Metagenome / Metatranscriptome Family F087590

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087590
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	103 residues
Representative Sequence	VKKMIVLMVIVAVLALPLLAQAGGTRIQGRFVVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Number of Associated Samples	95
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.73 %
% of genes near scaffold ends (potentially truncated)	28.18 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.909 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.27% β-sheet: 17.31% Coil/Unstructured: 64.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01627	Hpt	20.91
PF01435	Peptidase_M48	13.64
PF02518	HATPase_c	9.09
PF13229	Beta_helix	2.73
PF04392	ABC_sub_bind	0.91
PF00583	Acetyltransf_1	0.91
PF08281	Sigma70_r4_2	0.91
PF00034	Cytochrom_C	0.91
PF13493	DUF4118	0.91
PF03480	DctP	0.91
PF05721	PhyH	0.91
PF00535	Glycos_transf_2	0.91
PF09335	SNARE_assoc	0.91
PF00211	Guanylate_cyc	0.91
PF12706	Lactamase_B_2	0.91
PF01638	HxlR	0.91
PF00296	Bac_luciferase	0.91
PF05987	DUF898	0.91
PF10282	Lactonase	0.91
PF14791	DNA_pol_B_thumb	0.91
PF00753	Lactamase_B	0.91
PF08447	PAS_3	0.91
PF09954	DUF2188	0.91
PF02653	BPD_transp_2	0.91
PF13185	GAF_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.91
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.91
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.91
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.91
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.91
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.91
COG4269	Uncharacterized membrane protein YjgN, DUF898 family	Function unknown [S]	0.91
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.82 %
Unclassified	root	N/A	27.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	12.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	12.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.27 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	12.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.27 %
Apicomplexa	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	12.73 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	7.27 %
Conoidasida	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida	0.91 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.91 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.91 %
Coccidia	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Thiorhodococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Thiorhodococcus drewsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	0.91 %
Eucoccidiorida	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida	0.91 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Eimeriorina	suborder	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida → Eimeriorina	0.91 %
Thiorhodococcus drewsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	0.91 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Cryptosporidiidae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida → Eimeriorina → Cryptosporidiidae	0.91 %
Thiorhodococcus drewsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	0.91 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Cryptosporidium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida → Eimeriorina → Cryptosporidiidae → Cryptosporidium	0.91 %
Thiorhodococcus drewsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	0.91 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.36 %
Cryptosporidium muris	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida → Eimeriorina → Cryptosporidiidae → Cryptosporidium → Cryptosporidium muris	0.91 %
Thiorhodococcus drewsii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	0.91 %
Janthinobacterium lividum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	0.91 %
Deltaproteobacteria bacterium ADurb.Bin510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_3936	All Organisms → cellular organisms → Bacteria	5837	Open in IMG/M
3300000550\|F24TB_11023489	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300000559\|F14TC_100577904	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300000956\|JGI10216J12902_106148611	All Organisms → cellular organisms → Bacteria	2717	Open in IMG/M
3300001431\|F14TB_101141338	Not Available	583	Open in IMG/M
3300003994\|Ga0055435_10097056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300003995\|Ga0055438_10234312	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300004019\|Ga0055439_10064151	All Organisms → cellular organisms → Bacteria → Proteobacteria	1027	Open in IMG/M
3300004022\|Ga0055432_10015877	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300004479\|Ga0062595_100151051	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005172\|Ga0066683_10310009	Not Available	981	Open in IMG/M
3300005289\|Ga0065704_10636489	Not Available	572	Open in IMG/M
3300005332\|Ga0066388_100102684	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300005332\|Ga0066388_100154929	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300005439\|Ga0070711_100608432	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300005445\|Ga0070708_100125206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2374	Open in IMG/M
3300005445\|Ga0070708_101845423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodococcus → Thiorhodococcus drewsii	561	Open in IMG/M
3300005446\|Ga0066686_10901715	Not Available	581	Open in IMG/M
3300005450\|Ga0066682_10279480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300005468\|Ga0070707_101643404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300005536\|Ga0070697_100824404	Not Available	821	Open in IMG/M
3300005536\|Ga0070697_101547410	Not Available	593	Open in IMG/M
3300005545\|Ga0070695_101456255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	569	Open in IMG/M
3300005546\|Ga0070696_100133615	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300005617\|Ga0068859_100313247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1663	Open in IMG/M
3300005718\|Ga0068866_10596782	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005841\|Ga0068863_102536006	Not Available	522	Open in IMG/M
3300005843\|Ga0068860_100269915	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1660	Open in IMG/M
3300005937\|Ga0081455_10126585	Not Available	2004	Open in IMG/M
3300006049\|Ga0075417_10081346	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300006049\|Ga0075417_10205762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	933	Open in IMG/M
3300006175\|Ga0070712_100040483	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300006796\|Ga0066665_10109346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2041	Open in IMG/M
3300006844\|Ga0075428_100004260	All Organisms → cellular organisms → Bacteria	15745	Open in IMG/M
3300006845\|Ga0075421_100004453	All Organisms → cellular organisms → Bacteria	16900	Open in IMG/M
3300006845\|Ga0075421_100058300	All Organisms → cellular organisms → Bacteria	4882	Open in IMG/M
3300006845\|Ga0075421_100122625	All Organisms → cellular organisms → Bacteria → Proteobacteria	3261	Open in IMG/M
3300006847\|Ga0075431_100497433	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300006854\|Ga0075425_102013557	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Conoidasida → Coccidia → Eucoccidiorida → Eimeriorina → Cryptosporidiidae → Cryptosporidium → Cryptosporidium muris	646	Open in IMG/M
3300006871\|Ga0075434_100044916	All Organisms → cellular organisms → Bacteria	4382	Open in IMG/M
3300006871\|Ga0075434_101828616	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300006880\|Ga0075429_100018770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5990	Open in IMG/M
3300006880\|Ga0075429_101336107	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006904\|Ga0075424_101212088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300006914\|Ga0075436_100235031	Not Available	1302	Open in IMG/M
3300006969\|Ga0075419_10277953	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300009012\|Ga0066710_101383846	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009088\|Ga0099830_10966968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300009098\|Ga0105245_11154106	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300009100\|Ga0075418_10005398	All Organisms → cellular organisms → Bacteria	14475	Open in IMG/M
3300009100\|Ga0075418_10117269	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300009101\|Ga0105247_11098249	Not Available	627	Open in IMG/M
3300009147\|Ga0114129_10000018	All Organisms → cellular organisms → Bacteria	125757	Open in IMG/M
3300009176\|Ga0105242_10835820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300009553\|Ga0105249_10637460	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1123	Open in IMG/M
3300010154\|Ga0127503_11293456	Not Available	535	Open in IMG/M
3300010336\|Ga0134071_10381807	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010360\|Ga0126372_10433099	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300010375\|Ga0105239_13563535	Not Available	506	Open in IMG/M
3300010399\|Ga0134127_11544079	Not Available	737	Open in IMG/M
3300012201\|Ga0137365_11083352	Not Available	578	Open in IMG/M
3300012202\|Ga0137363_10024187	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300012203\|Ga0137399_11348080	Not Available	599	Open in IMG/M
3300012204\|Ga0137374_10080648	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300012204\|Ga0137374_11235728	Not Available	520	Open in IMG/M
3300012206\|Ga0137380_11035610	Not Available	701	Open in IMG/M
3300012350\|Ga0137372_10906961	Not Available	624	Open in IMG/M
3300012353\|Ga0137367_10407649	Not Available	963	Open in IMG/M
3300012354\|Ga0137366_10064383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium lividum	2797	Open in IMG/M
3300012355\|Ga0137369_10071697	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300012358\|Ga0137368_10167626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1600	Open in IMG/M
3300012358\|Ga0137368_10297698	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300012360\|Ga0137375_10415681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1170	Open in IMG/M
3300012361\|Ga0137360_10005851	All Organisms → cellular organisms → Bacteria	7553	Open in IMG/M
3300012532\|Ga0137373_10229953	Not Available	1508	Open in IMG/M
3300012923\|Ga0137359_10406239	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1207	Open in IMG/M
3300012929\|Ga0137404_10057776	All Organisms → cellular organisms → Bacteria	2999	Open in IMG/M
3300012930\|Ga0137407_10612205	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012944\|Ga0137410_11278598	Not Available	634	Open in IMG/M
3300012976\|Ga0134076_10468374	Not Available	571	Open in IMG/M
3300013297\|Ga0157378_10626823	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300014269\|Ga0075302_1067574	Not Available	751	Open in IMG/M
3300015372\|Ga0132256_100056385	All Organisms → cellular organisms → Bacteria	3670	Open in IMG/M
3300017659\|Ga0134083_10164837	Not Available	903	Open in IMG/M
3300019789\|Ga0137408_1173808	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025905\|Ga0207685_10338046	Not Available	756	Open in IMG/M
3300025910\|Ga0207684_11093805	Not Available	664	Open in IMG/M
3300025916\|Ga0207663_10741298	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300025922\|Ga0207646_10888184	Not Available	791	Open in IMG/M
3300025923\|Ga0207681_11748633	Not Available	519	Open in IMG/M
3300025927\|Ga0207687_11674697	Not Available	545	Open in IMG/M
3300025961\|Ga0207712_10197709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1592	Open in IMG/M
3300026089\|Ga0207648_10707526	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300026118\|Ga0207675_102027369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300026538\|Ga0209056_10089071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin510	2564	Open in IMG/M
3300027873\|Ga0209814_10060761	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300027873\|Ga0209814_10170155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300027880\|Ga0209481_10435440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300027909\|Ga0209382_10002728	All Organisms → cellular organisms → Bacteria	25196	Open in IMG/M
3300027909\|Ga0209382_10279730	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300028047\|Ga0209526_10248013	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300031469\|Ga0170819_14269037	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300031720\|Ga0307469_10208727	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300031720\|Ga0307469_11056867	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031720\|Ga0307469_11527341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300032174\|Ga0307470_11208177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300032205\|Ga0307472_101776898	Not Available	611	Open in IMG/M
3300032829\|Ga0335070_10004920	All Organisms → cellular organisms → Bacteria	15665	Open in IMG/M
3300032893\|Ga0335069_10025944	All Organisms → cellular organisms → Bacteria	8021	Open in IMG/M
3300033433\|Ga0326726_10014730	All Organisms → cellular organisms → Bacteria	6831	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.73%
Host-Associated	Host-Associated	37.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.18%
Plants	Host-Associated → Plants	37.27%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.27%
Marine	Environmental → Aquatic → Marine	3.64%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Peat	Environmental → Terrestrial → Peat	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.18%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_00318060	2199352025	Soil	VKKMIVLMVIVAVLALPLLAQAGGTRTQGRFIVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
F24TB_110234892	3300000550	Soil	VKKMTVLMVIVAVLALPLLAQAGGTRIQGRFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDHSRPKCLAKPNGYWVCS*
F14TC_1005779041	3300000559	Soil	VKKMTVLMVIVAVLALPLLAQAGGTRIQGRFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
JGI10216J12902_1061486113	3300000956	Soil	MILLVLMCAVLAMPGLAQAGTRVGGSRAHSGPIVQAPFFWRPFFYPGPFAYGYPGGLNYAFPGPYVSAGTGEPYSYGYPGPYSYGTMEYSRPNCFAQPDGRWLCS*
F14TB_1011413381	3300001431	Soil	MTVLMVIVAVLALPLLAQAGGTRIQGRFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDHSRPRCLAKPNGYWVCS*
Ga0055435_100970561	3300003994	Natural And Restored Wetlands	VKKLILLVLIVAVLAIPMLAHAGGTRVHGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFFSSGGGEPYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS*
Ga0055438_102343121	3300003995	Natural And Restored Wetlands	VKKLILLVLICAVVAMPVLAHAGGTRVRGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFVSSGGGEAYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS*
Ga0055439_100641511	3300004019	Natural And Restored Wetlands	VKKLILLVLICAVVAMPVLAHAGGTRVRGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFVSSGGGEPYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS*
Ga0055432_100158772	3300004022	Natural And Restored Wetlands	VKKLILLVLICVVVAMPMLAHAGGTHIRGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFVSSGGGEAYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS*
Ga0062595_1001510512	3300004479	Soil	VKKMIVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0066683_103100092	3300005172	Soil	VKKMILLVVIVVGMALPVLAHAGGTRIQGRFTVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0065704_106364891	3300005289	Switchgrass Rhizosphere	VKKMIVLMVIVAVLALPLLAQAGGTRIQGRFVVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0066388_1001026842	3300005332	Tropical Forest Soil	VKRTILLVLICAVLAMPGLTQAGARVHGRSGHSGATVQGPFFWRRFFYPGPFVYGYPGGLDYAFPGPYVSADGGATYSYGYPGPYTYGTLEYSSPNCSPKPDGQWLCSTRQRS*
Ga0066388_1001549292	3300005332	Tropical Forest Soil	MIVLVLICAVLAMPGLAQAGTRVRGSHTPSGSTVQVPFYWHPFFYPGPFAYGYPGGFNYAFPGPYVSAGERAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCG*
Ga0070711_1006084321	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVIASPVLAHAGGAMRTSRFTVYGPFYWHPFFYPGPFSYGYPGGLTYAYPGPYLSDSGGAAYTYGYPGPYSYGTWEYAKPYC*
Ga0070708_1001252062	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MILLVLMCAVLAMPGLAQAGTRVGGSRAHSGPIVQAPFFWHPFFYPGPFAYGYPGGLNYAFPGPYVSGGAGEPYSYGYPGPYSYGTLEYSRPNCFAKPDGRWLCS*
Ga0070708_1018454231	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRMILLVLICLLAMPSLTQAGTRVRGSHAHSGPTVQGPFYWHPFFYPGPFVYGDPGGLNYAFPGPYVSAGGAAPYTYGYPGPYNYGTWEYSSPNCVAKPDGMWLCS*
Ga0066686_109017151	3300005446	Soil	VKKMILLVVIVVGMALPVLAHAGGTRIQGRFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0066682_102794801	3300005450	Soil	VKKMILLVVIVVGMALPVLAHAGGTRIQGRFTVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYS
Ga0070707_1016434041	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MILLVLMCAVLAMPGLAQAGTRVGGSRAHSGPIVQAPFFWHPFFYPGPFAYGYPGGLNYAFPGPYVSGGAGEPYSYGYPGPYSYGTLEYSRPNCFAKPDG
Ga0070697_1008244042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VKKMIVLVVIFAVMAIPMLAHAGGMHVQGGRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYFSSGGEESYTYGYPGPFSYGTWEYSRPKCLAKPDGLWVCS*
Ga0070697_1015474101	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VKRMILLVLICLLAMPSLTQAGTRVRGSHAHSGPTVQGPFYWHPFFYPGPFVYGDPGGLNYAFPGPYVSAGGAAPYTYGYPGPYNYGTWEYSSPNCSAKPDGMWLCS*
Ga0070695_1014562552	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SLTQAGTRVRGSHAHSGPTVQGPFYWHPFFYPGPFVYGDPGGLNYAFPGPYVSAGGAAPYTYGYPGPYNYGTWEYSSPNCSAKPDGMWLCS*
Ga0070696_1001336152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VKRMIWLVLICLLAMPSLAQAGTRVRGSHGHSGATVQGPFYWHPFFYPGPFVYGDPGGLNYAFPGPYVSAGGAAPYTYGYPGPYNYGTWEYSSPNCSAKPDGMWLCS*
Ga0068859_1003132472	3300005617	Switchgrass Rhizosphere	VKKMIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWRPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0068866_105967822	3300005718	Miscanthus Rhizosphere	AVLAPPLLAQAWGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0068863_1025360061	3300005841	Switchgrass Rhizosphere	MFPTLAMKKMILLLALLAVIASPVLAHAGGAMRTSRFTVYGPFYWHPFFYPGPFSYGYPGGLTYAYPGPYLSDSGGAAYTYGYPGPYSYGTWEYAKPYC*
Ga0068860_1002699152	3300005843	Switchgrass Rhizosphere	VKKMIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0081455_101265853	3300005937	Tabebuia Heterophylla Rhizosphere	MKRTILLVLICAVLAMPGLTQAGTRLRGSSAHSGPTVQVQVPLYWHPFFSPGPFAYGYPGGLNYAFPGPYVRADGGAPYSYGYPGPYSYGTWEYSSPNCSAKPDGQWLCSARQRS*
Ga0075417_100813461	3300006049	Populus Rhizosphere	MILLVLICAVLALPGLAQAGTRVRGSHAPSGSTVQVPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGDRAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCS*
Ga0075417_102057621	3300006049	Populus Rhizosphere	MKRKILLVLICAVLAMPGLAQARTRVRGSHTNSGATVQGPFYWHPFFYPGPFAFGYPGGLNYAYPGPYVSAGGGAPYSYGYPGPYSYGTWEYSSPSCSAQPDGRWLCG*
Ga0070712_1000404837	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MFPTLAMKKMILLLALLAVIASPVLAHAGGAMRTSRFTVYGPFYWHPFFYPGPFSYGYPGGLTYAYPGPYLSDSGGAAYTYGYPGPYSYGTWEYAKPYCYAKPNGYWVCS*
Ga0066665_101093462	3300006796	Soil	VKKMILLVVIVVGMALPALAHAGGTRIQGRFTVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0075428_1000042609	3300006844	Populus Rhizosphere	VKRMIVLVLICGVFAMSGLAHPRTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSGGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG*
Ga0075421_1000044535	3300006845	Populus Rhizosphere	VKRMIVLVLICGVFAMSGLAHPGTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSGGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG*
Ga0075421_1000583004	3300006845	Populus Rhizosphere	MKRKILLVLICAVLAMPGLAQARTRVRGSHTNSGATVQGPFYWHPFFYPGPFAFGYPGGLNYAYPGPYVSAGGGASYSYGYPGPYSYGTWEYSSPSCSAQPDGRWLCG*
Ga0075421_1001226254	3300006845	Populus Rhizosphere	MILLVLICAVLAMPGLAQAGTRVRGSGAHSGPIVQGPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGGGAPYSYGYPGPYNYGTLEYSSPNCFEKPDGRWLCS*
Ga0075431_1004974334	3300006847	Populus Rhizosphere	VLICAVLAMPGLAQAGTRVRGSHTPSGSTVQIPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGGGAPYSYGYPGPYNYGTLEYSSPNCFEKPDGRWLCS*
Ga0075425_1020135571	3300006854	Populus Rhizosphere	MILLVLMCAVLAMPGLAQAGTRVGGSRAHSGPIVQAPFFWRPFFYPGPFAYGYPGGLNYAFPGPYVNAGSEEPYSYGYPGPYSYGTMEYSRPNCFAKPDGRWLCS*
Ga0075434_1000449163	3300006871	Populus Rhizosphere	VKKMILLVLICAVLALPGLAQAGTRVRGSHAPSGSTVQVPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGDRAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCS*
Ga0075434_1018286161	3300006871	Populus Rhizosphere	PGLAQAGTRVGGSRAHSGPIVQAPFFWRPFFYPGPFAYGYPGGLNYAFPGPYVNAGSEEPYSYGYPGPYSYGTMEYSRPNCFAKPDGRWLCS*
Ga0075429_1000187703	3300006880	Populus Rhizosphere	VKRMIVLVLICGVFAMSGLAHPRTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSRGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG*
Ga0075429_1013361072	3300006880	Populus Rhizosphere	MILLVLICAVLALPGLAQAGTRVRGSHAPSGSTVQVPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGDRAPYIYGYPGPFNYGTLEYSSPNCFEKPDGRWLCS*
Ga0075424_1012120882	3300006904	Populus Rhizosphere	VKKMILLVVIVVAMALPVLAHAGGTRIQGRFVVQGPFYWHPFFYPGPFTYGYPGGLTYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0075436_1002350312	3300006914	Populus Rhizosphere	MILPVLICAVLAMPGLAQAGTRVRGSHTPSGSTVQIPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGDRAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCS*
Ga0075419_102779532	3300006969	Populus Rhizosphere	VLICAVLAMPGLAQARTRVRGSHTNSGATVQGPFYWHPFFYPGPFAFGYPGGLNYAYPGPYVSAGGGASYSYGYPGPYSYGTWEYSSPSCSAQPDGRWLCG*
Ga0066710_1013838462	3300009012	Grasslands Soil	VKKMILLVVIVAVLAMPMLADAGGSRMSGRFVVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKGLAKPNGYWVCS
Ga0099830_109669682	3300009088	Vadose Zone Soil	VRAVKKIILLVVIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPVPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCVAKPNGYWVCS*
Ga0105245_111541062	3300009098	Miscanthus Rhizosphere	LALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0075418_100053989	3300009100	Populus Rhizosphere	MIVLVLICGVFAMSGLAHPRTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSRGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG*
Ga0075418_101172693	3300009100	Populus Rhizosphere	MKRKILLVVICAVLAMPGLAQARTRVRGSHTNSGATVQGPFYWHPFFYPGPFAFGYPGGLNYAYPGPYVSAGGGASYSYGYPGPYSYGTWEYSSPSCSAQPDGRWLCG*
Ga0105247_110982491	3300009101	Switchgrass Rhizosphere	MIVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0114129_1000001825	3300009147	Populus Rhizosphere	MIVLVLICGVFAMSGLAHPGTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSGGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG*
Ga0105242_108358201	3300009176	Miscanthus Rhizosphere	MIVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKC
Ga0105249_106374601	3300009553	Switchgrass Rhizosphere	MIVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGTEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0127503_112934562	3300010154	Soil	APPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0134071_103818072	3300010336	Grasslands Soil	VVGMALPVLAHAGGTRIQGRFIVQGPFYWHPFFYPGPFTDGYPGGLNYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0126372_104330991	3300010360	Tropical Forest Soil	MIVLVLICAVLAMPGLAQAGTRVRGGHTPSGSTVQVPFYWHPFFYPGPFAYGYPGGFNYAFPGPYVSAGERAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCG*
Ga0105239_135635352	3300010375	Corn Rhizosphere	LALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLYYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0134127_115440791	3300010399	Terrestrial Soil	MIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGY
Ga0137365_110833522	3300012201	Vadose Zone Soil	VRAVKKIILFLVIVAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137363_100241872	3300012202	Vadose Zone Soil	VKKMILLVVIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPGPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCVAKPNGYWVCS*
Ga0137399_113480802	3300012203	Vadose Zone Soil	VKKVILLVVILAVIAIPVFAHAGGVRIQGRFIVQGPFYWHPFFYPGPFSYGYPGGLTYAYPGPYVSYSGGEPYTYGYPGPYSYGTWEYS
Ga0137374_100806483	3300012204	Vadose Zone Soil	VRAVKKTILLVVILAVIAMPMLADAGGTRISGRFVVQGPFYWHPFFYPGPLSYGYPGGLNYAYPGPYFSSGAEESYTYGYPGPYSYGTLDYSRPKCSAKPDGYWVCS*
Ga0137374_112357282	3300012204	Vadose Zone Soil	VRAVKKTILLVVILAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCSAKPNGYWVCS*
Ga0137380_110356101	3300012206	Vadose Zone Soil	VKKIILFLVIVAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137372_109069611	3300012350	Vadose Zone Soil	VRAVKKIILLVVIVAVIAMPMLADAGGTRISGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137367_104076492	3300012353	Vadose Zone Soil	VRAVKKIILLVVIVAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137366_100643832	3300012354	Vadose Zone Soil	VRAVKKIILLVVIVAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPDGYWVCS*
Ga0137369_100716973	3300012355	Vadose Zone Soil	VKKTILLVVILAVIAMPMLADAGGTRISGRFVVQGPFYWHPFFYPGPLSYGYPGGLNYAYPGPYFSSGAEESYTYGYPGPYSYGTLDYSRPKCLAKPDGYWVCS*
Ga0137368_101676261	3300012358	Vadose Zone Soil	VRAVKKVILFLVIVAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTWDYSRPKCLAKPDGYW
Ga0137368_102976981	3300012358	Vadose Zone Soil	VKKTILLVVILAVIAMPMLADAGGTRISGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYFSSGAEESYTYGYPGPYSYGTLDYSRPKCLAKPDGYWVCS*
Ga0137375_104156811	3300012360	Vadose Zone Soil	VKKTILLVVILAVIAMPMLADAGGTRISGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGAEESYTYGYPGPYSYGTLDYSRPKCSAKPDGYWVCS*
Ga0137360_100058513	3300012361	Vadose Zone Soil	MILLVVIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPGPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCVAKPNGYWVCS*
Ga0137373_102299532	3300012532	Vadose Zone Soil	VKKTILLVVILAVIAMPMLADAGGTRISGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYFSSGAEESYTYGYPGPYSYGTLDYSRPKCLAKPDGYWVCS*
Ga0137359_104062392	3300012923	Vadose Zone Soil	MILLVTIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGFNYAFPGPYVSSGVEESYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137404_100577763	3300012929	Vadose Zone Soil	MILLVVIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPGPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137407_106122051	3300012930	Vadose Zone Soil	IVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPGPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0137410_112785982	3300012944	Vadose Zone Soil	VKKVILLVVILAVIAMPVLAHAGGVRIQGRFIVQGPFYWHPFCYPCPCSYGYPGGLSYAYPGPYVSYSGGEPYTYGYPGPYSYGTWEYSRPYCFAKSNGYWVCS*
Ga0134076_104683741	3300012976	Grasslands Soil	MILLVVIVVGMALPVLAHAGGTRIQGRFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0157378_106268232	3300013297	Miscanthus Rhizosphere	MIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0075302_10675742	3300014269	Natural And Restored Wetlands	VKKLILLVLICAVVAMPVLAHAGGTRVHGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFFSSGGGEPYTYGYPGPFSYGTWEYSRPHCFA
Ga0132256_1000563852	3300015372	Arabidopsis Rhizosphere	MIVLMVIVAVLALPLLAQAGGTRTQGRFIVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS*
Ga0134083_101648372	3300017659	Grasslands Soil	VKKMILLVVIVVGMALPVLAHAGGTRIQGRFIVQGPFYWHPFFYPGPFTDGYPGGLNYAYPGPYVSAGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0137408_11738082	3300019789	Vadose Zone Soil	VKKMILLVVIVAVIAMPMLADAGGTRMSGRFVVQGPFYWHPFFYPGPFSYGYPGGLNYAFPGPYVSSGAEESSYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0207685_103380462	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0207684_110938051	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKKMIVLVVIFAVMAIPMLAHAGGMHVQGGRAQGRFIVQGPFYWHPFFYPVPFSYGYPGGLNYAYPGPYFSSGGEESYTYGYPGPFSYGTWEYSRPKCLAKP
Ga0207663_107412982	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	KKMILLLALLAVIASPVLAHAGGAMRTSRFTVYGPFYWHPFFYPGPFSYGYPGGLTYAYPGPYLSDSGGAAYTYGYPGPYSYGTWEYAKPYC
Ga0207646_108881842	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKKMIVLVVIFAVMAIPMLAHAGGMHVQGGRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYFSSGGEESYTYGYPGPFSYGTWEYSRPKCLAKPDGLWVCS
Ga0207681_117486331	3300025923	Switchgrass Rhizosphere	LAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPDGYWVCS
Ga0207687_116746971	3300025927	Miscanthus Rhizosphere	IVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0207712_101977092	3300025961	Switchgrass Rhizosphere	VKKMIVLMVIVAVLAPPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0207648_107075262	3300026089	Miscanthus Rhizosphere	MIVLMVIVAVLALPLLAQAGGTRIQGGFIVQGPFYWHPFFYPGPFTYGYPGGLNYAYPGPYVSSGPEEPYTYGYPGPYSYGTCDYSRPKCLAKPNGPLPSAFVSQIWMATAPRTFSSPKTFSR
Ga0207675_1020273691	3300026118	Switchgrass Rhizosphere	MILLVLMCAVLAMPGLAQAGTRVGGSRAHSGPIVQAPFFWHPFFYPGPFAYGYPGGLNYAFPGPYVSGGAGEPYSYGYPGPYSYGTLEYSRPNCFA
Ga0209056_100890712	3300026538	Soil	VKKMILLVVIVVGMALPALAHAGGTRIQGRFTVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0209814_100607612	3300027873	Populus Rhizosphere	MILLVLICAVLALPGLAQAGTRVRGSHAPSGSTVQVPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGDRAPYIYGYPGPFNYGTLEYSSPNCAAIPDGRWLCS
Ga0209814_101701551	3300027873	Populus Rhizosphere	MKRKILLVLICAVLAMPGLAQARTRVRGSHTNSGATVQGPFYWHPFFYPGPFAFGYPGGLNYAYPGPYVSAGGGAPYSYGYPGPYSYGTWEYSSPSCSAQPDGRWLCG
Ga0209481_104354402	3300027880	Populus Rhizosphere	VKRMIVLVLICGVFAMSGLAHPRTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSGGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG
Ga0209382_1000272825	3300027909	Populus Rhizosphere	VKRMIVLVLICGVFAMSGLAHPGTRVRGGGAHSGSTVQMPFFWHPFFYPGPFAYGYPGGLNYSYPGPYVSSGGGARYSYGYPGPYNYGTWEYSSPNCSAKPDGRWLCG
Ga0209382_102797303	3300027909	Populus Rhizosphere	MILLVLICAVLAMPGLAQAGTRVRGSGAHSGPIVQGPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGGGAPYSYGYPGPYNYGTLEYSSPNCFEKPDGRWLCS
Ga0209526_102480132	3300028047	Forest Soil	VKKMILLVVIVAVIAMPVFAHAGGVRIQGRFIVQGPFYWHPFFFPGPFSYGYPGGFTYAYPGPYVSYSGGEPYTYGYPGPFSYGTWDYARPYCFAKANGYWVCS
Ga0170819_142690372	3300031469	Forest Soil	MIVLMVIVAVLALPLLAQAGGTRTQGRFIVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRPKCLAKPNGYWVCS
Ga0307469_102087273	3300031720	Hardwood Forest Soil	MILLVLICAVLAMPRLAQAGTRVRGSSAHSGPIVQVPFYWHPFFYPGPFAYGYPGGLNYAFPGPYVSAGGGAPYSYGYPGPYSYG
Ga0307469_110568672	3300031720	Hardwood Forest Soil	VKRMILLVLICLLAMPSLTQAGTRVRGSHAHSGPTVQGPFYWHPFFYPGPFVYGDPGGLNYAFPGPYVSAGGAAPYTYGYPGPYNYGTWEYSSPNCSAKPDGMWLCS
Ga0307469_115273411	3300031720	Hardwood Forest Soil	ILLVVILAVIALPMLADAGGTRMSGRFTVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGPEESYTYGYPGPYSYGTWEYSRPKCLAKPNGYWVCS
Ga0307470_112081771	3300032174	Hardwood Forest Soil	LVVILAVIALPMLADAGGTRMSGRFTVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPYVSSGPEESYTYGYPGPYSYGTWEYSRPKCLAKPNGYWVCS
Ga0307472_1017768981	3300032205	Hardwood Forest Soil	VKKMIVLMVIVAVLALPLLAQAGGTRTQGRFIVQGPFYWHPFFYPGPFTYGYPGGLAYAYPGPYVSSGPEEPYTYGYPGPYSYGTWDYSRP
Ga0335070_1000492010	3300032829	Soil	VKKLILLVLISAVLAMPVLAHAEGTRVHGRAHGSHAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFVSSGGGESYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS
Ga0335069_100259447	3300032893	Soil	VKKLILLVLISAVLAMSVLAHAEGTRVHGRAHGSHAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFVSSGGGESYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS
Ga0326726_100147305	3300033433	Peat Soil	VKKLILLVLILTVVAMPVLAHAGGTRVHGSRAQGRFIVQGPFYWHPFFYPGPFSYGYPGGLNYAYPGPFFSSGGGEPYTYGYPGPFSYGTWEYSRPHCFAKPDGYWFCS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087590

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences