Metagenome / Metatranscriptome Family F087730

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087730
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	118 residues
Representative Sequence	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTVDVTDTPKKA
Number of Associated Samples	79
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.27 %
% of genes near scaffold ends (potentially truncated)	38.18 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (33.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (30.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.59% β-sheet: 0.00% Coil/Unstructured: 40.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07228	SpoIIE	30.91
PF13185	GAF_2	5.45
PF04545	Sigma70_r4	2.73
PF13581	HATPase_c_2	2.73
PF05532	CsbD	0.91
PF13466	STAS_2	0.91
PF14518	Haem_oxygenas_2	0.91
PF00571	CBS	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	98.18 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	98.18 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.36 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	73.64 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	4.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.64 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	4.55 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.64 %
Glycomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces	4.55 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.64 %
Glycomyces tenuis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces tenuis	2.73 %
Glycomyces arizonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	1.82 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	73.64 %
Glycomyces tenuis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces tenuis	2.73 %
Glycomyces arizonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	1.82 %
Rhodococcus sp. AW25M09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. AW25M09	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2409004	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300000858\|JGI10213J12805_10089801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	917	Open in IMG/M
3300000891\|JGI10214J12806_11018069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300003203\|JGI25406J46586_10053744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300004156\|Ga0062589_100483689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300004157\|Ga0062590_101229791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300004463\|Ga0063356_100141477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2720	Open in IMG/M
3300004463\|Ga0063356_102200968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300004480\|Ga0062592_101149993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300005332\|Ga0066388_104274099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	728	Open in IMG/M
3300005467\|Ga0070706_102176270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces tenuis	501	Open in IMG/M
3300005536\|Ga0070697_100957209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300005937\|Ga0081455_10536064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300005981\|Ga0081538_10379025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. AW25M09	510	Open in IMG/M
3300006049\|Ga0075417_10362728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300006058\|Ga0075432_10158597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300006169\|Ga0082029_1057121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300006169\|Ga0082029_1103556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces arizonensis	656	Open in IMG/M
3300006618\|Ga0101566_11594953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300006844\|Ga0075428_100023610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6808	Open in IMG/M
3300006847\|Ga0075431_101382085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces tenuis	664	Open in IMG/M
3300006880\|Ga0075429_101261738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300006894\|Ga0079215_10949283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300006918\|Ga0079216_10416261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300007004\|Ga0079218_10575289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae → Glycomyces → Glycomyces tenuis	1020	Open in IMG/M
3300007004\|Ga0079218_11153710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300009100\|Ga0075418_10178092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2264	Open in IMG/M
3300009147\|Ga0114129_10003088	All Organisms → cellular organisms → Bacteria	23372	Open in IMG/M
3300009147\|Ga0114129_10009387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13946	Open in IMG/M
3300009147\|Ga0114129_10022983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8846	Open in IMG/M
3300009811\|Ga0105084_1039226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300009837\|Ga0105058_1021693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300010039\|Ga0126309_10425917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300010041\|Ga0126312_10702143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300010145\|Ga0126321_1270124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2490	Open in IMG/M
3300011003\|Ga0138514_100023291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300012358\|Ga0137368_10135580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1840	Open in IMG/M
3300012938\|Ga0162651_100025646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300015077\|Ga0173483_10762921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300017965\|Ga0190266_10456999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300017997\|Ga0184610_1028212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1558	Open in IMG/M
3300018027\|Ga0184605_10004210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5074	Open in IMG/M
3300018027\|Ga0184605_10239710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300018054\|Ga0184621_10247197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300018061\|Ga0184619_10002962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6208	Open in IMG/M
3300018075\|Ga0184632_10027689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2414	Open in IMG/M
3300018075\|Ga0184632_10061705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1626	Open in IMG/M
3300018076\|Ga0184609_10220175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300018422\|Ga0190265_10042262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3903	Open in IMG/M
3300018422\|Ga0190265_10968684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	972	Open in IMG/M
3300018422\|Ga0190265_11693244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300018422\|Ga0190265_13198118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300018429\|Ga0190272_10451035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300018466\|Ga0190268_10094423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1367	Open in IMG/M
3300018469\|Ga0190270_10547375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1115	Open in IMG/M
3300018469\|Ga0190270_10908024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300018469\|Ga0190270_10918266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300018481\|Ga0190271_10793870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1071	Open in IMG/M
3300019233\|Ga0184645_1128162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300019233\|Ga0184645_1145403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1015	Open in IMG/M
3300019254\|Ga0184641_1185514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300019377\|Ga0190264_10008278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2950	Open in IMG/M
3300019377\|Ga0190264_11469698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300019767\|Ga0190267_11136813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300019884\|Ga0193741_1016991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1874	Open in IMG/M
3300022195\|Ga0222625_1214487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300022195\|Ga0222625_1398869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300022195\|Ga0222625_1786902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300022694\|Ga0222623_10089118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M
3300022694\|Ga0222623_10128084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300025908\|Ga0207643_10312642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300026535\|Ga0256867_10338278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300027577\|Ga0209874_1039007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1272	Open in IMG/M
3300027907\|Ga0207428_10032942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4260	Open in IMG/M
3300028710\|Ga0307322_10102659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300028722\|Ga0307319_10023211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1903	Open in IMG/M
3300028744\|Ga0307318_10090481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1031	Open in IMG/M
3300028796\|Ga0307287_10078683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1235	Open in IMG/M
3300028814\|Ga0307302_10008200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4674	Open in IMG/M
3300028819\|Ga0307296_10462272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300028881\|Ga0307277_10486821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300028884\|Ga0307308_10626560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300030006\|Ga0299907_10000775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16680	Open in IMG/M
3300030006\|Ga0299907_10180101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1747	Open in IMG/M
3300030006\|Ga0299907_10337611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300030006\|Ga0299907_10629752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300030006\|Ga0299907_11010276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300030785\|Ga0102757_10061093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300030785\|Ga0102757_11481944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1330	Open in IMG/M
3300030829\|Ga0308203_1084963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300030902\|Ga0308202_1029488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300030903\|Ga0308206_1001114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2546	Open in IMG/M
3300030903\|Ga0308206_1011517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300030903\|Ga0308206_1019569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1128	Open in IMG/M
3300030903\|Ga0308206_1021692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300030903\|Ga0308206_1109215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031039\|Ga0102760_10032780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300031039\|Ga0102760_10045670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300031039\|Ga0102760_10822365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031054\|Ga0102746_10030148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031092\|Ga0308204_10022201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300031092\|Ga0308204_10122384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300031092\|Ga0308204_10223735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300031731\|Ga0307405_10988764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300031911\|Ga0307412_10630282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300031965\|Ga0326597_10964939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300031965\|Ga0326597_11828480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300032075\|Ga0310890_11576571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300032126\|Ga0307415_102052419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300033407\|Ga0214472_11591077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.73%
Host-Associated	Host-Associated	17.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.27%
Plants	Host-Associated → Plants	17.27%
Aquatic	Environmental → Aquatic	15.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.82%
Sediment	Environmental → Aquatic → Sediment	9.09%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.82%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.09%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Loam	Environmental → Terrestrial → Soil → Loam	2.73%
Sand	Environmental → Terrestrial → Soil → Sand	2.73%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	39.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.09%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.27%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006618	Soil microbial communities from the Leymus chinensis steppe, China - without N addition	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24090045	3300000033	Soil	MRQPATVHEAKSMVKERLLDRRVEKLSKENDRLRDAVGELRQDLDDAQDRSKETLAALSKKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQLKGWARSLTPENGNGSTVTGTSTGTDLTGKA*
JGI10213J12805_100898013	3300000858	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGDGTTVEVTDTPKKA*
JGI10214J12806_110180691	3300000891	Soil	SMVKERWLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRIKWLVLAGGAYVLGAKAGRGRYEQLKGWARSIAPQGENGTTGNGTEASSKV*
JGI25406J46586_100537442	3300003203	Tabebuia Heterophylla Rhizosphere	MKVKQPATMREAGSMLKERWLDRRVDKLAHENDELKERVEELRHDLDAEQDRRKETLDALSKARRPGRLKWLVLAGGAYVMGAKAGRARYEQMRTWARSMTQRDTDREIGGTTTTTPTTPTA*
Ga0062589_1004836892	3300004156	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVT
Ga0062590_1012297911	3300004157	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLSRENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSTTT
Ga0063356_1001414775	3300004463	Arabidopsis Thaliana Rhizosphere	MKQPTTVKEAKSMVKERWLDHRVEKLSRENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTRSNENGTTTVDVIDTPPKA*
Ga0063356_1022009681	3300004463	Arabidopsis Thaliana Rhizosphere	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTSTVDVVTDPPTKA
Ga0062592_1011499932	3300004480	Soil	MRQPATMHEARSMVKERWLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAVLSKTRRPGRIKWLVLAGGAYVLGAKAGRGRYEQLKGWARSIAPQGENGTTGNGTEASSKV*
Ga0066388_1042740991	3300005332	Tropical Forest Soil	MKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETLVALSKSRRRPGRVKWLVLAGGAYVMGAKAGRARYDQIRDWARSITQRDGDGAAAPRIGASTSMTETPSTKI*
Ga0070706_1021762701	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTEPPTKA*
Ga0070697_1009572092	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTDPPAKA
Ga0081455_105360641	3300005937	Tabebuia Heterophylla Rhizosphere	MKQPTAMREAKSMVKERWLDRRLEKLTHQNDELRDEVDELRHDLDEERDRSKETLTALSKSRRRPGRIKWLVLAGGAYVMGAKAGRARYDQIRDWARSITERDGESNGAVGSSTGTSGMEAPTTKV*
Ga0081538_103790251	3300005981	Tabebuia Heterophylla Rhizosphere	MKQPTKVREAKSMVKERWLDHRIEKLSRENDSLRGEVDELRHDLDETRDRSADTIKALARARRPGRMKWLVLAGGAYVLGAKAGRARYEQIRSWARSVMPGDGNGQAMDTQQVPTSSELPGTSLTP*
Ga0075417_103627282	3300006049	Populus Rhizosphere	MKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPG
Ga0075432_101585972	3300006058	Populus Rhizosphere	MKQPNTMREAKSVVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPGTMTGTSVSEAPGTKI*
Ga0082029_10571211	3300006169	Termite Nest	MKVKQPTSVREAGTMLKDRWLDRRVEKLSQENDKLRDELDELRHDLDSEQDRSKETLQALLKARRPGRIKWILLAGGAYVMGTKAGRARYEQMRGWVRSMSRPSGETEIAGTTKPM*
Ga0082029_11035561	3300006169	Termite Nest	MKQPTKVKEAKSMVKERWLDHRLEKLSRENDDLRGEVDELRHDLDETRDRSADTIKTLARSRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRDWARSMVPGNGNGHAPQGPETDSTSTELPGTSLTP*
Ga0101566_115949532	3300006618	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLSRENDELRDAVDELRVDLDEAEGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARS
Ga0075428_10002361010	3300006844	Populus Rhizosphere	MKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPGTMTGTSVSEAPGTKI*
Ga0075431_1013820851	3300006847	Populus Rhizosphere	MRQPATMHEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDDAQDRSKETLAALTKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSLTPDNGNGTTTTELSTGPDLPSKA*
Ga0075429_1012617381	3300006880	Populus Rhizosphere	MRQPATMHEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDDAQDRSKETLAALTKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSL
Ga0079215_109492831	3300006894	Agricultural Soil	EGSAVKQPTTVKEAKSMVKERWLDHRVEKLAKENDQLREAVEELREDLDDAQGRSEDTLKALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGNGDGTVIDTTTGTTKATDTKGPTGKA*
Ga0079216_104162612	3300006918	Agricultural Soil	MRQPATMQEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDEAQDRSKETLAALSKKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSLAPENGNGTTATQVSTGPDLPSKA*
Ga0079218_105752891	3300007004	Agricultural Soil	MRQPATMQEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDEAQDRSKETLAALSKKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSLAPENGNGTTATQVSTGPDLPSKA
Ga0079218_111537101	3300007004	Agricultural Soil	MQMKQPTTVREAKSMVKERWLDRRVEKLSKENDELREAVDELRRDLDEEHGRSKETLQALSKSKRPGRMKWLVLAGGAYVLGAKAGRARYEQIKGWTRSVTRSNGNGTATDMTTDTSGTSTGV*
Ga0075418_101780922	3300009100	Populus Rhizosphere	MHEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDDAQDRSKETLAALTKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSLTPDNGNGTTTTELSTGPDLPSKA*
Ga0114129_1000308812	3300009147	Populus Rhizosphere	MRDAKSMVKERWLDRRVEKLSEENDKLRDAVEDLRHELDAEHDRSKETLGALSKSRRRPGRMKWLVLAGGAYVLGAKAGRARYEQMKGWARSVTQQGSMGESNGGTTLPTTTTTPSSRSDV*
Ga0114129_100093876	3300009147	Populus Rhizosphere	MKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPGTMTGTSVSQAPGTKI*
Ga0114129_1002298311	3300009147	Populus Rhizosphere	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRIKWLMLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSTTTMDVPETPIKP
Ga0105084_10392261	3300009811	Groundwater Sand	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGTTTVDVVTDPPTKA*
Ga0105058_10216931	3300009837	Groundwater Sand	MKQPTTMREAKSMVKDRWLDRRVEKLTKENDELREAVDELRHDLEEEHGRTKETLKALSKSKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIKGWTRSVTQRSGNGASGPSTTSSDAKGLSTEA*
Ga0126309_104259172	3300010039	Serpentine Soil	MKQPTAVKDAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQLAGWARSMTKPNGNGTPVDVTDTPKNA*
Ga0126312_107021432	3300010041	Serpentine Soil	MKMKQPTSVREAGSMLKERWLDRRVEKLADENDKLRVELDELRHDLDAEQDRSKETLQALSKVRRPGRMKWIVLAGGAYVMGTKAGRARYEQMRTWVRSVTRSDGETPVSGTTPPM*
Ga0126321_12701241	3300010145	Soil	IGVMTSQYPDLGGRSPMKMKQPSPVREAGTMLKDRWLDRRVEKLSQENDKLRDELDELRHDLDSEQDRSKETLQALSKARRPGRIKWILLAGGAYVIGTKAGRARYEQMRTWVRSMSRPSGETEIAGTTKPM*
Ga0138514_1000232911	3300011003	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKHRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGISVDVTDTPKKA*
Ga0137368_101355802	3300012358	Vadose Zone Soil	MKQPTTVREAKSMVKERWLDRRMEKLSQENDKLREAVEELRHDLDTEQDRSKETLNALSKTRRPGRMKWLVLAGGAYVLGTKAGRARYEQMRGWVRSVTESNGSNGGTTASPADAAPTIES*
Ga0162651_1000256461	3300012938	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTLDVTETPKKA*
Ga0173483_107629212	3300015077	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLSRENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSTTTT
Ga0190266_104569991	3300017965	Soil	MKQPATMQEAKSMMKERWLDRRVDKLSKENDKLREAVGELRLDLDEAQGRSKETLAALSKTRRPGRLKWIVLAGGAYVLGAKAGRARYEQLRTWARSLAPQNGDG
Ga0184610_10282123	3300017997	Groundwater Sediment	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELREAVDELREDLDEAHGRSQETLAALSKSSRRPGRMKWLVLAGGAYVLGTKAGRARYEQITGWARSLTQPNGNGSTVDVTDTPKKA
Ga0184605_100042107	3300018027	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVERLSKENDELREAVDELREDLDEAQGRSKETLAALSKNRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVSKPNGNGTTVDVTDTPTKA
Ga0184605_102397103	3300018027	Groundwater Sediment	EAKSMVKERWLDHRVERLSKENDELREAVDELRDDLDEAEGRSKETLAALSKNRRPGRMKWLVLAGGAYVLGAKAGRARYEQITGWARSVTQPNGNGTTADATDTPTKA
Ga0184621_102471971	3300018054	Groundwater Sediment	MKQPTTVKEATSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPNGNGTTTVDVVTDGPTKA
Ga0184619_1000296210	3300018061	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDELREAVDELREDLDEAQGRSKETLAALSKNRRPGRMKWLVLAGGAYVLGAKAGRARYEQITGWARSVTQPNGNGTTADATDTPTKA
Ga0184632_100276895	3300018075	Groundwater Sediment	MKQATAVREAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPNGNGTTTVDVVTDGPTKA
Ga0184632_100617052	3300018075	Groundwater Sediment	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTVDVTDTPKKA
Ga0184609_102201752	3300018076	Groundwater Sediment	MKQPTTTVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALAKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVSKPNGNGTTVDVTDTTK
Ga0190265_100422629	3300018422	Soil	MKQPTTVREAKSMVKERWLDHRVEKLAKENDELREAVDELREDLDEAQGRSKETLAALSKTKRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGNGTVTDPTTDVTGKG
Ga0190265_109686841	3300018422	Soil	MRQPATMHEARSMVKERWLDRRVDKLSKENDKLREAVGELRLDLDEAQGRSKETLAALSKTRRPGRIKWLVLAGGAYVLGAKAGRARYEQLKGWARSITPQGENGTTGNGTEASSQV
Ga0190265_116932441	3300018422	Soil	RQGWVRLLRRLDPEEGPQMRQPATMHEAKSMVKERLMDRRIDKLTKENDKLREAVGELREDLDDAQGRSKETLAALSKTRRPGRLKWLVLAGGAYVLGAKAGRARYDQLREWARSVVPQNGKGSATEGTDLTSQA
Ga0190265_131981181	3300018422	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLAKENDELRDAVDELREDLDEAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGNGTVTDPTTDVTGKG
Ga0190272_104510352	3300018429	Soil	MKQPTKVKEAKSMVKERWLDHRVEKLAKENDELREAVDELREDLDEAQGRSKETLAAFSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGNGTALDTTDVADKA
Ga0190268_100944233	3300018466	Soil	MRQPATMHEAKSMVKERLLDRRVEKLSKENDRLRDAVGELRQDLDDAQDRSKETLAALSKKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQLKGWARSLTPENGNGSTATGVSTGPDLPSKA
Ga0190270_105473751	3300018469	Soil	MRQSATMHEAKSMVKERLLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRLKWIVLAGGAYVLGAKAGRARYEQLKGWARSLAPENGNGHTTTDGGTDPIAKL
Ga0190270_109080242	3300018469	Soil	MRQPTTMHEAKSMVKERLLDRRVDKLSKENDKLREAVGELRQDLDEEQGRSKETLAALSRTRRPGRMKWIVLAGGAYVLGAKAGRGRYEQLKGWARSLAPENSNGHTTTDDGTDPIAKI
Ga0190270_109182663	3300018469	Soil	DRRVDKLSRENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRMKWIVLAGGAYVLGAKAGRGRYEQLKGWARSLAPENGNGHTTIDTTTDSGTDPIAKL
Ga0190271_107938702	3300018481	Soil	MRQSATMHEAKSMVKERLLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRMKWIVLAGGAYVLGAKAGRGRYEQLKVWARSLAPENGNGHTT
Ga0184645_11281621	3300019233	Groundwater Sediment	MKQPTTTVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALAKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPN
Ga0184645_11454031	3300019233	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDELREAVDELREDLDEAHGRSQETLAALSKSSRRPGRMKWLVLAGGAYVLGTKAGRARYEQITGWARSLTQPNGNGSTVDVTDTPKKA
Ga0184641_11855142	3300019254	Groundwater Sediment	VKEAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGSTMDVTDTPKKA
Ga0190264_100082782	3300019377	Soil	MRQPATMHEAKSMVKERLLDRRVEKLSKENDRLRDAVGELRQDLDEAQDRSKETLAALSKKTRRPSRMKWLVLAGGAYVLGAKAGRARYEQLKGWARSLTPENGNGSTATGTSTGTDLTGKA
Ga0190264_114696981	3300019377	Soil	MRQPATMHEAKSMVKERFLDRRVEKLSKENDKLREAVGELRQDLDEAQDRSKETLAALSKKTRRPGRMKWLVLAGGAYVLGAKAGRGRYEQLKGWARSLTPENGNGTTATGVSTGPDLPSKA
Ga0190267_111368131	3300019767	Soil	MKQPTTVREAKSMVKERWLDHRVEKLAKENDDLREAVEELREDLDQAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGNGTTTGTGPATDVTGKA
Ga0193741_10169912	3300019884	Soil	MRQPATVHEARTMVKERWLDRRVEKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRVKWLVLAGGAYVLGAKAGRARYEQLKDWARSLAPEGGNGTAGNGTTEPSSRA
Ga0222625_12144871	3300022195	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDELREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIASWARSVGKSNGNGTAVDVTDTPNIT
Ga0222625_13988691	3300022195	Groundwater Sediment	TVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLVALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTVDVTDSPPKA
Ga0222625_17869021	3300022195	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLREAVEGLREDLDDAQGRSKETLAALSKNKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTDPPTKA
Ga0222623_100891182	3300022694	Groundwater Sediment	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDELREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIASWARSVGKS
Ga0222623_101280841	3300022694	Groundwater Sediment	MKQPTTTVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALAKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPNGNGTTTVDVVTDGPTK
Ga0207643_103126422	3300025908	Miscanthus Rhizosphere	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTDPPAKA
Ga0256867_103382781	3300026535	Soil	DHRVEKLAKENDQLREAVEELREDLDDAQGRSQDTLKALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGIVTDTTMGTTNATDTKGTTGKA
Ga0209874_10390072	3300027577	Groundwater Sand	MKQPTTMREAKSMVKDRWLDRRVEKLTKENDELREAVDELRHDLEEEHGRTKETLKALSKSKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIKGWTRSVTQPNGDGASGPSTTSSDAKDLSTDA
Ga0207428_100329422	3300027907	Populus Rhizosphere	MKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPGTMTGTSVSEAPGTKI
Ga0307322_101026591	3300028710	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLREAVEGLREDLDDAQGRSKETLAALSKNKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTDPP
Ga0307319_100232111	3300028722	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTK
Ga0307318_100904812	3300028744	Soil	MKQPTAVKEAKSMVKERWLDHRVEKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTVDVTTDTPKKA
Ga0307287_100786832	3300028796	Soil	MKQPTAVKEATSMVKERWLDHRVEKLSKENAELREAVDELRVYLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIASWARSVGKPNGNGTAVDVTDTPNMA
Ga0307302_100082002	3300028814	Soil	MKQPTAVKEATSMVKERWLDHRVEKLSKENAELREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIASWARSVGKPNGNGTAVDVTDTPNIT
Ga0307296_104622722	3300028819	Soil	MKQPTNVKEAKSMVKERWLDHRVEKLSKENDDLREAVEGLREDLDDAQGRSKETLAALSKNKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGT
Ga0307277_104868211	3300028881	Soil	MKQPTTTVKEAKSMVKERWLDHRVEKLSKENDELRDAVDELRVDLDEAQGRSKETLAALAKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPNGNGTTTV
Ga0307308_106265601	3300028884	Soil	RDLHMKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLREAVEGLREDLDDAQGRSKETLAALSKNKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKPNGNGTTTVDVVTDPPTKA
Ga0299907_100007759	3300030006	Soil	MRQPATMHEARSMVKERWLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTHRPGRVKWLVLAGGAYVLGAKAGRARYEQLKGWARSLAPQGGNGTAGNGAEPSSQV
Ga0299907_101801011	3300030006	Soil	MKQPTTVREVKSMVKERWLDRRVEKLSKENDELREAVEELRRDLDEEHGRSKETLQALSKSKRPGRMKWLVLAGGAYVLGAKAGRARYEQIKGWTRS
Ga0299907_103376113	3300030006	Soil	MVKERWLDHRVEKLAKENDQLREAVEELREDLDDAQGRSQDTLKALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGIVTDTTMGTTNATDTKGTTGKA
Ga0299907_106297521	3300030006	Soil	MRQPATVHEARSMVKERWLDHRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQLKGWARSISPQGGNGTAGNGAEPSSQV
Ga0299907_110102761	3300030006	Soil	HEAKSMVKERLLDRRVDKLSKENERLREAVGELREDLDEAQGRSKETLAALSKTRRPGRMKWIVLAGGAYVLGAKAGRARYEQLKGWARSLTPQSDNGSTTTTTGTGTEVTGKA
Ga0102757_100610931	3300030785	Soil	KSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRIKWLMLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSSTTMDLPDTPIKP
Ga0102757_114819444	3300030785	Soil	MKQPTTVREAKSMVKERWLDHRVEKLAKENDDLREAVEELREDLDQAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGNGTATGSGPTTDVTGKA
Ga0308203_10849631	3300030829	Soil	RRRDLQMKQPTTVKEAKSMVKERWLDHRVEKLSKENDELREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIASWARSVGKSNGNGTAVDVTDTPNIT
Ga0308202_10294881	3300030902	Soil	MKQPTTVKEAKSMVKERWLDHRVEKLSKENDDLREAVEGLREDLDDAQGRSKETLAALSKNKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSMTKPNGNGTTTVDVVTDPPTKA
Ga0308206_10011146	3300030903	Soil	RELQMRQPATMQEAKSMVKERWLDRRLDKLSKENEKLREAVGELRQDLDDEQGRSKETLTALSRTRRPGRMKWIVLAGGAYVLGAKAGRARYEQLKSWARSLTPENGNGATPTTTDIGTDMTGPEMTRKA
Ga0308206_10115174	3300030903	Soil	MKQPTTVKEAKSMVKERWLDHRVDKLSKENDDLREAVDELRVDLDEAQGRSKETLAALSKNRRRPGRVKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTCPPDGLGSRWTGNGVERDADPQRHGIRS
Ga0308206_10195691	3300030903	Soil	MRQPATVHEARSMVKERLLDRRVDKLSKENDKLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRVKWLVLAGGAYVLGAKAGRARYEQLKGWARSIAPENGNGTAANGTDPSSQV
Ga0308206_10216921	3300030903	Soil	MKQPTTMREAKSMVKERWLDRRVEKLSDENDRLRDAVDELRHELDTEHDRSKETLDALSKNRRRPGRMKWLVLAGGAYVLGTKAGRARYEQMKGWVRSVTESNGSNGDAADVPASRPLKTDPKTDLKTDL
Ga0308206_11092152	3300030903	Soil	MKQPTTMREAKSMVKERWLDRRVDKLSKENDELREAVDELRRDLDEEHGRSKDTLEALSKSSRRPGRMKWLVLAGGAYVLGAKAGRARYEQLRDWARSVTQSNGHGTAMDTSTGASSAPKDVPKTEA
Ga0102760_100327802	3300031039	Soil	TTVKEAKSMVKERWLDHRVEKLSKENDDLRDAVDELRVDLDEAQGRSKETLAALSKNRRRPGRIKWLMLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSSTTMDLPDTPIKP
Ga0102760_100456701	3300031039	Soil	AEHVGAAGEHEPLHTTVKEAKSMVKERWLDHRVEKLSRENDELRDAVDELRVDLDEAEGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSTTTMDVPDTPTKP
Ga0102760_108223651	3300031039	Soil	EEGICRMKQPTTVREAKSMVKERWLDHRVEKLAKENDDLREAVEELREDLDQAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGNGTATGSGPTTDVTGKA
Ga0102746_100301481	3300031054	Soil	KSMVKERWLDHRVEKLAKENDDLREAVEELREDLDQAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQIRGWARSVTQQNGDGNGNGTATGSGPTTDVTGKA
Ga0308204_100222011	3300031092	Soil	MVKERWLDRRVDKLSKENDELREAVDELRRDLDEEHGRSKDTLEALSKSSRRPGRMKWLVLAGGAYVLGAKAGRARYEQLRDWARSITQSNGHGTAMDTSTGASSAPKDVPKTEA
Ga0308204_101223841	3300031092	Soil	RRELQMRQPATMQEAKSMVKERWLDRRLDKLSKENEKLREAVGELRQDLDDEQGRSKETLTALSRTRRPGRMKWIVLAGGAYVLGAKAGRARYEQLKSWARSLTPENGNGATPTTTDIGTDMTGPEMTRKA
Ga0308204_102237352	3300031092	Soil	GPMKQPTTVKEAKSMVKERWLDHRVEKLSRENDELRDAVDELRVDLDEAEGRSKETLAALSKNRRRPGRMKWLVLAGGAYVLGAKAGRARYEQIAGWARSVTKQNGNGSSTTMDLPDTPIKP
Ga0307405_109887642	3300031731	Rhizosphere	MKVKQPTTMREAGSMLKERWLDRRVDKLSQENDKLREELDELRHDLDAEQDRSKETLSALSKARKPGRMKWLLLAGGAYVMGTKAGRARYEQMRGWVRSMTARSEDDGRTEVTGTTGPM
Ga0307412_106302821	3300031911	Rhizosphere	VGREDPMKVKQPTTMREAGSMLKERWLDRRVDKLSQENDKLREELDELRHDLDAEQDRSKETLSALSKARKPGRMKWLLLAGGAYVMGTKAGRARYEQMRGWVRSMTARSEDDGRTEVTGTTGPM
Ga0326597_109649392	3300031965	Soil	MKQPATMHEARSMVKGRWLDRRVDKLAKENERLRAAVGDLRHDLDQAQGRSQETLDALSKTRRPGRMKWLILAGGAYVLGAKAGRARYEQLKGWARSVTERYAGHTAAGDRDVATSSRP
Ga0326597_118284802	3300031965	Soil	MRQPATVQEAKSMVKERLLDRRVDKLSKENERLREAVGELRQDLDEAQGRSKETLAALSKTRRPGRMKWLVLAGGAYVLGAKAGRARYEQLKGWARSVTRQDGDGTVADGTDLTRPA
Ga0310890_115765711	3300032075	Soil	VMKQPNTMREAKSMVKERWLDRRLEKLSQQNDELRDEVDTLRHDLDDERDRSKETMVALSKTRRRPGRLKWLVLAGGAYVMGAKAGRARYDQIRDWARSIAQRDGHGDVTPGTMTGTSVSEAPGTKI
Ga0307415_1020524192	3300032126	Rhizosphere	MKVKQPTTMREAGSMLKERWLDRRVDKLSQENDKLREELDELRHDLDAEQDRSKETLSALSKARKPGRMKWILLAGGAYVMGTKAGRARYEQMRGWVRSMTARSEDDGRTEVT
Ga0214472_115910771	3300033407	Soil	MKMRQPTTMKEATSMVKERLTDRRVEKLMRENDELREAVDELRHDLDEEQGRSKETLQALSKSKRRPGRMKWLVLAGGAYVLGAKAGRARYEQIKGWTRSVTRPNGDEASAPSTASKDTKEPPTEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087730

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences