Metagenome Family F087752

Basic Information
Family ID	F087752
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	44 residues
Representative Sequence	SLTARKAVFVVEKRVDSPEISPRSGGVGASRQDKRNGELRSL
Number of Associated Samples	19
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.19 %
% of genes near scaffold ends (potentially truncated)	76.36 %
% of genes from short scaffolds (< 2000 bps)	98.18 %
Associated GOLD sequencing projects	17
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (70.000 % of family members)
Environment Ontology (ENVO)	Unclassified (74.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005913\|Ga0075108_10293650	Not Available	539	Open in IMG/M
3300005914\|Ga0075117_1131605	Not Available	726	Open in IMG/M
3300006164\|Ga0075441_10250348	Not Available	653	Open in IMG/M
3300006164\|Ga0075441_10330636	Not Available	555	Open in IMG/M
3300006165\|Ga0075443_10031783	Not Available	1765	Open in IMG/M
3300006165\|Ga0075443_10048460	Not Available	1426	Open in IMG/M
3300006165\|Ga0075443_10074670	Not Available	1151	Open in IMG/M
3300006165\|Ga0075443_10084443	Not Available	1084	Open in IMG/M
3300006165\|Ga0075443_10084955	Not Available	1081	Open in IMG/M
3300006165\|Ga0075443_10097779	Not Available	1010	Open in IMG/M
3300006165\|Ga0075443_10113583	Not Available	939	Open in IMG/M
3300006165\|Ga0075443_10133957	Not Available	867	Open in IMG/M
3300006165\|Ga0075443_10135653	Not Available	862	Open in IMG/M
3300006165\|Ga0075443_10144573	Not Available	836	Open in IMG/M
3300006165\|Ga0075443_10151991	Not Available	816	Open in IMG/M
3300006165\|Ga0075443_10160356	Not Available	796	Open in IMG/M
3300006165\|Ga0075443_10160935	Not Available	794	Open in IMG/M
3300006165\|Ga0075443_10162230	Not Available	791	Open in IMG/M
3300006165\|Ga0075443_10165637	Not Available	783	Open in IMG/M
3300006165\|Ga0075443_10212363	Not Available	695	Open in IMG/M
3300006165\|Ga0075443_10218244	Not Available	686	Open in IMG/M
3300006165\|Ga0075443_10223444	Not Available	678	Open in IMG/M
3300006165\|Ga0075443_10239475	Not Available	656	Open in IMG/M
3300006165\|Ga0075443_10243264	Not Available	652	Open in IMG/M
3300006165\|Ga0075443_10255699	Not Available	636	Open in IMG/M
3300006165\|Ga0075443_10257382	Not Available	634	Open in IMG/M
3300006165\|Ga0075443_10265035	Not Available	625	Open in IMG/M
3300006165\|Ga0075443_10265951	Not Available	624	Open in IMG/M
3300006165\|Ga0075443_10281771	Not Available	607	Open in IMG/M
3300006165\|Ga0075443_10289608	Not Available	600	Open in IMG/M
3300006165\|Ga0075443_10289801	Not Available	599	Open in IMG/M
3300006165\|Ga0075443_10302314	Not Available	588	Open in IMG/M
3300006165\|Ga0075443_10302443	Not Available	587	Open in IMG/M
3300006165\|Ga0075443_10304584	Not Available	585	Open in IMG/M
3300006165\|Ga0075443_10307997	Not Available	582	Open in IMG/M
3300006165\|Ga0075443_10311324	Not Available	580	Open in IMG/M
3300006165\|Ga0075443_10328028	Not Available	565	Open in IMG/M
3300006165\|Ga0075443_10328028	Not Available	565	Open in IMG/M
3300006165\|Ga0075443_10339161	Not Available	557	Open in IMG/M
3300006165\|Ga0075443_10341832	Not Available	554	Open in IMG/M
3300006165\|Ga0075443_10357985	Not Available	543	Open in IMG/M
3300006165\|Ga0075443_10366508	Not Available	536	Open in IMG/M
3300006165\|Ga0075443_10375355	Not Available	530	Open in IMG/M
3300006165\|Ga0075443_10390609	Not Available	520	Open in IMG/M
3300006165\|Ga0075443_10391920	Not Available	520	Open in IMG/M
3300006165\|Ga0075443_10393844	Not Available	518	Open in IMG/M
3300006165\|Ga0075443_10397053	Not Available	516	Open in IMG/M
3300006165\|Ga0075443_10398932	Not Available	515	Open in IMG/M
3300006165\|Ga0075443_10398932	Not Available	515	Open in IMG/M
3300006165\|Ga0075443_10400520	Not Available	514	Open in IMG/M
3300006165\|Ga0075443_10403674	Not Available	512	Open in IMG/M
3300006165\|Ga0075443_10420943	Not Available	502	Open in IMG/M
3300006165\|Ga0075443_10422866	Not Available	501	Open in IMG/M
3300007519\|Ga0105055_11212057	Not Available	528	Open in IMG/M
3300007520\|Ga0105054_11041760	Not Available	565	Open in IMG/M
3300007520\|Ga0105054_11059443	Not Available	558	Open in IMG/M
3300007520\|Ga0105054_11096839	Not Available	544	Open in IMG/M
3300007520\|Ga0105054_11102779	Not Available	542	Open in IMG/M
3300007522\|Ga0105053_10567129	Not Available	900	Open in IMG/M
3300007522\|Ga0105053_10738125	Not Available	735	Open in IMG/M
3300007522\|Ga0105053_10738125	Not Available	735	Open in IMG/M
3300009432\|Ga0115005_10741158	Not Available	790	Open in IMG/M
3300009432\|Ga0115005_10885057	Not Available	720	Open in IMG/M
3300009432\|Ga0115005_11061536	Not Available	657	Open in IMG/M
3300009432\|Ga0115005_11712738	Not Available	516	Open in IMG/M
3300009432\|Ga0115005_11749677	Not Available	510	Open in IMG/M
3300009432\|Ga0115005_11799996	Not Available	502	Open in IMG/M
3300009441\|Ga0115007_10645528	Not Available	707	Open in IMG/M
3300009441\|Ga0115007_10948265	Not Available	589	Open in IMG/M
3300009512\|Ga0115003_10664592	Not Available	607	Open in IMG/M
3300013010\|Ga0129327_10191203	Not Available	1030	Open in IMG/M
3300013010\|Ga0129327_10376065	Not Available	749	Open in IMG/M
3300013010\|Ga0129327_10390880	Not Available	736	Open in IMG/M
3300013010\|Ga0129327_10894349	Not Available	510	Open in IMG/M
3300020052\|Ga0181554_1380181	Not Available	504	Open in IMG/M
3300020052\|Ga0181554_1380181	Not Available	504	Open in IMG/M
3300022832\|Ga0222707_1008047	Not Available	1418	Open in IMG/M
3300022832\|Ga0222707_1059837	Not Available	511	Open in IMG/M
3300023227\|Ga0222690_1037307	Not Available	603	Open in IMG/M
3300023230\|Ga0222709_1036632	Not Available	635	Open in IMG/M
3300023231\|Ga0222689_1038631	Not Available	616	Open in IMG/M
3300023429\|Ga0222710_1026198	Not Available	1015	Open in IMG/M
3300023429\|Ga0222710_1044236	Not Available	760	Open in IMG/M
3300027771\|Ga0209279_10076460	Not Available	949	Open in IMG/M
3300027771\|Ga0209279_10082039	Not Available	916	Open in IMG/M
3300027771\|Ga0209279_10122375	Not Available	750	Open in IMG/M
3300027771\|Ga0209279_10149347	Not Available	682	Open in IMG/M
3300027771\|Ga0209279_10149380	Not Available	682	Open in IMG/M
3300027771\|Ga0209279_10150188	Not Available	680	Open in IMG/M
3300027771\|Ga0209279_10180071	Not Available	625	Open in IMG/M
3300027771\|Ga0209279_10185939	Not Available	615	Open in IMG/M
3300027771\|Ga0209279_10201294	Not Available	594	Open in IMG/M
3300027771\|Ga0209279_10202803	Not Available	592	Open in IMG/M
3300027771\|Ga0209279_10206580	Not Available	587	Open in IMG/M
3300027771\|Ga0209279_10215846	Not Available	575	Open in IMG/M
3300027771\|Ga0209279_10218827	Not Available	571	Open in IMG/M
3300027771\|Ga0209279_10229339	Not Available	559	Open in IMG/M
3300027771\|Ga0209279_10231452	Not Available	557	Open in IMG/M
3300027771\|Ga0209279_10238307	Not Available	550	Open in IMG/M
3300027771\|Ga0209279_10242989	Not Available	545	Open in IMG/M
3300027771\|Ga0209279_10246378	Not Available	542	Open in IMG/M
3300027771\|Ga0209279_10268243	Not Available	522	Open in IMG/M
3300027771\|Ga0209279_10271096	Not Available	519	Open in IMG/M
3300027771\|Ga0209279_10284223	Not Available	509	Open in IMG/M
3300027771\|Ga0209279_10285419	Not Available	508	Open in IMG/M
3300027771\|Ga0209279_10286292	Not Available	507	Open in IMG/M
3300027771\|Ga0209279_10291478	Not Available	503	Open in IMG/M
3300027810\|Ga0209302_10467800	Not Available	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	84.55%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	8.18%
Freshwater	Environmental → Aquatic → Freshwater	7.27%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	70.00%
Oceanic	Environmental → Aquatic → Marine → Oceanic	9.09%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	8.18%
Ice	Environmental → Aquatic → Freshwater → Ice	7.27%
Coastal	Environmental → Aquatic → Marine → Coastal	3.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	70.00%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	8.18%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	7.27%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.82%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	70.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.09%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	7.27%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	6.36%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.82%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005913	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1	Environmental	Open in IMG/M
3300005914	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300022832	Saline water microbial communities from Ace Lake, Antarctica - #1574	Environmental	Open in IMG/M
3300023227	Saline water microbial communities from Ace Lake, Antarctica - #1234	Environmental	Open in IMG/M
3300023230	Saline water microbial communities from Ace Lake, Antarctica - #1692	Environmental	Open in IMG/M
3300023231	Saline water microbial communities from Ace Lake, Antarctica - #1231	Environmental	Open in IMG/M
3300023429	Saline water microbial communities from Ace Lake, Antarctica - #1696	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075108_102936502	3300005913	Saline Lake	SCSLVSLNAHRAVFVVEKRVDSPKISPRFGGMGASRQDERNEGLRSL*
Ga0075117_11316051	3300005914	Saline Lake	LTSRKAVFVVEKRVSSPEILPRSGGVGASRQDKRNEKLCSLSLGAYH
Ga0075441_102503481	3300006164	Marine	STSDLSCFSLSLTARKAVFVVEKRVDSPEISPHSGGVGASSQDERNGELR*
Ga0075441_103306361	3300006164	Marine	SLTARKAVFVVEKRVDSPEISPRSGGVGASRQDKRNGELRSL*
Ga0075443_100317831	3300006165	Marine	LAVRKAVIVVEKRIDSPEISPQSGGVGASRQDKRNGELRSL*
Ga0075443_100484602	3300006165	Marine	SSASLTARKAVFVVEKRVDWPKIPPVTYGVSASRQGKRNGELRSL*
Ga0075443_100746701	3300006165	Marine	VVLTAHRAVFVVEKRVDSSPEISPRSGGIGASRQDKRNEKLRSL*
Ga0075443_100844431	3300006165	Marine	VSSCSLLSLTARKAVSVVEQRVDSPEILTQSGGLGASRQDKRNGE
Ga0075443_100849552	3300006165	Marine	LTARKAVFVVENRIDSPEKSPQSGGVGASRQDKRNEELRSL*
Ga0075443_100977791	3300006165	Marine	LTARKTVFVVEKRVDSLKISPQSGGVGASSQDKRNGELRSLS
Ga0075443_101135831	3300006165	Marine	LTARKAVFVVEKRVDSPKKSHLTNGVGASSQDKHIEELHSL*
Ga0075443_101339571	3300006165	Marine	DSSCSSVSLTAHKAVFVVEKSVKSSEMSPRSGGVGASSQDKRNGKLRSL*
Ga0075443_101356531	3300006165	Marine	AVFVVEKRVDSPKISPRSGGVGASRQDKRNEELCSL*
Ga0075443_101445731	3300006165	Marine	RKAVFVVEKLVDRPEISPRSGGVGASRQDKHNEKLCSLYPGAYHTVG*
Ga0075443_101519912	3300006165	Marine	LTARKAVFVVEKRVDSPEISPQSGGVGASRQDKRN*
Ga0075443_101603561	3300006165	Marine	KTVFVVEKRVDSPEISPLSDGVGASRQDKRNKKLCSLSLGAYHTAG*
Ga0075443_101609351	3300006165	Marine	ACKAVFVVEKRVESPEILPRSGGVGAFRQDKRNGELCSF*
Ga0075443_101622302	3300006165	Marine	VSLTTRKAVFVVEMQVNGPEISPRSGGAGASKQDKRIGELRSL*
Ga0075443_101648301	3300006165	Marine	FSVSLTARKAVFVVKKRVKSSEISPQSGGVGAISQDKRSGELRLLLLRAYHTVG*
Ga0075443_101656372	3300006165	Marine	CESSCSLVSLTARKAVIMVEKRVDSPEILPQSGGVGASRQDKRNEKLCSLSLGAYHTAG*
Ga0075443_102123632	3300006165	Marine	CFSVSLTARKAVFVVKKRVDSPEISPQSRGFGAFRQDKRNGELRSL*
Ga0075443_102182442	3300006165	Marine	LTARKAVVFVVEKRVDSPEISPQSGGVGAFRQDKRNEKLRSL*
Ga0075443_102234441	3300006165	Marine	ARKAVFVVEKRVDSPEISPQSGGVGASRQDERNGELRSLYPGTYHTVG*
Ga0075443_102394751	3300006165	Marine	KAVFVVEKRVDSPEISPRSGGVGASRQDKRNEELYSL*
Ga0075443_102432641	3300006165	Marine	MSMCDSSSSLVSLTARKAVFVVEKRVDGPKISPQSSGVGASRHDKRD*
Ga0075443_102556991	3300006165	Marine	LVSLTARKAVFVVEKRVDSPKISPRSGGVGASRQDKSDRELLSL*
Ga0075443_102573821	3300006165	Marine	ARKAVFVVEKRVDSPEISPRSGGVGAARQDKRNGELHSL*
Ga0075443_102650352	3300006165	Marine	VFVVEKRVDSLKISPQSGGVGTSSKDKRNGELRSLSLRAYHTVGRGQRAIHRAFHSL*
Ga0075443_102659512	3300006165	Marine	SLTARKAVFVVEKRVDSPEISPRSDGVGAFRQDKRTKELRSS*
Ga0075443_102817712	3300006165	Marine	AVFVVEKRVDSPEISPRSGGVGASRQDKRNGELHSF*
Ga0075443_102896081	3300006165	Marine	MQAVFVVEKRVDSPEMLPQSGGVGASRQDKRNEKLCSLSLGAY
Ga0075443_102898011	3300006165	Marine	CFSVSLTARKAVFVVEKRVDSPEISPRSGGVGAARQDKHNGELRSL*
Ga0075443_103023142	3300006165	Marine	VFLTARKAVFVVEKRVDSPKISSRSGGVGASRQDKRNGELRSL*
Ga0075443_103024431	3300006165	Marine	LAARKAVFVVEKRVDSPEISPRSGGVGALKQDKRNGELRSM*
Ga0075443_103045841	3300006165	Marine	RKAVYVVKKRVDSPKTSPRSGSVGATSQDRRDRELRSLSLEAYHTVE*
Ga0075443_103079971	3300006165	Marine	LTARKAVFVVEKRVDSPEKSPQSDGVGASSQDKRNGELRSL*
Ga0075443_103113241	3300006165	Marine	LIARKAAFVVDKRIDNPEISPQSGGVGASRQDKRNEELRLL*
Ga0075443_103280282	3300006165	Marine	LSFSVFLTARKAVFVVEKRVDSPEISPQSGGVGAARQDKGNGELRSL*
Ga0075443_103280283	3300006165	Marine	TARKAVFVVEKRVDSPEISPQSGGVGAARQDKRNGELLSL*
Ga0075443_103391612	3300006165	Marine	AVFVVEKRVDGPEVSPRSGGVGASRQDERNKELRSL*
Ga0075443_103418322	3300006165	Marine	KAVFVVEKRFDGPEMPPRSGGVGASRQDKRNGELRSL*
Ga0075443_103579851	3300006165	Marine	VFVVEKPVDDPEISPQSGGVGASRQDKRNGELRFL*
Ga0075443_103665082	3300006165	Marine	ARKAVFVVEKSVKSPEITPQSGGVGASRQEKRNGKLRSL*
Ga0075443_103753551	3300006165	Marine	SLVSLTAQRAVFVVEKRVDSPEISPQSGGVGASRQDTRNGELRSLSLGAYHTVE*
Ga0075443_103906091	3300006165	Marine	AVFVVEKWVDSPEISPQSGGVGASRQDKRNEEQRSL*
Ga0075443_103919201	3300006165	Marine	PLTARKAVFVVEKRVNWPELSPRSSGAGVSRQDKRSEELRSL*
Ga0075443_103938442	3300006165	Marine	SLTARKAVFVVEKSVKSPEMSPRSGGVGASRQDKRNGKLRSL*
Ga0075443_103970532	3300006165	Marine	LTERKAMFVVEKWVDNPEISPRYSGVDASKQDKRNENQRSL*
Ga0075443_103989321	3300006165	Marine	LTARNAVFVVEKQVDSPEISTQSGGVGASRQDKRNGELRSL*
Ga0075443_103989322	3300006165	Marine	SLTARKAMFVVEKQVDSPEISPQSGGVGASRQDKHNGELRSL*
Ga0075443_104004742	3300006165	Marine	SCFSLSLTARKAVFVVKKRVASPKISPKSGGVGAFRQDKRNGELRSLLLRAYHSVG*
Ga0075443_104005201	3300006165	Marine	SVALTARKAVFVVKKSVKSPEMSPRSGGVGASRHDKRNGKLRSL*
Ga0075443_104036741	3300006165	Marine	LTARKAMFVVEKRVDSPEISPRSGGVGASRQDKRNEELRSL*
Ga0075443_104209432	3300006165	Marine	CSLVFLTAHRAVFEVEKRVDSPEISSRSGGIGASRQDKSDRELRSLSLGAYRNVR*
Ga0075443_104228662	3300006165	Marine	TARKAVFVVEKRVDSPEISPRSGGVGASRQDKRNGEQRSL*
Ga0105055_112120572	3300007519	Freshwater	LTARKAEFVVEKRVDSPKISPRFGGVGASRQDKRDRELCSL*
Ga0105054_110417601	3300007520	Freshwater	MAVFVVEKRVDSPKLLPKSGGVGASGQDKPIEKLCSLSLGAYHTVG*
Ga0105054_110594432	3300007520	Freshwater	VSLTARKAEFVVEKRVDSPKISPRFGGVGASRQDKRKEKLCSLSLGAYHTVG*
Ga0105054_110968392	3300007520	Freshwater	SLTSRKAVFVVEKRVSSPEILPRSGGVGSSRQDKRNEKLCSLSLGAYHTVGRGQRAIYHAP*
Ga0105054_111027792	3300007520	Freshwater	FVVEKRVSSPEISLRSGGVGASRQDKRNEELCSLSLVAYHTVE*
Ga0105053_105671291	3300007522	Freshwater	VVKKRVDSPKISPRFGGVGASRQDKRKEKLCSLSLGAYHTAG*
Ga0105053_107381251	3300007522	Freshwater	LTTRKAVFVVEKRVSSPEILPRFGGVGASRQHNRKEKLCSLSLGLTTLSGEVNA
Ga0105053_107381253	3300007522	Freshwater	VSLTSRKAVFVVEKRVSSPEILPRSGGVGASRQDKRNEKLYSLSLGAYHTVG*
Ga0115005_107411581	3300009432	Marine	RKAMFVVEKRVDSPEISPRSGGVGASRQDKRNRELRSL*
Ga0115005_108850571	3300009432	Marine	LTARKAMFVVEKRVDSPEISPRSGGVGASRQDKRNGELRSL*
Ga0115005_110615362	3300009432	Marine	VFVVEKRVDSPEISPQFGGVGAASHDKRNGELRSL*
Ga0115005_117127381	3300009432	Marine	VFVVEKRFGSPEISPRSGDVGASRQDKRNGELRSL*
Ga0115005_117496771	3300009432	Marine	DSSCSSVSLTARKAVFVVEKRVDSPEMSPRSGGVGVIRQDKRNGELRSL*
Ga0115005_117999962	3300009432	Marine	MIVVEKRVDGPKKLPKSGGVGASRQDKRNKKLRSL*
Ga0115007_106455281	3300009441	Marine	SLTERKAVIVVEKRVDSPEISPQSGGVGAPRQDKRNVELRSL*
Ga0115007_109482651	3300009441	Marine	MRDSSFSLVSLTARKAVFVVEKRVDSPKISPRSGGAAASRQNKRNEKRWSLSLGTYHTVG
Ga0115003_106645921	3300009512	Marine	LTARKAVFVVEKSVKSPEMAPRSGGVGASRQDKRNGKLRSLQLGTNHKA*
Ga0129327_101912031	3300013010	Freshwater To Marine Saline Gradient	LTARKAVFVVEKRVDSPEISPRSGGVGAARQDKRNEELR
Ga0129327_103760652	3300013010	Freshwater To Marine Saline Gradient	MTTRKAVIVMEKRVDSPEMSPQSGSVGAARQVKRNEELCSL*
Ga0129327_103908801	3300013010	Freshwater To Marine Saline Gradient	LTVRKAVFVVEKRVDLPEMSPRSGGVGASKQDKRNGELRSLCVGTYHTAGWSQ
Ga0129327_108943491	3300013010	Freshwater To Marine Saline Gradient	LTVRKAVFVVEKWVESPEKSPRSGGVGVSRHDKRNGEL
Ga0181554_13801811	3300020052	Salt Marsh	SVSLTARKAVFVVEKRVDSPEISPQSGGVGAVRQDKRNGELRSL
Ga0181554_13801812	3300020052	Salt Marsh	LTARKAVFVVEKRVDSPEISPRSGGVGAARQDKRNGELR
Ga0222707_10080473	3300022832	Saline Water	LTARKAVFVVEKRVGSPKILPRFGGVGAFRQDKRNEKLCSLSLGA
Ga0222707_10598371	3300022832	Saline Water	VFVVEKRVDSPKISPRFGGMGASRQDERNEGLRSL
Ga0222690_10373071	3300023227	Saline Water	VVKKRVDSPKISPRFGGVGASRQDKRNEKLCSLSLGAY
Ga0222709_10366321	3300023230	Saline Water	KAEFAVEKRVDSPKILHQSGGVGTSRQDKRNEKLCSLSPGVYHTVG
Ga0222689_10386311	3300023231	Saline Water	VVKKRVDSPKISPRFGGVGASRQDKRNEKLCSLSLGA
Ga0222710_10261981	3300023429	Saline Water	MAVFVVEKRVDSPKLLPKSGGVGASRQDKPIEKLCSLSLGAYHNVG
Ga0222710_10442361	3300023429	Saline Water	SLTGQRAEFVVKKRVDSPKISPRFGGVGASRQDKRKEKLCSLSLGAYHTVG
Ga0209279_100764601	3300027771	Marine	LNARKAVFVVEKRVDSPDISPRSVGVGASRQDKRNEGLRSL
Ga0209279_100820391	3300027771	Marine	LTARKAVFVVKKRVDSPEISPQSGGVGASRQDKRNDELRSL
Ga0209279_101223751	3300027771	Marine	LTARKAVFVLEKRVDSLKISPQSGGVGSSMQGKRNEKLRSLSLGAYHIVG
Ga0209279_101493472	3300027771	Marine	LTARKAVFEVEKRVDSPEISPQSGGVGAARQGKRN
Ga0209279_101493801	3300027771	Marine	LVVLTAHRAVFVVEKRVDSPEISPRSGVGASRQDTRDGELRSL
Ga0209279_101501881	3300027771	Marine	VVEKRVESPEISPKYGGVGAFRQDKRNGELRSLLLRAYY
Ga0209279_101800712	3300027771	Marine	SLTARKAVFVVEKRVDSPEISPRSDGVGAFRQDKRTKELRSS
Ga0209279_101859391	3300027771	Marine	CFLISLTARKTVFVETTRVDSPEISPRSGGMGASMQGKLNGELRSL
Ga0209279_102012942	3300027771	Marine	LTERKAMFVVEKWVDNPEISPRYSGVDASKQDKRNENQRSL
Ga0209279_102028031	3300027771	Marine	MQAVFVVEKRVDSPEMLPQSGGVGASRQDKRNEKLCSLSLG
Ga0209279_102065801	3300027771	Marine	LIARKAAFVVDKRIDNPEISPQSGGVGASRQDKRNEELRLL
Ga0209279_102158461	3300027771	Marine	AVFVVEKRVDSPKISPQSGGVGASRQDKLDVELRSL
Ga0209279_102188271	3300027771	Marine	SLGSLTAHRAVFEVEKRVDSPEISARSGGVGASRQDKRDRELRSL
Ga0209279_102293391	3300027771	Marine	AVFVVEKRVDSPEISPQSDGEGASRQDERNEELRSL
Ga0209279_102314522	3300027771	Marine	LVSLTARKAVIVVEKWVDSPKISPQSGGVGASRQDKRNGELRSLSLEAYHTVG
Ga0209279_102383071	3300027771	Marine	LVSLTAHRAEFVVEKRVGSPEISPRFGGLGASRQDKRDRELRSL
Ga0209279_102429891	3300027771	Marine	RKAVFVVEKRVDSPEISPQSGGVGASSQDKRNGELRSLSLRTYRVVG
Ga0209279_102463781	3300027771	Marine	MTAHKAMFEVEKQVDIPEISPRSGGVGAFRQDKRNVKL
Ga0209279_102682431	3300027771	Marine	LTARKTVFVVEKRVDSPQISPQSGGVGASRQDKRNEELRSLSLKAYHTVE
Ga0209279_102710961	3300027771	Marine	LTARKAVFVVEKRVEGPEISPRSGGVDASRQDKRN
Ga0209279_102842232	3300027771	Marine	LTARNAVFVVEKQVDSPEISTQSGGVGASRQDKRN
Ga0209279_102854191	3300027771	Marine	VSSCSLLSLTARKAVFVVEKRVDSPEISTRSDGVGAFRQDKRNEE
Ga0209279_102862921	3300027771	Marine	LSVSLTARKAMFVVENRVDSPEVSPQSGGVGVSRQDNRNEQLCSLLLRVYHTIG
Ga0209279_102914782	3300027771	Marine	LTARKAVFVVEKRVDSPEKSPQSDGVGASSQDKRNGELRSL
Ga0209302_104678002	3300027810	Marine	AVFVVEKRVESPDISPRSGGLGAFRQDKRNEELRSL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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