NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087648

Metagenome / Metatranscriptome Family F087648

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087648
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 58 residues
Representative Sequence MRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADEVVDYAEDE
Number of Associated Samples 89
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.73 %
% of genes near scaffold ends (potentially truncated) 25.45 %
% of genes from short scaffolds (< 2000 bps) 83.64 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.091 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(16.364 % of family members)
Environment Ontology (ENVO) Unclassified
(27.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.909 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.67%    β-sheet: 11.90%    Coil/Unstructured: 71.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00196GerE 31.82
PF08448PAS_4 25.45
PF13522GATase_6 10.91
PF00989PAS 4.55
PF01594AI-2E_transport 3.64
PF13230GATase_4 3.64
PF06897DUF1269 1.82
PF10009DUF2252 1.82
PF13396PLDc_N 0.91
PF13426PAS_9 0.91
PF03706LPG_synthase_TM 0.91
PF02021UPF0102 0.91
PF11911DUF3429 0.91
PF02342TerD 0.91
PF03779SPW 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 3.64
COG4803Uncharacterized membrane proteinFunction unknown [S] 1.82
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.91
COG0792Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 familyReplication, recombination and repair [L] 0.91

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.09 %
UnclassifiedrootN/A0.91 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000597|AF_2010_repII_A1DRAFT_10164896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300002568|C688J35102_120892716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2074Open in IMG/M
3300004081|Ga0063454_100029735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1895Open in IMG/M
3300004156|Ga0062589_100170242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1527Open in IMG/M
3300004157|Ga0062590_102386161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
3300004633|Ga0066395_10271981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales916Open in IMG/M
3300005175|Ga0066673_10131220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1378Open in IMG/M
3300005179|Ga0066684_10174679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1377Open in IMG/M
3300005294|Ga0065705_10420077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300005329|Ga0070683_101300792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300005332|Ga0066388_100091900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3461Open in IMG/M
3300005332|Ga0066388_100109180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3257Open in IMG/M
3300005332|Ga0066388_100534773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1804Open in IMG/M
3300005332|Ga0066388_106463301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300005332|Ga0066388_106826735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium575Open in IMG/M
3300005338|Ga0068868_100647184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium941Open in IMG/M
3300005450|Ga0066682_10718133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300005468|Ga0070707_100008058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales9780Open in IMG/M
3300005526|Ga0073909_10069242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1328Open in IMG/M
3300005546|Ga0070696_101020372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300005547|Ga0070693_100655011All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005614|Ga0068856_100682611All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300005764|Ga0066903_100025047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6536Open in IMG/M
3300005764|Ga0066903_100113880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3724Open in IMG/M
3300005764|Ga0066903_100298506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2546Open in IMG/M
3300005764|Ga0066903_101099418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1465Open in IMG/M
3300005764|Ga0066903_101661610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1214Open in IMG/M
3300005764|Ga0066903_101924099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1133Open in IMG/M
3300005764|Ga0066903_102009883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1110Open in IMG/M
3300005764|Ga0066903_103846123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces806Open in IMG/M
3300005764|Ga0066903_105214799All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005764|Ga0066903_106986752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300005764|Ga0066903_108206868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium534Open in IMG/M
3300005843|Ga0068860_100615721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1092Open in IMG/M
3300006028|Ga0070717_10045287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3596Open in IMG/M
3300006031|Ga0066651_10332210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium816Open in IMG/M
3300006046|Ga0066652_101785785All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300006173|Ga0070716_100647512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria801Open in IMG/M
3300006175|Ga0070712_100534135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria987Open in IMG/M
3300006755|Ga0079222_10154389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1311Open in IMG/M
3300006791|Ga0066653_10102882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1307Open in IMG/M
3300006791|Ga0066653_10286674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales833Open in IMG/M
3300006903|Ga0075426_10639118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium796Open in IMG/M
3300009094|Ga0111539_10484358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1441Open in IMG/M
3300009098|Ga0105245_10291662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1598Open in IMG/M
3300009137|Ga0066709_100991373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1230Open in IMG/M
3300009137|Ga0066709_101628009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium922Open in IMG/M
3300009176|Ga0105242_10426845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1243Open in IMG/M
3300009551|Ga0105238_10542231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1167Open in IMG/M
3300009553|Ga0105249_10399362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1405Open in IMG/M
3300010048|Ga0126373_12518093All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300010154|Ga0127503_10291700All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300010333|Ga0134080_10541317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
3300010358|Ga0126370_10767494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria856Open in IMG/M
3300010358|Ga0126370_11165972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300010359|Ga0126376_10610443All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300010360|Ga0126372_10044913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2933Open in IMG/M
3300010361|Ga0126378_11533585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria756Open in IMG/M
3300010364|Ga0134066_10066091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium971Open in IMG/M
3300010366|Ga0126379_11558841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium766Open in IMG/M
3300010366|Ga0126379_12702324All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300010371|Ga0134125_11021083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium906Open in IMG/M
3300010396|Ga0134126_12912373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300010403|Ga0134123_10707145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium986Open in IMG/M
3300012207|Ga0137381_10845078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium793Open in IMG/M
3300012209|Ga0137379_10113925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2602Open in IMG/M
3300012285|Ga0137370_10031429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2760Open in IMG/M
3300012899|Ga0157299_10094767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium762Open in IMG/M
3300012948|Ga0126375_11731598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300012955|Ga0164298_10897180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300012960|Ga0164301_11268966All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012977|Ga0134087_10544249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300012986|Ga0164304_11497429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium558Open in IMG/M
3300012989|Ga0164305_11920652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300014326|Ga0157380_12439602All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300014969|Ga0157376_12020859All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300015357|Ga0134072_10248948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300015371|Ga0132258_10684588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2581Open in IMG/M
3300017947|Ga0187785_10001166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9198Open in IMG/M
3300018431|Ga0066655_10812219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300018433|Ga0066667_10960558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium737Open in IMG/M
3300018482|Ga0066669_10661934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria919Open in IMG/M
3300024055|Ga0247794_10123613All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300025922|Ga0207646_10001553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria28122Open in IMG/M
3300025927|Ga0207687_10041438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3162Open in IMG/M
3300025932|Ga0207690_10880874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria742Open in IMG/M
3300025939|Ga0207665_10803551All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300025944|Ga0207661_10414498All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1223Open in IMG/M
3300025961|Ga0207712_10422340All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300026041|Ga0207639_12129311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300026067|Ga0207678_11648057All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300026095|Ga0207676_10870884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium882Open in IMG/M
3300026300|Ga0209027_1022344All Organisms → cellular organisms → Bacteria2395Open in IMG/M
3300026308|Ga0209265_1049941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1291Open in IMG/M
3300026330|Ga0209473_1185770All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300026330|Ga0209473_1208164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium734Open in IMG/M
3300026530|Ga0209807_1219015Not Available654Open in IMG/M
3300027821|Ga0209811_10241523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria688Open in IMG/M
3300027874|Ga0209465_10197776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1003Open in IMG/M
3300027907|Ga0207428_10530136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium853Open in IMG/M
3300031199|Ga0307495_10039535All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300031720|Ga0307469_11329605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300031723|Ga0318493_10794048All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031939|Ga0308174_10001038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria12438Open in IMG/M
3300031939|Ga0308174_11047528All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300031996|Ga0308176_10051984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3368Open in IMG/M
3300031996|Ga0308176_12344998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300032074|Ga0308173_10384944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1230Open in IMG/M
3300032205|Ga0307472_100730585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria895Open in IMG/M
3300033290|Ga0318519_11013891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil16.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.09%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.18%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.64%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.73%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.82%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.82%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.82%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A1DRAFT_1016489613300000597Forest SoilMRCVECGGEKCDAQRGWVTVLSPSGTRRIHYCPDCMSELVSPSVVAEG
C688J35102_12089271633300002568SoilVQVMRCVECGCEKDPEQRGWVTVLSPSGALRIHYCPSCMVNLVSRATAAEDDV*
Ga0063454_10002973533300004081SoilVPHDRIGPGPIVEVMRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADEVVDYAEDE*
Ga0062589_10017024213300004156SoilCEREPSDRGWVTVLSPSGALRIHYCPECMEDLVRRATGSTHDGDAANADA*
Ga0062590_10238616113300004157SoilMLGAGPTVRVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0066395_1027198123300004633Tropical Forest SoilMDRGPTVEVMRCIECGSEKCEAQRGWVTVLSPSGSIRIHYCPDCMANLVSGSPVADEVDDHAKDE*
Ga0066673_1013122013300005175SoilVQVMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPDCMVDLVSRATAAEDTDDAADDV*
Ga0066684_1017467923300005179SoilVEVMRCVECGDRRCEADRGWVIVLSPSGARRIHYCPDCMAELISRSVVADEVDDYADDE*
Ga0065705_1042007723300005294Switchgrass RhizosphereMLCVECSREKDPDERGWVTVLSSSAALRIHYCPECMADLICRSSASEAVSDDGDA*
Ga0070683_10130079223300005329Corn RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0066388_10009190033300005332Tropical Forest SoilVEVMRCVECGSEKCEAQRGWVTVLSPSGSIRIHYCPDCMANLVSGSPVADEVDDHAKDE*
Ga0066388_10010918043300005332Tropical Forest SoilMRCVECGCDKVPDQRGWVTVLSPSGAIRIHYCPDCMVKLVDRANAVDEAGEPDPAGAG*
Ga0066388_10053477323300005332Tropical Forest SoilMRCVECGSERCDTQRGWVTVLTPSGSIRIHYCPGCMDKLVSRSPVADEVDDRTDDQ*
Ga0066388_10646330113300005332Tropical Forest SoilVETMRCVECGGEKRIAQRGWVTVLSPSGSRRIHYCPDCMAELVSRPVVADEVDDHAEDE*
Ga0066388_10682673513300005332Tropical Forest SoilVEVMRCVECGSQKCEAQRGWVTVLSPSGALRIHYCPDCMANLVSRSAVANDVDDHAKDE*
Ga0068868_10064718413300005338Miscanthus RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE*
Ga0066682_1071813323300005450SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATA
Ga0070707_10000805833300005468Corn, Switchgrass And Miscanthus RhizosphereVSGMRCVECGCQRDDAQRGWVTVLSPSGSRRIHYCPGCMANLVSRPTVADEADDYANDE*
Ga0073909_1006924223300005526Surface SoilMLGPGPTVRVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0070696_10102037223300005546Corn, Switchgrass And Miscanthus RhizosphereMLGPGPTVGVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0070693_10065501123300005547Corn, Switchgrass And Miscanthus RhizosphereMLGPGPTVGVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE*
Ga0068856_10068261113300005614Corn RhizosphereGMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0066903_10002504723300005764Tropical Forest SoilMRCVECGSQKRDSERGWVTVLSPAGALRIHYCPGCMANLVSRSPVADEVDDYAKDE*
Ga0066903_10011388043300005764Tropical Forest SoilMRCVECAREKLPEERGWVTVLSPSGAMRIHYCADCMIELVHRATAVDDETEVDDADGA*
Ga0066903_10029850623300005764Tropical Forest SoilMRCVECGSERDPSQRGWVTVLSPSGSLRVHYCPNCMSELVTRSTAAAEADAKDDD*
Ga0066903_10109941823300005764Tropical Forest SoilVGVMQCVECGSERDPSERGWVTVLSPQALRIHYCPDCMSELVTHTTAEAEVDEPAEDE*
Ga0066903_10166161023300005764Tropical Forest SoilVEVMRCVECGSERDPSERGWVTVLSPSGSLRIHYCPNCMSELVTSSTAAAEADAKDDD*
Ga0066903_10192409923300005764Tropical Forest SoilVSGMRCVECGCQKSDTERGWVTVLAPSGAHRAHYCPGCMAALVSRPAVADEVDAPADDE*
Ga0066903_10200988323300005764Tropical Forest SoilVEVMRCVECGSQKCPDQRGWVTVLSPSGARRVHYCPDCMASLVARPVAAHEVDDHAKDD*
Ga0066903_10384612323300005764Tropical Forest SoilVEVMRCVECGSERDPSERGWVTVLSPSGSLRIHYCPNCMSELVTRSPAAADADAKDD*
Ga0066903_10521479923300005764Tropical Forest SoilGPTVAVMQCVECGSERCESQRGWVTVLSPSGSIRVHYCPDCMAELCSHSAVADEGDTTTDDE*
Ga0066903_10698675213300005764Tropical Forest SoilVEVMRCVECGSERDPSERGWVTVLSPSGSLRIHYCPNCMAELVTRSPAAADADAKDD*
Ga0066903_10820686823300005764Tropical Forest SoilVKVMRCVECGCERDPSERGWVTVLSPSGSLRIHYCPNCMSELVTRSPAAADADAKDD*
Ga0068860_10061572133300005843Switchgrass RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDG
Ga0070717_1004528733300006028Corn, Switchgrass And Miscanthus RhizosphereMRCVECAVEKDPEERGWVTVLSPSGAVRIHYCPSCIANLVQRANAVEDADSA*
Ga0066651_1033221013300006031SoilMRCGECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDAADDV*
Ga0066652_10178578513300006046SoilTVQVMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDAADDV
Ga0070716_10064751223300006173Corn, Switchgrass And Miscanthus RhizosphereVQVMRCVECSCEKDPDQRGWVTVLSPSGALRIHYCPSCMVDLVSRATAVEETDDTADDV*
Ga0070712_10053413523300006175Corn, Switchgrass And Miscanthus RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIHYCPSCMVDLVSRATAVEETDDTADDV*
Ga0079222_1015438923300006755Agricultural SoilVEAMRCVECGNERDPSERGWVTVLSPLSLRVHYCPDCMSALVSRTTPDAEVDEPAKDE*
Ga0066653_1010288223300006791SoilVPHDRIGPGPIVEVMRCVECGSERDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADAVVDYAEDE*
Ga0066653_1028667423300006791SoilVQVMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPSCMVNLVSRATAAEDVDDAADDV*
Ga0075426_1063911823300006903Populus RhizosphereMLGAGPTVRVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE*
Ga0111539_1048435833300009094Populus RhizosphereMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0105245_1029166233300009098Miscanthus RhizosphereMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE*
Ga0066709_10099137333300009137Grasslands SoilMRCVECGDRRCEADRGWVIVLSPSGARRIHYCPDCMAELISRSVVADEVDDYADDE*
Ga0066709_10162800923300009137Grasslands SoilMRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADEVVDYAEDE*
Ga0105242_1042684523300009176Miscanthus RhizosphereMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE*
Ga0105238_1054223123300009551Corn RhizosphereMLGPGPTVQIMRCVECGCEKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0105249_1039936233300009553Switchgrass RhizosphereMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE*
Ga0126373_1251809323300010048Tropical Forest SoilMRCVECAREKLPEERGWVTVLSPSGAMRIHYCADCMIELVQRATAVEDDAEADDVDDA*
Ga0127503_1029170023300010154SoilMRCVECGCEKEPEKRGWVTVLSPSGAVRIHYCPDCMVKLVQRANAVDDEADSPDAAGTS*
Ga0134080_1054131713300010333Grasslands SoilMRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADELVDYAEDE*
Ga0126370_1076749423300010358Tropical Forest SoilMRCIECGSEKCEAQRGWVTVLSPSGSIRIHYCPDCMANLVSGSPVADEVDDHAKDE*
Ga0126370_1116597223300010358Tropical Forest SoilMQCVECGSERDPSERGWVTVLSPPALRVHYCPDCMSELVARTTPGAEVDDPPEDE*
Ga0126376_1061044323300010359Tropical Forest SoilMRCVECGCERSDDQRGWVTVLSPSGSLRIHYCPDCMANLVSPSAVADKADEYAEDE*
Ga0126372_1004491343300010360Tropical Forest SoilMRCVECGSEKCEAQRGWVTVLSPSGSIRIHYCPDCMANLVSGSPVADEVDDHAKDE*
Ga0126378_1153358523300010361Tropical Forest SoilMRCVECGSQKCPDQRGWVTVLSPSGARRVHYCPECMASLVARPVAAHEVDDHAKDD*
Ga0134066_1006609123300010364Grasslands SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDAADDV*
Ga0126379_1155884113300010366Tropical Forest SoilMRCVECGSEKSDAQRGWVTVLSPSGSIRIHYCPDCMANLVSRSTTAQDVD
Ga0126379_1270232423300010366Tropical Forest SoilMRCVECGSQKCPDQRGWVTVLSPSGARRVHYCPDCMASLVARPVAAHEVDDHAKDD*
Ga0134125_1102108323300010371Terrestrial SoilMRCVECGSLKDLEQRGWVTVLSPSGALRIHYCPDCMSDLVSRSTTAAQVDDYAEDE*
Ga0134126_1291237323300010396Terrestrial SoilMRCVECGREKAPDERGWMTVLSPSGSLRIHYCPACVADLVRRADAIADPDDDA*
Ga0134123_1070714533300010403Terrestrial SoilMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVS
Ga0137381_1084507823300012207Vadose Zone SoilMRCVECGSQKRADQRGWVTVLSPSGTLRIHYCPDCMANLVSRSTVANEVDDYANDE*
Ga0137379_1011392523300012209Vadose Zone SoilMRCVECGSQKRADQRGWVTVLSPSGTLRIHYCPDCMANLVSRSTVTNEVDDYANDE*
Ga0137370_1003142923300012285Vadose Zone SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDADDTAEDV*
Ga0157299_1009476723300012899SoilMRCVECGREKDPEQRGWVTVLSPSGALRIHYCPGCMTDLVSRATAVEGNDAAGDV*
Ga0126375_1173159823300012948Tropical Forest SoilMRCVECGCEKSDDQRGWVTVLSPSGSLRIHYCPNCMANLVSPSAVADKAD
Ga0164298_1089718023300012955SoilMRCVECGRVKDLEERGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDD
Ga0164301_1126896623300012960SoilTRREAQGRRTVVGMRCVECSRGKDPDERGWVTVLSPSGALRIHYCPECMVDLVARATAADDDA*
Ga0134087_1054424923300012977Grasslands SoilMRCVECGRQKDPDQRGWVTVLSPSGALRIRYCPDCMTDLVSRSTTADEVDDYAEDE*
Ga0164304_1149742923300012986SoilMRCVECGREKDPEQRGWVTVLSPSGALRIHYCPSCMVDLVSRATAVEETDDTADDV*
Ga0164305_1192065213300012989SoilMRCVECGRVKDLEERGWVTVLSPSGALRIRYCPDCMSDLIARSSASDA
Ga0157380_1243960213300014326Switchgrass RhizosphereGMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIHYCPECMADLICRSSVSDAVSDDGDE*
Ga0157376_1202085923300014969Miscanthus RhizosphereMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPECMADLICRSSVSDAVSDDGDE*
Ga0134072_1024894823300015357Grasslands SoilMRCVECRCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDARDDV*
Ga0132258_1068458843300015371Arabidopsis RhizosphereMRCVECGSERDPSERGWVTVLSPPALRTHYCPDCMSELVKHTTADAEVDDP
Ga0187785_10001166113300017947Tropical PeatlandMRCVECGSERIPTQRGWVTVLSPSGSLRIHYCPECMAKLVARPTVADEVDDNAKD
Ga0066655_1081221923300018431Grasslands SoilMRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVWRSTTADEVVDYAEDE
Ga0066667_1096055813300018433Grasslands SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDA
Ga0066669_1066193423300018482Grasslands SoilVQVMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDAADDV
Ga0247794_1012361323300024055SoilAMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPGCMTDLVSRATAVEGNDTADDV
Ga0207646_10001553233300025922Corn, Switchgrass And Miscanthus RhizosphereMRCVECGCQRDDAQRGWVTVLSPSGSRRIHYCPGCMANLVSRPTVADEADDYANDE
Ga0207687_1004143843300025927Miscanthus RhizosphereMLGPGPTVGVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE
Ga0207690_1088087423300025932Corn RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLIARSSASDAVSDDGDE
Ga0207665_1080355123300025939Corn, Switchgrass And Miscanthus RhizosphereVQVMRCVECSCEKDPDQRGWVTVLSPSGALRIHYCPSCMVDLVSRATAVEETDDTADDV
Ga0207661_1041449823300025944Corn RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE
Ga0207712_1042234013300025961Switchgrass RhizosphereMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE
Ga0207639_1212931113300026041Corn RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDA
Ga0207678_1164805723300026067Corn RhizosphereGPGPTVQIMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPECMADLICRSSVSDAVSDDGDE
Ga0207676_1087088413300026095Switchgrass RhizosphereMLCPGPTVPVMRCVECGRVKDPDQRGWVTVLSPSGALRIRYCPDCMSDLICR
Ga0209027_102234443300026300Grasslands SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPNCMVDLVSRATAAEDTDDAADDV
Ga0209265_104994123300026308SoilMRCVECGSEKDPDQRGWVTVLSPSGALRIHYCPDCMADLVSRSTTADEVVDYAEDE
Ga0209473_118577013300026330SoilTVEVMRYVECGDRRCEADRGWVIVLSPSGARRIHYCPDCMAELISRSVVADEVDDYADDE
Ga0209473_120816423300026330SoilVEVMRCVECGDRRCEADRGWVIVLSPSGARRIHYCPDCMAELISRSVVADAV
Ga0209807_121901523300026530SoilMRCVECGDRRCEADRGWVIVLSPSGARRIHYCPDCMAELISRSVVADEVDDYADDE
Ga0209811_1024152323300027821Surface SoilMLGPEPTVRVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE
Ga0209465_1019777623300027874Tropical Forest SoilMRCIECGSEKCEAQRGWVTVLSPSGSIRIHYCPDCMANLVSGSPVADEVDDHAKDE
Ga0207428_1053013613300027907Populus RhizosphereMLGAGPTVRVMRCVECGREKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSSASDAVSDDGDE
Ga0307495_1003953513300031199SoilRVMRCVECGRVKDPEQRGWVTVLSPSGALRIRYCPDCMSDLICRSTASDAVSDDGDE
Ga0307469_1132960513300031720Hardwood Forest SoilMRCVECGCEKEPEQRGWVTVLSPSGAIRIHYCPACMVELVERANTVD
Ga0318493_1079404823300031723SoilMRCVECGGEKVPEQRGWVTVLSPSGAIRIHYCPDCMVQLVARANAVDEEAGEPDPAGAG
Ga0308174_1000103833300031939SoilMRCVECGRLKALDERGWVTVMSPSGQLRIRYCPECVADLVFRASTADAVDDYSDDA
Ga0308174_1104752823300031939SoilMRCVECAREKTPDERGWLTVLSPSGSLRIHYCPACVADLVRRADAIADRDDA
Ga0308176_1005198443300031996SoilMRCVECGCEKDPDQRGWVTVLSPSGALRIHYCPSCMVNLVSRATAAEDVDDAADDV
Ga0308176_1234499813300031996SoilMRCVECGRLKALDERGWVTVMSPSGQLRIRYCPECVADLVFRASTADAVDDYSDD
Ga0308173_1038494423300032074SoilMRCVECGSLKDLEQRGWVTVLSPSGALRIHYCPDCMSDLVSRSTTAAQVDDYAEDE
Ga0307472_10073058523300032205Hardwood Forest SoilMRCVECGSQKTDPSERGWVTVLSPSGALRIHYCPGCMSDLVSRSKTAEHVDDYAEDQ
Ga0318519_1101389123300033290SoilMRCVECGGHKCEDERGWVTVLSPSGTIRVHYCPACMAELVSRTVVSDEADENT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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