGRFSPEDQRRFDKSYEHWLHDRRKHDRDDVARDEDRMQEIMARYQIPREVPYDTLASGGRGY
Ga0207685_102774922	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	RNGIPPDTPFDVIATGNGYNRHIDIRQFQGRMSPDDQKKYDKAYEKWQTDRAKHDRDDLAKDEGKMQEIMARYNIPRDVPYDALASGNRGY
Ga0207699_104520881	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MEQIMQRDGIPPNTPFASIATTNGYGQRYDVRQYQGRFTPDDQKKFDKAYEKWRSDRAKHDRDDYAKDEGKLQEIMAKYSIPRDVPYDVLVSGNRGY
Ga0207699_114797281	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	HEGKMQEIMARYNIPPNTPFDAIVTTNGYSRHYDYRDFQGRLSAEDQEKFNKEYDHWLNDRRKGDRDDIAKHEGKMQEIMSRYNIPRDVPYDVIASSGRSY
Ga0207684_111088941	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PANIRFDAIATVNGYSGHYDYREFRGRLSPDDQRKFDKEYEHWLDDRRKGDRDDVAKHEGKMQEIMARYNIPRDVPYDNIASGGRGY
Ga0207671_109173312	3300025914	Corn Rhizosphere	KHARNMEELMQRNNIPQNTPFNAIATTNGYAPRMDVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEEKLNEIMAKYNIPRDVPYNVLVSGNRGY
Ga0207693_109299782	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DTPFDTIATGNGYNRHIDVRQFQGRMSPDDQKKYDKAYEKWQTDRAKNDRDDLAKDEGKMQEMMAKYNIPRDVPYDALASGNRGY
Ga0207700_108418672	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	IPPDTPFASIATVAGYAPHYDVRQYQGRLSPDDQKKFDKAYEHWQSDRARHDRDDIAKDEGKMQEIMAKYNIPRDVPYDVLASGNRGY
Ga0207700_112736911	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ARNMEEIMQRNGIPQDTPFDRVATVAGYAPHYDIRQYQGRLSPDDQKRFDKAYEKWQRDRARHDRDDIAKDEGKMEEIMAKYNIPRGVPYDALASGNRGY
Ga0207700_115152351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	DIDKHARNMEQIMQRDGIPPNTPFASIATTNGYGQRYDVRQYQGRFTPDDQKKFDKAYEKWRSDRAKHDRDDYAKDEGKLQEIMAKYSIPRDVPYDVLVSGNRGY
Ga0207664_104087021	3300025929	Agricultural Soil	DIDKHARNMEELMQRNNIPQNTPFNAIATTNGYAPRMDVREYQGRFSPDDQKKFDKAYEKFQRDRAKHDRDDYAKDEQKLNEIMAKYNIPRDVPYDALVSGNRGY
Ga0207706_113002131	3300025933	Corn Rhizosphere	FETIATGNGYSRHYDVREYQGRFSKDDQKKFDEAYEEWLEHRRKGDRDDIAKEEGKMQELMARYNIPRDVAYDALASGGRGY
Ga0207689_111646511	3300025942	Miscanthus Rhizosphere	RIPADTPFDAVATSGATGHRYDVREFQGRFNHDDQKKFDKAYEHWVEHRRRNDRDDVAKDEGEMLEVMSRYRIPRDVPYDALASSALGH
Ga0207679_121005921	3300025945	Corn Rhizosphere	EKWQKANADNDRDDINDHARKMQEIMARYRIPGDTPFDLIATSTGASRRYDVRQFQGRFSKEDQKRFDDAYEDWVEHRRRNDRDDVAKNEGKMLEIMARYNIPRDVPYDALASGARGY
Ga0207651_120863901	3300025960	Switchgrass Rhizosphere	IIARYNIPRDTPFETIATGNGYSRHYDVREYQGRFSKDDQKKFDEAYEEWLEHRRKGDRDDIAKEEGKMQELMARYNIPRDVAYDALASGGRGY
Ga0209219_10110503	3300027565	Forest Soil	FQAIATSNGYARPNDARQFQGRFSADDQKKYDKAYEHWLHDRRKHDRDDVARDEDRMQEIMARYNIPRDVPYDTLASGARGY
Ga0209625_10357341	3300027635	Forest Soil	NARSDREEIDKHARRMEEIMARYNIPQDTPFQAIATWNGYARPNDARQFQGRFSADDQKKYDKAYEHWLHDRRKHDRDDVARDEDRMQEIMARYNIPRDVPYDTLASGSRGY
Ga0209810_13573901	3300027773	Surface Soil	EEIMNRYNIPPNTPFAQIATVSNLPHTDVTQYQGRFSPDDQKKYDKAYEHWQEDQAKHDRSKMYKDEGEMQEIMARYNIPRDVPFSALASGNRGY
Ga0209580_100559042	3300027842	Surface Soil	EEYDKWQRANSRNDRSDVDKHARKMEDIMARYNIPQDTPFNAIATANGYAPHTDIRDYQGRFSPDDQKSFDKAYEHWLKDTRKHDRDDVSRDENRMQEIMARYNIPRNVPYDALASGGRG
Ga0209526_102733623	3300028047	Forest Soil	REEIDKHARRMEEIMARYNIPQDTPFQAIATWNGYARPNDARQFQGRFSADDQKKYDKAYEHWLHDRRKHDRDDVARDEDRMQEIMARYNIPRDVPYDTLASGSRGY
Ga0170820_148591461	3300031446	Forest Soil	DVIATGNGYNRHIDIRQFQGRMSPDDQKKYDKAYEKWQADRAKHDRDDLAKDEGKMQEMMAKYNIPRDVPYDALASGNRGY
Ga0307474_100765443	3300031718	Hardwood Forest Soil	RDDIDKHARRMEEIMARYNIPQDSPFQAIATSNGYARPNDVRQFQGRFSADDQRKYDKAYEHWLHDRRKHDRDDVARDEDRMQEIMARYNIPRDVPYDSLASGSRGY
Ga0307477_108512561	3300031753	Hardwood Forest Soil	DKWQRANSRNDRSDVDKHARKMEDIMARYNIPQDTPFNAIATANGYAPHTDIRDYQGRFSPDDQKSFDKAYEHWLKDTRKHDRDDVSRDENRMQEIMARYNIPRNVPYDALASGGRGY
Ga0307475_100110191	3300031754	Hardwood Forest Soil	DDIDKHARRMEEIMARYNIPQDTPFQAIATSNGYARPNDVRQFQGRFSADDQRKYDKAYEHWLHDRRKHDRDDVARDEDRMQEIMARYNIPRDVPYDSLASGSRGY
Ga0307475_105984661	3300031754	Hardwood Forest Soil	DDIAKHARNMGEIMQRNGVPPNTPFDAVATNSGYVSHSDFRQYQGRLSPDDQKRFDKAYEKFQKDRAKHDRDDIAKDEQKMNEILARYNIPRDVPYDVLASANRGY
Ga0310913_108885922	3300031945	Soil	ANARNDRDDIDKHARRMEDIMARYRIPPDTPFDTIATSGSPRHYDAREYQGRFNADDQKKFDKAYEHWLEHRRKHDRDDIAKDEDHMQEIMARYRIPRDVPYGELASGGRGY
Ga0335079_108664282	3300032783	Soil	NTPFADIATVQGYAPRINVAEYQGRFSPDDQKKFDKDYEHWQNDRARHDRDDIAKDEGKMQELMAKYNIPRDVPYSALSSGNRGY
Ga0335077_111568512	3300033158	Soil	NTPFADIATVQGYAPRINVAEYQGRFSPDDQKKFDKDYEHWQTDRARNNRDDIAKDEGKMQELMAKYNIPRDVPYSALSSGNRGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087554

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences