Metagenome / Metatranscriptome Family F088040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	80 residues
Representative Sequence	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Number of Associated Samples	61
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.72 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (81.651 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (59.633 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04226	Transgly_assoc	1.83
PF00975	Thioesterase	1.83
PF02371	Transposase_20	1.83
PF13417	GST_N_3	0.92
PF08241	Methyltransf_11	0.92
PF00027	cNMP_binding	0.92
PF00313	CSD	0.92
PF13460	NAD_binding_10	0.92
PF13436	Gly-zipper_OmpA	0.92
PF13410	GST_C_2	0.92
PF12158	DUF3592	0.92
PF00691	OmpA	0.92
PF02272	DHHA1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
All Organisms	root	All Organisms	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
cellular organisms	root	All Organisms → cellular organisms	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.92 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1008710	Not Available	1646	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10009144	Not Available	2727	Open in IMG/M
3300004633\|Ga0066395_10215086	Not Available	1013	Open in IMG/M
3300004633\|Ga0066395_10420538	Not Available	757	Open in IMG/M
3300004633\|Ga0066395_10976219	Not Available	516	Open in IMG/M
3300005332\|Ga0066388_100313096	All Organisms → cellular organisms → Bacteria → Proteobacteria	2215	Open in IMG/M
3300005332\|Ga0066388_100914912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1453	Open in IMG/M
3300005332\|Ga0066388_101395592	Not Available	1216	Open in IMG/M
3300005332\|Ga0066388_102036303	Not Available	1030	Open in IMG/M
3300005332\|Ga0066388_102994121	Not Available	863	Open in IMG/M
3300005332\|Ga0066388_106179546	Not Available	605	Open in IMG/M
3300005363\|Ga0008090_10083141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1308	Open in IMG/M
3300005363\|Ga0008090_15813542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1010	Open in IMG/M
3300005764\|Ga0066903_100532104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2006	Open in IMG/M
3300005764\|Ga0066903_101519491	Not Available	1265	Open in IMG/M
3300005764\|Ga0066903_106634186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300010048\|Ga0126373_11371912	Not Available	772	Open in IMG/M
3300010358\|Ga0126370_10821400	Not Available	831	Open in IMG/M
3300010360\|Ga0126372_10863358	Not Available	903	Open in IMG/M
3300010360\|Ga0126372_11993106	Not Available	627	Open in IMG/M
3300010361\|Ga0126378_10363654	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300010361\|Ga0126378_11867331	Not Available	684	Open in IMG/M
3300010366\|Ga0126379_10051435	All Organisms → cellular organisms → Bacteria	3394	Open in IMG/M
3300010366\|Ga0126379_13745064	Not Available	509	Open in IMG/M
3300010376\|Ga0126381_100555142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1628	Open in IMG/M
3300010376\|Ga0126381_102299074	Not Available	774	Open in IMG/M
3300010398\|Ga0126383_10631318	Not Available	1145	Open in IMG/M
3300010868\|Ga0124844_1001254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3218	Open in IMG/M
3300012971\|Ga0126369_10253787	Not Available	1732	Open in IMG/M
3300012971\|Ga0126369_13133958	Not Available	541	Open in IMG/M
3300012971\|Ga0126369_13378374	Not Available	523	Open in IMG/M
3300016270\|Ga0182036_10119947	Not Available	1823	Open in IMG/M
3300016270\|Ga0182036_10693156	Not Available	823	Open in IMG/M
3300016341\|Ga0182035_10082096	All Organisms → cellular organisms → Bacteria → Proteobacteria	2304	Open in IMG/M
3300016341\|Ga0182035_11952097	Not Available	533	Open in IMG/M
3300016357\|Ga0182032_10466771	Not Available	1032	Open in IMG/M
3300016371\|Ga0182034_10480187	Not Available	1033	Open in IMG/M
3300016371\|Ga0182034_11063907	Not Available	700	Open in IMG/M
3300016371\|Ga0182034_11594554	Not Available	573	Open in IMG/M
3300016404\|Ga0182037_10488457	Not Available	1030	Open in IMG/M
3300016404\|Ga0182037_10952137	Not Available	746	Open in IMG/M
3300016422\|Ga0182039_10097914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2157	Open in IMG/M
3300016422\|Ga0182039_10550123	Not Available	1003	Open in IMG/M
3300016445\|Ga0182038_11069827	Not Available	716	Open in IMG/M
3300016445\|Ga0182038_11186476	Not Available	680	Open in IMG/M
3300017959\|Ga0187779_10217391	Not Available	1200	Open in IMG/M
3300017973\|Ga0187780_10388019	Not Available	990	Open in IMG/M
3300017999\|Ga0187767_10217192	Not Available	613	Open in IMG/M
3300018058\|Ga0187766_10046831	Not Available	2534	Open in IMG/M
3300021560\|Ga0126371_10151304	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300021560\|Ga0126371_10199864	Not Available	2093	Open in IMG/M
3300021560\|Ga0126371_10389002	Not Available	1535	Open in IMG/M
3300021560\|Ga0126371_12451755	Not Available	631	Open in IMG/M
3300027003\|Ga0207722_1004959	Not Available	1645	Open in IMG/M
3300027049\|Ga0207806_1010861	Not Available	1115	Open in IMG/M
3300027680\|Ga0207826_1083693	Not Available	879	Open in IMG/M
3300027703\|Ga0207862_1007836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3116	Open in IMG/M
3300031057\|Ga0170834_110146362	Not Available	547	Open in IMG/M
3300031543\|Ga0318516_10181974	Not Available	1211	Open in IMG/M
3300031543\|Ga0318516_10322523	Not Available	892	Open in IMG/M
3300031543\|Ga0318516_10355542	Not Available	845	Open in IMG/M
3300031545\|Ga0318541_10141688	Not Available	1315	Open in IMG/M
3300031545\|Ga0318541_10419672	Not Available	748	Open in IMG/M
3300031545\|Ga0318541_10728759	Not Available	553	Open in IMG/M
3300031546\|Ga0318538_10564605	Not Available	617	Open in IMG/M
3300031564\|Ga0318573_10554345	Not Available	619	Open in IMG/M
3300031573\|Ga0310915_10083352	Not Available	2131	Open in IMG/M
3300031573\|Ga0310915_10372921	Not Available	1013	Open in IMG/M
3300031573\|Ga0310915_11280934	Not Available	505	Open in IMG/M
3300031680\|Ga0318574_10157076	Not Available	1294	Open in IMG/M
3300031681\|Ga0318572_10347937	Not Available	879	Open in IMG/M
3300031736\|Ga0318501_10320601	Not Available	829	Open in IMG/M
3300031736\|Ga0318501_10524181	Not Available	647	Open in IMG/M
3300031768\|Ga0318509_10085857	Not Available	1676	Open in IMG/M
3300031781\|Ga0318547_10263824	Not Available	1041	Open in IMG/M
3300031792\|Ga0318529_10227865	Not Available	866	Open in IMG/M
3300031792\|Ga0318529_10229669	Not Available	862	Open in IMG/M
3300031796\|Ga0318576_10628446	Not Available	506	Open in IMG/M
3300031879\|Ga0306919_10005184	All Organisms → cellular organisms → Bacteria	6887	Open in IMG/M
3300031879\|Ga0306919_10450839	Not Available	990	Open in IMG/M
3300031879\|Ga0306919_10666615	Not Available	802	Open in IMG/M
3300031880\|Ga0318544_10398963	Not Available	535	Open in IMG/M
3300031890\|Ga0306925_10097027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3134	Open in IMG/M
3300031890\|Ga0306925_10538892	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300031912\|Ga0306921_10248549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2084	Open in IMG/M
3300031912\|Ga0306921_10333026	Not Available	1776	Open in IMG/M
3300031912\|Ga0306921_12353089	Not Available	557	Open in IMG/M
3300031941\|Ga0310912_10705631	Not Available	782	Open in IMG/M
3300031942\|Ga0310916_10048220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	3241	Open in IMG/M
3300031945\|Ga0310913_10382123	Not Available	998	Open in IMG/M
3300031945\|Ga0310913_10735023	Not Available	697	Open in IMG/M
3300031946\|Ga0310910_10303580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300031946\|Ga0310910_10551871	Not Available	914	Open in IMG/M
3300031946\|Ga0310910_10857850	Not Available	713	Open in IMG/M
3300031954\|Ga0306926_10612141	Not Available	1329	Open in IMG/M
3300031954\|Ga0306926_12577818	Not Available	555	Open in IMG/M
3300032001\|Ga0306922_11192348	Not Available	775	Open in IMG/M
3300032044\|Ga0318558_10579407	Not Available	561	Open in IMG/M
3300032060\|Ga0318505_10406858	Not Available	643	Open in IMG/M
3300032064\|Ga0318510_10271810	Not Available	701	Open in IMG/M
3300032091\|Ga0318577_10052531	Not Available	1833	Open in IMG/M
3300032094\|Ga0318540_10065726	Not Available	1657	Open in IMG/M
3300032094\|Ga0318540_10176369	Not Available	1028	Open in IMG/M
3300032261\|Ga0306920_100593965	Not Available	1638	Open in IMG/M
3300032261\|Ga0306920_101503725	Not Available	961	Open in IMG/M
3300032261\|Ga0306920_102454260	Not Available	718	Open in IMG/M
3300033289\|Ga0310914_10464104	Not Available	1146	Open in IMG/M
3300033289\|Ga0310914_11249078	Not Available	645	Open in IMG/M
3300033289\|Ga0310914_11528300	Not Available	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.73%
Loam	Environmental → Terrestrial → Soil → Loam	15.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10087102	3300000580	Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKALAPTKPIPRTTQQVSTFGGSAEPRPA*
AF_2010_repII_A1DRAFT_100091442	3300000597	Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA*
Ga0066395_102150863	3300004633	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQVSALSGSWAGPRPA*
Ga0066395_104205382	3300004633	Tropical Forest Soil	LPVRLRKWLVGTTMVLNRADECRQRADECRRSAAQVADNVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTRAT*
Ga0066395_109762191	3300004633	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0066388_1003130964	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADEVLRVTYLDLARRWRKMAHEAELLERKAVGPTKSTPGTAEQVSAFSGLRARTRAT*
Ga0066388_1009149122	3300005332	Tropical Forest Soil	RQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSGSWAGPRPA*
Ga0066388_1013955924	3300005332	Tropical Forest Soil	RADECRRGAAQAADDVLRVTYLDLARRWRKMAHDAESLERKAMAPTKPIPRTAQEVSGLSGSWAGPRPA*
Ga0066388_1020363031	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRTPRRAQQVSALSGLQGGPRPA*
Ga0066388_1029941212	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT*
Ga0066388_1061795462	3300005332	Tropical Forest Soil	RRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGLPKSTPGTAEQVSALSAFGRDLGRRSLTA*
Ga0008090_100831412	3300005363	Tropical Rainforest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAQEAESLERKALAPTKPIPRTAQQASALSGSWAGPRPA*
Ga0008090_158135421	3300005363	Tropical Rainforest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA*
Ga0066903_1005321043	3300005764	Tropical Forest Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHDAESLERKAMAPTKPIPRTAQEVSGLSGSWAGPRPA*
Ga0066903_1015194913	3300005764	Tropical Forest Soil	MVLNRSDECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGLPKSTPGTAEQVSALSAFGRDLGRRSLTA*
Ga0066903_1066341861	3300005764	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAPDDVLRETYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQV
Ga0126373_113719121	3300010048	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA*
Ga0126370_108214003	3300010358	Tropical Forest Soil	MALNRADECRQRADECRRCAAETADDVLRVTYLDLARRWRKMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126372_108633581	3300010360	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTNPIPRTAERVSAISGLW
Ga0126372_119931061	3300010360	Tropical Forest Soil	MVLNRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0126378_103636543	3300010361	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126378_118673311	3300010361	Tropical Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTSQQVSTLSGSAEPRPA*
Ga0126379_100514358	3300010366	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMDPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126379_137450642	3300010366	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDVLRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0126381_1005551422	3300010376	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSESWAGPRPA*
Ga0126381_1022990742	3300010376	Tropical Forest Soil	ALAQAECLPVRLRKWLVGTTMVLNRADECRQRADECRGSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT*
Ga0126383_106313182	3300010398	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTSQQVSTLSGSAEPRPA*
Ga0124844_10012543	3300010868	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSGSWAGPRPA*
Ga0126369_102537871	3300012971	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQVSALSGSLAGPRPA*
Ga0126369_131339582	3300012971	Tropical Forest Soil	APKMALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126369_133783742	3300012971	Tropical Forest Soil	MVLNRADECRQRADECRGSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTR
Ga0182036_101199472	3300016270	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAIAPTKPILRTTQQVSTFGGSAEPRPA
Ga0182036_106931561	3300016270	Soil	AMVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0182035_100820961	3300016341	Soil	LNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0182035_119520972	3300016341	Soil	ECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Ga0182032_104667712	3300016357	Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTRAT
Ga0182034_104801872	3300016371	Soil	RKWLGTTMVLNRADECRQRADECRRSAAQVADDMLRVTYLDLAHRWRMMAHEAELLEQKAMGPPKSTSRTAENVSAVLSGSWAGTRAT
Ga0182034_110639071	3300016371	Soil	VRLRKWLGTTMVLNRADECRQRADECRRSATQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVFSSSWAGTRAT
Ga0182034_115945541	3300016371	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKAIPRTAEQVFALSGSRPRPV
Ga0182037_104884572	3300016404	Soil	MVLNRADECRQRANECRRRAAQVADDVLRVTYLDLARRWRVMAHEAELLERKAMGPLKSTPRAAEQVSALGGLWARSRAT
Ga0182037_109521371	3300016404	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA
Ga0182039_100979142	3300016422	Soil	MVLNRADECRQRADECRRSAAQVANDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0182039_105501231	3300016422	Soil	RADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0182038_110698272	3300016445	Soil	AIFAAMCLLSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0182038_111864761	3300016445	Soil	MALNRPDECRQRADECRRSAAQVADDVLRETYLDLARRWRMMAHEAELLERKAVGPPKPTPRTGEQVSALSGLWARPRSDVA
Ga0187779_102173912	3300017959	Tropical Peatland	MVPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAREAESLERKAVGPTKPMPRTAEQVFALSGSGPRPL
Ga0187780_103880192	3300017973	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWREMAHEAESLERKAVGPTKPMPRTAEQVFALSGSGPRPL
Ga0187767_102171921	3300017999	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAREAESLERKAVGPTKPMPRTAEPVFALSGSGPRPV
Ga0187766_100468313	3300018058	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAQSLQRKAAGPTKPMPRTAEPVFALSGSGPRPV
Ga0126371_101513043	3300021560	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA
Ga0126371_101998645	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM
Ga0126371_103890023	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRTMAHEAELLERKAMGPPKSTSRTAENVSAVLSG
Ga0126371_124517551	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKALAPNETNSRTAQQVSALSGSWAGPRPA
Ga0207722_10049591	3300027003	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0207806_10108611	3300027049	Tropical Forest Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAAGPTKPIPRTAEQVFALSGSGPRPV
Ga0207826_10836931	3300027680	Tropical Forest Soil	RADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0207862_10078361	3300027703	Tropical Forest Soil	MVRNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRTMAHEAESLERKAMGPTKPIPRTAEQVCALGGSWAGARAGVA
Ga0170834_1101463621	3300031057	Forest Soil	MVLNRADECRQRADECRSGAAQAADDVLRVTYLDLARRWRKMALEAESLERKAAGPTKQMPRIAEQVFALSGTGPRPA
Ga0318516_101819742	3300031543	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318516_103225232	3300031543	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0318516_103555421	3300031543	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0318541_101416881	3300031545	Soil	MVLNPAAECRQRADECRRSAAQVTDDVLRVTYLDLARRWRMMAHQAESLERKATSATKPASPIAEQ
Ga0318541_104196722	3300031545	Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318541_107287591	3300031545	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQ
Ga0318538_105646052	3300031546	Soil	MVLNRADECRQRADECRRSATQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318573_105543451	3300031564	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0310915_100833525	3300031573	Soil	MPVCTFTEVAWGTTMVLNRADECRHRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310915_103729212	3300031573	Soil	MVLNRADECRQRANECRRRAAQVADDVLRVTYLDLARRWRVMAHEAELLERKAMGPLKSTPRAAEQVSALGGFWARSRAT
Ga0310915_112809341	3300031573	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKPIPRTAEQVFALSGSRP
Ga0318574_101570761	3300031680	Soil	MMLNRVDECRQRANECRRRAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318572_103479371	3300031681	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318501_103206012	3300031736	Soil	ITMVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318501_105241812	3300031736	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKALVPTKPIPRTAQQVSALSGSWAGPRPA
Ga0318509_100858571	3300031768	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0318547_102638241	3300031781	Soil	VITMVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318529_102278651	3300031792	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318529_102296691	3300031792	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVST
Ga0318576_106284461	3300031796	Soil	ARLYVYGGGLGATMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0306919_100051841	3300031879	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPR
Ga0306919_104508391	3300031879	Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0306919_106666151	3300031879	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSAFSGLRGGPRPA
Ga0318544_103989632	3300031880	Soil	MVLNRADECRQRADECRRAAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVPALSGSWAGPRPA
Ga0306925_100970276	3300031890	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0306925_105388923	3300031890	Soil	MALNRPDECRQRADECRRSAAQVADDVLRETYLDLARRWRMMAHEAELLERKTVGPPKSTPRTGEQVSALSGLWARPRSDVA
Ga0306921_102485491	3300031912	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLAHRWRKMAHEAESLERKAAGPTKPIPLTAEHVFALSGSEPRPV
Ga0306921_103330261	3300031912	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Ga0306921_123530891	3300031912	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKPIPRTAEQVFALSGSRPRPV
Ga0310912_107056311	3300031941	Soil	STSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310916_100482201	3300031942	Soil	MVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310913_103821231	3300031945	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVPALSGSWAGPRPA
Ga0310913_107350231	3300031945	Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGPRPA
Ga0310910_103035801	3300031946	Soil	MVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0310910_105518713	3300031946	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPR
Ga0310910_108578502	3300031946	Soil	FVISAAMCLFSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0306926_106121414	3300031954	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLG
Ga0306926_125778181	3300031954	Soil	MVLNPADECRQRADECRRSAAQVTDDVLRVTYLDLARRWRMMAHQAESLERKATSATKPASHTAEQVSASRGF
Ga0306922_111923482	3300032001	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTF
Ga0318558_105794071	3300032044	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318505_104068581	3300032060	Soil	QRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318510_102718102	3300032064	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA
Ga0318577_100525311	3300032091	Soil	MIPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318540_100657261	3300032094	Soil	RADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318540_101763692	3300032094	Soil	ITMVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0306920_1005939653	3300032261	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQVSALSGLRGGPRPA
Ga0306920_1015037252	3300032261	Soil	LFSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0306920_1024542601	3300032261	Soil	MVLNRPDECRQRADECRRRAAQVADDVLRVTYLDLARRWRVMAHEAEMLERKAVGPPKSTPRTALGG
Ga0310914_104641041	3300033289	Soil	MVLNRPDECRQRADECRRRAAQVADDVLRVTYLDLARRWRVMAHEAEMLERKAVGPPKSTPRTAEQVSALGGLWARSRAT
Ga0310914_112490781	3300033289	Soil	SSGSCAIFAAMCLLSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0310914_115283002	3300033289	Soil	YLLQMCLFSTSVARMPVCTVTAVAWRTTMVLNRADECRQRADECRRSAAQATDDVLRATYLDLARRWRMMAHEAESMERKAMGLTKPIPRTAERVSALSGSWAGPRPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences