Metagenome / Metatranscriptome Family F088182

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088182
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	47 residues
Representative Sequence	KNALALHLLFEHPESLIDIVVANEYLQNVSNLLLALDAPSSC
Number of Associated Samples	83
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	92.66 %
% of genes from short scaffolds (< 2000 bps)	92.66 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.908 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (43.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.633 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.57% β-sheet: 0.00% Coil/Unstructured: 51.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00313	CSD	76.15
PF07369	DUF1488	11.01
PF01165	Ribosomal_S21	2.75
PF07505	DUF5131	0.92
PF08281	Sigma70_r4_2	0.92
PF01042	Ribonuc_L-PSP	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	2.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.92
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.91 %
Unclassified	root	N/A	10.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.91 %
Unclassified	root	N/A	10.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.91 %
Unclassified	root	N/A	10.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.91 %
Unclassified	root	N/A	10.09 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.03 %
Unclassified	root	N/A	10.09 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.94 %
Unclassified	root	N/A	10.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig583973	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10030881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1447	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1028971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10049308	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300000891\|JGI10214J12806_11672012	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300004633\|Ga0066395_10838817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300005186\|Ga0066676_10500193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005332\|Ga0066388_102433231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	950	Open in IMG/M
3300005332\|Ga0066388_104255999	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300005332\|Ga0066388_105422335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	646	Open in IMG/M
3300005332\|Ga0066388_105438247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300005332\|Ga0066388_106474182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	590	Open in IMG/M
3300005363\|Ga0008090_15820540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	503	Open in IMG/M
3300005598\|Ga0066706_10103608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2070	Open in IMG/M
3300005713\|Ga0066905_100331936	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300005713\|Ga0066905_100740071	Not Available	847	Open in IMG/M
3300005713\|Ga0066905_102081724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	528	Open in IMG/M
3300005764\|Ga0066903_105049090	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300005764\|Ga0066903_106360885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	616	Open in IMG/M
3300005764\|Ga0066903_106493245	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300009012\|Ga0066710_100531571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300009038\|Ga0099829_10497233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300009792\|Ga0126374_10461602	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300010043\|Ga0126380_10383507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300010043\|Ga0126380_11428585	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300010043\|Ga0126380_12049548	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300010046\|Ga0126384_10297586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1325	Open in IMG/M
3300010046\|Ga0126384_11238327	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300010046\|Ga0126384_11282537	Not Available	679	Open in IMG/M
3300010047\|Ga0126382_10143523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1623	Open in IMG/M
3300010047\|Ga0126382_10415368	All Organisms → cellular organisms → Bacteria → Proteobacteria	1055	Open in IMG/M
3300010047\|Ga0126382_10642012	Not Available	881	Open in IMG/M
3300010047\|Ga0126382_11278840	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300010358\|Ga0126370_10408517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1118	Open in IMG/M
3300010360\|Ga0126372_11378191	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300010361\|Ga0126378_10090352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2993	Open in IMG/M
3300010362\|Ga0126377_13409932	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300010376\|Ga0126381_100266461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2330	Open in IMG/M
3300010376\|Ga0126381_100556123	All Organisms → cellular organisms → Bacteria → Proteobacteria	1626	Open in IMG/M
3300010376\|Ga0126381_100632576	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300010398\|Ga0126383_10137026	All Organisms → cellular organisms → Bacteria → Proteobacteria	2261	Open in IMG/M
3300012199\|Ga0137383_11243251	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300012200\|Ga0137382_10096155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1947	Open in IMG/M
3300012211\|Ga0137377_10032390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4751	Open in IMG/M
3300012211\|Ga0137377_10921572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300012355\|Ga0137369_10701089	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300012359\|Ga0137385_10119815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2324	Open in IMG/M
3300012403\|Ga0134049_1112927	Not Available	515	Open in IMG/M
3300012532\|Ga0137373_10536661	All Organisms → cellular organisms → Bacteria → Proteobacteria	889	Open in IMG/M
3300012948\|Ga0126375_10444990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300012948\|Ga0126375_10726988	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300012975\|Ga0134110_10173572	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300015356\|Ga0134073_10336336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300015358\|Ga0134089_10322006	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300016270\|Ga0182036_10141158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1702	Open in IMG/M
3300016319\|Ga0182033_11329705	Not Available	646	Open in IMG/M
3300016371\|Ga0182034_12048106	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300016387\|Ga0182040_10109395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1893	Open in IMG/M
3300016404\|Ga0182037_10190301	Not Available	1583	Open in IMG/M
3300016422\|Ga0182039_10359211	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300021560\|Ga0126371_11229115	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300022726\|Ga0242654_10402257	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300026313\|Ga0209761_1201644	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300026371\|Ga0257179_1055852	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300026536\|Ga0209058_1194905	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300027882\|Ga0209590_10195761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1275	Open in IMG/M
3300028875\|Ga0307289_10297120	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300028878\|Ga0307278_10448060	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300031543\|Ga0318516_10187156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1193	Open in IMG/M
3300031545\|Ga0318541_10085683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1672	Open in IMG/M
3300031561\|Ga0318528_10029785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2678	Open in IMG/M
3300031561\|Ga0318528_10121908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1378	Open in IMG/M
3300031561\|Ga0318528_10599806	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300031573\|Ga0310915_10373184	Not Available	1012	Open in IMG/M
3300031668\|Ga0318542_10188819	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300031680\|Ga0318574_10912227	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300031713\|Ga0318496_10723710	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300031719\|Ga0306917_10106182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2023	Open in IMG/M
3300031719\|Ga0306917_11032306	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300031723\|Ga0318493_10787459	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031724\|Ga0318500_10425775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300031765\|Ga0318554_10430239	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300031768\|Ga0318509_10093935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1608	Open in IMG/M
3300031768\|Ga0318509_10840355	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300031770\|Ga0318521_10993580	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300031771\|Ga0318546_10232962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1264	Open in IMG/M
3300031781\|Ga0318547_10322527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300031793\|Ga0318548_10489083	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031794\|Ga0318503_10262294	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300031798\|Ga0318523_10210971	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300031833\|Ga0310917_11125788	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300031835\|Ga0318517_10107864	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300031880\|Ga0318544_10122279	All Organisms → cellular organisms → Bacteria → Proteobacteria	989	Open in IMG/M
3300031896\|Ga0318551_10386863	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300031910\|Ga0306923_11216251	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300031941\|Ga0310912_10217634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1463	Open in IMG/M
3300031941\|Ga0310912_10270608	Not Available	1311	Open in IMG/M
3300031941\|Ga0310912_10831398	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300031942\|Ga0310916_11718752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300032001\|Ga0306922_11422265	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300032025\|Ga0318507_10501103	Not Available	528	Open in IMG/M
3300032041\|Ga0318549_10164081	All Organisms → cellular organisms → Bacteria → Proteobacteria	992	Open in IMG/M
3300032043\|Ga0318556_10066886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1771	Open in IMG/M
3300032051\|Ga0318532_10199873	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300032063\|Ga0318504_10153759	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300032065\|Ga0318513_10292691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	790	Open in IMG/M
3300032261\|Ga0306920_100993425	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300032261\|Ga0306920_103591245	Not Available	571	Open in IMG/M
3300033289\|Ga0310914_10861266	Not Available	805	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.99%
Loam	Environmental → Terrestrial → Soil → Loam	11.01%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_16233140	2124908045	Soil	LHLTKNALALHLLLEDPESLIDIVVANEYLQNVSNLLLAPDAPSSC
AF_2010_repII_A1DRAFT_100308811	3300000597	Forest Soil	ALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
AF_2010_repII_A100DRAFT_10289714	3300000655	Forest Soil	AALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
AF_2010_repII_A001DRAFT_100493081	3300000793	Forest Soil	FIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
JGI10214J12806_116720123	3300000891	Soil	ALHLLLEDSESLIDIVVANDDLQNVSNLLTALDAPSSC*
Ga0066395_108388171	3300004633	Tropical Forest Soil	AGLALGRFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYPQNVSNLLLLALDAPSSC*
Ga0066676_105001933	3300005186	Soil	LAALHLTKNAFALQLLFEDPESLIDIVVANDDLQNVSNLALRAAPSSC*
Ga0066388_1024332313	3300005332	Tropical Forest Soil	HLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLAPDAPSSC*
Ga0066388_1042559992	3300005332	Tropical Forest Soil	LAGLALRRFFIRLAALHLTKNALALHLPFEDPESLIDVVVSNDDLQNVSNLLLALGAPSS
Ga0066388_1054223351	3300005332	Tropical Forest Soil	RLAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDVPSSC*
Ga0066388_1054382471	3300005332	Tropical Forest Soil	NALTLHLLLEDPERLIDIVVANDDLQNVSNLLLAPDAPSSR*
Ga0066388_1064741822	3300005332	Tropical Forest Soil	AALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLSLDAPSSC*
Ga0008090_158205402	3300005363	Tropical Rainforest Soil	LAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
Ga0066706_101036087	3300005598	Soil	FIRLAALHLTKNALALHLFLEHPESLIDIVVAYEYLQNVSNLLPTPDAPASC*
Ga0066905_1003319363	3300005713	Tropical Forest Soil	LHLSFEDPESLINIVVANEDLQNASNLLLALGAPSSC*
Ga0066905_1007400713	3300005713	Tropical Forest Soil	LHLLFEHPESLIDIVVSNEYPQNVSNLLLLALDAPSSC*
Ga0066905_1020817242	3300005713	Tropical Forest Soil	RFFIRLAALHLAKDALALQLLLEDPESLIDIVVANDDLQNVSNLLLALGAPSSC*
Ga0066903_1050490901	3300005764	Tropical Forest Soil	LLLEDLESLIDIVVSNEDLQNVPNLLLALGAPSSC*
Ga0066903_1063608851	3300005764	Tropical Forest Soil	FFIRLAALHLAKNALALHLLFEHPESLIDIVVANDDLQNVSNLLLAPDAPSSC*
Ga0066903_1064932451	3300005764	Tropical Forest Soil	LALHLLFEDSQGLIDIVVANDDLQNVSNLLPAPDAPSSC*
Ga0066710_1005315711	3300009012	Grasslands Soil	NAFALQLLFEDPESLIDIVVANDDLQNVSNLALRAAPSSCW
Ga0099829_104972334	3300009038	Vadose Zone Soil	LLFEDPKSLIDIVVANDDLQNVSNLLPAQDARSSC*
Ga0126374_104616022	3300009792	Tropical Forest Soil	TKNALALHLLFEHPESLIDIVVANEYLQNVSNLLLALDAPSSC*
Ga0126380_103835074	3300010043	Tropical Forest Soil	ATFHLTKNALALHLLFEDPESLIDIVVANEYLQNVSNLLLALHAPSSC*
Ga0126380_114285852	3300010043	Tropical Forest Soil	ASDGFCLLAGLALGRFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLSLDAPSSC*
Ga0126380_120495481	3300010043	Tropical Forest Soil	GRFFIRLTALHLTKNALALHLLLEHPESLIDIVVSNEYLQAVSNLLLAPEAPSSC*
Ga0126384_102975861	3300010046	Tropical Forest Soil	AGLALRRFFIRLAALHLTKNALTLHLLFEHPESLIDIVVSNEYLQAVSNLLLALNAPSSC
Ga0126384_112383271	3300010046	Tropical Forest Soil	LAGLALGRFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
Ga0126384_112825371	3300010046	Tropical Forest Soil	LHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSCC*
Ga0126382_101435234	3300010047	Tropical Forest Soil	LHLLFEHPESLIDIVVSNEYLQAVSNLLLALNAPSSC*
Ga0126382_104153684	3300010047	Tropical Forest Soil	RLFIRLATLHLTKNALALHLLLEHPESLIDIVVATSTCKMFSNLLPALDAPSSC*
Ga0126382_106420123	3300010047	Tropical Forest Soil	LHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC*
Ga0126382_112788401	3300010047	Tropical Forest Soil	KNALALHLLFEHPESLIDIVVANEYLQNVSNLLLALDAPSSC*
Ga0126370_104085173	3300010358	Tropical Forest Soil	AGLALGRFFIRLAALHLTKNALALHLLLKGPESLIDIVVSNEYLQNVSNLLLAPEAPSSR
Ga0126372_113781912	3300010360	Tropical Forest Soil	LAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLAPEAPSSR*
Ga0126378_100903528	3300010361	Tropical Forest Soil	ALHLLFEDPESLIDIVVANEYLQNVSNLLLALHAPSSC*
Ga0126377_134099322	3300010362	Tropical Forest Soil	HLTKNALALHLLFEDPESLIDIVVANEYLQNVSNLLLALHAPSSC*
Ga0126381_1002664611	3300010376	Tropical Forest Soil	LHLAKNALALHLLFEHPESLIDIVVSNEYLQAVSNLLLALNAPSSC*
Ga0126381_1005561236	3300010376	Tropical Forest Soil	HLTNNALALQLLLEHPESLFDIVFANDDLQNVSNLLLRLHAPSSC*
Ga0126381_1006325764	3300010376	Tropical Forest Soil	ALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPLSC*
Ga0126383_101370261	3300010398	Tropical Forest Soil	NALALHLLLEDPERLIDIVVANDDLQNVSNLLLAPDAPSSCR*
Ga0137383_112432512	3300012199	Vadose Zone Soil	IRPAALHLAKNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC*
Ga0137382_100961551	3300012200	Vadose Zone Soil	NALALHLLLEDSESLIDIVVANDDLQNVSNLLTALDAPSSC*
Ga0137377_100323901	3300012211	Vadose Zone Soil	LTKNALALHLFLDHPESLIDIVVAYKYLQNVSNLLPAPDAPASC*
Ga0137377_109215722	3300012211	Vadose Zone Soil	FPGGLARAPDRFRLLAGLALRWFFIRPAALHLAKNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC*
Ga0137369_107010891	3300012355	Vadose Zone Soil	ALALHLLLEHPESLIDIVVAYEYLQNVSNLLPAPDAPASC*
Ga0137385_101198151	3300012359	Vadose Zone Soil	ALHLTKNALALHLLLEHPESLIDIVVAYEYLQNVSNLLPTPDAPASC*
Ga0134049_11129272	3300012403	Grasslands Soil	ARAPDRFRLLAGLALRWFFIRPAALHLAKNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC*
Ga0137373_105366611	3300012532	Vadose Zone Soil	KNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC*
Ga0126375_104449904	3300012948	Tropical Forest Soil	TKNALALHLLFEDPESLIDIVVANEYLQNVSNLLLALHAPSSC*
Ga0126375_107269881	3300012948	Tropical Forest Soil	ALALHLLFEDPESLIDIVVANEYLQNVSNLLLALDAPSSC*
Ga0134110_101735721	3300012975	Grasslands Soil	LLFEDPESLIDIVVANDDLQNVSNLALRAASSSC*
Ga0134073_103363363	3300015356	Grasslands Soil	APDRFRLLAGLALRWFFIRPAALHLAKNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC*
Ga0134089_103220062	3300015358	Grasslands Soil	ELHLPEYAFALEFFLQGAQGLVDVVVANDDLQNVSNLALRAAPSSCW*
Ga0182036_101411581	3300016270	Soil	IRLAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSR
Ga0182033_113297051	3300016319	Soil	TFHLTKNALALHLLFEDPESLIDIVVANDDLQNVSNLLLAPDAPSSY
Ga0182034_120481061	3300016371	Soil	LALHLLLEDPERLIDIVVSNEYLQNVSNLLPALDAPSSC
Ga0182040_101093957	3300016387	Soil	HLLFEDSQGLFDIVVANDDLQNVSNLLPALHAPSSC
Ga0182037_101903012	3300016404	Soil	LTKNALALHLLLEDPERLIDIVVSNEYLQNVSNLLPALDAPSSC
Ga0182039_103592114	3300016422	Soil	LLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0126371_112291151	3300021560	Tropical Forest Soil	RFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0242654_104022571	3300022726	Soil	RLLAGLALGRFFIRLAALHLTKNALALQLLFEDPKSLIDIVVANDDLQNVSNLLPA
Ga0209761_12016443	3300026313	Grasslands Soil	FFIRPAALHLAKNALALQLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC
Ga0257179_10558522	3300026371	Soil	ALALHLLLEDSESLIDIVVANDDLQNVSNLLTALDAPSSC
Ga0209058_11949053	3300026536	Soil	QLLFESPESLIDIVVANEYLQNVSDLPPALDTPSSC
Ga0209590_101957614	3300027882	Vadose Zone Soil	KNALALHLLLEDSESLIDIVVANDDLQNVSNLLTALDAPSSC
Ga0307289_102971201	3300028875	Soil	NALALQLLFKNPKSLIDIVVANEYLQNFSDLLLALDARQAVDGAVAVSAF
Ga0307278_104480602	3300028878	Soil	AKDALALHLLLEHPEGLIDIVVSNDDLQNVSDLLLARFAPSSC
Ga0318516_101871561	3300031543	Soil	TKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318541_100856831	3300031545	Soil	ALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0318528_100297855	3300031561	Soil	LHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0318528_101219084	3300031561	Soil	LAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPMAVALNAL
Ga0318528_105998061	3300031561	Soil	FIRLAALHLTKNALALHLLLKGPESLIDIVVSNEYLQNVSNLLLAPEAPSSR
Ga0310915_103731841	3300031573	Soil	KNALALHLLLEDPERLIDIVVSNEYLQNVSNLLPALDAPSSC
Ga0318542_101888192	3300031668	Soil	RLAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPMAVALNAL
Ga0318574_109122272	3300031680	Soil	LHLTKNALSLHLLFEDSQGLFDIVVANDDLQNVSNLLPAQDALASC
Ga0318496_107237101	3300031713	Soil	FFIRLAALHLTKNALALHLLFEDSQGLFDIVVANDDLQNVSNLLPARDALASC
Ga0306917_101061826	3300031719	Soil	KNALSLHLLFEDSQGLFDIVVANDDLQNVSNLLPARDALASC
Ga0306917_110323061	3300031719	Soil	AALHLTKNALALHLLFEDSQGLFDIVVANDDLQNVSNLLPALHAPSSC
Ga0318493_107874591	3300031723	Soil	LAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318500_104257752	3300031724	Soil	PATFHLTKNALALHLLLEDPERLIDIVVSNEYLQNVSNLLPALDAPSSC
Ga0318554_104302391	3300031765	Soil	ASDGFCLLAGLALGRFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLSLDAPSSC
Ga0318509_100939355	3300031768	Soil	ALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0318509_108403551	3300031768	Soil	LLAGLALGRFFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLSLDAPSSC
Ga0318521_109935801	3300031770	Soil	LHLTKNALSLHLLFEDSQGLFDIVVANDDLQNVSNLLPARDALASC
Ga0318546_102329624	3300031771	Soil	NALALHLLFEDSQGLFDIVVANDDLQNVSNLLPAPDALASC
Ga0318547_103225273	3300031781	Soil	LTKNALALHLLLENPERLIDIVVANDDLQNISNLLLAPDAPSSC
Ga0318548_104890832	3300031793	Soil	HLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPMAVALNAL
Ga0318503_102622942	3300031794	Soil	LLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318523_102109711	3300031798	Soil	FFIRLAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0310917_111257881	3300031833	Soil	LAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLLSLDAPSSC
Ga0318517_101078641	3300031835	Soil	AALHLTKNALSLHLLFEDSQGLFDIVVANDDLQNVSNLLPAQDALASC
Ga0318544_101222794	3300031880	Soil	RLAALHLTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318551_103868631	3300031896	Soil	FFVRLAALHLTKNALSLHLLFEDSQGLFDIVVANDDLQNVSNLLPAQDALASC
Ga0306923_112162511	3300031910	Soil	LLFEDSQGLFDIVVANDDLQNVSNLLPAPDALASC
Ga0310912_102176341	3300031941	Soil	LHLLFEHPESLIDIVVSNEYLQNVSNLLLLSLDAPSSC
Ga0310912_102706082	3300031941	Soil	LHLLLKGPESLIDIVVSNEYLQNVSNLLLALDAPSSC
Ga0310912_108313981	3300031941	Soil	LTKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPMAVALNAL
Ga0310916_117187521	3300031942	Soil	NALALHLLFEDPESLIDIVVANDDLQNVSNLLLAPDAPSSY
Ga0306922_114222651	3300032001	Soil	GLALGRFFIRLAALHLAKNALALHLLLKGPESLIDIVVSNEYLQNVSNLLLAPEAPSSR
Ga0318507_105011031	3300032025	Soil	LHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0318549_101640814	3300032041	Soil	KNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318556_100668864	3300032043	Soil	RLAALHLTKNALALHLLLENPERLIDIVVANDDLQNVSNLLLAPDAPSSC
Ga0318532_101998731	3300032051	Soil	TKNALALHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPMAVALNAL
Ga0318504_101537592	3300032063	Soil	LHLLLEGPESLIDIVVANEYLQNVSNLLPAPDAPSSC
Ga0318513_102926913	3300032065	Soil	ALHLLLENPERLIDIVVANDDLQNISNLLLAPDAPSSC
Ga0306920_1009934251	3300032261	Soil	FIRPAAFHLTKNALALHLLFEDPESLIDIVVANDDLQNVSNLLLAPDAPSSY
Ga0306920_1035912451	3300032261	Soil	LAALHLAKNALALHLLFEHPESLIDIVVSNEYLQNVSNLLLLALDAPSSC
Ga0310914_108612661	3300033289	Soil	RFFIRPAAFHLTKNALALHLLFEDPESLIDIVVANDDLQNVSNLLLAPDAPSSY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088182

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences