NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087946

Metagenome Family F087946

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087946
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 67 residues
Representative Sequence MLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHMD
Number of Associated Samples 71
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.64 %
% of genes near scaffold ends (potentially truncated) 17.27 %
% of genes from short scaffolds (< 2000 bps) 64.55 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.636 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.091 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(27.273 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 59.09%    β-sheet: 0.00%    Coil/Unstructured: 40.91%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00871Acetate_kinase 22.73
PF00278Orn_DAP_Arg_deC 9.09
PF02321OEP 5.45
PF02784Orn_Arg_deC_N 3.64
PF08281Sigma70_r4_2 2.73
PF08002DUF1697 1.82
PF12698ABC2_membrane_3 1.82
PF00579tRNA-synt_1b 0.91
PF17132Glyco_hydro_106 0.91
PF16757Fucosidase_C 0.91
PF13376OmdA 0.91
PF04480DUF559 0.91
PF00005ABC_tran 0.91
PF09413DUF2007 0.91
PF01061ABC2_membrane 0.91
PF02659Mntp 0.91
PF02786CPSase_L_D2 0.91
PF02074Peptidase_M32 0.91
PF04565RNA_pol_Rpb2_3 0.91
PF13231PMT_2 0.91
PF02894GFO_IDH_MocA_C 0.91
PF04397LytTR 0.91
PF12412DUF3667 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0282Acetate kinaseEnergy production and conversion [C] 22.73
COG3426Butyrate kinaseEnergy production and conversion [C] 22.73
COG0019Diaminopimelate decarboxylaseAmino acid transport and metabolism [E] 12.73
COG1166Arginine decarboxylase (spermidine biosynthesis)Amino acid transport and metabolism [E] 12.73
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 10.91
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 1.82
COG0085DNA-directed RNA polymerase, beta subunit/140 kD subunitTranscription [K] 0.91
COG0162Tyrosyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.91
COG0180Tryptophanyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.91
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.91
COG1971Putative Mn2+ efflux pump MntPInorganic ion transport and metabolism [P] 0.91
COG2317Zn-dependent carboxypeptidase, M32 familyPosttranslational modification, protein turnover, chaperones [O] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.64 %
UnclassifiedrootN/A36.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000228|TB_PC08_66DRAFT_10004355All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7173Open in IMG/M
3300000228|TB_PC08_66DRAFT_10069441All Organisms → cellular organisms → Bacteria1191Open in IMG/M
3300000228|TB_PC08_66DRAFT_10077833Not Available1082Open in IMG/M
3300001213|JGIcombinedJ13530_104088774All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes853Open in IMG/M
3300001373|YBMDRAFT_10004282All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300001373|YBMDRAFT_10131078All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300002026|MIS_10005856All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes19535Open in IMG/M
3300002026|MIS_10016620All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7706Open in IMG/M
3300003541|JGI20214J51650_10322004All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300004151|Ga0066602_10371270Not Available640Open in IMG/M
3300004154|Ga0066603_10036720All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium2085Open in IMG/M
3300004242|Ga0066601_10269841All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes661Open in IMG/M
3300004282|Ga0066599_100039586Not Available1826Open in IMG/M
3300004282|Ga0066599_100195170All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides → unclassified Parabacteroides → Parabacteroides sp. FAFU0271096Open in IMG/M
3300004282|Ga0066599_101193985Not Available567Open in IMG/M
3300004782|Ga0062382_10377418All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes663Open in IMG/M
3300004808|Ga0062381_10027986All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1487Open in IMG/M
3300004808|Ga0062381_10279582Not Available607Open in IMG/M
3300005827|Ga0074478_1369817All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium3249Open in IMG/M
3300005827|Ga0074478_1739125Not Available1546Open in IMG/M
3300005831|Ga0074471_10015183All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia5223Open in IMG/M
3300005831|Ga0074471_10029105Not Available1350Open in IMG/M
3300005831|Ga0074471_10271909All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides → unclassified Parabacteroides → Parabacteroides sp. FAFU0272363Open in IMG/M
3300005831|Ga0074471_10310891Not Available801Open in IMG/M
3300005831|Ga0074471_10603878All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005831|Ga0074471_10702445Not Available647Open in IMG/M
3300005831|Ga0074471_10745859All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300005831|Ga0074471_10787788All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300005831|Ga0074471_11140392All Organisms → cellular organisms → Bacteria2887Open in IMG/M
3300006033|Ga0075012_10125745All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales1914Open in IMG/M
3300007959|Ga0079306_1000363All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes44335Open in IMG/M
3300007959|Ga0079306_1131849Not Available652Open in IMG/M
3300009032|Ga0105048_10220626All Organisms → cellular organisms → Bacteria2235Open in IMG/M
3300009083|Ga0105047_10011027All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Lentimicrobiaceae → Lentimicrobium → Lentimicrobium saccharophilum14709Open in IMG/M
3300009083|Ga0105047_10068553All Organisms → cellular organisms → Bacteria4718Open in IMG/M
3300009131|Ga0115027_10139739Not Available1465Open in IMG/M
3300009131|Ga0115027_10246698All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300009131|Ga0115027_11301541All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300009158|Ga0114977_10005044All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes8394Open in IMG/M
3300009158|Ga0114977_10536298All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300009175|Ga0073936_10081849All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2743Open in IMG/M
3300009179|Ga0115028_11066717All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300009657|Ga0116179_1252940Not Available581Open in IMG/M
3300009692|Ga0116171_10180878All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1204Open in IMG/M
3300009720|Ga0116159_1164329All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium936Open in IMG/M
3300009767|Ga0116161_1184625Not Available906Open in IMG/M
3300010206|Ga0136454_100090All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes666882Open in IMG/M
3300010212|Ga0136452_100557All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes57801Open in IMG/M
3300010344|Ga0116243_10804009Not Available548Open in IMG/M
3300010965|Ga0138308_100116All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes88190Open in IMG/M
3300010965|Ga0138308_101652All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales21761Open in IMG/M
3300010965|Ga0138308_129240Not Available2545Open in IMG/M
3300012044|Ga0136636_10037378Not Available2500Open in IMG/M
3300013232|Ga0170573_11134109Not Available890Open in IMG/M
3300013315|Ga0173609_10620124Not Available727Open in IMG/M
3300013315|Ga0173609_10855007All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Lentimicrobiaceae → Lentimicrobium3014Open in IMG/M
3300014502|Ga0182021_11108570Not Available953Open in IMG/M
3300020048|Ga0207193_1004850All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales21690Open in IMG/M
3300020048|Ga0207193_1008316All Organisms → cellular organisms → Bacteria15202Open in IMG/M
3300022555|Ga0212088_10134572All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Nomurabacteria → Candidatus Nomurabacteria bacterium2139Open in IMG/M
3300025718|Ga0209123_1014397All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Lentimicrobiaceae → Lentimicrobium → Lentimicrobium saccharophilum3988Open in IMG/M
3300025718|Ga0209123_1204708Not Available646Open in IMG/M
3300025858|Ga0209099_1195057All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium786Open in IMG/M
3300027265|Ga0208789_1000338All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes50149Open in IMG/M
3300027265|Ga0208789_1004217All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales4994Open in IMG/M
3300027265|Ga0208789_1007737All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales3189Open in IMG/M
3300027719|Ga0209467_1030840All Organisms → cellular organisms → Bacteria2313Open in IMG/M
(restricted) 3300027728|Ga0247836_1277150All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinilabiliaceae → Breznakibacter → Breznakibacter xylanolyticus612Open in IMG/M
3300027735|Ga0209261_10030721All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1330Open in IMG/M
3300027778|Ga0209464_10151609All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300027800|Ga0209800_10232271Not Available793Open in IMG/M
3300027851|Ga0209066_10072102All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales2400Open in IMG/M
3300027871|Ga0209397_10316585All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes749Open in IMG/M
3300027885|Ga0209450_11167568Not Available536Open in IMG/M
3300027887|Ga0208980_10246740Not Available1038Open in IMG/M
3300027887|Ga0208980_10529257Not Available675Open in IMG/M
3300028178|Ga0265593_1004854All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia5279Open in IMG/M
3300028864|Ga0302215_10118094Not Available1102Open in IMG/M
(restricted) 3300029268|Ga0247842_10034411All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3775Open in IMG/M
3300029989|Ga0311365_11719669All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium537Open in IMG/M
3300030002|Ga0311350_11231088Not Available667Open in IMG/M
3300030339|Ga0311360_10363791Not Available1166Open in IMG/M
3300030339|Ga0311360_10460410Not Available1021Open in IMG/M
3300030339|Ga0311360_10609259All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium872Open in IMG/M
3300030339|Ga0311360_11195981Not Available598Open in IMG/M
3300030943|Ga0311366_10693176Not Available885Open in IMG/M
3300031918|Ga0311367_11336761All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium707Open in IMG/M
3300032173|Ga0315268_10446980Not Available1270Open in IMG/M
3300032173|Ga0315268_10518903All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia1176Open in IMG/M
3300032173|Ga0315268_11279078All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium744Open in IMG/M
3300032173|Ga0315268_12581372Not Available522Open in IMG/M
3300032256|Ga0315271_11301949Not Available628Open in IMG/M
3300032275|Ga0315270_10048896Not Available2372Open in IMG/M
3300032275|Ga0315270_10065797All Organisms → cellular organisms → Bacteria2062Open in IMG/M
3300032275|Ga0315270_10487211All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium794Open in IMG/M
3300032420|Ga0335397_10008153All Organisms → cellular organisms → Bacteria13217Open in IMG/M
3300032420|Ga0335397_10152004Not Available2281Open in IMG/M
3300032420|Ga0335397_10651153All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes791Open in IMG/M
3300033418|Ga0316625_100257360All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300033482|Ga0316627_101963804Not Available606Open in IMG/M
3300033483|Ga0316629_11681646Not Available522Open in IMG/M
3300033488|Ga0316621_10562399All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300033494|Ga0316612_1001345All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia6642Open in IMG/M
3300033557|Ga0316617_102092245Not Available583Open in IMG/M
3300034118|Ga0335053_0073339All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia2405Open in IMG/M
3300034129|Ga0370493_0338433Not Available521Open in IMG/M
3300034156|Ga0370502_0031950All Organisms → cellular organisms → Bacteria1650Open in IMG/M
3300034158|Ga0370507_0126649Not Available806Open in IMG/M
3300034349|Ga0370504_0030452All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia1355Open in IMG/M
3300034691|Ga0370488_005856All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides → unclassified Parabacteroides → Parabacteroides sp. FAFU0273611Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)10.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment7.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater7.27%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater5.45%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge5.45%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland4.55%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment4.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.55%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil4.55%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface4.55%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen4.55%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland3.64%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.64%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.73%
Lake ChemoclineEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline2.73%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater2.73%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.82%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion1.82%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment1.82%
LittoralEnvironmental → Aquatic → Freshwater → Lake → Sediment → Littoral1.82%
Sinkhole FreshwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater1.82%
WatershedsEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds1.82%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine1.82%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.82%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment1.82%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.91%
Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Sediment → Microbial Mat0.91%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.91%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.91%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.91%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.91%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000228Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- PC08_66EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001373YB-Mouth-sedEnvironmentalOpen in IMG/M
3300002026Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 5k+EnvironmentalOpen in IMG/M
3300003541Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004151Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5EnvironmentalOpen in IMG/M
3300004154Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8EnvironmentalOpen in IMG/M
3300004242Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11EnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005827Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBAEnvironmentalOpen in IMG/M
3300005831Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBMEnvironmentalOpen in IMG/M
3300006033Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15EnvironmentalOpen in IMG/M
3300007959Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5EnvironmentalOpen in IMG/M
3300009032Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05EnvironmentalOpen in IMG/M
3300009083Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009657Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaGEngineeredOpen in IMG/M
3300009692Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaGEngineeredOpen in IMG/M
3300009720Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaGEngineeredOpen in IMG/M
3300009767Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaGEngineeredOpen in IMG/M
3300010206Littoral zone phototrophic microbial communities from Lake Waban, Wellesley, MA - FCP16cEnvironmentalOpen in IMG/M
3300010212Littoral zone phototrophic microbial communities from Lake Waban, Wellesley, MA - FCS17aEnvironmentalOpen in IMG/M
3300010344AD_JPAScaEngineeredOpen in IMG/M
3300010965Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621EnvironmentalOpen in IMG/M
3300012044Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ852 (21.06)EnvironmentalOpen in IMG/M
3300013232Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1EngineeredOpen in IMG/M
3300013315Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1BEngineeredOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300025718Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)EnvironmentalOpen in IMG/M
3300025858Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)EngineeredOpen in IMG/M
3300027265Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 (SPAdes)EnvironmentalOpen in IMG/M
3300027719Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027800Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)EnvironmentalOpen in IMG/M
3300027851Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300028178Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2011_5_24_36mEnvironmentalOpen in IMG/M
3300028864Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_1EnvironmentalOpen in IMG/M
3300029268 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_19mEnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033494Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2016.226EnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034129Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16EnvironmentalOpen in IMG/M
3300034156Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18EnvironmentalOpen in IMG/M
3300034158Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18EnvironmentalOpen in IMG/M
3300034349Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_18EnvironmentalOpen in IMG/M
3300034691Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
TB_PC08_66DRAFT_1000435593300000228GroundwaterMLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYIINQHLDDGEGE*
TB_PC08_66DRAFT_1006944133300000228GroundwaterMLSKQRIPDLVVIVVLGLLLILLNYTGNIGIMSDYPFVFLLIMYFVGRAVTWYIINQHLDDGEGE*
TB_PC08_66DRAFT_1007783323300000228GroundwaterMLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTGVNNE*
JGIcombinedJ13530_10408877423300001213WetlandMLSKDRIPDLIVIALLGLLLVLLNYTGNAGIIANYPFVFLLAMYFIGRAVTWYVINNHMRNGDDTD*
YBMDRAFT_1000428223300001373Marine EstuarineMLSKQRIPDLIVIAVLGLILVLLNYTGTIGIIADYPFVFLLAMYFLGRAMTWYIINNFMDHDDDGS*
YBMDRAFT_1013107813300001373Marine EstuarineMLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHMDDGESGD*
MIS_10005856213300002026Sinkhole FreshwaterMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFLGRAVTWYIINQHMDEGDGGKEQE*
MIS_1001662023300002026Sinkhole FreshwaterMLSKQRIPDLIVILVLGLFLTLLNYTGTIGVVSDYPFIFMLIMYFVGRAVTWYVINKHFEEDEGE*
JGI20214J51650_1032200423300003541WetlandMLSKQRIPDLIVIAVLGLTLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINNYGSDGNDEN*
Ga0066602_1037127013300004151FreshwaterKKDTMLSKQRVPDLIVIATLGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYVINKHFDNNEDMENNE*
Ga0066603_1003672033300004154FreshwaterMLSKQRVPDLIVIATLGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYVINKHFDNNEDMENNE*
Ga0066601_1026984113300004242FreshwaterMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLAMYFVGRAVTWYIINNYGNDGGEHE*
Ga0066599_10003958633300004282FreshwaterMLSKQRIPDLIVIASLGLLWALLSFTGTLSIVSDYIFFFLLTMYFLGRAVTWYIIQKHTEDQDHHEDS*
Ga0066599_10019517023300004282FreshwaterMLTKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINNFGNDGGGQE*
Ga0066599_10119398513300004282FreshwaterMLSKQRVPDLIVIATLGLFLILLNYTGNIGILSDYPFIFLLIMYFVGRAVTWYVINKHFDNNEDNGN
Ga0062382_1037741823300004782Wetland SedimentMFFVCLPKIKFMLSKDRIPDLVVIAVLGLLLVLLNYTGNIAIVTNYPFVFLLAMYFVGRAVTWYVINKHMENEDDNN*
Ga0062381_1002798613300004808Wetland SedimentMTATKCNLHTLNLSLNIMLSKQRIPDLIVIATLGLLLVLLNYTGQIGVIANYPFIFLLAMYFIGRAVTWYIINKHMEE*
Ga0062381_1027958213300004808Wetland SedimentMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHMD
Ga0074478_136981723300005827Sediment (Intertidal)MLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISDYPFIFLLAMYFIGRAVTWYIINKHMEE*
Ga0074478_173912523300005827Sediment (Intertidal)MTATKCNLHTLNLSLNIMLSKQRIPDLIVIATLGLLLVLLNYTGQIGVIANYPFLFLLAMYFIGRAVTWYIINKHMEE*
Ga0074471_1001518363300005831Sediment (Intertidal)MLSKQRIPDLIVIAVLGLILVLLNYTGTIGIIADYPFVFLLAMYFLGRAMTWYIINNFMDHGDDGS*
Ga0074471_1002910533300005831Sediment (Intertidal)MLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLAMYFIGRAVTWYVINNFGNDEGEQE*
Ga0074471_1027190913300005831Sediment (Intertidal)MLTKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYI
Ga0074471_1031089133300005831Sediment (Intertidal)MLSKQRVPDLIVIATLGLFLILLNYTGNIGILSDYPFIFLLIMYFVGRAVTWYVINKHFDNNEDNGNNE*
Ga0074471_1060387823300005831Sediment (Intertidal)MLSKQRIPDLIVIAVLGLFLILLNYTGHIGIMSDYPFIFLLAMYFVGRAVTWYIINQHMDDDGRE*
Ga0074471_1070244523300005831Sediment (Intertidal)MLSKQRIPDLIVIAVLGLSLVLLNYTGNIGIMSDYPFIFLLAMYFVGRAVTWYIINNYGNDGGEQE*
Ga0074471_1074585913300005831Sediment (Intertidal)MLSKQRIPDLIVIAVLGLVLVLLNYTGTIGIIADYPFVFLLAMYFIGRAITWYVINNYMD
Ga0074471_1078778813300005831Sediment (Intertidal)MLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWHIINQHMDDGESGD*
Ga0074471_1114039213300005831Sediment (Intertidal)MLSKQRIPDLIVIAVLGLSLVLLNYTGQIGIISDYPFIFLLVMYFVGRAVTWYIINTHMEDEGNSNDGI*
Ga0075012_1012574523300006033WatershedsMLSKQRVPDLIVIATLGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYVINKHFDNNENEDIGNNE*
Ga0079306_1000363123300007959Deep SubsurfaceMLSKQRIPDLIVIAVLGLLLILLNYIGKIGIISDYPFIFLLAMYFIGRAMTWYIINKHMDNESEEE*
Ga0079306_113184923300007959Deep SubsurfaceMLSKQRIPDLIVIVVLGLFLILLNYTGNIGVISNYPFIFLLVMYFVGRGVTWYIINKNAGDIDDGDGSQ*
Ga0105048_1022062623300009032FreshwaterMLSKQRIPDLIVIAVLGLFLILLNYTGNIGVISNYPFVFLMIMYFVGRGVTWYIINKHMDNSDDEGDT*
Ga0105047_10011027113300009083FreshwaterMLSKQRVPDLIVIVVIGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRGVTWYVINKHMDDNENEDGRNIE*
Ga0105047_1006855333300009083FreshwaterMLSKQRIPDLIVIAVLGLSLVLLNYTGHIGIVSDYPFIFLLVMYFVGRAVTWYVINNHMEDGSE*
Ga0115027_1013973913300009131WetlandINFMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHLDEGDNGEDL*
Ga0115027_1024669823300009131WetlandMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVPWYIINQ
Ga0115027_1130154113300009131WetlandMLSKQRIPDLIVIAVLGLLWALLSYTGNLGIISDYLFFFLFFMYLVGRAVTWYVINKHMEDQENDDNP*
Ga0114977_1000504433300009158Freshwater LakeMLSKQRIPDLIVIAVLGLFLVLLNYTHTIGIISDFPFIFMLAMYFIGRAVTWYIINKHMEDGQDEDS*
Ga0114977_1053629823300009158Freshwater LakeMLSKQRIPDLIVIAVLGLFLVLLNYTHTIGIISDFPFIFMLAMYFIGRAVTWYIINRHMEDGQDEDS*
Ga0073936_1008184923300009175Freshwater Lake HypolimnionMLSRDRLPDLIVIVVLALLLTLLNYSGHIRVISDYPLVFLLTTYFLGRAVTWYVINNHKQDKDEEG*
Ga0115028_1106671723300009179WetlandMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLAMYFVGRAVT
Ga0116179_125294013300009657Anaerobic Digestor SludgeMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISDYPFLFLLAMYFIGRAVTWYIINKHMEE*
Ga0116171_1018087823300009692Anaerobic Digestor SludgeMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISNYPFLFLLAMYFIGRAVTWYIINKHMEE*
Ga0116159_116432923300009720Anaerobic Digestor SludgeMLSKQRIPDLIVIAVLGLLLVLLNYTGHIGLVSDYPFIFLLAMYFVGRAVTWYIINNSMEE*
Ga0116161_118462513300009767Anaerobic Digestor SludgeIILKPLNMLSKQRIPDLIVIAVLGLLLVLLNYTGHIGLVSDYPFIFLLAMYFVGRAVTWYIINNSMEE*
Ga0136454_1000903093300010206LittoralMLSKERLPDIIVIALLLLILLAMNYFKIIHVIGNYPFVFLLIMYFIGRAVTWYVISKHMDKDE*
Ga0136452_100557293300010212LittoralMFAQKTDMLSKQRIPDLIVIVVLGLFLLLLNYTGHIGVISNYPFIFLLIMYFVGRGVTWYIINKNMQE*
Ga0116243_1080400913300010344Anaerobic Digestor SludgeNNSLTFMLRKERIPDLIVIAVVGLILLFLNYIGQIHIVSDYPFIFLLAMYFTGRAVTWYVINMHAERDSDDDADNENVN*
Ga0138308_100116333300010965Lake ChemoclineMFVKKNNCMLSKQRIPDLIFIVVLGLILTLLNYTGQAGIISNFPFIFLLITYFVGRAVTWYVINKHMEDGENGDGGN*
Ga0138308_101652173300010965Lake ChemoclineMLSKQRIPDLIVIAVLGLLLVLLNYTGNTWIMSDYPFIFLLAMYFVGRAVTWYIINQHLDNGEGEG*
Ga0138308_12924023300010965Lake ChemoclineMLSKQRVPDLIVIVTLGLFLILLNYTGNIGIMSDYPFIFMLIMYFVGRGVTWHVINKHLDDNGNEDDGNNE*
Ga0136636_1003737843300012044Polar Desert SandMLSKQRIPDLIVIAVLGLSMVLLNYTGHAGIISDYPFIFLLIMYFVGRAVTWYIINNHMEE*
Ga0170573_1113410913300013232SedimentKIHFMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLAMYFIGRAVTWYVINNFGDDGREQE*
Ga0173609_1062012413300013315SedimentMLSKQRIPDLIVIVVLGLLLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYIINQHIDDGESDD*
Ga0173609_1085500733300013315SedimentMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYVINNFGDDGGEQE*
Ga0182021_1110857013300014502FenMLSKQRIPDLIVITVLGLFLILLNYTGNIGIISNYPFIFLLAMYFVGRAVTWYIINHHMEDGEGGGDA*
Ga0207193_100485023300020048Freshwater Lake SedimentMLSKQRIPDLIVIAVLGLFLVLLNYTHTIGIISDFPFIFMLAMYFIGRAVTWYIINKHMEDGQDEDS
Ga0207193_1008316133300020048Freshwater Lake SedimentMLSKQRIPDLIFIAVLGLFLTLLNYTGQIGIVSDFPFIFMLIAYFVGRAVTWYIINKHMDTGENSDESN
Ga0212088_1013457233300022555Freshwater Lake HypolimnionMLSRDRLPDLIVIVVLALLLTLLNYSGHIRVISDYPLVFLLTTYFLGRAVTWYVINNHKQDKDEEG
Ga0209123_101439713300025718Arctic Peat SoilMLSKQRIPDLIVIAVLGLLLIFLNYTGHIGLVSDYPFIFLLMMYFVGRAVTWYIINNQMEDRDGQE
Ga0209123_120470813300025718Arctic Peat SoilMVIAVLGLLLIFLNYTGNIGLVSNYPFIFLLVMYFVGRAVTWYIINNQMEDSDGQE
Ga0209099_119505723300025858Anaerobic Digestor SludgeMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISNYPFLFLLAMYFIGRAVTWYIINKHME
Ga0208789_1000338123300027265Deep SubsurfaceMLSKQRIPDLIVIAVLGLLLILLNYIGKIGIISDYPFIFLLAMYFIGRAMTWYIINKHMDNESEEE
Ga0208789_100421743300027265Deep SubsurfaceMLSKQRIPDLIVIVVLGLFLILLNYTGNIGVISNYPFIFLLVMYFVGRGVTWYIINKNAGDIDDGDGSQ
Ga0208789_100773723300027265Deep SubsurfaceMLSKQRIPDLIVIAVLGLLLILLNYTGSIGIISDYPFIFLLVMYFIGRAVTWYIINKKMEEDES
Ga0209467_103084023300027719FreshwaterMLSKQRVPDLIVIATLGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYVINKHFDNNEDMENNE
(restricted) Ga0247836_127715023300027728FreshwaterMLSKQRIPDLIVILVLGLFLTLLNYTGKIGVVSDYPFIFMLIMYFVGRAVTWYVINKHFEEDEGE
Ga0209261_1003072123300027735Wetland SedimentMLSKDRIPDLVVIAVLGLLLVLLNYTGNIAIVTNYPFVFLLAMYFVGRAVTWYVINKHMENEDDNN
Ga0209464_1015160913300027778Wetland SedimentATKCNLHTLNLSLNIMLSKQRIPDLIVIATLGLLLVLLNYTGQIGVIANYPFIFLLAMYFIGRAVTWYIINKHMEE
Ga0209800_1023227123300027800FreshwaterMLRKERIPDLIVIAVVGIILLFLNYIGQIHIVSDYPFIFLLAMYFTGRAVTWYVINMHAERDSDDDADNENVN
Ga0209066_1007210223300027851WatershedsMLSKQRVPDLIVIATLGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRAVTWYVINKHFDNNENEDIGNNE
Ga0209397_1031658513300027871WetlandINFMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHLDEGDNGEDL
Ga0209450_1116756813300027885Freshwater Lake SedimentMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSEYPFIFLLAMYFVGRAVTWYIINKHMDDEGGE
Ga0208980_1024674013300027887WetlandMLSKQRIPDLIVIAVLGLLLVLLNYTGHIGIISEYPFIFLLVMYFVGRAVTWYIINNHMPGGEDDE
Ga0208980_1052925713300027887WetlandMLSKQRIPDLIVIAVLGLLLVLLNYTGRIGIISEYPFIFLLVMYFVGRAVTWYIINNHMPGGEDDGQ
Ga0265593_100485443300028178Saline WaterMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHMDNEDGDAE
Ga0302215_1011809413300028864FenIDSGTINYIKTHIMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISDYPFIFLLVMYFVGRAVTWYIINKHREDNEE
(restricted) Ga0247842_1003441123300029268FreshwaterMLRKERLPDIIVFAVLGLFLIMLNYIGKIHIISDYPFIFLLIMYFCGRAVTWYVINKHME
Ga0311365_1171966923300029989FenMLSKQRIPDLIVIAVLGLLLIFLNYTGHIGLVSDYPFIFLLVMYFVGRAVTWYIINNQVEDNDGQE
Ga0311350_1123108823300030002FenMLSKQRIPDLIVLVVLGAFLILLNYTGNIGVISDYPYIFLLIMYFVGRAVTWYIIHKHVEDGENGDDSNLTP
Ga0311360_1036379123300030339BogMLSKQRIPDLIVIAVLGLLLVLLNYTGHIGIISDYPFIFLLVMYFVGRAVTWYIINNHMQGGEDEEQP
Ga0311360_1046041023300030339BogMLQAKQTRDFCTFAKNNIMLSKQRIPDLIVIAVLGLLLIMLNYMGQIRVISDYPFIFLLIMYFVGRAVTWYIINKHMGNDENGSGGN
Ga0311360_1060925923300030339BogMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISDYPFIFLLVMYFVGRAVTWYIINKH
Ga0311360_1119598113300030339BogMLSKDRIPDLIVIAVLGLLLVLLNYTGNIGIISNYPFVFLLAMYFIGRAVTWYVINNHIGNGDDAD
Ga0311366_1069317623300030943FenMLSKQRIPDLIVIAVLGLLLVLLNYTGQIGIISDYPFIFLLVMYFVGRAVTWYIINKHREDNEE
Ga0311367_1133676123300031918FenMLSKQRIPDLIVIAVLGLLLIFLNYTGHIGLVSDYPFIFLLVMYFVGRAITWYIINNQAEDSDGQE
Ga0315268_1044698023300032173SedimentMLSKQRIPDLVVIVVLGLLLILLNYTGNMGIMSDYPFVFLLVMYFVGRAITWYIINNYGNDGGEQE
Ga0315268_1051890323300032173SedimentMLSKQRIPDLIVIAVLGLVMVLLNYTGQIGIMSDYPFIFLLVMYFVGRAVTWYIINKHMEDNEE
Ga0315268_1127907823300032173SedimentMLSKQRIPDLIVIAVLGLFLLLLNYTGRIGVISDYPFIFLLVMYFVGRAVTWYVINKHMEDNEE
Ga0315268_1258137213300032173SedimentMLSKQRIPDLIVIAVLGLSLVLLNYTGQIGIISDYPFIFLLVVYFVGRAVTWYIINKHMEDNED
Ga0315271_1130194913300032256SedimentMLSKQRIPDLIVIVVLALFLLLLNYTGSIGVISNYPFIFLLIMYFIGRGVTWYV
Ga0315270_1004889623300032275SedimentMLSKQRIPDLIVIAVLGLSLVLLNYTGQIGIISDYPFIFLLVMYFVGRAVTWYIINKHMEDNED
Ga0315270_1006579723300032275SedimentMLSKQRIPDLIVIAVLGLILVLLNYTGTIGIIADYPFVFLLAMYFIGRAITWYVINNYMDNEDDGR
Ga0315270_1048721113300032275SedimentMLSKQRIPDLIVIAVLGLFLVLLNYTGRIGIISDYPFIFLLVMYFVGRAVTWYVINKHMEDNEE
Ga0335397_1000815343300032420FreshwaterMLSKQRIPDLIVIAVLGLSLVLLNYTGHIGIVSDYPFIFLLVMYFVGRAVTWYVINNHMEDGSE
Ga0335397_1015200433300032420FreshwaterMLSKQRIPDLIVIAVLGLFLILLNYTGNIGVISNYPFVFLMIMYFVGRGVTWYIINKHMDNSDDEGDT
Ga0335397_1065115323300032420FreshwaterMLSKQRVPDLIVIVVIGLFLILLNYTGNIGIMSDYPFIFLLIMYFVGRGVTWYVINKHMDDNENEDGRNIE
Ga0316625_10025736023300033418SoilMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAVTWYIINQHLDEGDNGEDL
Ga0316627_10196380423300033482SoilMLSKQRIPDLIVIAVLGLLWALLSYTGNLGIISDYLFFFLFFMYLVGRAVTWYVINKHMEDQENDDNP
Ga0316629_1168164613300033483SoilMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLAMYFVGRAVTWYVINNYGDDGGEQE
Ga0316621_1056239913300033488SoilMLKKQRIPDLIVIAVLGLLLVLLNYTGNIGIMSDYPFIFLLAMYFVGRAVTWYIINQHLDEGDNGEDL
Ga0316612_100134553300033494Microbial MatMLSKQRIPDLIVILVLGLFLTLLNYTGTIGVVSDYPFIFMLIMYFVGRAVTWYVINKHFEEDEGE
Ga0316617_10209224523300033557SoilMLSKQRIPDLIVIAVLGLLLVLLNYTGNIGIMADYPFIFLLVMYFVGRAVTWYVINNYGDNGGEQE
Ga0335053_0073339_2164_23793300034118FreshwaterMLSKQRVPDLIVIVAIGLFLILLNYTGNIGIMSDYPFIFMLIMYFVGRGVTWYVINKHMDDNESEDPGNNE
Ga0370493_0338433_185_3853300034129Untreated Peat SoilMLSKQRIPDLMVIAVLGLLLVFLNYTGHIGLVSDYPFIFLLVMYFVGRAVTWYIINKQMEDSDGQE
Ga0370502_0031950_337_5373300034156Untreated Peat SoilMLSKQRIPDLIVIAVLGLTLVLLNYTGNIGIMSDYPFIFLLVMYFVGRAITWYIINNYGSDGNDEN
Ga0370507_0126649_7_2133300034158Untreated Peat SoilMLSKQRIPDLIVIAILGLLLILLNYTGNIGIISDYPFIFLLIMYFVGRGVTWYIINKHMENGDGDGEL
Ga0370504_0030452_527_7333300034349Untreated Peat SoilMLSKQRIPDLIVIVVLGLLLVLLNYTGHIGIMSDYPFIFLLVMYFVGRSVTWYIINQHMDDEDGGGDS
Ga0370488_005856_2556_27623300034691Untreated Peat SoilMLSKQRIPDLIVIVVLGLLLVLLNYTGHIGIMSDYPFIFLLVMYFVGRSVTWYIINQHMDEEDGEGDS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.