Metagenome / Metatranscriptome Family F088050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088050
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	67 residues
Representative Sequence	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Number of Associated Samples	70
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.26 %
% of genes near scaffold ends (potentially truncated)	93.58 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.376 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.872 % of family members)
Environment Ontology (ENVO)	Unclassified (68.807 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.211 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.06% β-sheet: 16.18% Coil/Unstructured: 61.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04218	CENP-B_N	4.59
PF04392	ABC_sub_bind	2.75
PF00005	ABC_tran	1.83
PF14255	Cys_rich_CPXG	1.83
PF06568	DUF1127	1.83
PF03401	TctC	0.92
PF00486	Trans_reg_C	0.92
PF13185	GAF_2	0.92
PF01527	HTH_Tnp_1	0.92
PF00816	Histone_HNS	0.92
PF06808	DctM	0.92
PF11161	DUF2944	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.75
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	1.83
COG2916	DNA-binding protein H-NS	Transcription [K]	0.92
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
All Organisms	root	All Organisms	48.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
cellular organisms	root	All Organisms → cellular organisms	48.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.01 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.34 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.01 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.01 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.01 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.83 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.01 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.83 %
Streptomyces sp. Tu6071	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10062874	Not Available	948	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10083169	Not Available	800	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10105826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	691	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1085852	Not Available	552	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10110159	Not Available	578	Open in IMG/M
3300000956\|JGI10216J12902_104223563	Not Available	613	Open in IMG/M
3300002245\|JGIcombinedJ26739_101662060	Not Available	537	Open in IMG/M
3300005332\|Ga0066388_105555810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300005332\|Ga0066388_106494169	Not Available	589	Open in IMG/M
3300005332\|Ga0066388_106583883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300005332\|Ga0066388_107169255	Not Available	560	Open in IMG/M
3300005363\|Ga0008090_10212032	Not Available	792	Open in IMG/M
3300005518\|Ga0070699_102116119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	514	Open in IMG/M
3300005713\|Ga0066905_100292163	Not Available	1275	Open in IMG/M
3300005713\|Ga0066905_101501337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	613	Open in IMG/M
3300005713\|Ga0066905_102207630	Not Available	513	Open in IMG/M
3300005764\|Ga0066903_100789963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1695	Open in IMG/M
3300005764\|Ga0066903_101712993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1197	Open in IMG/M
3300005764\|Ga0066903_104235880	Not Available	767	Open in IMG/M
3300005764\|Ga0066903_105594582	Not Available	662	Open in IMG/M
3300005764\|Ga0066903_108974568	Not Available	506	Open in IMG/M
3300010043\|Ga0126380_10600886	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300010048\|Ga0126373_11746404	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010359\|Ga0126376_12486689	Not Available	565	Open in IMG/M
3300010360\|Ga0126372_10678640	Not Available	1002	Open in IMG/M
3300010360\|Ga0126372_11156667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300010360\|Ga0126372_12661108	Not Available	552	Open in IMG/M
3300010361\|Ga0126378_11839749	Not Available	689	Open in IMG/M
3300010362\|Ga0126377_10635648	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300010366\|Ga0126379_10927581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300010376\|Ga0126381_100843898	All Organisms → cellular organisms → Bacteria → Proteobacteria	1317	Open in IMG/M
3300010863\|Ga0124850_1036584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1565	Open in IMG/M
3300012971\|Ga0126369_11659729	Not Available	728	Open in IMG/M
3300016270\|Ga0182036_10284213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1252	Open in IMG/M
3300016270\|Ga0182036_10555754	Not Available	915	Open in IMG/M
3300016294\|Ga0182041_10466099	Not Available	1088	Open in IMG/M
3300016294\|Ga0182041_10576175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	986	Open in IMG/M
3300016294\|Ga0182041_11394499	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300016294\|Ga0182041_12170035	Not Available	519	Open in IMG/M
3300016319\|Ga0182033_11478854	Not Available	613	Open in IMG/M
3300016341\|Ga0182035_10365450	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300016341\|Ga0182035_10541466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300016341\|Ga0182035_11449450	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300016357\|Ga0182032_10581000	Not Available	930	Open in IMG/M
3300016371\|Ga0182034_10309028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300016371\|Ga0182034_10458699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300016387\|Ga0182040_10304885	Not Available	1219	Open in IMG/M
3300016387\|Ga0182040_11575792	Not Available	559	Open in IMG/M
3300016404\|Ga0182037_10545745	Not Available	978	Open in IMG/M
3300016422\|Ga0182039_10357903	Not Available	1227	Open in IMG/M
3300016422\|Ga0182039_10638692	Not Available	934	Open in IMG/M
3300016422\|Ga0182039_12167525	Not Available	512	Open in IMG/M
3300016445\|Ga0182038_10418832	Not Available	1127	Open in IMG/M
3300016445\|Ga0182038_11533908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	598	Open in IMG/M
3300027874\|Ga0209465_10587378	Not Available	552	Open in IMG/M
3300031544\|Ga0318534_10092201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1730	Open in IMG/M
3300031544\|Ga0318534_10246651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300031545\|Ga0318541_10228356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300031545\|Ga0318541_10288779	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300031546\|Ga0318538_10503454	Not Available	656	Open in IMG/M
3300031564\|Ga0318573_10542051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031572\|Ga0318515_10488819	Not Available	657	Open in IMG/M
3300031573\|Ga0310915_10194017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300031573\|Ga0310915_10264935	Not Available	1210	Open in IMG/M
3300031573\|Ga0310915_10340404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300031679\|Ga0318561_10534771	Not Available	645	Open in IMG/M
3300031681\|Ga0318572_10667983	Not Available	619	Open in IMG/M
3300031682\|Ga0318560_10191469	Not Available	1091	Open in IMG/M
3300031748\|Ga0318492_10485652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031770\|Ga0318521_10161214	Not Available	1278	Open in IMG/M
3300031771\|Ga0318546_11306940	Not Available	509	Open in IMG/M
3300031792\|Ga0318529_10577765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031793\|Ga0318548_10040605	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300031797\|Ga0318550_10065550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Tu6071	1662	Open in IMG/M
3300031819\|Ga0318568_10197300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300031845\|Ga0318511_10098816	Not Available	1239	Open in IMG/M
3300031845\|Ga0318511_10402051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300031860\|Ga0318495_10417297	Not Available	590	Open in IMG/M
3300031879\|Ga0306919_10070483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2380	Open in IMG/M
3300031879\|Ga0306919_10430110	Not Available	1014	Open in IMG/M
3300031880\|Ga0318544_10158751	Not Available	868	Open in IMG/M
3300031890\|Ga0306925_10180038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2277	Open in IMG/M
3300031897\|Ga0318520_10283337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300031941\|Ga0310912_11039051	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031941\|Ga0310912_11296252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031941\|Ga0310912_11412321	Not Available	525	Open in IMG/M
3300031946\|Ga0310910_10039932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3251	Open in IMG/M
3300031946\|Ga0310910_10328240	Not Available	1207	Open in IMG/M
3300031946\|Ga0310910_10448496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300031959\|Ga0318530_10175745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300032001\|Ga0306922_10703513	Not Available	1063	Open in IMG/M
3300032010\|Ga0318569_10020165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2670	Open in IMG/M
3300032010\|Ga0318569_10237214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300032025\|Ga0318507_10310955	Not Available	685	Open in IMG/M
3300032041\|Ga0318549_10357992	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300032042\|Ga0318545_10389225	Not Available	503	Open in IMG/M
3300032043\|Ga0318556_10362066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300032051\|Ga0318532_10091216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300032051\|Ga0318532_10309721	Not Available	560	Open in IMG/M
3300032059\|Ga0318533_10752048	Not Available	715	Open in IMG/M
3300032059\|Ga0318533_10986695	Not Available	618	Open in IMG/M
3300032063\|Ga0318504_10140470	Not Available	1107	Open in IMG/M
3300032065\|Ga0318513_10224075	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300032067\|Ga0318524_10222285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300032091\|Ga0318577_10058754	Not Available	1741	Open in IMG/M
3300032094\|Ga0318540_10000369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12533	Open in IMG/M
3300032094\|Ga0318540_10130787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300033290\|Ga0318519_10957910	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.32%
Loam	Environmental → Terrestrial → Soil → Loam	14.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100628741	3300000597	Forest Soil	EAFKLRPGLTETDLEVQAAFMDVCMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
AF_2010_repII_A1DRAFT_100831693	3300000597	Forest Soil	LEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN*
AF_2010_repII_A1DRAFT_101058262	3300000597	Forest Soil	CHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVXLPYCTEATPNDGRAFNLGHKFNSLCWRKN*
AF_2010_repII_A100DRAFT_10858523	3300000655	Forest Soil	AARDVRETAECHLEAFKLRPGLTETDFEVQAAFMDFCMEARGYVFLSGCTEATPKYNLGYKFNSLCWRRN*
AF_2010_repII_A001DRAFT_101101592	3300000793	Forest Soil	YVQVQNKNELMETAARDVRETAECHLEAFKLRPGLTETDFEVQAAFMDFCMEARGYVFLSGCTEATPKYNLGYKFNSLCWRRN*
JGI10216J12902_1042235631	3300000956	Soil	DVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEGRGYVFLPGCTETTPNAGRTYNLGYKFNSICWRKN*
JGIcombinedJ26739_1016620601	3300002245	Forest Soil	AFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCPPNAGRTYNLGYKFNSLCWRKN*
Ga0066388_1055558101	3300005332	Tropical Forest Soil	MLEPGLTEKELEIQAAFMDLCMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0066388_1064941692	3300005332	Tropical Forest Soil	METAAQDVRETAECHLEAFKLRPGLTETDLEVQAVFMDICMEARGYVLLPSCNPNAGRTYNLGYKFNSLCWRKN*
Ga0066388_1065838831	3300005332	Tropical Forest Soil	RPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGDTYNLGYKFNSLCWRKN*
Ga0066388_1071692552	3300005332	Tropical Forest Soil	GLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN*
Ga0008090_102120323	3300005363	Tropical Rainforest Soil	QKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0070699_1021161192	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SQSKDSMVETAERDVRETAECHLEAFKSRPGSTETDLEVQAAFMDICMEARGYVFLPYCTEATPNDGRAFNLGHKFNSLCWRKN*
Ga0066905_1002921632	3300005713	Tropical Forest Soil	DLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN*
Ga0066905_1015013372	3300005713	Tropical Forest Soil	HVRAQSKDQVMETAARDVRETAECHLEAFKLRPGLTEMDLEVQAAFMDICMVARGYVFLRDCTETTPNAGRTYNLGYKFNSICWQKN*
Ga0066905_1022076301	3300005713	Tropical Forest Soil	DVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYSLGYKFNSLCWRKRSVVLDLFDKRFKVC*
Ga0066903_1007899634	3300005764	Tropical Forest Soil	TAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLLSCTPNAVGYKFNSLCWRKN*
Ga0066903_1017129931	3300005764	Tropical Forest Soil	KLRPGLEETDVEIQAAFMDICMAARGYVFLPSCDEGTPNASRIYNLGYKFNSICWRKK*
Ga0066903_1042358802	3300005764	Tropical Forest Soil	WRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTEKDLEVQAAFMDVCMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0066903_1055945821	3300005764	Tropical Forest Soil	EAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCTVRTPNAGHTFNLGYKFNSLCWRKN*
Ga0066903_1089745683	3300005764	Tropical Forest Soil	TAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNLGYKFNSLCWRKN*
Ga0126380_106008862	3300010043	Tropical Forest Soil	YEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDVCMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0126373_117464041	3300010048	Tropical Forest Soil	LKADSKNQMLETASRDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPGCTESTPNAGRAYSLGYKFNSICWRKN*
Ga0126376_124866892	3300010359	Tropical Forest Soil	ETAECHLEAFKLRSGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN*
Ga0126372_106786401	3300010360	Tropical Forest Soil	YEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0126372_111566671	3300010360	Tropical Forest Soil	LTKKGLEIQAAFMDLCMAARGYVFVPDCTETTASAASNPSYYYKFNSICWRKK*
Ga0126372_126611081	3300010360	Tropical Forest Soil	METAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN*
Ga0126378_118397491	3300010361	Tropical Forest Soil	TETDLEVQAAFMDICMEARGYIFLPGCAEATPNAGRAYNLGYKFNSICWRKN*
Ga0126377_106356482	3300010362	Tropical Forest Soil	WRWYEAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDVCMEARGYLFLPSWTPNAVGYKFNSLCWRKN*
Ga0126379_109275811	3300010366	Tropical Forest Soil	DTAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNLGYKFNSLCWRKK*
Ga0126381_1008438982	3300010376	Tropical Forest Soil	FKLRPGLTETDFEVQAAFMDFCMEARGYVFLPGCTEANLGYKFNSLCWRKN*
Ga0124850_10365842	3300010863	Tropical Forest Soil	METTARDVRETAKCRLEAFMLEPGLTEKELEIQAAFMDLCMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0126369_116597291	3300012971	Tropical Forest Soil	EAQSKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLPSCTPNAVGYKFNSLCWRKN*
Ga0182036_102842133	3300016270	Soil	HLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0182036_105557543	3300016270	Soil	HLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182041_104660994	3300016294	Soil	DVRETAECHLEAFKLRPGLTETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182041_105761752	3300016294	Soil	CHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPNAGRTYNLSYKFNSLCWRK
Ga0182041_113944991	3300016294	Soil	TDLEVQAAFMDICMEARGYVFLPGCTEATPNAERAYNLGYKFNSICWRKN
Ga0182041_121700351	3300016294	Soil	TAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLPSCTPNAVGYKFNSLCWRKN
Ga0182033_114788541	3300016319	Soil	VKSQSKDQMMETAERDVRETAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTH
Ga0182035_103654502	3300016341	Soil	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPNAGRTYNLSYKFNSLCWRKN
Ga0182035_105414661	3300016341	Soil	TAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0182035_114494502	3300016341	Soil	LRPGLTETDLEVQAAFMDICMEARGYVFLPGCTEATPNAERAYNLGYKFNSICWRKN
Ga0182032_105810003	3300016357	Soil	CHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182034_103090283	3300016371	Soil	VVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0182034_104586991	3300016371	Soil	VRAQSKNQMTETAARDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0182040_103048851	3300016387	Soil	TAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182040_115757922	3300016387	Soil	METAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICMEARGYIFLPGCTAATPNAGRAYNLGYKFNSICWRKN
Ga0182037_105457453	3300016404	Soil	LEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0182039_103579033	3300016422	Soil	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0182039_106386923	3300016422	Soil	GDVRETAECHLEAFKLRPGLTETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182039_121675252	3300016422	Soil	KNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYLFLPSCTPNAVGYKFNSLCWRKN
Ga0182038_104188324	3300016445	Soil	AQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0182038_115339081	3300016445	Soil	VETAERDVRETAECHLEAFMSRPGSTETDLEVQAAFMDICMEARGYVFLPDCTEATPNDGRAFNLGHKFNSLCWRKN
Ga0209465_105873781	3300027874	Tropical Forest Soil	AAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN
Ga0318534_100922015	3300031544	Soil	MTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGY
Ga0318534_102466512	3300031544	Soil	LRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318541_102283561	3300031545	Soil	DVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318541_102887791	3300031545	Soil	LEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPGCTEATPNAERAYNLGYKFNSICWRKN
Ga0318538_105034543	3300031546	Soil	TETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318573_105420511	3300031564	Soil	LEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318515_104888191	3300031572	Soil	LTETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0310915_101940171	3300031573	Soil	SKNQKMEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0310915_102649354	3300031573	Soil	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0310915_103404041	3300031573	Soil	METAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPNAGRTYNLSYKFNSLCWRKN
Ga0318561_105347712	3300031679	Soil	GLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0318572_106679831	3300031681	Soil	KNQKMETAAQDVRETAECHLEAFKLRSGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN
Ga0318560_101914694	3300031682	Soil	TAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEAQGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318492_104856521	3300031748	Soil	RDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318521_101612141	3300031770	Soil	AECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318521_101617774	3300031770	Soil	MTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATP
Ga0318546_113069401	3300031771	Soil	ETAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0318529_105777651	3300031792	Soil	LRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTHNLGYKFNSLCWRKN
Ga0318548_100406055	3300031793	Soil	LQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318550_100655501	3300031797	Soil	TETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318568_101973002	3300031819	Soil	ETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318511_100988164	3300031845	Soil	DVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318511_104020511	3300031845	Soil	HLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318495_104172971	3300031860	Soil	AQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICMEARGYIFLPGCTAATPNAGRAYNLGYKFNSICWRKN
Ga0306919_100704833	3300031879	Soil	VKSQSKDQMMETAERDVRETAECHLEAFKLRPGLTETDEEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNLGYKFNSLCWRKD
Ga0306919_104301104	3300031879	Soil	VQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318544_101587512	3300031880	Soil	PGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0306925_101800384	3300031890	Soil	VKSQSKDQMMETAERDVRETAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNLGYKFNSLCWRKD
Ga0318520_102833373	3300031897	Soil	METAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPNAGRTY
Ga0310912_110390511	3300031941	Soil	LTETDLEVQAAFMDICMEARGYVFLPGCTEATPNAERAYNLGYKFNSICWRKN
Ga0310912_112962522	3300031941	Soil	DQTMETAERDVRDTAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGRTYNLGYKFNSLCWRKN
Ga0310912_114123211	3300031941	Soil	ECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0310910_100399321	3300031946	Soil	EAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPSCNPNAGRTYNLSYKFNSLCWRKN
Ga0310910_103282401	3300031946	Soil	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVLLPSCNPNAGRTYNLGYKFNSLCWRKN
Ga0310910_104484961	3300031946	Soil	ETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318530_101757451	3300031959	Soil	MEAAAQVVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFKSL
Ga0306922_107035133	3300032001	Soil	PGLTETDLEVQAAFMDICMEARGYVLLPSCNPNAGRTYNLGYKFNSLCWRKN
Ga0318569_100201655	3300032010	Soil	MTETAAGDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318569_102372143	3300032010	Soil	DVRETAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTHNLGYKFNSLCWRKN
Ga0318507_103109553	3300032025	Soil	GLTETDLQVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318549_103579921	3300032041	Soil	VRAQSKNQMMETAAGDVRETAECHLEAFKLRPGLTETDLEVHAAFMDICMEARGYIFLPGCTAATPNAGRAYNLGYKFNSICWRKN
Ga0318545_103892252	3300032042	Soil	RWYEAQNKNQKMETAAQDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARRYVFLPSCNPNAGRTLSYKFNSLCWQKN
Ga0318556_103620661	3300032043	Soil	CHLEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318532_100912163	3300032051	Soil	MVETAERDVRETAECHLEAFKSRPGSTETDLEVQAAFMDICMEARGYVFLRGCTEEPLNAGGTHNLGYKFNSLCWRKN
Ga0318532_103097211	3300032051	Soil	YDSHLKADSKNQMLETASRDVRETAECHLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPGCTEATPNAERAYNLGYKFNSICWRKN
Ga0318533_107520481	3300032059	Soil	VKSQSKDQMMETAERDVRETAECHLEAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNL
Ga0318533_109866952	3300032059	Soil	GLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN
Ga0318504_101404701	3300032063	Soil	LEAFKLRPGLTETDLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAYNLGYKFNSICWRKN
Ga0318513_102240751	3300032065	Soil	HLEAFKLRPGLTETDLEVQAAFMDICMEARGYVFLPGCTESTPNAGRAYNLGYKFNSICWRKN
Ga0318524_102222851	3300032067	Soil	DLEVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRKN
Ga0318577_100587544	3300032091	Soil	METAERDVRDTAECHLKAFKLRPGLTETDVEIQAAFMDICMEARGYVFLRGCTEEPLNAGGTYNLGYKFNSLCWRKD
Ga0318540_100003691	3300032094	Soil	LRPGLTETDLEVQAAFMDICMAARGYVFFPDCTEATPNAGRTYNLGYKFNSICWRKN
Ga0318540_101307872	3300032094	Soil	EAFKLRPGLTETDLKVQAAFMDICMEARGYIFLPGCTEATPNAGRAHNLGYKFNSICWRK
Ga0318519_109579101	3300033290	Soil	ECHLEAFKLRSGLTETDLEVQAAFMDICMEARGYVFLPSCTPNAGRTYNLGYKFNSLCWRKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences