NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087890

Metagenome Family F087890

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087890
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 47 residues
Representative Sequence MKKFLKDKSGPIMMGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRM
Number of Associated Samples 85
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.64 %
% of genes near scaffold ends (potentially truncated) 18.18 %
% of genes from short scaffolds (< 2000 bps) 86.36 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.455 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(48.182 % of family members)
Environment Ontology (ENVO) Unclassified
(80.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.636 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 56.25%    β-sheet: 0.00%    Coil/Unstructured: 43.75%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00462Glutaredoxin 2.73
PF01068DNA_ligase_A_M 0.91
PF00166Cpn10 0.91
PF12684DUF3799 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.91
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 0.91
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.45 %
All OrganismsrootAll Organisms34.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10075435All Organisms → Viruses → Predicted Viral1525Open in IMG/M
3300001450|JGI24006J15134_10145866Not Available782Open in IMG/M
3300001450|JGI24006J15134_10182887Not Available655Open in IMG/M
3300001943|GOS2226_1004332All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157826Open in IMG/M
3300005239|Ga0073579_1169863Not Available10412Open in IMG/M
3300005821|Ga0078746_1046673Not Available936Open in IMG/M
3300005941|Ga0070743_10231982Not Available602Open in IMG/M
3300006029|Ga0075466_1153406Not Available591Open in IMG/M
3300006735|Ga0098038_1034149Not Available1889Open in IMG/M
3300006735|Ga0098038_1127466Not Available861Open in IMG/M
3300006736|Ga0098033_1102141Not Available815Open in IMG/M
3300006736|Ga0098033_1191610Not Available567Open in IMG/M
3300006738|Ga0098035_1152463Not Available785Open in IMG/M
3300006738|Ga0098035_1230774Not Available612Open in IMG/M
3300006750|Ga0098058_1061925All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1042Open in IMG/M
3300006751|Ga0098040_1140617Not Available716Open in IMG/M
3300006752|Ga0098048_1200675Not Available588Open in IMG/M
3300006753|Ga0098039_1180342Not Available718Open in IMG/M
3300006754|Ga0098044_1218454Not Available745Open in IMG/M
3300006754|Ga0098044_1385971Not Available528Open in IMG/M
3300006789|Ga0098054_1194334Not Available741Open in IMG/M
3300006793|Ga0098055_1178280Not Available812Open in IMG/M
3300006793|Ga0098055_1396711Not Available511Open in IMG/M
3300006920|Ga0070748_1295665Not Available576Open in IMG/M
3300006920|Ga0070748_1335926Not Available534Open in IMG/M
3300006921|Ga0098060_1027136Not Available1756Open in IMG/M
3300006921|Ga0098060_1031783All Organisms → Viruses → Predicted Viral1604Open in IMG/M
3300006921|Ga0098060_1131226Not Available700Open in IMG/M
3300006926|Ga0098057_1015951All Organisms → Viruses → Predicted Viral1907Open in IMG/M
3300006927|Ga0098034_1089701Not Available884Open in IMG/M
3300006927|Ga0098034_1201615Not Available555Open in IMG/M
3300006929|Ga0098036_1046633All Organisms → Viruses → Predicted Viral1350Open in IMG/M
3300006929|Ga0098036_1243491Not Available544Open in IMG/M
3300006929|Ga0098036_1281552Not Available501Open in IMG/M
3300007276|Ga0070747_1164298Not Available794Open in IMG/M
3300007276|Ga0070747_1337161Not Available516Open in IMG/M
3300007345|Ga0070752_1135641All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571022Open in IMG/M
3300007715|Ga0102827_1147413Not Available541Open in IMG/M
3300007900|Ga0111031_1098624All Organisms → Viruses → Predicted Viral1657Open in IMG/M
3300007962|Ga0102907_1008183All Organisms → Viruses → Predicted Viral3155Open in IMG/M
3300008050|Ga0098052_1072871All Organisms → Viruses → Predicted Viral1435Open in IMG/M
3300008219|Ga0114905_1139509Not Available815Open in IMG/M
3300008220|Ga0114910_1151358Not Available660Open in IMG/M
3300009080|Ga0102815_10667059Not Available587Open in IMG/M
3300009086|Ga0102812_10429599All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157720Open in IMG/M
3300009193|Ga0115551_1056168All Organisms → Viruses → Predicted Viral1917Open in IMG/M
3300009425|Ga0114997_10773679Not Available500Open in IMG/M
3300009593|Ga0115011_12077704Not Available520Open in IMG/M
3300009605|Ga0114906_1273430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium543Open in IMG/M
3300010149|Ga0098049_1021050All Organisms → Viruses → Predicted Viral2149Open in IMG/M
3300010151|Ga0098061_1268074Not Available592Open in IMG/M
3300010151|Ga0098061_1316091Not Available535Open in IMG/M
3300011128|Ga0151669_116225Not Available580Open in IMG/M
3300011128|Ga0151669_120930Not Available763Open in IMG/M
3300011128|Ga0151669_125916Not Available650Open in IMG/M
3300011258|Ga0151677_1096130Not Available1034Open in IMG/M
3300017705|Ga0181372_1052576Not Available688Open in IMG/M
3300017713|Ga0181391_1053156All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157952Open in IMG/M
3300017718|Ga0181375_1054404Not Available663Open in IMG/M
3300017724|Ga0181388_1120933Not Available623Open in IMG/M
3300017745|Ga0181427_1134136Not Available602Open in IMG/M
3300017748|Ga0181393_1025332All Organisms → Viruses → Predicted Viral1709Open in IMG/M
3300017751|Ga0187219_1197640Not Available557Open in IMG/M
3300017753|Ga0181407_1089575Not Available780Open in IMG/M
3300017768|Ga0187220_1074831Not Available1020Open in IMG/M
3300017769|Ga0187221_1203746Not Available570Open in IMG/M
3300017783|Ga0181379_1028774All Organisms → Viruses → Predicted Viral2212Open in IMG/M
3300020165|Ga0206125_10035104All Organisms → Viruses → Predicted Viral2654Open in IMG/M
3300020165|Ga0206125_10113840All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300020185|Ga0206131_10172257All Organisms → Viruses → Predicted Viral1101Open in IMG/M
3300020187|Ga0206130_10300451Not Available694Open in IMG/M
3300020421|Ga0211653_10371013Not Available617Open in IMG/M
3300021957|Ga0222717_10013617Not Available5583Open in IMG/M
3300021959|Ga0222716_10018223All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1575228Open in IMG/M
3300022053|Ga0212030_1029231All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157763Open in IMG/M
3300022072|Ga0196889_1010507All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1572036Open in IMG/M
3300022072|Ga0196889_1017958All Organisms → Viruses → Predicted Viral1488Open in IMG/M
3300022169|Ga0196903_1012826All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571033Open in IMG/M
(restricted) 3300022920|Ga0233426_10074533All Organisms → Viruses → Predicted Viral1551Open in IMG/M
3300024344|Ga0209992_10089506All Organisms → Viruses → Predicted Viral1394Open in IMG/M
3300025066|Ga0208012_1000289Not Available19121Open in IMG/M
3300025066|Ga0208012_1001727All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1575638Open in IMG/M
3300025066|Ga0208012_1020804All Organisms → Viruses → Predicted Viral1062Open in IMG/M
3300025078|Ga0208668_1019490All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571385Open in IMG/M
3300025083|Ga0208791_1081484Not Available523Open in IMG/M
3300025084|Ga0208298_1003696All Organisms → Viruses → Predicted Viral4639Open in IMG/M
3300025084|Ga0208298_1070521Not Available658Open in IMG/M
3300025086|Ga0208157_1011759Not Available2870Open in IMG/M
3300025098|Ga0208434_1019323All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1571726Open in IMG/M
3300025101|Ga0208159_1101818Not Available510Open in IMG/M
3300025108|Ga0208793_1084811Not Available908Open in IMG/M
3300025114|Ga0208433_1111907Not Available669Open in IMG/M
3300025133|Ga0208299_1033151All Organisms → Viruses → Predicted Viral2124Open in IMG/M
3300025133|Ga0208299_1035428Not Available2029Open in IMG/M
3300025133|Ga0208299_1202751Not Available587Open in IMG/M
3300025138|Ga0209634_1132817All Organisms → Viruses → Predicted Viral1043Open in IMG/M
3300025138|Ga0209634_1188526Not Available801Open in IMG/M
3300025168|Ga0209337_1253732Not Available671Open in IMG/M
3300025264|Ga0208029_1063653Not Available736Open in IMG/M
3300025652|Ga0208134_1080929Not Available940Open in IMG/M
3300027233|Ga0208678_1073961Not Available675Open in IMG/M
3300027251|Ga0208809_1035833Not Available884Open in IMG/M
3300027753|Ga0208305_10187023Not Available749Open in IMG/M
3300027906|Ga0209404_11271449Not Available507Open in IMG/M
3300028284|Ga0257120_1066207Not Available869Open in IMG/M
3300029787|Ga0183757_1015513Not Available1969Open in IMG/M
3300029787|Ga0183757_1030837All Organisms → Viruses → Predicted Viral1128Open in IMG/M
3300031143|Ga0308025_1009327All Organisms → Viruses → Predicted Viral4068Open in IMG/M
3300031519|Ga0307488_10293612All Organisms → Viruses → Predicted Viral1050Open in IMG/M
3300031631|Ga0307987_1036443All Organisms → Viruses → Predicted Viral1651Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine48.18%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.00%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater8.18%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine6.36%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean3.64%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine3.64%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.64%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.73%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.82%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.82%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.91%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.91%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.91%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.91%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.91%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.91%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001943Marine microbial communities from Cape May, New Jersey, USA - GS010EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005821Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf, PM1EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007715Estuarine microbial communities from the Columbia River estuary - metaG S.751EnvironmentalOpen in IMG/M
3300007900Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf. Combined Assembly of MM1PM1EnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300011128Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.02EnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300027233Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027251Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027753Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028284Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031631Marine microbial communities from Ellis Fjord, Antarctic Ocean - #181EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007543523300000101MarineMKKFLKDKSGPIMVGVGAILLTSGLMGVEGAITFAIGIILMVEGVDRM*
JGI24006J15134_1014586623300001450MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRM*
JGI24006J15134_1018288723300001450MarineMKKFLKDKSGPIMVGIGAILLVSDLMGIEGVITFAVGIILMVEGIDRM*
GOS2226_100433213300001943MarineMVGVGAILLTSGLMGVEGAITFAIGIILMVEGVDRM*
Ga0073579_116986373300005239MarineMKKFLKDKSGAIMLGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0078746_104667323300005821Marine SedimentMKKFLKDKSGPIMMGIGAILLVSDLMGVEGLITFAVGIILIVEGVDRM*
Ga0070743_1023198213300005941EstuarineMKKFLKDKSGPIMVGMGAILLTSGLMGVEGAITFAIGIILMVEG
Ga0075466_115340623300006029AqueousMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRI*
Ga0098038_103414963300006735MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRM*
Ga0098038_112746623300006735MarineMKKFLKDKSGAIMLGVGSILLISDLMGVEGAITLAVGIILIVEGVDRI*
Ga0098033_110214123300006736MarineMKKFLKEKNGIIMIGLGSTILISDLIGIDSVLTAVVGIGIILIVEGVDRI*
Ga0098033_119161013300006736MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVNRM*
Ga0098035_115246323300006738MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM*
Ga0098035_123077423300006738MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVDRL*
Ga0098058_106192523300006750MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVDRM*
Ga0098040_114061733300006751MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGVITFAVGIILIVEGIDRM*
Ga0098048_120067523300006752MarineMKKFLKDKSGAIMLGIGATLLVSDLMGIEGVITFAVGIILIVEGVDRM*
Ga0098039_118034223300006753MarineMKKFLKDKSGPIMMGIGVVLLVSDLMGIEGIITFAVGIILIVEGVDRM*
Ga0098044_121845423300006754MarineMKKFLKDKSGAIMLGVGAILLISDLMGVEGIITFAVGIILIVEGIDRM*
Ga0098044_138597113300006754MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAV
Ga0098054_119433423300006789MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGAITFAVGIILIVEGIDRM*
Ga0098055_117828023300006793MarineMKEFLKEKSGAIMLGVGAILLISDLMGVEGIITFAVGIILIVEGVDRM*
Ga0098055_139671123300006793MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0070748_129566533300006920AqueousMKKFLKDKSGPIMMGIGAVLLVSDLMGIEGIITFAVGIILIVEGVDRI*
Ga0070748_133592623300006920AqueousMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILMVEGVDRM*
Ga0098060_102713613300006921MarineMKKFLKDKSGPIMMGVGAILLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0098060_103178333300006921MarineMKKFLKDKSGVIMLGVGSILLISDLMGVEGAITFAVGIILMVEGVDRI*
Ga0098060_113122623300006921MarineMKKFLKDKSGPIMMGIGTILLVSDLMGVEGVITFAVGIILIVEGIDRM*
Ga0098057_101595183300006926MarineMKNFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM*
Ga0098034_108970123300006927MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIVLIVEGIDRM*
Ga0098034_120161523300006927MarineMKKFLKDKSGPIMVGIGAILLTSSLMGIEGAITFAIGIILMVEGVDRM*
Ga0098036_104663343300006929MarineMKKFLKDKSGVIMLSVGSILLISDLMGVEGAITFAVGIILMVEGVDRI*
Ga0098036_124349123300006929MarineMKKFLKDKSGAIMLGVGAILLISDLIGVEGIITFAVGIILIVEGIDRM*
Ga0098036_128155223300006929MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRI*
Ga0070747_116429823300007276AqueousMKKFLKEKSGPIMVGIGAILLVSDLMGIEGVITFAVGIILIVEGVDRI*
Ga0070747_133716113300007276AqueousSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVDRM*
Ga0070752_113564123300007345AqueousMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILMVEGVDRM*
Ga0102827_114741313300007715EstuarineMKKFLKDKSGPIMVGMGAILLTSGLMGVEGAITFAIGIILMVEGVYRM*
Ga0111031_109862443300007900Marine SedimentMKKFLKDKSGPIMVGVGAILLTSGLMGAEGAITFAIGIILMVEGVDRM*
Ga0102907_100818333300007962EstuarineMKKFLKDKSGPIMVGIGAILLTSGLMGVEGAITFAIGIILMVEGVDRM*
Ga0098052_107287113300008050MarineFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM*
Ga0114905_113950923300008219Deep OceanMKKFLKEKSGPIMVGVGAILLVSDLMGVEGVITFAVGIILIVEGVDRI*
Ga0114910_115135823300008220Deep OceanMKKFLKDKSGPIMVGIGAILLVSDLMGIEGVITFAVGIILIVEGVDRI*
Ga0102815_1066705913300009080EstuarineMKRFLKDKSGPIMVGMGAILLTSGLMGVEGAITFAIGIILMVEGVDRM*
Ga0102812_1042959913300009086EstuarinePIMVGMGAILLTSGLMGVEGAITFAIGIILMVEGVDRM*
Ga0115551_105616883300009193Pelagic MarineMKKFLKDKSGPIMMGIGAVLLVSDLMGVEGIITFAVGIILIVEGVDR
Ga0114997_1077367923300009425MarineMKKFLKDKSGPIMMGIGAILLVGDLMGIEGIITFAVGIILIVEGVDRM*
Ga0115011_1207770413300009593MarineKKFFKEKSGAIMMVLGAVLLAADLAGVEGAITFAVAIVLIVEGTSRM*
Ga0114906_127343013300009605Deep OceanMKKFLKDKSGAIMLGIGATLLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0098049_102105043300010149MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0098061_126807413300010151MarineIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM*
Ga0098061_131609123300010151MarineMKKFLKDKSGPIMMGIGAILLVGDLMGVEGIITFAVGIILIVEGVDRL*
Ga0151669_11622523300011128MarineMKKFLKDKSGVIMLGVGSILLLSDLMGVEGEITFAV
Ga0151669_12093023300011128MarineMKKFLKDKSGAIMLGIGAMLLVSDLMGVEGVITFAVGIILIVEGVDRM*
Ga0151669_12591633300011128MarineMKKFLKDKSGVIMLGVGSILLISDLMGVEGAITFAVGVILMVEGVDRI*
Ga0151677_109613033300011258MarineMKKFLKDKSGAIMLGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRI*
Ga0181372_105257613300017705MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFTVGIILIVEG
Ga0181391_105315623300017713SeawaterMGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0181375_105440423300017718MarineMKKFLKDKSGPIMMGIGAMLLVSDLMGVEGIITFAVGIILIVEGIDRM
Ga0181388_112093323300017724SeawaterMKKFLKDKSGPIMMGIGSILLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0181427_113413623300017745SeawaterMKKFLKDKSGPIMMGIGVILLVSDLMGVEGLIVFAVGIILIVEGADRM
Ga0181393_102533223300017748SeawaterMKKFLKDKSGPIMMGVGAILLVSDLMGVEGVITFAVGIILMVEGVDRM
Ga0187219_119764013300017751SeawaterMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILMVEGVDRM
Ga0181407_108957523300017753SeawaterMKKFLKDKSGPIMMGIGVILLVSDLMGIEGLIVFAVGIILIVEGADRM
Ga0187220_107483123300017768SeawaterMKKFLKDKSGAIMLGIGATLLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0187221_120374623300017769SeawaterMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITLAVGIILIVEGVDRM
Ga0181379_102877433300017783SeawaterMKKFLKDKSGPIMMGVGAILLVSDLMGVEGAITFAVGIILIVEGVDRM
Ga0206125_1003510483300020165SeawaterMKKFLKDKSGPIMVGVGAILLTSGLMGVEGAITFAIGIILMVEGVDRM
Ga0206125_1011384033300020165SeawaterKSGPIMVGVGAILLTSGLMGVEGAITFAIGIILMVEGVDRM
Ga0206131_1017225723300020185SeawaterMKKFLKDKSGPIMMGVGAILLVSDLMGVEGIITFAVGIILMVEGVDRM
Ga0206130_1030045113300020187SeawaterMKKFLKDKSGPIMVGVGAILLTSGLMGVEGAITFAIGVILMVEGVDRM
Ga0211653_1037101313300020421MarineSGAIMLGIGATLLVSDLMGIEGVITFAVGIILIVEGVDRM
Ga0222717_1001361783300021957Estuarine WaterMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILMVEGVDRM
Ga0222716_10018223113300021959Estuarine WaterMKKFLKDKSGPIMVGMGAILLTSGLMGVEGAITFAIGIILMVEGVDRM
Ga0212030_102923123300022053AqueousMKKFLKDKSGPIMMGVGAILLVSDLMGVEGVITFAVGIILIVEGVDRI
Ga0196889_101050713300022072AqueousGEYQNNMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILMVEGVDRM
Ga0196889_101795833300022072AqueousMKKFLKDKSGPIMMGIGAVLLVSDLMGIEGIITFAVGIILIVEGVDRI
Ga0196903_101282633300022169AqueousMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRI
(restricted) Ga0233426_1007453323300022920SeawaterMKKFLKDKSGPIMVGIGAILLTSGLMGIEGAIPFAIGIILMVEGVDRM
Ga0209992_1008950643300024344Deep SubsurfaceMKKFLKDKSGAIMLGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0208012_1000289183300025066MarineMKKFLKDKSGPIMMGIGAMLLVGDLMGVEGIITFAVGIILIVEGVDRL
Ga0208012_1001727103300025066MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVDRM
Ga0208012_102080423300025066MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM
Ga0208668_101949023300025078MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGIITFAVGIILIVEGVDRL
Ga0208791_108148423300025083MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0208298_100369673300025084MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRM
Ga0208298_107052123300025084MarineMKKFLKDKSGPIMMGIGAILLVSDLVGVEGIITFAVGIILIVEGVDRL
Ga0208157_101175973300025086MarineMKKFLKDKSGAIMLGVGSILLISDLMGVEGAITLAVGIILIVEGVDRI
Ga0208434_101932343300025098MarineMKKFLKDKSGPIMMGIGAILLVSDLMGIEGVITFAVGIILIVEGIDRM
Ga0208159_110181813300025101MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRM
Ga0208793_108481123300025108MarineMKEFLKEKSGAIMLGVGAILLISDLMGVEGIITFAVGIILIVEGVDRM
Ga0208433_111190723300025114MarineQNNMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIILIVEGVDRM
Ga0208299_103315173300025133MarineNNMKKFLKDKSGPIMMGIGAILLVSDLMGIEGIITFAVGIVLIVEGIDRM
Ga0208299_103542873300025133MarineMKKFLKDKSGPIMMGIGAMLLVSDLMGVEGIITFAVGIILIVEGVDRL
Ga0208299_120275113300025133MarineVGIGAILLTSSLMGIEGAITFAIGIILMVEGVDRM
Ga0209634_113281723300025138MarineMKKFLKDKSGPIMVGIGAILLVSDLMGIEGVITFAVGIILMVEGIDRM
Ga0209634_118852633300025138MarineMKKFLKDKSGPIMMGIGAVLLVSDLMGIEGIITFAVGIILIVEGVDRM
Ga0209337_125373223300025168MarineMKKFLKDKSGPIMMGIGAILLVSDLMGVEGAITFAVGIILIVEGVDRM
Ga0208029_106365323300025264Deep OceanMKKFLKEKSGPIMVGVGAILLVSDLMGVEGVITFAVGIILIVEGVDRI
Ga0208134_108092933300025652AqueousMKKFLKDKSGPIMMGIGAILLVSDLMGVEGVITFAVGIILIVEGVDRI
Ga0208678_107396123300027233EstuarineMKKFLKDKSGPIMVGIGAILLTSGLMGVEGAITFAIG
Ga0208809_103583323300027251EstuarineMKKFLKDKSGPIMVGIGAILLTSGLMGVEGAITFAIGIILMVEGVDRM
Ga0208305_1018702313300027753EstuarineMKRFLKDKSGPIMVGMGAILLTSGLMGVEGAITFAIGIILMVEGVDRM
Ga0209404_1127144913300027906MarineMKKFFKEKSGAIMMVLGAVLLAADLAGVEGAITFAVAIVLIVEGTSRM
Ga0257120_106620713300028284MarineMKKFLKDKSGPIMVGIGAILLTSGLMGIEGAIPFAIGIILIVEGVDRM
Ga0183757_101551333300029787MarineMKKFLKEKSGPIMVGIGAILLVSDLIGIEGVITFAVGIILIVEGVDRI
Ga0183757_103083713300029787MarineMKKFLKDKSGPIMVGIGAILLVSDLMGVEGAITFAVGIILI
Ga0308025_100932733300031143MarineMKKFLKKRSGAIMLGLGAGILTLDLMGISGVVTFAIGVILIVEGIDKV
Ga0307488_1029361223300031519Sackhole BrineMKKFLKDKSGPIMMGIGAILLVGDLMGIEGIITFAVGIILIVEGVDRM
Ga0307987_103644353300031631MarineMKKFLKKRSGAIMLGLGAGILTLDLMGVSGVITFAIGVILMV


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