Metagenome Family F088048

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088048
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	42 residues
Representative Sequence	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEPNYTAVR
Number of Associated Samples	55
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.96 %
% of genes near scaffold ends (potentially truncated)	46.79 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (79.817 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (34.862 % of family members)
Environment Ontology (ENVO)	Unclassified (52.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.23% β-sheet: 0.00% Coil/Unstructured: 63.77%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF14110	DUF4282	4.59
PF02560	Cyanate_lyase	0.92
PF00589	Phage_integrase	0.92
PF00535	Glycos_transf_2	0.92
PF02353	CMAS	0.92
PF04226	Transgly_assoc	0.92
PF07690	MFS_1	0.92
PF07045	DUF1330	0.92
PF01391	Collagen	0.92
PF06577	EipA	0.92
PF13410	GST_C_2	0.92
PF11154	DUF2934	0.92
PF01068	DNA_ligase_A_M	0.92
PF13202	EF-hand_5	0.92
PF17201	Cache_3-Cache_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.92
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.92
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.92
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.92
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.92
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
All Organisms	root	All Organisms	20.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
cellular organisms	root	All Organisms → cellular organisms	20.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.93 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.17 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.92 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.67 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.75 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	0.92 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.75 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.75 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.92 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.75 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.83 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.92 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.82 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.75 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1.83 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.92 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10013857	Not Available	1942	Open in IMG/M
3300004633\|Ga0066395_10152172	Not Available	1173	Open in IMG/M
3300004633\|Ga0066395_10837989	Not Available	554	Open in IMG/M
3300004633\|Ga0066395_10970975	Not Available	517	Open in IMG/M
3300005332\|Ga0066388_100295394	Not Available	2264	Open in IMG/M
3300005332\|Ga0066388_100454288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1922	Open in IMG/M
3300005332\|Ga0066388_101606934	Not Available	1144	Open in IMG/M
3300005332\|Ga0066388_101683533	Not Available	1121	Open in IMG/M
3300005332\|Ga0066388_101989075	Not Available	1041	Open in IMG/M
3300005332\|Ga0066388_102113366	Not Available	1013	Open in IMG/M
3300005332\|Ga0066388_102304860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	974	Open in IMG/M
3300005332\|Ga0066388_102802876	Not Available	890	Open in IMG/M
3300005332\|Ga0066388_102964072	Not Available	867	Open in IMG/M
3300005332\|Ga0066388_103292063	Not Available	825	Open in IMG/M
3300005332\|Ga0066388_103821673	Not Available	768	Open in IMG/M
3300005332\|Ga0066388_104127708	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005332\|Ga0066388_104467781	Not Available	712	Open in IMG/M
3300005332\|Ga0066388_107368254	Not Available	552	Open in IMG/M
3300005332\|Ga0066388_108698071	Not Available	504	Open in IMG/M
3300005764\|Ga0066903_101346049	Not Available	1337	Open in IMG/M
3300005764\|Ga0066903_101785869	Not Available	1174	Open in IMG/M
3300005764\|Ga0066903_101795045	Not Available	1171	Open in IMG/M
3300005764\|Ga0066903_101888449	Not Available	1144	Open in IMG/M
3300005764\|Ga0066903_102132636	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1079	Open in IMG/M
3300005764\|Ga0066903_102561068	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300005764\|Ga0066903_102841943	Not Available	939	Open in IMG/M
3300005764\|Ga0066903_102890825	Not Available	931	Open in IMG/M
3300005764\|Ga0066903_103458712	Not Available	851	Open in IMG/M
3300005764\|Ga0066903_104161486	Not Available	774	Open in IMG/M
3300005764\|Ga0066903_104478421	Not Available	745	Open in IMG/M
3300005764\|Ga0066903_104792341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	719	Open in IMG/M
3300005764\|Ga0066903_106284275	Not Available	620	Open in IMG/M
3300005764\|Ga0066903_106772726	Not Available	596	Open in IMG/M
3300005764\|Ga0066903_107796265	Not Available	550	Open in IMG/M
3300005764\|Ga0066903_107951254	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_107971884	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_108777817	Not Available	513	Open in IMG/M
3300006046\|Ga0066652_100126526	Not Available	2107	Open in IMG/M
3300010043\|Ga0126380_12173122	Not Available	512	Open in IMG/M
3300010046\|Ga0126384_10578493	Not Available	980	Open in IMG/M
3300010048\|Ga0126373_10158305	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300010162\|Ga0131853_11366754	Not Available	520	Open in IMG/M
3300010358\|Ga0126370_11948822	Not Available	573	Open in IMG/M
3300010360\|Ga0126372_10142303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300010361\|Ga0126378_10083934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	3094	Open in IMG/M
3300010361\|Ga0126378_10232399	Not Available	1932	Open in IMG/M
3300010366\|Ga0126379_10849018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1014	Open in IMG/M
3300010366\|Ga0126379_11639979	Not Available	748	Open in IMG/M
3300010376\|Ga0126381_100270729	Not Available	2312	Open in IMG/M
3300010376\|Ga0126381_101579789	Not Available	948	Open in IMG/M
3300010376\|Ga0126381_102070030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	820	Open in IMG/M
3300012207\|Ga0137381_10465871	Not Available	1103	Open in IMG/M
3300012208\|Ga0137376_11401269	Not Available	590	Open in IMG/M
3300012356\|Ga0137371_11178026	Not Available	573	Open in IMG/M
3300012971\|Ga0126369_11091688	Not Available	887	Open in IMG/M
3300012971\|Ga0126369_12391890	Not Available	614	Open in IMG/M
3300016270\|Ga0182036_11368399	Not Available	592	Open in IMG/M
3300016294\|Ga0182041_12172872	Not Available	518	Open in IMG/M
3300016319\|Ga0182033_11588495	Not Available	591	Open in IMG/M
3300016357\|Ga0182032_11454175	Not Available	594	Open in IMG/M
3300016371\|Ga0182034_10865608	Not Available	776	Open in IMG/M
3300016404\|Ga0182037_10878517	Not Available	776	Open in IMG/M
3300016445\|Ga0182038_10909199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300017823\|Ga0187818_10569661	Not Available	511	Open in IMG/M
3300017970\|Ga0187783_10001771	All Organisms → cellular organisms → Bacteria	16010	Open in IMG/M
3300017970\|Ga0187783_10204533	Not Available	1450	Open in IMG/M
3300017970\|Ga0187783_10228460	Not Available	1363	Open in IMG/M
3300017970\|Ga0187783_10556981	Not Available	830	Open in IMG/M
3300017970\|Ga0187783_10676552	Not Available	745	Open in IMG/M
3300018060\|Ga0187765_10163900	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	1263	Open in IMG/M
3300018431\|Ga0066655_10646295	Not Available	715	Open in IMG/M
3300021560\|Ga0126371_10393361	Not Available	1527	Open in IMG/M
3300021560\|Ga0126371_10787751	Not Available	1097	Open in IMG/M
3300021560\|Ga0126371_11363543	Not Available	841	Open in IMG/M
3300021560\|Ga0126371_13672104	Not Available	518	Open in IMG/M
3300026895\|Ga0207758_1011276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	906	Open in IMG/M
3300026942\|Ga0207783_1021058	Not Available	644	Open in IMG/M
3300031545\|Ga0318541_10095083	Not Available	1594	Open in IMG/M
3300031561\|Ga0318528_10519898	Not Available	639	Open in IMG/M
3300031564\|Ga0318573_10665538	Not Available	560	Open in IMG/M
3300031668\|Ga0318542_10681935	Not Available	537	Open in IMG/M
3300031724\|Ga0318500_10020046	Not Available	2543	Open in IMG/M
3300031744\|Ga0306918_10085628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2205	Open in IMG/M
3300031744\|Ga0306918_10213797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1458	Open in IMG/M
3300031747\|Ga0318502_10920217	Not Available	532	Open in IMG/M
3300031771\|Ga0318546_10635663	Not Available	751	Open in IMG/M
3300031781\|Ga0318547_10192691	Not Available	1215	Open in IMG/M
3300031782\|Ga0318552_10604174	Not Available	560	Open in IMG/M
3300031792\|Ga0318529_10441267	Not Available	606	Open in IMG/M
3300031796\|Ga0318576_10102484	Not Available	1307	Open in IMG/M
3300031835\|Ga0318517_10498185	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300031942\|Ga0310916_10052929	Not Available	3111	Open in IMG/M
3300031942\|Ga0310916_11244336	Not Available	614	Open in IMG/M
3300031954\|Ga0306926_12131726	Not Available	626	Open in IMG/M
3300031954\|Ga0306926_12257475	Not Available	604	Open in IMG/M
3300031959\|Ga0318530_10500533	Not Available	505	Open in IMG/M
3300032041\|Ga0318549_10028386	Not Available	2186	Open in IMG/M
3300032041\|Ga0318549_10121005	Not Available	1153	Open in IMG/M
3300032051\|Ga0318532_10119485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300032067\|Ga0318524_10514868	Not Available	628	Open in IMG/M
3300032094\|Ga0318540_10115317	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300032094\|Ga0318540_10461105	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300032261\|Ga0306920_100326820	Not Available	2283	Open in IMG/M
3300032261\|Ga0306920_100984164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1229	Open in IMG/M
3300032261\|Ga0306920_101768696	Not Available	873	Open in IMG/M
3300032261\|Ga0306920_102105655	Not Available	787	Open in IMG/M
3300032261\|Ga0306920_103255983	Not Available	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.17%
Aquatic	Environmental → Aquatic	0.92%
Arthropoda	Host-Associated → Arthropoda	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.17%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.80%
Loam	Environmental → Terrestrial → Soil → Loam	34.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	34.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	34.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300026942	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100138576	3300000793	Forest Soil	MRYIAYGLAIIAAGFVLAFMATDLPRDATASHNEPNYTAVR*
Ga0066395_101521721	3300004633	Tropical Forest Soil	MRYIAYGLAIIAAGFVLAFMATDLPRDTTASHNEPNYTAVR*
Ga0066395_108379891	3300004633	Tropical Forest Soil	MRYIAYGLAILAAVCAIAFTTGNLPRGATASHNDSNYTAVR*
Ga0066395_109709751	3300004633	Tropical Forest Soil	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR*
Ga0066388_1002953942	3300005332	Tropical Forest Soil	MRYIAYGLAVFAAGFVLAFTTGYLSRHGTASHFNEFNYTTVR*
Ga0066388_1004542883	3300005332	Tropical Forest Soil	MRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR*
Ga0066388_1016069341	3300005332	Tropical Forest Soil	FKPLGPHGAYPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR*
Ga0066388_1016835333	3300005332	Tropical Forest Soil	MRYIAYGLAILAAVLAILFVTGNLSRNATATSHHESNYTAVH*
Ga0066388_1019890751	3300005332	Tropical Forest Soil	MIISTLGPTHGGYPMRYIAYGLAIAYGLAIVVATVFTVAFATGYLPRDATIASHNEPNYTAVR*
Ga0066388_1021133661	3300005332	Tropical Forest Soil	MRYIAYGLALLAAVCAIAFTTGNLPRDATASHNDYTAVR*
Ga0066388_1023048601	3300005332	Tropical Forest Soil	YIAYGLAIFAAVFVIAFTTGYLPRDAAASHNEPNYTAVR*
Ga0066388_1028028761	3300005332	Tropical Forest Soil	MRYIAYGLAIFAAGFVLAFTTGYLSRHGTASHFNEFNYTAVR*
Ga0066388_1029640722	3300005332	Tropical Forest Soil	MRYIAYALAIFAAVFVLAFTIGFLPRDATASHNESYYTAVR*
Ga0066388_1032920631	3300005332	Tropical Forest Soil	LMRYLASGLAILAAVCAIAFTTGNLPRGATASHNDSNYTAVR*
Ga0066388_1038216731	3300005332	Tropical Forest Soil	FKPLGPHGAYPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHHEANKTAVR*
Ga0066388_1041277081	3300005332	Tropical Forest Soil	MRYIAYGLAIFAALLAIIFVTGNLSRDATASHNYSNYTAVR*
Ga0066388_1044677812	3300005332	Tropical Forest Soil	MRYIAYGLAILAAVFVLAFMATYLPRDATASHNEPNYTAVR*
Ga0066388_1073682541	3300005332	Tropical Forest Soil	MRYIAYGLAILAAVSVLAFTTGYLPRDATALHFNEPNYTAVR*
Ga0066388_1086980711	3300005332	Tropical Forest Soil	MRYIAYGLAILAAVCAIAFTAGNLPRDATASHNDYTAVR*
Ga0066903_1013460491	3300005764	Tropical Forest Soil	KPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR*
Ga0066903_1017858695	3300005764	Tropical Forest Soil	MRYIAYGLAIIAAGFVLAFMATDLPRDATASHNEPNYTA
Ga0066903_1017950452	3300005764	Tropical Forest Soil	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEPNYTAVR*
Ga0066903_1018884493	3300005764	Tropical Forest Soil	MRYIAYGLAILAAVLTIAFITGNPPRDANASHNDPNYTAVR*
Ga0066903_1021326361	3300005764	Tropical Forest Soil	MHGAYPMRYIAYGLGIFAAVFVIAFTTGYLPRDATASHNEPNYTAVR*
Ga0066903_1025610682	3300005764	Tropical Forest Soil	MRYIAYGLAIFAAVFIIAFTTGYLPRDATASHNEPNYTAVR*
Ga0066903_1028419432	3300005764	Tropical Forest Soil	MRYIAYGLAIFAAGFVLAFTTGYLSRHGTASHFNEFNYTAVRLV*
Ga0066903_1028908252	3300005764	Tropical Forest Soil	MRYIAYGLAILAAVCAIAFTTGNLPRGATASHNNYTAVR*
Ga0066903_1034587122	3300005764	Tropical Forest Soil	MRYITYGLAIFAAAFVLAFMAGYLPRDATASHNEPNYTAVR*
Ga0066903_1041614862	3300005764	Tropical Forest Soil	MRYIAYGLAVFAAGFVLAFTTGYLSRHGTASHFNEFNYTAVR*
Ga0066903_1044784213	3300005764	Tropical Forest Soil	RETSGANASSKPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEPNYTAVR*
Ga0066903_1047923411	3300005764	Tropical Forest Soil	MRYIAYGLAILAAVCAIAFTAGNLPRDATASHNNYTAVR*
Ga0066903_1062842752	3300005764	Tropical Forest Soil	MRYLAYGLAILAAVCTIAFTTGNLPRGATASHNDSNYTAIR*
Ga0066903_1067727262	3300005764	Tropical Forest Soil	RKLMRYIAYGLAILAAVCAIAFTTGNLPRDATASHNNYTAVR*
Ga0066903_1077962652	3300005764	Tropical Forest Soil	MRYLACGLAILAAVCAIAFTTGNLPRGATASHIDSNYTAVR*
Ga0066903_1079512541	3300005764	Tropical Forest Soil	NPMRYIAYGLAILAAVCAIAFTTGNLPRDATASHNDSNYTAVR*
Ga0066903_1079718841	3300005764	Tropical Forest Soil	MRYLAYGLAILAAVCAIAFTTDNLPRGATASHNDSNYTAVR*
Ga0066903_1087778171	3300005764	Tropical Forest Soil	MRYLAYGLAILAAVCAVAFTTDNLPRGATASHNDSNYTAVR*
Ga0066652_1001265262	3300006046	Soil	MRYIAYGLAILAAVSAVAFTTGYLPRDATASHHENNDTTNTK*
Ga0126380_121731221	3300010043	Tropical Forest Soil	GLAILAAVCAVAFTTGNLPRGATASHNDSNYTAVR*
Ga0126384_105784933	3300010046	Tropical Forest Soil	GANVLSKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR*
Ga0126373_101583053	3300010048	Tropical Forest Soil	MRYIAYGLAILAAVCAIAFTTGNLPRGATASHNDYTAVR*
Ga0131853_113667541	3300010162	Termite Gut	VHYIAYGLAIFAAVLAIVFVTGNLSRDAAASHNDPNYTAIR*
Ga0126370_119488222	3300010358	Tropical Forest Soil	AVMRYIAYGLAIIAAGFVLAFMATDLPRDATASHNEPNYTAVR*
Ga0126372_101423033	3300010360	Tropical Forest Soil	MRYLAYGLAILAAVFVLAFTTGFLPRDATASHNEPNYTAVR*
Ga0126378_100839341	3300010361	Tropical Forest Soil	ISGANASSKPMRYIAYGLAIFAAVFVIAFTTGYLPRDAAASHNEPNYTAVR*
Ga0126378_102323991	3300010361	Tropical Forest Soil	MRYLAYGLAILAAVFVLAFTTGFLPRDATALHNEPNYTAVR*
Ga0126379_108490184	3300010366	Tropical Forest Soil	MRYIAYGLAIFAAVLAIAFTTGNLPRDATASHNETNDTM
Ga0126379_116399791	3300010366	Tropical Forest Soil	LCSPGPMYYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEPIYTAVR*
Ga0126381_1002707291	3300010376	Tropical Forest Soil	MRYIAYGLAIFAAVLAILFVTGNLSRNATATSHHESNYTAVH*
Ga0126381_1015797891	3300010376	Tropical Forest Soil	VHYIAYGLAIFAALLAIVFVTGNLHRDANASHNDPNYTAIR*
Ga0126381_1020700301	3300010376	Tropical Forest Soil	ASSKPMRYIAYGLAIFAAVFVIAFTTGYLPRDAAASHNEPNYTAVR*
Ga0137381_104658711	3300012207	Vadose Zone Soil	MRYIAYGLAIFAAVLTVAFTTGYLPRDATASHNETNDTMNVLQ
Ga0137376_114012691	3300012208	Vadose Zone Soil	MRYIAYGLAIFAAVLTVAFTTGYLPRDATASHNET
Ga0137371_111780261	3300012356	Vadose Zone Soil	MRYIAYGLAIFAVVLTVAFATGFLPRDATASHNDTNDTMNVLK
Ga0126369_110916881	3300012971	Tropical Forest Soil	MRYIAYGLAIIAAGFVLAFMATDLPRDATASHNEPN
Ga0126369_123918901	3300012971	Tropical Forest Soil	SGRWGKRALRKPMRYIAYGLAIFAAVFIIAFTTGYLPRDATASHNEPNYTAVR*
Ga0182036_113683991	3300016270	Soil	MRYIVGLAIFAAMFTVAFATSYLPLDATPSHNETNDT
Ga0182041_121728721	3300016294	Soil	MRYIAYGLAILAAVFVLAFMATYLPRDATASHNEPNYTAVR
Ga0182033_115884951	3300016319	Soil	MRYIAYGLAIFAAVLTVAFTANYLPRDATASHNETNDTMN
Ga0182032_114541752	3300016357	Soil	AANGFAFAYGLAIIAAGFVLAFMATDLPRDATASHNEPNYTAVR
Ga0182034_108656081	3300016371	Soil	MRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEP
Ga0182037_108785171	3300016404	Soil	ANVLSKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR
Ga0182038_109091991	3300016445	Soil	SKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR
Ga0187818_105696611	3300017823	Freshwater Sediment	MRYIVGATILAAVVAVAIGTGRLPRIATASHNDAND
Ga0187783_1000177129	3300017970	Tropical Peatland	MHYIAYGLAVFAAVLAIVFVTGNLPRDAAASHNDPNYTAIR
Ga0187783_102045332	3300017970	Tropical Peatland	MHYIAYGFAIFAAVLAIVFVTGNVPRDATASHNDPNYTAIR
Ga0187783_102284603	3300017970	Tropical Peatland	MHYIGYGLAIFAAVLAIVFVTGNLPRDANASHSDPNYTAIR
Ga0187783_105569813	3300017970	Tropical Peatland	MHYIAYGLAIFAAVLAIVFVTGNLPRDATASLNDPNYTAIR
Ga0187783_106765521	3300017970	Tropical Peatland	MQYIISGLAIFAAVLAIVFVTGNLPPDATASHSGPNYTAIR
Ga0187765_101639001	3300018060	Tropical Peatland	MHHIAYGLAILAAVLAIVFVTGKLPRDATASHNDPNYTAIR
Ga0066655_106462951	3300018431	Grasslands Soil	MRYLAYGLAILAAVSAVAFTTGYLPRDATASHHENND
Ga0126371_103933611	3300021560	Tropical Forest Soil	MRYLASGLAILAAVCAIAFTTGNLPRGATASHNDSNYTAVR
Ga0126371_107877512	3300021560	Tropical Forest Soil	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR
Ga0126371_113635431	3300021560	Tropical Forest Soil	MRYIAYGLAIIAAGFVLAFMATDLPRDATASHNEPNYTAVR
Ga0126371_136721042	3300021560	Tropical Forest Soil	MRYIAYGLAILAAVSVLAFTTGYLPRDATALHFNEPNYTAVR
Ga0207758_10112761	3300026895	Tropical Forest Soil	MLHRLRLAIFAAVLTVAFTAGYLPRDATASHNETNG
Ga0207783_10210583	3300026942	Tropical Forest Soil	MRYIAYGLAIFAAVLAIALTTSNLPRDATASHNETND
Ga0318541_100950831	3300031545	Soil	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANY
Ga0318528_105198981	3300031561	Soil	GPHGAYPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR
Ga0318573_106655381	3300031564	Soil	IQPLGPHGAYPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR
Ga0318542_106819351	3300031668	Soil	MRYIAYGLAIFAAVLAIAFTSGNLPRDATASHDETNDTMN
Ga0318500_100200461	3300031724	Soil	MRYIAYGLAIITAGFVLAFMATDLPRDATASHNEPNYTAVR
Ga0306918_100856286	3300031744	Soil	MRYIAYGLAILAAVCAIAFTAGNLPRDATASHNNYTAVR
Ga0306918_102137973	3300031744	Soil	MRYIAYGLAIFAAVLTVAFTAGYLPRDATASHNETNDAINVLQ
Ga0318502_109202173	3300031747	Soil	NILSKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR
Ga0318537_100813831	3300031763	Soil	MRYIAYGLAIFAAVLTVAFTAGYLPRDATASHNETNDAINVLQLE
Ga0318546_106356631	3300031771	Soil	FRTSGANAFRKLMRYIAYGLAILAAVCAIAFTAGNLPRDATASHNNYTAVR
Ga0318547_101926913	3300031781	Soil	SGANAFRKLMRYIAYGLAILAAVCAIAFTAGNLPRDATASHNNYTAVR
Ga0318552_106041743	3300031782	Soil	ITIVIQAPGANVLSKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR
Ga0318529_104412672	3300031792	Soil	MRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEAN
Ga0318576_101024842	3300031796	Soil	MRYLAYGLAILAAVCTIAFTTGNLPRGATASHNDSNYTAIR
Ga0310917_105163963	3300031833	Soil	MRYIAYGLAIFAAVLAIAFTSGNLPRDATASHDETNDTMNVLQLE
Ga0318517_104981852	3300031835	Soil	MRYIAYGLAIFAAVLAIAFTTGNLPRDATASHNDTN
Ga0310916_100529293	3300031942	Soil	MRYIAYGLAIIAAGFALAFIATDLPRDATASHNEPNYTAVR
Ga0310916_112443361	3300031942	Soil	MRYIAYGLAILAAVFVLAFTTGFLPLDATASHNEPNYTAVR
Ga0306926_121317261	3300031954	Soil	MRYIAYGLAILAAGFVLAFMATYLPRDATASHNEPNYTAVR
Ga0306926_122574751	3300031954	Soil	MHGENPMRYIAYGLAIFAAVFALAFTTGYLPRDATASHNEPYYTAVR
Ga0318530_105005332	3300031959	Soil	FLITIVIQAPGANILSKPMRYIAYGLAILAAASVLAFTTGYLPRDATASHNNEPYYTAVR
Ga0318549_100283861	3300032041	Soil	MRYIAYGLAIIAAVFVLAFMATDLPRDATASHNEPNYTAVR
Ga0318549_101210053	3300032041	Soil	AYGLAIITAGFVLAFMATDLPRDATASHNEPNYTAVR
Ga0318532_101194853	3300032051	Soil	MRYIAYGLAIFAAVLTVAFTAGYLPRDATASHNETNDAI
Ga0318524_105148681	3300032067	Soil	GVLLPMRYIAYGLAIFAAVFVIAFTTGYLPRDATASHNEANYTAVR
Ga0318540_101153172	3300032094	Soil	MRYIAYGLAILAAVCTIAFTAGNLPRDATASHNNYTAVR
Ga0318540_104611052	3300032094	Soil	MRYIAYGLAIFAAVLTVAFTAGYLPRDATASHNETNDAIN
Ga0306920_1003268203	3300032261	Soil	MRYLAYGLAILAAVCAIAFTTGNLPRGATASHNDYTAVR
Ga0306920_1009841642	3300032261	Soil	MRYIAYGLAIFAAVFALAFTTGYLPRDATASHNEPYYTAVR
Ga0306920_1017686962	3300032261	Soil	MRYIAYGLAIFAALFAIAFTTGNLPRDATASHDGTSVDAAINATV
Ga0306920_1021056551	3300032261	Soil	MHYIAYGLAIFAAVLAVVFVTGNLPRDATASHNDPNYTAIR
Ga0306920_1032559832	3300032261	Soil	MRYIAYGLAILAAVLTVAFTTGYLPRDATASHNETNDTMN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences