Metagenome / Metatranscriptome Family F087737

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087737
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	38 residues
Representative Sequence	PKAFASLDLEIIQPSLLDKTTTGFFLILGLNNLSQET
Number of Associated Samples	94
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.89 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (28.182 % of family members)
Environment Ontology (ENVO)	Unclassified (67.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (77.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.69% β-sheet: 0.00% Coil/Unstructured: 52.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00717	Peptidase_S24	76.36
PF04828	GFA	8.18
PF04832	SOUL	3.64
PF02321	OEP	1.82
PF00485	PRK	1.82
PF02803	Thiolase_C	0.91
PF00497	SBP_bac_3	0.91
PF05193	Peptidase_M16_C	0.91
PF11127	DUF2892	0.91
PF00463	ICL	0.91
PF00378	ECH_1	0.91
PF00817	IMS	0.91
PF00905	Transpeptidase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	8.18
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	3.64
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.91
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.91
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
All Organisms	root	All Organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
cellular organisms	root	All Organisms → cellular organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.27 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.27 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	23.64 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	18.18 %
Pelagibacterales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis	5.45 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	18.18 %
Candidatus Fonsibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter	5.45 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	11.82 %
unclassified Candidatus Fonsibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → unclassified Candidatus Fonsibacter	2.73 %
Candidatus Fonsibacter ubiquis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → Candidatus Fonsibacter ubiquis	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	11.82 %
Candidatus Fonsibacter sp. PEL3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → unclassified Candidatus Fonsibacter → Candidatus Fonsibacter sp. PEL3	2.73 %
Candidatus Fonsibacter ubiquis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → Candidatus Fonsibacter ubiquis	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573025\|GS310G0146KB_1113212522872	Not Available	812	Open in IMG/M
3300000756\|JGI12421J11937_10057483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter	1227	Open in IMG/M
3300001974\|GOS2246_10112050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1427	Open in IMG/M
3300002033\|GOS24894_10132580	Not Available	1560	Open in IMG/M
3300002033\|GOS24894_10348070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1996	Open in IMG/M
3300002033\|GOS24894_10470032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1996	Open in IMG/M
3300005593\|Ga0066837_10299103	Not Available	564	Open in IMG/M
3300005948\|Ga0066380_10087086	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300005951\|Ga0066379_10249832	Not Available	576	Open in IMG/M
3300006013\|Ga0066382_10231803	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300006019\|Ga0066375_10158909	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300006166\|Ga0066836_10182673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1242	Open in IMG/M
3300006313\|Ga0068472_10336842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2769	Open in IMG/M
3300006313\|Ga0068472_10376170	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300006313\|Ga0068472_10379617	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300006313\|Ga0068472_10475757	Not Available	672	Open in IMG/M
3300006316\|Ga0068473_1735488	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300006323\|Ga0068497_1331961	Not Available	522	Open in IMG/M
3300006331\|Ga0068488_1324367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300006331\|Ga0068488_1434960	Not Available	819	Open in IMG/M
3300006338\|Ga0068482_1258814	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300006565\|Ga0100228_1089107	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006902\|Ga0066372_10348661	Not Available	846	Open in IMG/M
3300006902\|Ga0066372_10651263	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300007647\|Ga0102855_1195452	Not Available	540	Open in IMG/M
3300007670\|Ga0102862_1119899	Not Available	665	Open in IMG/M
3300008249\|Ga0105353_1125987	Not Available	607	Open in IMG/M
3300008253\|Ga0105349_10455348	Not Available	534	Open in IMG/M
3300009049\|Ga0102911_1103231	Not Available	816	Open in IMG/M
3300009054\|Ga0102826_1131508	Not Available	596	Open in IMG/M
3300009058\|Ga0102854_1030236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1561	Open in IMG/M
3300009077\|Ga0115552_1291010	Not Available	653	Open in IMG/M
3300009132\|Ga0118730_1148317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300009142\|Ga0102885_1010094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2175	Open in IMG/M
3300009155\|Ga0114968_10096917	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1809	Open in IMG/M
3300009172\|Ga0114995_10570179	Not Available	618	Open in IMG/M
3300009339\|Ga0117928_1153241	Not Available	745	Open in IMG/M
3300009425\|Ga0114997_10119249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1590	Open in IMG/M
3300009425\|Ga0114997_10297704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	894	Open in IMG/M
3300009438\|Ga0115559_1249388	Not Available	630	Open in IMG/M
3300009443\|Ga0115557_1362507	Not Available	538	Open in IMG/M
3300009472\|Ga0115554_1180505	Not Available	863	Open in IMG/M
3300009481\|Ga0114932_10221136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1148	Open in IMG/M
3300009481\|Ga0114932_10384375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300009481\|Ga0114932_10457004	Not Available	754	Open in IMG/M
3300009512\|Ga0115003_10049236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2674	Open in IMG/M
3300009703\|Ga0114933_10662912	Not Available	670	Open in IMG/M
3300009706\|Ga0115002_11178781	Not Available	519	Open in IMG/M
3300009785\|Ga0115001_10274781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1073	Open in IMG/M
3300009785\|Ga0115001_10573627	Not Available	691	Open in IMG/M
3300009785\|Ga0115001_10700865	Not Available	614	Open in IMG/M
3300009790\|Ga0115012_10441257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1007	Open in IMG/M
3300010883\|Ga0133547_11644746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1197	Open in IMG/M
3300011326\|Ga0138403_1146031	Not Available	517	Open in IMG/M
3300011330\|Ga0138383_1205037	Not Available	547	Open in IMG/M
3300012522\|Ga0129326_1177121	Not Available	543	Open in IMG/M
3300012919\|Ga0160422_11133333	Not Available	508	Open in IMG/M
3300012928\|Ga0163110_10927292	Not Available	691	Open in IMG/M
3300012935\|Ga0138257_1355919	Not Available	554	Open in IMG/M
3300012950\|Ga0163108_10767784	Not Available	623	Open in IMG/M
3300012952\|Ga0163180_11265231	Not Available	605	Open in IMG/M
3300012953\|Ga0163179_10910091	Not Available	761	Open in IMG/M
3300012967\|Ga0129343_1394520	Not Available	536	Open in IMG/M
3300019765\|Ga0194024_1153469	Not Available	541	Open in IMG/M
3300020328\|Ga0211567_1070070	Not Available	746	Open in IMG/M
3300020344\|Ga0211570_1075368	Not Available	773	Open in IMG/M
3300020380\|Ga0211498_10113470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1020	Open in IMG/M
3300020394\|Ga0211497_10185668	Not Available	799	Open in IMG/M
3300020411\|Ga0211587_10210913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	811	Open in IMG/M
3300020425\|Ga0211549_10117747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1028	Open in IMG/M
3300020425\|Ga0211549_10146997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	922	Open in IMG/M
3300020442\|Ga0211559_10159304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300020443\|Ga0211544_10381071	Not Available	564	Open in IMG/M
3300020447\|Ga0211691_10460500	Not Available	517	Open in IMG/M
3300020462\|Ga0211546_10044905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2162	Open in IMG/M
3300020478\|Ga0211503_10567011	Not Available	594	Open in IMG/M
3300021065\|Ga0206686_1159586	Not Available	659	Open in IMG/M
3300021084\|Ga0206678_10499683	Not Available	560	Open in IMG/M
3300021089\|Ga0206679_10303932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	866	Open in IMG/M
3300021791\|Ga0226832_10239791	Not Available	722	Open in IMG/M
3300021963\|Ga0222712_10120900	All Organisms → cellular organisms → Bacteria → Proteobacteria	1803	Open in IMG/M
3300026087\|Ga0208113_1121614	Not Available	585	Open in IMG/M
3300026091\|Ga0207962_1078567	Not Available	633	Open in IMG/M
3300026192\|Ga0207986_1067720	Not Available	820	Open in IMG/M
3300026199\|Ga0208638_1108748	Not Available	786	Open in IMG/M
3300026207\|Ga0208895_1161790	Not Available	579	Open in IMG/M
3300026321\|Ga0208764_10273389	Not Available	819	Open in IMG/M
3300027287\|Ga0255135_1038391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → unclassified Candidatus Fonsibacter → Candidatus Fonsibacter sp. PEL3	581	Open in IMG/M
3300027301\|Ga0255127_1078226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → unclassified Candidatus Fonsibacter → Candidatus Fonsibacter sp. PEL3	517	Open in IMG/M
3300027335\|Ga0255130_1021204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → Candidatus Fonsibacter ubiquis	1328	Open in IMG/M
3300027468\|Ga0209247_1003140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → Candidatus Fonsibacter ubiquis	2122	Open in IMG/M
3300027589\|Ga0255123_1021040	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300027755\|Ga0209034_10195173	Not Available	626	Open in IMG/M
3300027760\|Ga0209598_10313941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacterales incertae sedis → Candidatus Fonsibacter → unclassified Candidatus Fonsibacter → Candidatus Fonsibacter sp. PEL3	609	Open in IMG/M
3300027838\|Ga0209089_10703846	Not Available	518	Open in IMG/M
3300028190\|Ga0257108_1198295	Not Available	570	Open in IMG/M
3300028488\|Ga0257113_1232577	Not Available	528	Open in IMG/M
3300031599\|Ga0308007_10110012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1006	Open in IMG/M
3300031757\|Ga0315328_10747660	Not Available	550	Open in IMG/M
3300031773\|Ga0315332_10176181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1390	Open in IMG/M
3300031773\|Ga0315332_10868941	Not Available	543	Open in IMG/M
3300031775\|Ga0315326_10923544	Not Available	537	Open in IMG/M
3300031886\|Ga0315318_10670572	Not Available	584	Open in IMG/M
3300032032\|Ga0315327_10167278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1375	Open in IMG/M
3300032278\|Ga0310345_11680104	Not Available	620	Open in IMG/M
3300032360\|Ga0315334_10321351	Not Available	1293	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	91.82%
Freshwater	Environmental → Aquatic → Freshwater	8.18%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	45.45%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.36%
River	Environmental → Aquatic → Freshwater → River	4.55%
Volcanic	Environmental → Aquatic → Marine → Volcanic	4.55%
Coastal	Environmental → Aquatic → Marine → Coastal	3.64%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	32.73%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.36%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.00%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	9.09%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.36%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	4.55%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.64%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.91%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.91%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	28.18%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	9.09%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	9.09%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.45%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	4.55%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.64%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.64%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.82%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.82%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.82%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.82%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.82%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.82%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.91%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.91%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.91%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.91%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.91%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.91%
Marine Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine	0.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.91%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.91%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.91%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573025	Marine microbial communities from Columbia River, CM, sample from Newport Hydroline, GS310-FOS-0p8-Hyp-75m	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001780	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Supr46	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300005951	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006019	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_NADW_ad_2500m_LV_A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300008249	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon	Environmental	Open in IMG/M
3300008253	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009054	Estuarine microbial communities from the Columbia River estuary - metaG S.737	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009142	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009339	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 103m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011326	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S21 Surf_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011330	Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012522	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012935	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA5.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020328	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX555937-ERR599015)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020425	Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020443	Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026091	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026199	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027287	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepA_8d	Environmental	Open in IMG/M
3300027301	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8d	Environmental	Open in IMG/M
3300027335	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepB_8d	Environmental	Open in IMG/M
3300027468	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027589	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepA_8d	Environmental	Open in IMG/M
3300027755	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - 250m_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GS310G0146KB_00252740	2189573025	Marine Estuarine	IFIPKAFASLDLEMIQPSLLDKTTTGFLLILGLNNLSQET
JGI12421J11937_100574831	3300000756	Freshwater And Sediment	PACFASVDLEIMHPSLLDKTTTGFLLKSGLNNLSQET*
supr46_10476531	3300001780	Hydrothermal Vent Plume	IPRILASEDLEIIHPSLFDRTITGFLISEGLNNLSQDT*
GOS2246_101120504	3300001974	Marine	PKFFASVDLDMTQPSLLESTITGFLFIDGLNNLSHET*
GOS24894_101325802	3300002033	Marine	ALASVDLDITQPSLLDSTTTGFLIIDGLNNLSQET
GOS24894_103480701	3300002033	Marine	ISLALSRDHPILIPRVFASLDLEIIQPSLLDKTTTGLFRILGLNNLSQET
GOS24894_104700321	3300002033	Marine	ISLALSRDHPILIPRVFASLDLEIIQPSLLDKTTTGLFRILGLNNLSQET*
Ga0066837_102991032	3300005593	Marine	LASVDREITHPSLLDNTITGFLIIDVLNNLSQET*
Ga0066380_100870861	3300005948	Marine	SPILMPKALASVDREITHPSLLDNTTTGFLIIEGLNNLSHET*
Ga0066379_102498321	3300005951	Marine	KILASIDREITQPSLLDNTMIGFLINEGLNNLSQET*
Ga0066382_102318032	3300006013	Marine	YGSPILIPKALASIDREITQPSLFDSTITGFLIIDGLNNLSQET*
Ga0066375_101589091	3300006019	Marine	LIPKTLASIDLVIIHPSLFDKTTTGFLIIDGLNNLSQET*
Ga0066836_101826734	3300006166	Marine	FASIDLDITQPSLLERTITGFLFIDGLNNLSQET*
Ga0068472_103368421	3300006313	Marine	ALASVDREITHPSLLDNTITGFLIMDGLKSLSQET*
Ga0068472_103761701	3300006313	Marine	IYKALASADREITHPSLLDSTITGFLIIDGLNNLSQET*
Ga0068472_103796171	3300006313	Marine	PKVLASVDREITHPSLFDNTTTGFLIIDGLNNLSQET*
Ga0068472_104757571	3300006313	Marine	LDSFDREITHPSLLDSTMTGFLIIEGLNNLSQET*
Ga0068473_17354883	3300006316	Marine	KTLASVEREIMHPSLYEKTTTGLLIIDGSNNLSQET*
Ga0068497_13319612	3300006323	Marine	SPILMPKVLASVDREITPPSLLDNTITGFLIMDGLNNLSQET*
Ga0068488_12807024	3300006331	Marine	PILIPRALASEDLEIIHPSLFDRTITGFLISEGLNNLSQDT*
Ga0068488_13243673	3300006331	Marine	SPILIFKALASADREITHPSLFDNTMTGFLIIDGLNNLSQET*
Ga0068488_14349601	3300006331	Marine	SPILIFKALASTDREITHPSLLDNTITGLLIIDGSNNLSQET*
Ga0068482_12588141	3300006338	Marine	PKALASLDLEIIQPSLLDKTTTGLFLILGLNNLSQET*
Ga0100228_10891072	3300006565	Marine	MPKAFASLALEIIQPSLLDKTTTGFFLIFGLNNLSQET*
Ga0066372_103486611	3300006902	Marine	TLASVDREITHPSLLDNTTTGFLIIDGLNNLSQET*
Ga0066372_106512631	3300006902	Marine	SPILMPKALASADREITQPSLLDNTTTGFLIIDGLNNLSQET*
Ga0102855_11954522	3300007647	Estuarine	ILIPKAFASLDLEMIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0102862_11198992	3300007670	Estuarine	ILIPKAFASVDLEMIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0105353_11259872	3300008249	Methane Seep Mesocosm	LASVDREITHPSLLDNTTTGFLIIEGLNNLSHET*
Ga0105349_104553481	3300008253	Methane Seep Mesocosm	PIFIPKALASLDLEIIQPSLLDKTTTGLFLILGLNNLSQET*
Ga0102911_11032313	3300009049	Estuarine	ILIPKAFASLDLEIIQPSLLDKTITGFLLILGLNNLSQET*
Ga0102826_11315081	3300009054	Estuarine	KAFASLDLEMIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0102854_10302361	3300009058	Estuarine	KAFASVDLEMIQPSLLDKTTTGFLLILGLNNLSQDT*
Ga0115552_12910102	3300009077	Pelagic Marine	PKAFASLDLDIIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0118730_11483171	3300009132	Marine	ILIPKAFASLDLETIQPSLLDKTTTGFFLILGLNNLSQET*
Ga0102885_10100945	3300009142	Estuarine	PILMPRAFASVDLAMMQPSLLDKTTTGLFLILGLNNLSQET*
Ga0114968_100969171	3300009155	Freshwater Lake	IFIPSAFASSVLDTMQPSLLLNTTMGLFFKEGLNNLSQEA*
Ga0114995_105701791	3300009172	Marine	RDFASFDLAIMQPSLLDNTTTGLFLILGLNNLSQET*
Ga0117928_11532411	3300009339	Marine	KAFASLDLETIQPSLLDKTTTGFFLILGLNNLSQET*
Ga0114997_101192491	3300009425	Marine	AFASVDLEMIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0114997_102977043	3300009425	Marine	IFFASVDLEIKHPSLLESTTTGLFIILGLKSLSQET*
Ga0115559_12493881	3300009438	Pelagic Marine	ILIPKAFASFDLEMIQPSLLDKTTTGFLLILGLNNLSQET*
Ga0115557_13625071	3300009443	Pelagic Marine	ILIPSAFASVDLAMIQPSLLDKTMTGLFLILGLNNLSQET*
Ga0115554_11805051	3300009472	Pelagic Marine	PILIPKAFASLDLDIIQPSLLDKTTTGFLFILGLNNLSQDT*
Ga0114932_102211361	3300009481	Deep Subsurface	KAFASLDLEMIQPSLLDRTTTGFILILGLNSLSQET*
Ga0114932_103843751	3300009481	Deep Subsurface	ILIPSLFASVDLEITQPSLLDSTTTGLLLILGLNNLSQET*
Ga0114932_104570041	3300009481	Deep Subsurface	KIFASVDLDITQPSLLERTTTGFLDIDGLNNLSQET*
Ga0115003_100492361	3300009512	Marine	IPRALASFDLAIIQPSLFDKTITGLFLILGLNNLSQET*
Ga0114933_106629122	3300009703	Deep Subsurface	FFASVDLDITHPSLLDSTTTGTFCILGLNNLSQDT*
Ga0114933_110117922	3300009703	Deep Subsurface	FASVDLDIIHPSLFERTTTGFFIMCGLNNLSQDT*
Ga0115002_111787811	3300009706	Marine	RALASFDLAMMHPSLLDKTTTGLFLILGLNNLSQET*
Ga0115001_102747813	3300009785	Marine	GSPILMPIFFASTDLEITHPSLLESTTTGLFIILGLNNRSQET*
Ga0115001_105736272	3300009785	Marine	SPILIPIFLASVDLEITHPSLLESTTTGLSIILGLNNRSQDT*
Ga0115001_107008651	3300009785	Marine	IPRDFASFDLAIMQPSLLDNTITGLFLILGLNNLSQET*
Ga0115012_104412571	3300009790	Marine	IFIPKVFASLDLEIIQPSLLDKTTTGLFIIFGLNNLSQET*
Ga0133547_116447461	3300010883	Marine	AFASVDLAIMQPSLFDKTITGLFLILGLNNLSQET*
Ga0138403_11460312	3300011326	Marine	FASLDLEIIQPSLLDKTTTGFFLILGLNNLSQDT*
Ga0138383_12050371	3300011330	Marine	ILIPKAFASLDLEIIQPSLFDSTTTGFFLILGLNNLSHET*
Ga0129326_11771212	3300012522	Aqueous	KAFASLDLEIIQPSLFDKTTTGFFLILGLNNLSHET*
Ga0160422_111333332	3300012919	Seawater	GYPILIPNALASVDLDITQPSLFDSTTTGTFLILGLNNLSHET*
Ga0163110_109272921	3300012928	Surface Seawater	ILIPKAFASLDLEMIQPSLLDKTTTGFLLILGLNNLSHET*
Ga0138257_13559192	3300012935	Polar Marine	PIFIPRALASFDLAIIQPSLLDKTTTGLFLILGLNNLSQET*
Ga0163108_107677841	3300012950	Seawater	FASLDLEIIQPSLLDKTTTGLFLIFGLNNLSQET*
Ga0163180_112652312	3300012952	Seawater	PKAFASLDLEIIQPSLLDKTTTGFFLILGLNNLSQET*
Ga0163179_109100911	3300012953	Seawater	AFASLDLEMIQPSLLDKTTTGFLFILGLNNLSHET*
Ga0129343_13945201	3300012967	Aqueous	AFASLDLEMIQPSLFDKTTTGFFLILGLNNLSHET*
Ga0194024_11534691	3300019765	Freshwater	MPIFFASEDLEITHPSLLDKTTTGRKLIFGLKSLSQET
Ga0211567_10700702	3300020328	Marine	ALASVDREITHPSLLDNTITGFLIIDGLNNLSQET
Ga0211570_10753682	3300020344	Marine	ALASVEREITHPSLFDNTITGFLIIEGLNNLSQET
Ga0211498_101134703	3300020380	Marine	IAFASFDLDITQPSLFDKTTTGFFSILGLNNLSQET
Ga0211497_101856681	3300020394	Marine	PIAFASFDLDITQPSLFDKTTTGFFSILGLNNLSQET
Ga0211623_103070682	3300020399	Marine	IPRILASEDLEIIHPSLFDRTITGLFIREGLNNLSQET
Ga0211587_102109131	3300020411	Marine	ALASLDRDTTQPSLLDNTMTGLLINLGLNTLSQDT
Ga0211549_101177471	3300020425	Marine	SKTLASVEREITHPSLLDKTMTGFLIIDGLNNLSQET
Ga0211549_101469973	3300020425	Marine	PILISKALASVDREIIHPSLLDSTTTGFLIMDGLNNLSQET
Ga0211559_101593041	3300020442	Marine	FIPIAFASFDLDITQPSLFDKTTTGFFSILGLNNLSQET
Ga0211544_103810712	3300020443	Marine	LIPKAFASVDREMTHPSLFDNTMTGFLIIEGSNNLSQET
Ga0211691_104605001	3300020447	Marine	NVLASVDLDITQPSLLESTITGFLFIDGLNNLSQET
Ga0211546_100449051	3300020462	Marine	LLASVDLDITHPSLLDKTTTGLFIIEGLNNLSQET
Ga0211503_105670112	3300020478	Marine	IFIPKALASTDLDITQPSLLESTKTGFLVIEGLNNLSHET
Ga0206686_11595862	3300021065	Seawater	KAFTSVDREITHPSLLDNTMTGFLIIDGSNNLSQET
Ga0206678_104996831	3300021084	Seawater	ILMPKALASVDREITHPSLLDNTTTGFLIIEGLNNLSHET
Ga0206679_103039321	3300021089	Seawater	KILASVDREITQPSLLDRTTTGFLFIDGLNNLSQET
Ga0226832_102397912	3300021791	Hydrothermal Vent Fluids	MPKVLASVDREITHPSLLDNTTTGFLIIDGLNNLSQET
Ga0222712_101209001	3300021963	Estuarine Water	TCFASVDLEIIQPSLLDKTTTGFLLKSGLNNLSQET
Ga0208113_11216141	3300026087	Marine	LIPKILASVDREITHPSLLDSTITGFLIIDGLNNLSQET
Ga0207962_10785671	3300026091	Marine	IFIPKIFASVDREITHPSLLDNTMTGFLIIEGLNNLSQET
Ga0207986_10677202	3300026192	Marine	GSPILISRILASVDREITHPSLLDNTMTGFLIIKGLNNLSQET
Ga0208638_11087481	3300026199	Marine	PILIPRVLASVDREITHPSLLDNTITGFLIIDVLNNLSQET
Ga0208895_11617901	3300026207	Marine	PKTLASVEREMTHPSLFDNTTTGFFIIDGLNNLSHET
Ga0208764_102733892	3300026321	Marine	YGSPIFIPKFLASVDLDITQPSLFDRTTTGFLSIDGLNNLSQET
Ga0255135_10383912	3300027287	Freshwater	LIPACLASVDLEIIQPSLLDKTTTGFRLRSGLNNLSQET
Ga0255127_10782262	3300027301	Freshwater	PTCFASVDLEIIQPSLLDKTTTGFRLRSGLNNLSQET
Ga0255130_10212044	3300027335	Freshwater	LIPTCFASVDLEIIQPSLLDKTTTGFLLRSGLNNLSQET
Ga0209247_10031405	3300027468	Freshwater Lake	PILMPACFASVDREIMHPSLLDKTTTGFLLKSGLNNLSQET
Ga0255123_10210401	3300027589	Freshwater	PILIPACFASVDLEIIQPSLLDKTTTGFRLRSGLNNLSQET
Ga0209034_101951732	3300027755	Marine	FIPKIFASTDLDITQPSLLERTTAGFLFIDGLNNLSQET
Ga0209598_103139411	3300027760	Freshwater Lake	CFASVDREIMHPSLLDKTTTGFLLKSGLNNLSQET
Ga0209089_107038462	3300027838	Marine	IALASVDRDITHPSLLDNTMTGFLIIDGLNNLSQET
Ga0257108_11982952	3300028190	Marine	PILMPKALASVDREITHPSLLDNTTTGFLIIEGLNNLSHET
Ga0257113_12325772	3300028488	Marine	ILMPKTLASIDREITHPSLLDNTTTGFLITDGLNNLSQET
Ga0308007_101100121	3300031599	Marine	RALASFDLAMIQPSLLDKTTTGLFLILGLNNLSQET
Ga0315328_107476601	3300031757	Seawater	IPKAFASIDLDITQPSLLESTTTGFLFIDGLNNLSQET
Ga0315332_101761814	3300031773	Seawater	LMPKALASVDREITHPSLLDNTTTGFLIIEGLNNLSHET
Ga0315332_108689412	3300031773	Seawater	PKFFASADLDITQPSLLERTTTGFLFIDGLNNLSQET
Ga0315326_109235442	3300031775	Seawater	LKYGSPIFIPKFLASVDLDITQPSLFDRTTTGFLSIDGLNNLSQET
Ga0315318_106705721	3300031886	Seawater	PKTLASVDRDITQPSLLDKTITGFLIIDGLNNLSQET
Ga0315327_101672781	3300032032	Seawater	MPKILASVDREITQPSLLDRTITGFLVIEGLNNLSHET
Ga0310345_116801041	3300032278	Seawater	SDLASVDLDITQPSLLERTTTGFFSIDGLNNLSQET
Ga0315334_103213514	3300032360	Seawater	KLLASVDLDITQPSLFDRTITGFLSIDGLNNLSQET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences