Metagenome Family F087860

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087860
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	42 residues
Representative Sequence	IGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Number of Associated Samples	19
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.91 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	15
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (98.182 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF15502	MPLKIP	0.91
PF10149	TM231	0.91
PF02801	Ketoacyl-synt_C	0.91
PF14572	Pribosyl_synth	0.91
PF00078	RVT_1	0.91
PF16087	DUF4817	0.91
PF02170	PAZ	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
All Organisms	root	All Organisms	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
cellular organisms	root	All Organisms → cellular organisms	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.09 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300028325\|Ga0268261_10031863	All Organisms → cellular organisms → Eukaryota → Opisthokonta	4362	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	99.09%
Insecta	Host-Associated → Insecta	0.91%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	99.09%
Digestive System	Host-Associated → Insecta → Digestive System	0.91%

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	99.09%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	98.18%
Proctodeal Segment	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment	0.91%
Unclassified	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	98.18%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut	0.91%
Termite Gut	Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated	Open in IMG/M
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated	Open in IMG/M
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated	Open in IMG/M
3300002238	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1	Host-Associated	Open in IMG/M
3300002308	Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4	Host-Associated	Open in IMG/M
3300002462	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4	Host-Associated	Open in IMG/M
3300002508	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1	Host-Associated	Open in IMG/M
3300005200	Nasutitermes gut metagenome	Host-Associated	Open in IMG/M
3300027539	Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)	Host-Associated	Open in IMG/M
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated	Open in IMG/M
3300027670	Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)	Host-Associated	Open in IMG/M
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027960	Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)	Host-Associated	Open in IMG/M
3300027966	Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated	Open in IMG/M
3300028325	Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)	Host-Associated	Open in IMG/M
3300028327	Nasutitermes corniger P3 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P3 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_103598432	3300001544	Termite Gut	VKEAASVVQCWPLVPKFAGSNPAEAVGFLRAKKSSAHFPSEGK*
JGI20163J15578_104802031	3300001544	Termite Gut	GLGVACWPLEPKFAGSNPAEAVGFLRAKKSSALLPSEGK*
JGI20163J15578_104976941	3300001544	Termite Gut	GLGVSCWPLVPKLAGSNPAEAVGFLSTKKSSARLPSEGK*
JGI20163J15578_105654861	3300001544	Termite Gut	MPGSGFGGLGVASWPLVPKFAEAEAVGFLRAKKSSARLPSEGK*
JGI20165J26630_100410633	3300002125	Termite Gut	FGGLDVVRWRLVPKFRDSNPAEAVRFLRAKKSSAHLPSEGK*
JGI20165J26630_106594682	3300002125	Termite Gut	MGTTCNESGLGGLRVACWPLVPKFAGSNPAEAVGCLRAKKSSAR
JGI20166J26741_101128171	3300002175	Termite Gut	MGQPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
JGI20166J26741_110730484	3300002175	Termite Gut	MVPYRLQCWPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
JGI20166J26741_117839563	3300002175	Termite Gut	MFSGFGGLGVACWPLEPKFAGSNPAEAVGFLRAKKSSARLPS
JGI20163J26743_105788291	3300002185	Termite Gut	GGLEVVCWPLVPKLAGSNPAEAIGFLRVKKSSARLPSEG*
JGI20163J26743_114129211	3300002185	Termite Gut	ACWPLVPKFAGSNPAEAVGILRAKKSSARLPSEGE*
JGI20169J29049_109882241	3300002238	Termite Gut	CWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK*
JGI20169J29049_113928213	3300002238	Termite Gut	EVACWPLVPKFAGSNPAEAVGFLRAKKSSARLTSEGK*
JGI20171J29575_124046761	3300002308	Termite Gut	MFCMQYVDGFGGLEVAVPKFAGSNLAEAVGFLRAKKSSARLPSEG
JGI24702J35022_104007212	3300002462	Termite Gut	GGLGVACCPLVPKFVGSDPAEAVGFLRAKKSSAHIPSEG*
JGI24700J35501_104342761	3300002508	Termite Gut	GGLEVACWPLVPKFVGSNPAEAVGFLRAKKFSARLPSEGK*
JGI24700J35501_108564806	3300002508	Termite Gut	GLGVACWPLVPKFAGSNPAEAVGFLRAKKSSAHLPSEGK*
Ga0072940_11561341	3300005200	Termite Gut	LNSTYINALKNGFGDLEAACWPLVPKFACSHLAEAXXFLGRKKKSSTR
Ga0209424_10651681	3300027539	Termite Gut	RIIGFGGLEVACWPLVPKFAGSNLAEAVGFLRAKISSACLPSEGK
Ga0209424_11112341	3300027539	Termite Gut	MIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARL
Ga0209424_11481011	3300027539	Termite Gut	VKFILVSNIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSS
Ga0209424_11691301	3300027539	Termite Gut	MLHFIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSEG
Ga0209424_12680801	3300027539	Termite Gut	MTGFRGLEVACLPLVPKFAGSNPAEAVGFLRAKKSSARL
Ga0209531_102984712	3300027558	Termite Gut	MGYVGFGGLGVACWPLVPKFAGSNPAEAVGFLRAKKYSARLP
Ga0209423_100113871	3300027670	Termite Gut	MNLGIGFGGLEAACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0209423_101324332	3300027670	Termite Gut	GGLEVAFWPLVPKFAGSNPTEAIGFLRAKKSSARLPSEGHVKNP
Ga0209423_101967311	3300027670	Termite Gut	FGGLEVACWPLVPKFADSHPAEAVGVFRAKKSSAHLSSEGK
Ga0209423_102042351	3300027670	Termite Gut	VLACWPLLPKFTGSNSAEAVGFLRAKKSSAQLTTEGK
Ga0209423_102101711	3300027670	Termite Gut	VYIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKK
Ga0209423_102187541	3300027670	Termite Gut	LLYLLTIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAK
Ga0209423_102236261	3300027670	Termite Gut	MIGFGGLEEACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0209423_103326791	3300027670	Termite Gut	MLNIGFGGLEVACWPLVPKFAGSNPAEAIGFLRAKKSSARLPSEG
Ga0209423_103894073	3300027670	Termite Gut	VQFTGFGGLEVACWPLVPKFMGSNPAEAVGFLRAKKSSARL
Ga0209423_104262261	3300027670	Termite Gut	HYFKGGFGGLEVACWPLVPKFAGSNPAEAIGFLRAKKSSAGLPSEGK
Ga0209423_104719901	3300027670	Termite Gut	IMIMLIGFGGLEVACWPLVPKFTGSNPAEVVGFLRAKKSSARLPSEGK
Ga0209628_100549473	3300027891	Termite Gut	MTSPTGFGGRGVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209628_100557611	3300027891	Termite Gut	VKEAASVVQCWPLVPKFAGSNPAEAVGFLRAKKSSAHFPSEGK
Ga0209628_100744421	3300027891	Termite Gut	MISKSDFGGLGVACWALVPKFTGTNPAEAIGFLRAKKSSARLSSEWK
Ga0209628_107778281	3300027891	Termite Gut	MDMVSGFGGLGVACWPLVPKFAGSNPAEAVGFLRAKKSSACLP
Ga0209628_113053361	3300027891	Termite Gut	MVVSGFGGLGVACWPLVPKYAGSNPAEAVGFLRAKKSSARLPSEG
Ga0209737_102853961	3300027904	Termite Gut	MGVACWPLVPKFAGSNPAEAVGFLRAKTSSARLPSEG
Ga0209737_106110451	3300027904	Termite Gut	VSLGVACWPLVPKFAGSNPAEAVGFLRAKKFSARLPSEG
Ga0209737_107709581	3300027904	Termite Gut	MNISGFGGLGVACWLLVPKFAGSNPAEAVGFLRAKKSSARL
Ga0209737_108232962	3300027904	Termite Gut	MSGFGGLEVACWPLVPKFAGSNPGEAVGFLRAKKSSARLPS
Ga0209737_110039011	3300027904	Termite Gut	VISDFGGLGVSCWPLVPKFVGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209737_110913631	3300027904	Termite Gut	MFSGFGGLGVTCWPLEPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0209737_113403031	3300027904	Termite Gut	LSGFGGLGVTCWPLVPKFAGSNPAEAVGFLRAKKSSARLRRGSK
Ga0209737_115207291	3300027904	Termite Gut	MFTSGFGGLGVARWPLGPKFAGSNPAEAVGFLRAKKSSARLPSEG
Ga0209737_116880991	3300027904	Termite Gut	MFYVIKLSRFGGLGVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0209627_11423542	3300027960	Termite Gut	MIYSGFGGLGVASWPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0209738_100034101	3300027966	Termite Gut	GFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKTSARLPLEGK
Ga0209738_100762611	3300027966	Termite Gut	MYDYRIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKK
Ga0209738_100902331	3300027966	Termite Gut	MLCGFDFSGLEVACWPLVPKFAGSNPAEAVGFLRAKKSS
Ga0209738_101157371	3300027966	Termite Gut	MTGFRGLEVACLPLVPKFAGSNPAEAVGFLRAKKSSARLPSKGK
Ga0209738_101888141	3300027966	Termite Gut	LMHDIGGLEVACWPLGPKFAGSIPAEAVGFLRAKKSSARLPSEGK
Ga0209738_101909581	3300027966	Termite Gut	MITGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSAHLPSEGK
Ga0209738_102256821	3300027966	Termite Gut	VFLYLYCVSFGGLDVACWPLVPKFAGSNPAEAVGFLRAKKSSARLP
Ga0209738_102392151	3300027966	Termite Gut	MIILHGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0209738_102528321	3300027966	Termite Gut	VYDCLTGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKS
Ga0209738_102989191	3300027966	Termite Gut	MQPFIGFGGLEVACRPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209738_103469202	3300027966	Termite Gut	MRGFGGLEVACLPLVTKFAGSHPVKAVGFLGQKKIL
Ga0209738_105326811	3300027966	Termite Gut	LDGYVDSIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAK
Ga0209738_105840731	3300027966	Termite Gut	LTGFGGLEVAFWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEG
Ga0209738_106190401	3300027966	Termite Gut	LIYREFIGFGGLEVACWPLVPKFAGSNPAEAVGFLRA
Ga0209629_100209428	3300027984	Termite Gut	GLGVACWPLVPKFAGSNPAEAVGFLRAKKSSACLLSEGK
Ga0209629_100522432	3300027984	Termite Gut	VVACWPLVPKFVGSNPAEAVGFLRAKKSSARHPSEGK
Ga0209629_100564471	3300027984	Termite Gut	MPIDAYSGFGGLGVACWPLEPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209629_101526023	3300027984	Termite Gut	MGFGGLGVACWPLVPKFAGSNPAEAVGFLRAKKSSARL
Ga0209629_101755611	3300027984	Termite Gut	MVPYRLQCWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209629_102999301	3300027984	Termite Gut	VVAWWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEG
Ga0209629_103011141	3300027984	Termite Gut	GFGGLGVACWPLVPKFAGSNPAEAVGFLRAKTSSACLPSEGK
Ga0209629_104431371	3300027984	Termite Gut	MNKSGFDGLGVACWPLVPKFAGSNPVEAVGFLRAKKSSARLPSVG
Ga0209629_104870061	3300027984	Termite Gut	NELKQHKPGFGDLGVACWPLAPKFAGSNLAEAVRFLRAKKSSSRLPAEGK
Ga0209629_106546561	3300027984	Termite Gut	VEADCGFGGLGVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209629_106730681	3300027984	Termite Gut	SGFGGLGLACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0209629_108220701	3300027984	Termite Gut	LQSGFGGLGVACWPLVPKFAGSNPAEAVGFLRGEKILS
Ga0209629_109626051	3300027984	Termite Gut	MCRFGGLGVACWPLVPKFGGSNPAEAVGFLRAKKSSARLPSEG
Ga0209629_110099321	3300027984	Termite Gut	VACWPLVPKFAGSNLAEAVGFLRAKKSSARLPSEGK
Ga0209629_110183441	3300027984	Termite Gut	MSLQHTQSGFGGLGVVCWPLVPKFAGSNPAEAVGFLRAKK
Ga0268261_1000401210	3300028325	Termite Gut	GGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_100318636	3300028325	Termite Gut	MYIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0268261_100429092	3300028325	Termite Gut	MVTYDIIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAEKSSARLPSEGK
Ga0268261_100442523	3300028325	Termite Gut	MGIGFGGLEVAGWSLVPKFAGSDPAEAVGFLRAKKSSARLPSEGK
Ga0268261_100587783	3300028325	Termite Gut	MVCKGIDFSGLEVACWPLVPKFAGSNLAEAVGFLRAKKSSARLPSEGK
Ga0268261_101268911	3300028325	Termite Gut	MIGFGGIEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEG
Ga0268261_101457611	3300028325	Termite Gut	MLIGGFGGLEVACWPLVPKFEGSNPAEAVGFLSAKKSSARLPSEGK
Ga0268261_101667421	3300028325	Termite Gut	MIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLLSEGK
Ga0268261_101875141	3300028325	Termite Gut	MEGTGFGGLEVACCPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0268261_101935162	3300028325	Termite Gut	PNYRRIGLGGLEVACWPLVPKFVGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_102528551	3300028325	Termite Gut	MSYIYIYIYIYKNGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLLSERK
Ga0268261_103174761	3300028325	Termite Gut	MLRFVTCDLYVYLIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAK
Ga0268261_103399101	3300028325	Termite Gut	MIFYYYITGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0268261_103653672	3300028325	Termite Gut	MIGFGGLEVVCWPLVPKFAGSNPAEAVGFLRAKKSSAHLP
Ga0268261_103870452	3300028325	Termite Gut	SIPTQGFDGLEVACWPLVPKFAGSNLAEAVRSLRAKKSSARLPSEGK
Ga0268261_104095261	3300028325	Termite Gut	IGFGGLEVECWPLVPKFAGSNPAKAVGFLRAKKFSARLPSEGK
Ga0268261_104125581	3300028325	Termite Gut	EVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_104255531	3300028325	Termite Gut	MTIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSA
Ga0268261_104595571	3300028325	Termite Gut	MIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPLEGK
Ga0268261_104734912	3300028325	Termite Gut	MEQNGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0268261_105122712	3300028325	Termite Gut	MFCILIIFGFGGLEVACWPLVPKLAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_105171651	3300028325	Termite Gut	MIGFGGLEEACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEG
Ga0268261_105234381	3300028325	Termite Gut	MYYVYIGFGALEVACWPLVPKFAGSNPAEAVGFLRAKKSSA
Ga0268261_105618821	3300028325	Termite Gut	EVACWPLVPKFTGSNPAEAVGFLRAKKSSARLLSEGK
Ga0268261_105624891	3300028325	Termite Gut	LNCMLMIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSS
Ga0268261_105877801	3300028325	Termite Gut	IGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_106690251	3300028325	Termite Gut	MFYINFCYITQNGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSE
Ga0268261_107229851	3300028325	Termite Gut	MYIILNGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPSEGK
Ga0268261_107453951	3300028325	Termite Gut	MIGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSSARLPS
Ga0268262_103540881	3300028327	Termite Gut	MTGFGGLEVACWPLVPKFAGSNPAEAVGFLRAKKSTARLPSEGK
Ga0268262_104510331	3300028327	Termite Gut	MLLLIGFVGLEVVCWPLVPKLAGSNPAEAVGFLRAKKPSRLSSEGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087860

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences