Metagenome / Metatranscriptome Family F087608

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087608
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	75 residues
Representative Sequence	VLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Number of Associated Samples	87
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.73 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	92.73 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (65.455 % of family members)
Environment Ontology (ENVO)	Unclassified (70.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01717	Meth_synt_2	19.09
PF02515	CoA_transf_3	2.73
PF00248	Aldo_ket_red	1.82
PF08241	Methyltransf_11	0.91
PF13671	AAA_33	0.91
PF01977	UbiD	0.91
PF13442	Cytochrome_CBB3	0.91
PF00296	Bac_luciferase	0.91
PF13378	MR_MLE_C	0.91
PF13450	NAD_binding_8	0.91
PF00872	Transposase_mut	0.91
PF13183	Fer4_8	0.91
PF13185	GAF_2	0.91
PF13472	Lipase_GDSL_2	0.91
PF01546	Peptidase_M20	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	19.09
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.73
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.91
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.91
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
All Organisms	root	All Organisms	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
cellular organisms	root	All Organisms → cellular organisms	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.09 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.00 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.73 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.45 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.64 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.64 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.64 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	3.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	0.91 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.91 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.91 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.64 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	3.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %
Dankookia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia	0.91 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.91 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.64 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	3.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.91 %
unclassified Reyranella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella	0.91 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.64 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	3.64 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Reyranella sp. CPCC 100927	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp. CPCC 100927	0.91 %
Rhizobium leucaenae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leucaenae	0.91 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105274882	Not Available	553	Open in IMG/M
3300005332\|Ga0066388_100578141	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300005332\|Ga0066388_101556307	Not Available	1160	Open in IMG/M
3300005332\|Ga0066388_107734086	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005439\|Ga0070711_101277410	Not Available	636	Open in IMG/M
3300005518\|Ga0070699_101973365	Not Available	534	Open in IMG/M
3300005602\|Ga0070762_10293484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1022	Open in IMG/M
3300006174\|Ga0075014_100132633	Not Available	1199	Open in IMG/M
3300006175\|Ga0070712_100298852	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300006175\|Ga0070712_100898801	Not Available	763	Open in IMG/M
3300006953\|Ga0074063_13931279	Not Available	537	Open in IMG/M
3300006954\|Ga0079219_11472456	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010361\|Ga0126378_13305224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	512	Open in IMG/M
3300010376\|Ga0126381_103954324	Not Available	577	Open in IMG/M
3300010376\|Ga0126381_104883759	Not Available	515	Open in IMG/M
3300010398\|Ga0126383_11912416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300016341\|Ga0182035_11731975	Not Available	565	Open in IMG/M
3300016341\|Ga0182035_11981391	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300016357\|Ga0182032_10025241	Not Available	3536	Open in IMG/M
3300016371\|Ga0182034_12011258	Not Available	511	Open in IMG/M
3300016422\|Ga0182039_10395653	Not Available	1171	Open in IMG/M
3300017975\|Ga0187782_10778717	Not Available	739	Open in IMG/M
3300020580\|Ga0210403_10299149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1318	Open in IMG/M
3300021168\|Ga0210406_10963924	Not Available	637	Open in IMG/M
3300021433\|Ga0210391_11202176	Not Available	587	Open in IMG/M
3300021560\|Ga0126371_13754655	Not Available	512	Open in IMG/M
3300022529\|Ga0242668_1098298	Not Available	591	Open in IMG/M
3300022726\|Ga0242654_10272629	Not Available	614	Open in IMG/M
3300026999\|Ga0207949_1004378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1262	Open in IMG/M
3300027073\|Ga0208366_1001932	Not Available	1770	Open in IMG/M
3300027701\|Ga0209447_10086338	Not Available	862	Open in IMG/M
3300027727\|Ga0209328_10043747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1376	Open in IMG/M
3300027884\|Ga0209275_10264051	Not Available	947	Open in IMG/M
3300029701\|Ga0222748_1033311	Not Available	818	Open in IMG/M
3300030847\|Ga0075405_11986910	Not Available	566	Open in IMG/M
3300031231\|Ga0170824_107242260	Not Available	688	Open in IMG/M
3300031544\|Ga0318534_10415107	Not Available	772	Open in IMG/M
3300031546\|Ga0318538_10524060	Not Available	642	Open in IMG/M
3300031549\|Ga0318571_10027941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	1543	Open in IMG/M
3300031561\|Ga0318528_10243324	Not Available	964	Open in IMG/M
3300031572\|Ga0318515_10143873	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300031573\|Ga0310915_10222706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	1323	Open in IMG/M
3300031573\|Ga0310915_10999020	Not Available	584	Open in IMG/M
3300031668\|Ga0318542_10573719	Not Available	588	Open in IMG/M
3300031679\|Ga0318561_10066167	Not Available	1842	Open in IMG/M
3300031679\|Ga0318561_10204209	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031680\|Ga0318574_10242915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300031682\|Ga0318560_10143993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1259	Open in IMG/M
3300031719\|Ga0306917_10310585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	1219	Open in IMG/M
3300031724\|Ga0318500_10012196	All Organisms → cellular organisms → Bacteria → Proteobacteria	3056	Open in IMG/M
3300031724\|Ga0318500_10243897	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031724\|Ga0318500_10331444	Not Available	749	Open in IMG/M
3300031747\|Ga0318502_10701761	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300031751\|Ga0318494_10077448	Not Available	1801	Open in IMG/M
3300031751\|Ga0318494_10334452	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031763\|Ga0318537_10135131	Not Available	917	Open in IMG/M
3300031765\|Ga0318554_10022168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3325	Open in IMG/M
3300031777\|Ga0318543_10552711	Not Available	516	Open in IMG/M
3300031778\|Ga0318498_10215684	Not Available	869	Open in IMG/M
3300031779\|Ga0318566_10175294	Not Available	1064	Open in IMG/M
3300031780\|Ga0318508_1072487	Not Available	934	Open in IMG/M
3300031780\|Ga0318508_1166733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leucaenae	627	Open in IMG/M
3300031782\|Ga0318552_10229034	Not Available	942	Open in IMG/M
3300031792\|Ga0318529_10251988	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031796\|Ga0318576_10334904	Not Available	715	Open in IMG/M
3300031805\|Ga0318497_10136017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	1338	Open in IMG/M
3300031805\|Ga0318497_10358663	Not Available	814	Open in IMG/M
3300031819\|Ga0318568_10799078	Not Available	585	Open in IMG/M
3300031820\|Ga0307473_11492086	Not Available	512	Open in IMG/M
3300031821\|Ga0318567_10111199	Not Available	1490	Open in IMG/M
3300031831\|Ga0318564_10278482	Not Available	740	Open in IMG/M
3300031835\|Ga0318517_10188303	Not Available	928	Open in IMG/M
3300031859\|Ga0318527_10217638	Not Available	810	Open in IMG/M
3300031879\|Ga0306919_10028834	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300031879\|Ga0306919_10052505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2704	Open in IMG/M
3300031890\|Ga0306925_11286688	Not Available	727	Open in IMG/M
3300031893\|Ga0318536_10495854	Not Available	614	Open in IMG/M
3300031897\|Ga0318520_10080889	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300031910\|Ga0306923_11103591	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300031910\|Ga0306923_11486550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → unclassified Reyranella → Reyranella sp. CPCC 100927	709	Open in IMG/M
3300031942\|Ga0310916_10429723	Not Available	1124	Open in IMG/M
3300031942\|Ga0310916_10979291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	706	Open in IMG/M
3300031942\|Ga0310916_11357096	Not Available	583	Open in IMG/M
3300031945\|Ga0310913_10061216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2479	Open in IMG/M
3300031946\|Ga0310910_10035618	All Organisms → cellular organisms → Bacteria → Proteobacteria	3420	Open in IMG/M
3300031946\|Ga0310910_11130097	Not Available	609	Open in IMG/M
3300031947\|Ga0310909_10002072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12162	Open in IMG/M
3300032001\|Ga0306922_10980243	Not Available	873	Open in IMG/M
3300032025\|Ga0318507_10246487	Not Available	775	Open in IMG/M
3300032035\|Ga0310911_10727865	Not Available	574	Open in IMG/M
3300032039\|Ga0318559_10341815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696	Open in IMG/M
3300032051\|Ga0318532_10135309	Not Available	874	Open in IMG/M
3300032051\|Ga0318532_10167282	Not Available	781	Open in IMG/M
3300032052\|Ga0318506_10172249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	951	Open in IMG/M
3300032055\|Ga0318575_10385196	Not Available	711	Open in IMG/M
3300032059\|Ga0318533_11168281	Not Available	563	Open in IMG/M
3300032059\|Ga0318533_11176256	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300032060\|Ga0318505_10199776	Not Available	935	Open in IMG/M
3300032060\|Ga0318505_10273431	Not Available	796	Open in IMG/M
3300032064\|Ga0318510_10182553	Not Available	841	Open in IMG/M
3300032064\|Ga0318510_10558138	Not Available	500	Open in IMG/M
3300032065\|Ga0318513_10381419	Not Available	688	Open in IMG/M
3300032066\|Ga0318514_10097582	Not Available	1486	Open in IMG/M
3300032066\|Ga0318514_10308798	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300032067\|Ga0318524_10085786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	1547	Open in IMG/M
3300032067\|Ga0318524_10404188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	712	Open in IMG/M
3300032076\|Ga0306924_11051881	Not Available	890	Open in IMG/M
3300032089\|Ga0318525_10179705	Not Available	1087	Open in IMG/M
3300032090\|Ga0318518_10519417	Not Available	609	Open in IMG/M
3300032094\|Ga0318540_10515038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.18%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.18%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.36%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	65.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1052748821	3300000364	Soil	GTAEQVVAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGEXAIDVRRSPPDSG*
Ga0066388_1005781414	3300005332	Tropical Forest Soil	DRLRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAGAVKRLIPDGELAIDVRRSPPDSG*
Ga0066388_1015563072	3300005332	Tropical Forest Soil	RRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGAEELALSFAGPRPAVDAAYFVRAVKRLIPDGELAIDVRRSPPDSG*
Ga0066388_1077340861	3300005332	Tropical Forest Soil	RRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPHGELAIDVRRSPPDIC*
Ga0070711_1012774101	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPSDSA*
Ga0070699_1019733652	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG*
Ga0070762_102934841	3300005602	Soil	LSGIARPEMVGALDRLRRGERAGRVLDDSFISGFALAGTAEQVIAQAAQYRRAGADELALSFSGPRPAADAAYFARAVKRLIADGELAIDVRRSRPDSG*
Ga0075014_1001326331	3300006174	Watersheds	RLSGIARPEMVGALDRLRRGEHAVRVLDDHFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG*
Ga0070712_1002988523	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARALKRLMPDGELAIDVRRGPPDSG*
Ga0070712_1008988011	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG*
Ga0074063_139312792	3300006953	Soil	RAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG*
Ga0079219_114724561	3300006954	Agricultural Soil	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELAQSFAGPQPADAAYFARALKRLMPDGELAIDVRRSPPDSG*
Ga0126378_133052241	3300010361	Tropical Forest Soil	FISGFALAGTAEQVIAQASQYRRAGADELALSFAGPQPAADAAYLARAVKRLIPDGELAIDVRP*
Ga0126381_1039543242	3300010376	Tropical Forest Soil	SGFALAGTAEQVIAQAAQYRCAGADELALSFAGPQPPADAAYFARAVKRLIPDGELAIDVRRSPLDIC*
Ga0126381_1048837591	3300010376	Tropical Forest Soil	ISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAHFAGAVKRLIPDGELAIDVRRSPPDSG*
Ga0126383_119124161	3300010398	Tropical Forest Soil	DDRFISAFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADATYFARAVKRLIPDGELAIDVRRSPPDIC*
Ga0182035_117319752	3300016341	Soil	FISGFALAGTAEQVIAQAAQYGRAGVDELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVHRSPTNIW
Ga0182035_119813912	3300016341	Soil	VLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDAGRGPPDIC
Ga0182032_100252414	3300016357	Soil	RVLDDRFISGFALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0182034_120112581	3300016371	Soil	ERAGRVLDDRFISGFALAGTAEQVIAQAVQYRCAGADELALSFAGLQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0182039_103956532	3300016422	Soil	SGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYLARTVKRLIPDGELAIDVRPSPPDIG
Ga0187782_107787171	3300017975	Tropical Peatland	RFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDRELAIDVRRSPPDIG
Ga0210403_102991493	3300020580	Soil	RRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPRPAADAAYFARAVKRLIADGELAIDVRRSRPDSG
Ga0210406_109639241	3300021168	Soil	RFITGFVLAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKRLIPDGELAIDARRSPPDSG
Ga0210391_112021762	3300021433	Soil	MVGALDRLRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDARRSPPDSG
Ga0126371_137546551	3300021560	Tropical Forest Soil	RLRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDCAPPPSR
Ga0242668_10982981	3300022529	Soil	GALDRLRRGERAGRVLDDSFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARALKRLMPDGELAIDVRRSPPDSG
Ga0242654_102726292	3300022726	Soil	ARPEMVGALDRLRRGERAGRVLDDRFISGFALAGTAVQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0207949_10043782	3300026999	Forest Soil	VLDDRFISGFALAGTAEQVIAQVVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSRPDSG
Ga0208366_10019321	3300027073	Forest Soil	SGFALAGTAEQVIAQAVQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELPIDVRRSPPDSG
Ga0209447_100863382	3300027701	Bog Forest Soil	FISGFALAGTAEQVIAQAAQYRRAGADELALTFAGPQPAADAAYFARAVKRLIPDGEQAIDVRRSPPDSG
Ga0209328_100437471	3300027727	Forest Soil	ALAGTAEQVIAQAVQSRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELPIDVRRSPPDSG
Ga0209275_102640511	3300027884	Soil	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFSGPRPAADAAYFARAVKRLIADGELAIDVRRSRPDSG
Ga0222748_10333112	3300029701	Soil	ERAGRVLDDRFISGFALAGTAEQVVAQAAQYRRVGADELALSFAGPQPTADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0075405_119869101	3300030847	Soil	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGADELALSFAGSQPAADAAYFARAVKLLIPNGELAIDVRRSPPDSG
Ga0170824_1072422602	3300031231	Forest Soil	LRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRGAGADELALSFAGPQPAADAAYFARAVKRLIPDGEPAIDARRSPPDSG
Ga0318534_104151072	3300031544	Soil	VLDDRFISGFALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFARAVKHLIPDGELAIDVRRSPPDSG
Ga0318538_105240601	3300031546	Soil	AFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318571_100279411	3300031549	Soil	FALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318528_102433243	3300031561	Soil	SAFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318515_101438732	3300031572	Soil	FISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0310915_102227061	3300031573	Soil	ALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFALAVKRLIPDGELAIDVRRSPPDSG
Ga0310915_109990202	3300031573	Soil	DRLRRGERTGRVLDDRFISGFALAGTAEQVIEQAAQYRRAGADELALSFAGSQPATDAAYFARAVKRLIPDGELAIDVRRSPPNIG
Ga0318542_105737192	3300031668	Soil	ISGFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELVIDVRRSPPDIC
Ga0318561_100661671	3300031679	Soil	ISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYLARAVKRLRPDGELAIDRAPQPSR
Ga0318561_102042092	3300031679	Soil	VLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318574_102429152	3300031680	Soil	GALDRLRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318560_101439931	3300031682	Soil	TGRVLDDRFISGFALAGTAEQVIEQAAQYRRAGADELALSFAGSQPATDAAYFARAVKRLIPDGELAIDVRRSPPNIG
Ga0306917_103105853	3300031719	Soil	RRGERAARVLDDRFISGFALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFALAVKRLIPDGELAIDVRRSPPDSG
Ga0318500_100121961	3300031724	Soil	VLDDRFISSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0318500_102438972	3300031724	Soil	RRGERAGQVLDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318500_103314441	3300031724	Soil	RGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318502_107017611	3300031747	Soil	VGALDRLRRGERAGQVVDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318494_100774481	3300031751	Soil	GALDRLRRGERAGRVLDDRFISGFALAGTAEQVIAQAVQYRRAGTDELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSGRG
Ga0318494_103344521	3300031751	Soil	GFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLISDGELAIDVPRSPPDIG
Ga0318537_101351312	3300031763	Soil	YDLLAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318554_100221681	3300031765	Soil	GTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFVQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0318543_105527111	3300031777	Soil	LDDRFISGFALAGTAEQVIEQAAQYRRAGADELALSFAGSQPATDAAYFARAVKRLIPDGELAIDVRRSPPNIG
Ga0318498_102156841	3300031778	Soil	RYDLLAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318566_101752941	3300031779	Soil	AGQVLDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318508_10724871	3300031780	Soil	RVLDDRYISAFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318508_11667332	3300031780	Soil	FISGFALAGTAEQVIAQAVQYRRAGTDELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSGRG
Ga0318552_102290341	3300031782	Soil	CYDLLAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318529_102519881	3300031792	Soil	GFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318576_103349042	3300031796	Soil	VGRPVMVGTLDRLRRGERAGRVLDDRFIWSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIGVRRSPPDIC
Ga0318497_101360174	3300031805	Soil	AARVLDDRFISGFALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFALAVKRLIPDGELAIDVRRSPPDSG
Ga0318497_103586632	3300031805	Soil	PGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318568_107990782	3300031819	Soil	ISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0307473_114920862	3300031820	Hardwood Forest Soil	GFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDARRSPPDSG
Ga0318567_101111991	3300031821	Soil	AGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318564_102784821	3300031831	Soil	ISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0318517_101883033	3300031835	Soil	EQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318527_102176383	3300031859	Soil	CTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0306919_100288341	3300031879	Soil	FISSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0306919_100525052	3300031879	Soil	VLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAANFARAVKRLIPDGEVAIDVRRSPPDSG
Ga0306925_112866882	3300031890	Soil	GALERLRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318536_104958541	3300031893	Soil	FISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDAGRGPPDIC
Ga0318520_100808891	3300031897	Soil	RRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0306923_111035912	3300031910	Soil	RFISGFALAGTAEQVIEQAAQYRRAGADELALSFAGSQPATDAAYFARAVKRLIPDGELAIDVRRSPPNIG
Ga0306923_114865501	3300031910	Soil	FALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLISDGELAIDVPRSPPDIG
Ga0310916_104297232	3300031942	Soil	FISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPDADAAYFARAVKRLIPDGELAIDVRRSPPE
Ga0310916_109792911	3300031942	Soil	TAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELVIDVRRSPPDI
Ga0310916_113570962	3300031942	Soil	GFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPPADAAYFARAVKRLISDGELAIDVPVAPRTSARGE
Ga0310913_100612161	3300031945	Soil	RGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGQQPAADAAYLARAVKRLIPDSELAIDVRRNPPDSG
Ga0310910_100356185	3300031946	Soil	FALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0310910_111300972	3300031946	Soil	GRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDAGRGPPDIC
Ga0310909_100020721	3300031947	Soil	DRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPDADAAYFAQAVKRLIPDGELAIDVRRSPPE
Ga0306922_109802431	3300032001	Soil	GTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKRLIPDGEPVIDLRRSPPDRAKG
Ga0318507_102464871	3300032025	Soil	AGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPDADAAYFAQAVKRLIPDGELAIDVRRSPPE
Ga0310911_107278651	3300032035	Soil	RVLDDRFISGFALAGTAEQVIAQAAQYRLAGADELALSFAGPQPAADAAYFALAVKRLIPDGELAIDVRRSPPDSG
Ga0318559_103418152	3300032039	Soil	ISSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIGVRRSPPDIC
Ga0318532_101353091	3300032051	Soil	LRRLRRGERAGRVLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0318532_101672822	3300032051	Soil	VLDDRFISGFALAGNAEQVIAQAAQYRRAGADELALSFAGPQPAADAANFARAVKRLIPDGEVAIDVRRSPPDSG
Ga0318506_101722492	3300032052	Soil	ALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318575_103851962	3300032055	Soil	DRFISSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFAQAVKHLIPHGEPVIDLRRSPPDRAKG
Ga0318533_111682811	3300032059	Soil	ALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLISDGELAIDVPRSPPDIG
Ga0318533_111762562	3300032059	Soil	VLDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318505_101997761	3300032060	Soil	TAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDI
Ga0318505_102734311	3300032060	Soil	SGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPSR
Ga0318510_101825532	3300032064	Soil	AGRVLDDRFISGFALAGTAEQVIAQAVQYRCAGADELALSFAGLQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318510_105581382	3300032064	Soil	DLLAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSGRG
Ga0318513_103814192	3300032065	Soil	ISGFALAGTAEQVIAQAVQYRRAGTDELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSGRG
Ga0318514_100975823	3300032066	Soil	AGTAEQVIAQAAQYRRAGADELALSFAGPQPAVDAAYFAQAVKRLRPDGELAIDRAPQPS
Ga0318514_103087981	3300032066	Soil	DLLAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318524_100857861	3300032067	Soil	VLDDRFISGFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDSG
Ga0318524_104041881	3300032067	Soil	QVLDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0306924_110518811	3300032076	Soil	LAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLISDGELAIDVPRSPPDIG
Ga0318525_101797053	3300032089	Soil	LDRLRRGERAGRVLDDRFISAFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318518_105194171	3300032090	Soil	GQVIDDRFISSFALAGTAEQVIAQAVQYRCAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIDVRRSPPDIC
Ga0318540_105150382	3300032094	Soil	DRLRRGERAGRVLDDRFIWSFALAGTAEQVIAQAAQYRRAGADELALSFAGPQPAADAAYFARAVKRLIPDGELAIGVRRSPPDIC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087608

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences