NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087866

Metagenome Family F087866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087866
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 50 residues
Representative Sequence VEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVV
Number of Associated Samples 10
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.91 %
% of genes from short scaffolds (< 2000 bps) 0.91 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 68.00%    β-sheet: 0.00%    Coil/Unstructured: 32.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF14806Coatomer_b_Cpla 1.82
PF07679I-set 1.82


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002175|JGI20166J26741_11589927Not Available1305Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001544Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300002125Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4Host-AssociatedOpen in IMG/M
3300002127Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3Host-AssociatedOpen in IMG/M
3300002175Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5Host-AssociatedOpen in IMG/M
3300002185Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1Host-AssociatedOpen in IMG/M
3300027558Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)Host-AssociatedOpen in IMG/M
3300027891Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)Host-AssociatedOpen in IMG/M
3300027904Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027960Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)Host-AssociatedOpen in IMG/M
3300027984Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1007109113300001544Termite GutMKCQLDTTEVFITDLIACSTRFGHHYAHHQELKSIIQWLMPVV
JGI20163J15578_1011733413300001544Termite GutVPTEHIQTLLTEIKCQLEATEVFIAVLIACSTRFGHHYAHHQELKSIIQWLLPVVFRA
JGI20163J15578_1011768453300001544Termite GutVEIKYLLDATEVFIADLIARSTRFGHHYAHHQELKSIIQWLLPVVFRAV
JGI20163J15578_1011840833300001544Termite GutMEIKCQLDASEVFTADFIACSTRFGHHYAHHQELKSIIQWLLPVVF
JGI20163J15578_1023683723300001544Termite GutVGIQCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFGAVV
JGI20163J15578_1037209213300001544Termite GutVEIKCQLDATEIFIADLIACSTRFGHHYAHHQELKSIIQWLL
JGI20163J15578_1060738523300001544Termite GutMVDRNSQYVEIKCQLDATEVLIADLTACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
JGI20163J15578_1065462923300001544Termite GutVEIKCQLDATEVFIAGLIVCSTRFGHHYAHHQELKSIIQWLLPVVFGAVVFKLL
JGI20163J15578_1075536513300001544Termite GutVEIKCQLDATEAFIADLIACSTRFGHHYAHHQELKSIILWLLPVVFRAVVFN
JGI20165J26630_1036254913300002125Termite GutVEIKCQLDAIEVFIAELIACSTRFRHHYAHHQELKSIIRCLLPVVFRAVVFK
JGI20165J26630_1068101833300002125Termite GutVEIKCQLDATEVFIADLIAYSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVW
JGI20164J26629_1029429613300002127Termite GutVEIKCQLDATAVFIAHLIACSTRFGHHYAHHQELKSIIQWLL
JGI20164J26629_1036035523300002127Termite GutMKCQLDTTEVFITDLIACSTRFGHHYAHHQELKSIIQWLMPVVFHVRFTG
JGI20164J26629_1052110713300002127Termite GutVEIKCQIDATEVFIADLIACSTCFGYHYAHHQELKSIILWLLPVVFGAVVFKL
JGI20166J26741_1001265913300002175Termite GutMKCQLDAAEVFIAVLIACSTCFGHHYAHHQELKSIILWLLPVVFRAV
JGI20166J26741_1007354953300002175Termite GutMPTDGTEDFIAVLIACSTCFGHHYAHHQELKSIIQWLLRVVFCA
JGI20166J26741_1013219913300002175Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFQVA
JGI20166J26741_1052911513300002175Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRA
JGI20166J26741_1073772633300002175Termite GutMPFYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQ
JGI20166J26741_1076120413300002175Termite GutVEIKCQLDVTEVFIADLIACSTRFGHHYAHHQELKSIIQWLL
JGI20166J26741_1078689413300002175Termite GutVEIKCQLDATGVFIADRIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVV
JGI20166J26741_1148600433300002175Termite GutMKAYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
JGI20166J26741_1148954233300002175Termite GutMKCQLDTTEVFITDLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
JGI20166J26741_1151605613300002175Termite GutMKVCYFYVEIKCQLDATEFFIADLIACSTRFGHHYAHHQELKSIIQWLLPV
JGI20166J26741_1155055813300002175Termite GutVEIKCQLDATEVFIADLIARSTRFGHHCAHHQELKSIIQWLLPVVFR
JGI20166J26741_1156549013300002175Termite GutMEIKCQLDASEVFTADFIACSTRFGHHYAHHQELKSIIQWLLPVVFRAV
JGI20166J26741_1158992733300002175Termite GutVEIKCQLDGTEVFIADLIACSTRFGHHYAHHQELKSIIQWLLP
JGI20166J26741_1163710643300002175Termite GutMSITSTCVEIKCQLDLTEVFIADLIARSTRFGHHYAHHQELKSIIQWLL
JGI20166J26741_1182456133300002175Termite GutMEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
JGI20166J26741_1185181813300002175Termite GutVEIKCHLDATEVFIADLIACSTRFGHHYAHHQELKSIIQ
JGI20166J26741_1185476213300002175Termite GutVEIKYQLDGTEVFIAVLIACSTRFGHHYAHHQELKSIIQWLLPVVFR
JGI20166J26741_1196367513300002175Termite GutVEIKCQLDAAEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFK
JGI20166J26741_1199207723300002175Termite GutMPTDATEVSIADLIACSTRFGHHYAHHQELKSIIQWLLRVVF
JGI20166J26741_1204302013300002175Termite GutVEIKYQLGATEVSIADLIACSTRFGHHYAHHQELKSIIQWLLPVVF
JGI20166J26741_1205554613300002175Termite GutVEIKCQLDGTEVFIADLIACSTRFGHHYAHHQELKSIKQWLL
JGI20166J26741_1216652723300002175Termite GutVEIKCQLDAKEVFIADLIACSTRFGHHYAHHQELKSIKQWLLLVVFRAVKM*
JGI20166J26741_1218128523300002175Termite GutMHLDCWLQYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLL
JGI20166J26741_1223451713300002175Termite GutVEIKCQLDATEVFIADLIAFSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKL
JGI20166J26741_1225653613300002175Termite GutVEIKCQLDATEVFIAELIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
JGI20166J26741_1227125113300002175Termite GutVEIKCQIDATEVFIADLIACSTCFGYHYAHHQELKSIILWLLPVVFGAVVFKLLVWCG
JGI20163J26743_1055579813300002185Termite GutVEIKCQLDATEVFIAELIACSTRFGHHYAHHQELKSIIQWLLPVVFRAV
JGI20163J26743_1059448323300002185Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPV
JGI20163J26743_1092040723300002185Termite GutMPTDATEVFIADLIARSTRFGHHYAHHQELKSIIQWLLSVVFRTV
JGI20163J26743_1096347833300002185Termite GutMPTDATEVFIADLIARSTRFGHHCAHHQELKSIIQWLLPVVFR
JGI20163J26743_1129065613300002185Termite GutVGIQCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFGAVVFKLLVW
JGI20163J26743_1131452413300002185Termite GutVEIKCQLDAIEVFIAELIACSTRFRHHYAHHQELKSIIRCLLPVVFRAVVFKLLVWCG
JGI20163J26743_1135480013300002185Termite GutMEIKCQLDASEVFTADFIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVV
JGI20163J26743_1141285623300002185Termite GutMKAYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVW
JGI20163J26743_1146660233300002185Termite GutMPIDATEVFTADLIARSTRFGHHCAHHQELKSIIQWLLPVVFR
Ga0209531_1009230913300027558Termite GutVEIKCQLDATEVFTAVLIACSTRFGHHYAHHQELKSIIQWLLPVVFRA
Ga0209628_1001944013300027891Termite GutVEIKCQLDATEVFIEDLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVW
Ga0209628_1018129223300027891Termite GutATGVFIADLIACSTCFGHHYAHHQELKSIILWLLPVVFRAVVFQVAGLVWS
Ga0209628_1018642613300027891Termite GutVEIKCQLDATEVFIADFIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCG
Ga0209628_1021011813300027891Termite GutVEIKYLLDATEVFIADLIARSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAE
Ga0209628_1026093513300027891Termite GutVEVKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLV
Ga0209628_1031193713300027891Termite GutMPFYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQW
Ga0209628_1035020023300027891Termite GutMFNRYVEMKCQLDTTEVFIADLIACSTCFGHHYAHHQELKSIIQWLLPVV
Ga0209628_1035879623300027891Termite GutMKAYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPV
Ga0209628_1044417713300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIKQWLLLQY
Ga0209628_1047245713300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAEGYVS
Ga0209628_1052558713300027891Termite GutVEIKSQLDATEVFIAELIACSTRFGHHYAHHQELKSIIQWLLSVVFGAVVSEHLKWSVRI
Ga0209628_1054438613300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAEGYV
Ga0209628_1057034613300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGA
Ga0209628_1063887523300027891Termite GutDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFPAVVFQVAGLVWS
Ga0209628_1080925013300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIILWLLPVVFRAVVFQVAGLVW
Ga0209628_1120773613300027891Termite GutVEIKCQLDATEFFIADLIACSTRFGHHYAHHQELKSIIQWLL
Ga0209628_1127426613300027891Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLP
Ga0209737_1002966243300027904Termite GutVEIKCQLDATEVFIAELIACSTRFGHHYAHHQELKSIIKWLLP
Ga0209737_1026971113300027904Termite GutVEIKCQLDATEVFIADLFACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAE
Ga0209737_1029020413300027904Termite GutVEIKCQLDGTEVFIADLIACSTRFGHHYAHHQELKSIKQWLLV
Ga0209737_1031605513300027904Termite GutMKAYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAEGY
Ga0209737_1035299013300027904Termite GutVEIKCQLDATEVFIADLTACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFQVAGLVWG
Ga0209737_1040394613300027904Termite GutMKVCYFYVEIKCQLDATEFFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVF
Ga0209737_1045668413300027904Termite GutVEIKCQLDATEVLIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFK
Ga0209737_1046928913300027904Termite GutMVDRNSQYVEIKCQLDATEVLIADLTACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVF
Ga0209737_1049591213300027904Termite GutVEIKCQLDGTEVFIADLIACSTRFGHHYAHHQELK
Ga0209737_1050600513300027904Termite GutVEIKCQLDATEVFIPDLIVCSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVW
Ga0209737_1054827313300027904Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVLRAVVL
Ga0209737_1067863813300027904Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQ
Ga0209737_1077834513300027904Termite GutVEIKCQLDATDVFIADLIACSTCFGHHYAHHQELKSIILWLLPVVFGVV
Ga0209737_1086749723300027904Termite GutMKGYVEIKCQLDAKEVFIADLIACSTRFGHHHAHHQEPKSIIQ
Ga0209737_1094900413300027904Termite GutVETKCQLDATEVFIADPIACSTRFGHHYAHHQELKSIIQWLLPVVFRAV
Ga0209737_1097778313300027904Termite GutMTIEETWLYHVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVK
Ga0209737_1127868123300027904Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKL
Ga0209737_1171562413300027904Termite GutVEIKCQLDATEAFIADLIACSTRFGHHYAHHQELKSIILWLLPVVFRAVVFNLLVWC
Ga0209737_1175610813300027904Termite GutVEIKCQLDATGVFIADRIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAE
Ga0209627_100486013300027960Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFQVAG
Ga0209629_1009209213300027984Termite GutVEIKCQLDAIEVFIAELIACSTRFGHHYAHHQELKSIIRCLLPVVFRAVVFKLLV
Ga0209629_1010921323300027984Termite GutVEIKCQLDTTEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVV
Ga0209629_1011523013300027984Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLRVVF
Ga0209629_1013928433300027984Termite GutVEIKYLLDATEVFIADLIARSTRFGHHYAHHQELKSIIQWLLPVVFRAVVF
Ga0209629_1016072623300027984Termite GutVEIKRQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVWCGAEGYV
Ga0209629_1017155013300027984Termite GutVEIKCQLDATKVFIADLIACSTRFGHHYAHHQELKSIIQWLLP
Ga0209629_1019270213300027984Termite GutMPFYVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWL
Ga0209629_1021105813300027984Termite GutVEIKCQLDATEVFTADLIARSTRFGHHCAHHQELKSIIQWLLPVVF
Ga0209629_1047467613300027984Termite GutVEIKCQLDGTEVFIAVLIACSTCFGHHYAHHQELKSIIHWLLSAVFGAVV
Ga0209629_1051790613300027984Termite GutVEIKCHLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFGAVVFKLLVWCGAEGYVS
Ga0209629_1054936813300027984Termite GutVEIKCQLVATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPV
Ga0209629_1057530013300027984Termite GutMKGYVEIKCQLDAKEVFIADLIACSTRFGHHHAHHQEPKSIIQWLL
Ga0209629_1058266623300027984Termite GutVEIKCQLDATDVFIADLIACSTCFGHHYAHHQELKRIILWLLPVVFGVVVF
Ga0209629_1059698433300027984Termite GutVEIKYQLDGTEVFIAVLIACSTRFGHHYAHHQELKSIIQWLLPVVF
Ga0209629_1066908013300027984Termite GutVEIKCQLDAAEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLLVW
Ga0209629_1072740413300027984Termite GutVEIKCQLDATEVFIAGLIVCSTCFGHHYAHHQELKSIIQWLLPVVF
Ga0209629_1074721013300027984Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVV
Ga0209629_1075558213300027984Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQW
Ga0209629_1084960113300027984Termite GutVEIKCHLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLLVVFRSVVFKL
Ga0209629_1091028413300027984Termite GutVEIKCQLDATEVFIAELIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVLKLLV
Ga0209629_1091651613300027984Termite GutVEIKCQLDATGVFIADRIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFKLL
Ga0209629_1094039323300027984Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQWLLPVVFRAVVFQVAGL
Ga0209629_1102978513300027984Termite GutVEIKCQLDATEVFIADLIACSTRFGHHYAHHQELKSIIQRLLSVVFCA

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Biomedical Sciences Research Center "Alexander Fleming"
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