Metagenome / Metatranscriptome Family F088284

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088284
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	78 residues
Representative Sequence	MLATAICLERYMKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDE
Number of Associated Samples	32
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	21.10 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	31
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (86.239 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (56.881 % of family members)
Environment Ontology (ENVO)	Unclassified (59.633 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (58.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07727	RVT_2	1.83
PF00005	ABC_tran	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
All Organisms	root	All Organisms	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
cellular organisms	root	All Organisms → cellular organisms	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	12.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	12.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	12.84 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	11.93 %
Skeletonemataceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	11.93 %
Skeletonema	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	11.93 %
Skeletonema marinoi-dohrnii complex	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.24 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	11.93 %
Skeletonema marinoi	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090009\|LWAnN_F624WLL02JMBT5	Not Available	534	Open in IMG/M
3300000883\|EsDRAFT_10088531	Not Available	593	Open in IMG/M
3300000883\|EsDRAFT_10182143	Not Available	641	Open in IMG/M
3300005525\|Ga0068877_10427246	Not Available	743	Open in IMG/M
3300007561\|Ga0102914_1202664	Not Available	610	Open in IMG/M
3300007649\|Ga0102912_1074866	Not Available	978	Open in IMG/M
3300007649\|Ga0102912_1095737	Not Available	856	Open in IMG/M
3300007649\|Ga0102912_1192856	Not Available	584	Open in IMG/M
3300007649\|Ga0102912_1218711	Not Available	546	Open in IMG/M
3300007861\|Ga0105736_1092662	Not Available	648	Open in IMG/M
3300007953\|Ga0105738_1002610	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1940	Open in IMG/M
3300007953\|Ga0105738_1029408	Not Available	822	Open in IMG/M
3300007955\|Ga0105740_1052886	Not Available	646	Open in IMG/M
3300007955\|Ga0105740_1089457	Not Available	533	Open in IMG/M
3300008263\|Ga0114349_1008847	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	6557	Open in IMG/M
3300008263\|Ga0114349_1036140	Not Available	2451	Open in IMG/M
3300008263\|Ga0114349_1106084	Not Available	1214	Open in IMG/M
3300008263\|Ga0114349_1125424	Not Available	1070	Open in IMG/M
3300008263\|Ga0114349_1166662	Not Available	850	Open in IMG/M
3300008265\|Ga0114361_1000704	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	9631	Open in IMG/M
3300008265\|Ga0114361_1006567	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Skeletonemataceae → Skeletonema → Skeletonema marinoi-dohrnii complex → Skeletonema marinoi	6554	Open in IMG/M
3300008265\|Ga0114361_1031027	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2131	Open in IMG/M
3300008265\|Ga0114361_1032559	Not Available	1753	Open in IMG/M
3300008265\|Ga0114361_1034401	Not Available	1689	Open in IMG/M
3300008265\|Ga0114361_1034434	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	3360	Open in IMG/M
3300008265\|Ga0114361_1050938	Not Available	1314	Open in IMG/M
3300008265\|Ga0114361_1144865	Not Available	741	Open in IMG/M
3300008265\|Ga0114361_1194566	Not Available	632	Open in IMG/M
3300008265\|Ga0114361_1205031	Not Available	614	Open in IMG/M
3300008265\|Ga0114361_1276566	Not Available	512	Open in IMG/M
3300009080\|Ga0102815_10308255	Not Available	876	Open in IMG/M
3300009080\|Ga0102815_10650438	Not Available	594	Open in IMG/M
3300010885\|Ga0133913_12648766	Not Available	1215	Open in IMG/M
3300010965\|Ga0138308_114702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4355	Open in IMG/M
3300020048\|Ga0207193_1205199	Not Available	1551	Open in IMG/M
3300020220\|Ga0194119_10138194	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1830	Open in IMG/M
3300020565\|Ga0208718_1096895	Not Available	515	Open in IMG/M
3300021325\|Ga0210301_1325422	Not Available	558	Open in IMG/M
3300021325\|Ga0210301_1378994	Not Available	503	Open in IMG/M
3300021328\|Ga0210298_1054799	Not Available	1149	Open in IMG/M
3300021328\|Ga0210298_1088943	Not Available	741	Open in IMG/M
3300021328\|Ga0210298_1117134	Not Available	1378	Open in IMG/M
3300021328\|Ga0210298_1170469	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1621	Open in IMG/M
3300021328\|Ga0210298_1293380	Not Available	846	Open in IMG/M
3300024343\|Ga0244777_10729258	Not Available	591	Open in IMG/M
3300027757\|Ga0208671_10302078	Not Available	564	Open in IMG/M
3300027885\|Ga0209450_10826895	Not Available	667	Open in IMG/M
3300033984\|Ga0334989_0000661	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	16257	Open in IMG/M
3300033984\|Ga0334989_0002894	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	8391	Open in IMG/M
3300033984\|Ga0334989_0014425	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	4126	Open in IMG/M
3300033984\|Ga0334989_0030224	Not Available	2917	Open in IMG/M
3300033984\|Ga0334989_0048774	Not Available	2320	Open in IMG/M
3300033984\|Ga0334989_0061731	Not Available	2066	Open in IMG/M
3300033984\|Ga0334989_0064010	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2028	Open in IMG/M
3300033984\|Ga0334989_0067857	Not Available	1969	Open in IMG/M
3300033984\|Ga0334989_0143269	Not Available	1327	Open in IMG/M
3300033984\|Ga0334989_0158871	Not Available	1253	Open in IMG/M
3300033984\|Ga0334989_0185729	Not Available	1146	Open in IMG/M
3300033984\|Ga0334989_0221043	Not Available	1034	Open in IMG/M
3300033984\|Ga0334989_0227632	Not Available	1016	Open in IMG/M
3300033984\|Ga0334989_0295524	Not Available	863	Open in IMG/M
3300033984\|Ga0334989_0387343	Not Available	722	Open in IMG/M
3300033984\|Ga0334989_0490870	Not Available	612	Open in IMG/M
3300033984\|Ga0334989_0547179	Not Available	565	Open in IMG/M
3300034022\|Ga0335005_0341197	Not Available	877	Open in IMG/M
3300034022\|Ga0335005_0590157	Not Available	603	Open in IMG/M
3300034050\|Ga0335023_0311512	Not Available	851	Open in IMG/M
3300034060\|Ga0334983_0271721	Not Available	1024	Open in IMG/M
3300034064\|Ga0335001_0108976	Not Available	1582	Open in IMG/M
3300034064\|Ga0335001_0110522	Not Available	1570	Open in IMG/M
3300034064\|Ga0335001_0120048	Not Available	1498	Open in IMG/M
3300034064\|Ga0335001_0123051	Not Available	1477	Open in IMG/M
3300034064\|Ga0335001_0123882	Not Available	1471	Open in IMG/M
3300034064\|Ga0335001_0129992	Not Available	1431	Open in IMG/M
3300034064\|Ga0335001_0131415	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1423	Open in IMG/M
3300034064\|Ga0335001_0190709	Not Available	1148	Open in IMG/M
3300034064\|Ga0335001_0192692	Not Available	1141	Open in IMG/M
3300034064\|Ga0335001_0240943	Not Available	1000	Open in IMG/M
3300034064\|Ga0335001_0280486	Not Available	913	Open in IMG/M
3300034064\|Ga0335001_0282527	Not Available	909	Open in IMG/M
3300034064\|Ga0335001_0292081	Not Available	892	Open in IMG/M
3300034064\|Ga0335001_0337000	Not Available	818	Open in IMG/M
3300034064\|Ga0335001_0355787	Not Available	792	Open in IMG/M
3300034064\|Ga0335001_0375364	Not Available	767	Open in IMG/M
3300034064\|Ga0335001_0395560	Not Available	743	Open in IMG/M
3300034064\|Ga0335001_0431217	Not Available	705	Open in IMG/M
3300034064\|Ga0335001_0448609	Not Available	688	Open in IMG/M
3300034064\|Ga0335001_0519374	Not Available	631	Open in IMG/M
3300034064\|Ga0335001_0524796	Not Available	627	Open in IMG/M
3300034064\|Ga0335001_0560178	Not Available	603	Open in IMG/M
3300034064\|Ga0335001_0673344	Not Available	540	Open in IMG/M
3300034064\|Ga0335001_0710328	Not Available	523	Open in IMG/M
3300034096\|Ga0335025_0232964	Not Available	1019	Open in IMG/M
3300034096\|Ga0335025_0368811	Not Available	750	Open in IMG/M
3300034096\|Ga0335025_0658547	Not Available	511	Open in IMG/M
3300034105\|Ga0335035_0433205	Not Available	737	Open in IMG/M
3300034121\|Ga0335058_0148846	Not Available	1371	Open in IMG/M
3300034167\|Ga0335017_0062735	Not Available	2193	Open in IMG/M
3300034167\|Ga0335017_0116646	Not Available	1567	Open in IMG/M
3300034167\|Ga0335017_0155156	Not Available	1332	Open in IMG/M
3300034167\|Ga0335017_0246808	Not Available	1010	Open in IMG/M
3300034167\|Ga0335017_0262335	Not Available	973	Open in IMG/M
3300034167\|Ga0335017_0707860	Not Available	511	Open in IMG/M
3300034168\|Ga0335061_0043423	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2406	Open in IMG/M
3300034168\|Ga0335061_0178575	Not Available	1126	Open in IMG/M
3300034168\|Ga0335061_0248037	Not Available	937	Open in IMG/M
3300034168\|Ga0335061_0557229	Not Available	579	Open in IMG/M
3300034168\|Ga0335061_0648967	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	78.90%
Marine	Environmental → Aquatic → Marine	21.10%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	75.23%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.51%
Coastal	Environmental → Aquatic → Marine → Coastal	4.59%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	74.31%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	16.51%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.59%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.83%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	56.88%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	14.68%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.68%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	4.59%
Freshwater And Marine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Freshwater And Marine	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.92%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
3300000883	Estuary microbial communities from the Columbia River - 5 PSU	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300010965	Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020565	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021325	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1033 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021328	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_00587390	2088090009	Freshwater Sediment	MLATAICLERYMKNDLSPALRDLIKKEWLDRWKERLGNPSKNPRQVLCAYVEELDITVAGLDNQMEWDYWDDDDTDEPH
EsDRAFT_100885312	3300000883	Freshwater And Marine	HCDMLATAICLERYMKHDMSATIRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDAMEWEYWDNDDIEDSNAVE*
EsDRAFT_101821432	3300000883	Freshwater And Marine	VAKHCDMLATAICLERYMKADLSPQLWDSIENEWLDRWNERLGNPSQTPRQVLRASVEDLDITVAGIDEQMEWDTWDEGIDVVPSE*
Ga0068877_104272461	3300005525	Freshwater Lake	MLATAICLERYMKHDLSSGLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDLWDTSDPDDESQDE*
Ga0102914_12026642	3300007561	Estuarine	MKHDMSATIRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDAMEWEYWDDDDFEDSNAVE*
Ga0102912_10748662	3300007649	Estuarine	MLATAICLERYMKHDMSARIRDSIEKEWLECWKERLGNPTQTPRQILRSYVEDLDITVAGLDDVMEWDCWDNPDPDDGDGGQDE*
Ga0102912_10957372	3300007649	Estuarine	MKHDMSASIRDAIEKEWLACWKERLGNPTQTPRQVLRTYVEELDITVAGLDDAMEWDFWDDGPNDEDTADE*
Ga0102912_11928561	3300007649	Estuarine	MLATAICLERYMKNDMSATIRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDAMEWEYWDNSDIEGDNADE*
Ga0102912_12187112	3300007649	Estuarine	MKRDMSDAIRDSIEREWLERWKERLGNPSQTPRQILRTYVEQLDITVAGLDDVMEWEFWDHSDPDDSSQDE*
Ga0105736_10926622	3300007861	Estuary Water	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSDGSDE*
Ga0105738_10026102	3300007953	Estuary Water	MKNDMSATIRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDAMEWEYWDDSDFEDGTADE*
Ga0105738_10294081	3300007953	Estuary Water	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPRQVLRPYVEELDITVAGLDEAMEWDCWVDDTPSDDSDGSDE*
Ga0105740_10528862	3300007955	Estuary Water	MLATAICLERYMKHDLSSGLRDSIEKEWLDRWKERLGNPTQTPRQILHAYVEELDITVAGLDDVMEWDYWDTPDPDNGDGSQDK*
Ga0105740_10894572	3300007955	Estuary Water	MKNDMSDTIRDSIEKEWLDRWKERLGNPTQTPRQVLRTYVQELDITVAGLDDAMEWEFWDDDGSDDDTHNE*
Ga0114349_10088473	3300008263	Freshwater, Plankton	MKHDMSTTLRDSIEKEWLDRWKERLGNPSQTPRQVLRAYVEELDITVAGLDSAMEWEYWDDDVVDDDSQDE*
Ga0114349_10361404	3300008263	Freshwater, Plankton	MLATAICLKRYMKRDMSDLVRDAIEKDWLARWKVRLDNPDRTPRQVLRAYVEELDITVVGLDEAMEWDCWMDDTPSIDSDDSDE*
Ga0114349_11060842	3300008263	Freshwater, Plankton	MLATAICLERYMKRDMSDSVRDAIEKDWLARWKERLDNPDRTPCQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSIDSDDSNE*
Ga0114349_11254241	3300008263	Freshwater, Plankton	MLATAICLERYMKQDMSATLRDSIEKEWLDRWKDRLGNHTQTPREILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDE*
Ga0114349_11666621	3300008263	Freshwater, Plankton	MLATAICLERYMKQDMSATLQDSIEKKWLDRWKERLGNPTQTPRQILRGYVEELDITVAGLDDVMEWDYWDSSDPDDASQDE*
Ga0114361_10007048	3300008265	Freshwater, Plankton	MKHDMSATIRDLIEKEWLDRWKEHLGNPSQTPCQVLQAYVEELDITVAGLDDAMEWDYWDNDVIDDDSQDE*
Ga0114361_10065673	3300008265	Freshwater, Plankton	MLAIAICLERYMKHDMSTTIWDSIEKEWLDRWKERLGNPSQTPRQVLRAYVEELDITVAGLDDAMEWDYWDNDVVDDDSQDE*
Ga0114361_10310272	3300008265	Freshwater, Plankton	MLATAICLERYMKRDMSDSVRDAIEKDWLARWKVRLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWECWMDETPSDDSDDSDE*
Ga0114361_10325592	3300008265	Freshwater, Plankton	MKQDMWAPLRDSIEKEWLDRWKERLGNPSRTPGQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASPDE*
Ga0114361_10344012	3300008265	Freshwater, Plankton	MKQDMSATLQDSIEKKWLDRWKERLGNPTQTPRQILRGYVEELDITVAGLDDVMEWDYWDNSDPDDASQDK*
Ga0114361_10344342	3300008265	Freshwater, Plankton	MKRDMSATLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVTGLDDVMEWDCWSNSDPDDASQDE*
Ga0114361_10509383	3300008265	Freshwater, Plankton	MLATAICLERYMKRDMSDSVRDAIEMDWLARWKDRLDNPDCTLRQVLRAYVEELDITVAGLNEAMEWECWVDDTPSIDSDASDE*
Ga0114361_11448651	3300008265	Freshwater, Plankton	MLATAICLECYMKRDMSDSVRDAIVKDWLARWKVRPDNPDRTPRQVLRAYVEELDINVAGLDEAMEWDCWVDDTPSIDSDDSDE*
Ga0114361_11945661	3300008265	Freshwater, Plankton	MLATAICLERYMKQDMSATLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDNASQDE*
Ga0114361_12050311	3300008265	Freshwater, Plankton	MKHDMSTTLRDSIEKEWLDRWKERLGNPSQTPRQVLRAYVEELDITVAGLDGAMEWDYWDDDAIDDDSQEE*
Ga0114361_12765661	3300008265	Freshwater, Plankton	MLATAICLERYMKHDMSDSVRDAIEKDWLARWKDRLDNPDRTPRQVLCAYVEELDITVAGLDEAME
Ga0102815_103082551	3300009080	Estuarine	KHCDMLATAICLERYMKHDLSAPVRDSIERDWLDRWKSRLGNPDRTPRQVMRAYVEDLDITVATLDEAMEWDCWDNTDEGDDNDSPGDASV*
Ga0102815_106504381	3300009080	Estuarine	MLATAICLERYMKNDMSDTLRDSIEKEWLDRWKERLGNPTQTPPQVLRTYVQELDNTVAGLYDAMEWEFWDDDGCDNDTHDE*
Ga0133913_126487662	3300010885	Freshwater Lake	MLATAICLERYMKVDLSPQLRDLIKKEWLDRWKERLGNPSQTPRQILRAYVEELDITVAGLDNQMDWDTWDEDIDVVPSE*
Ga0138308_1147022	3300010965	Lake Chemocline	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWECWADDTPSDASDSSDE*
Ga0207193_12051992	3300020048	Freshwater Lake Sediment	MLATAICLERYMKQDMSAAIRDSIEKEWLDRWKERLGNPTQTPRQVLRTYVEELDITVAGLDDAMEWENWDNSDPDDNSQDE
Ga0194119_101381942	3300020220	Freshwater Lake	CLERYMQHDMSAAIRDSIEKEWLDQWKERLGNPTQTPRQILRAYVEELDITVAGLDDAMEWEYWDNSDTEDGPADE
Ga0208718_10968951	3300020565	Freshwater	VAKHCDMLATAICLERYMKRDMSDSVRDAIEKDWLARWKARLDNPDRTPRQVLCAYVEELDITVAGLDEAMDWECWADDTPSDASDSSDD
Ga0210301_13254222	3300021325	Estuarine	SATLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVTGLDDVMEWDYWSNSDPDDASQDE
Ga0210301_13789942	3300021325	Estuarine	VAKHCDMLATAICLERYMKHDLSASVRDSIERDWLDRWKSRLGNPDSTPRQVMRAYVEDLDIMVATLDYAMEWDCWDAADDDYDGLPSDASA
Ga0210298_10547992	3300021328	Estuarine	LEWYMKHEMSATIRDSIEKEWLDRWKEQLGNPSQTPRQVLRAYVEELDITVAGLDDAMEWDYWDNEDSDDPGQDE
Ga0210298_10889432	3300021328	Estuarine	MLATAISICLERYMKNDLSASVRDAIEKEWLAKWKECLGNPDGTPRQVMRAYVEDLNITVASLDNKMEWDCWDDDAPTSYDSDDSCVND
Ga0210298_11171342	3300021328	Estuarine	MKHDLSPGLRDSIEKEWLDKWKERLGNPQQTPRQILRTYVEELDITVAGLDNQMEWEYWDDDDINAPQLE
Ga0210298_11704693	3300021328	Estuarine	GHVAKHCDMLATAICLERYMKRDMSATLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVTGLDDVMEWDCWSNSDPDDASQDE
Ga0210298_12933801	3300021328	Estuarine	AKHCDMLATAICLERYMKHDLSSGLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDLWDTSDPDDESQDE
Ga0244777_107292581	3300024343	Estuarine	MKRDMSDAIRDSIEREWLERWKERLGNPSQTPRQILRTYVEQLDITVAGLDDVMEWEFWDHSDPDDSSQDE
Ga0208671_103020781	3300027757	Estuarine	KHCDMLATAICLERYMKHDLSAPVRDSIERDWLDRWKSRLGNPDRTPRQVMRAYVEDLDITVATLDEAMEWDCWDNTDEGDDNDSPGDASV
Ga0209450_108268952	3300027885	Freshwater Lake Sediment	MLATAICLERYMKHDMSPGIRDAIEKEWLDRWRERLGNTTHTPRQVLRAYVEELDITVAGLDDAMEWDTWEAEDVDILPDE
Ga0334989_0000661_5336_5551	3300033984	Freshwater	MKHDMPNAIRDSIEKEWLTRWKERLGNPTHTPPQVLRAYVEDLDITVAGLDDAMEWETWDTDDIDAEGQDE
Ga0334989_0002894_2835_3083	3300033984	Freshwater	MLATAICLEGYMKHDMSTTIRDSIEKEWLDCWKERLGNPSQTPHQALRAYVEELDITFAGLDGAMEWDYWDNDVVDNDSQDE
Ga0334989_0014425_1271_1495	3300033984	Freshwater	LPRTVHEAGAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDE
Ga0334989_0030224_2531_2785	3300033984	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLARWKDRLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSDSSDE
Ga0334989_0048774_932_1186	3300033984	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRMPRQVLRAYIEELDITVAGLDEAMEWDCWADDTPSDDSDGSDE
Ga0334989_0061731_886_1140	3300033984	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLACWKERLDNPDRTPRQVLRAYVEDLDIPVAGLDEAMEWDCWADDTPSNDSDSSDE
Ga0334989_0064010_1547_1792	3300033984	Freshwater	MLATAICLKRYMKRDMSDSVRDAIEKDWLARWKDRLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWVDNTPSDDSDE
Ga0334989_0067857_123_371	3300033984	Freshwater	MLATAICLERYMKQDISAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVKELDITVAGLDDVMEWDYWDNSDPDNASQDK
Ga0334989_0143269_2_256	3300033984	Freshwater	MAKHCDMLATAICLERYMKRDMSDSVRDTIEKDWLARWKDRLDNPDRMPRQVLCAYVEELDITVAGLDEAMEWECWVDDTPSDDS
Ga0334989_0158871_811_1056	3300033984	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLASWKERLDNPDRMPRQVLRAYVEELDITVAGLDEAMEWDCWTDDTPSNDSDE
Ga0334989_0185729_148_402	3300033984	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPCQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSNGSDE
Ga0334989_0221043_789_1004	3300033984	Freshwater	MKQDISAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVKELDITVAGLDDVMEWDYWDNSDPNNASQDK
Ga0334989_0227632_687_890	3300033984	Freshwater	MSTTLRDSIEKEWLDRWKERLGNPSQTPRQVLRAYVEELDITVAGLDSAMEWDYWDDDVVDDDSQDE
Ga0334989_0295524_6_221	3300033984	Freshwater	MKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMESDYWDNSDPDDASQDE
Ga0334989_0387343_254_502	3300033984	Freshwater	MLATAICLERYMKQDMSAALRDSIEKEWLDRWKERLGNPTQTPRQILQAYVEELDITVAGLDDVMEWDYWYNSDPNDASQDE
Ga0334989_0490870_350_598	3300033984	Freshwater	MLATAICLEGYMKQDMLAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEDLDITVAGLDDVMEWDYWYNSDPNKASQDE
Ga0334989_0547179_135_383	3300033984	Freshwater	MLATAICLERYMKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWYNSDPDDASQDK
Ga0335005_0341197_114_362	3300034022	Freshwater	MLATAICLERYMKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMESDYWDNSDPDDASQDE
Ga0335005_0590157_107_361	3300034022	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSDGSDE
Ga0335023_0311512_607_828	3300034050	Freshwater	MKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSDGSDE
Ga0334983_0271721_336_590	3300034060	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKACLDNPDRTPPQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDSDGSDE
Ga0335001_0108976_700_945	3300034064	Freshwater	MLATAICLERYMKNDLSSALRDSIEKEWLARWKERLGNPQQTPRQVLRAYVEELDITVAGLDNQMEWEYWEEDDPDGPQLN
Ga0335001_0110522_1001_1246	3300034064	Freshwater	MLATAICLERYMKHDMSPAIRDSIEKEWLDRWKERLGNPTHTPRQVLRAYVEELDITVAGLDDQMEWETWEDDDIDALQVK
Ga0335001_0120048_1073_1285	3300034064	Freshwater	MKHDMSPAIRDSIEKEWLDRWRERLGNPTATPRQVMRAYVEELDITVAGLDEQMEWDAWADEDADISAVE
Ga0335001_0123051_1224_1469	3300034064	Freshwater	MMATAICLERYMKTDLSPALRDSIEQEWLDRWKEHLGNPTQTPRQVLRAYVEELDITVAGLDDEMEWETWEDNDIDAPAVE
Ga0335001_0123882_568_780	3300034064	Freshwater	MKHDMSPGIRDAIEKEWLDRWRERLGNPTHTPRQVLRAYVEELDITVAGLDDAMEWDTWEAEDVDILPDE
Ga0335001_0129992_181_426	3300034064	Freshwater	MLATAICLERYMKADLSPALRDSIEQEWLERWKEKLGNPTLTPRQVLRAYVEDLDITVAGLDEEMEWDAWVDGDYDAPADE
Ga0335001_0131415_1182_1394	3300034064	Freshwater	MKNDLSPALRDSIEKEWLDRWKERLGNPTQTPRQVLRAYVEELDITVAGLDNEMEWSYWDEDDDDSPQLA
Ga0335001_0190709_530_775	3300034064	Freshwater	MLATAICLERYMKTDLSPALRDSIEQEWLARWKERLGNPTQTPRQVLRAYVEELDITVAGLDDKMEWETWDDDDIDNPAVE
Ga0335001_0192692_500_712	3300034064	Freshwater	MKHDMSPAIRDSIEKEWLDRWQERLGHPTNTPCQVLRVYVEELDITVAGLDDQMEWDTWEDDDAEAPQVE
Ga0335001_0240943_66_293	3300034064	Freshwater	MKHDLSAPVRDAIEKDWLDRWKARLGDPDRTPRQIMRTYVEDLDITVARLDNEMEWDCWDDDAPTGYESDASEGL
Ga0335001_0280486_271_483	3300034064	Freshwater	MKADLSPALRDSIEQEWLERWKERLGNPTLTPRQVLRAYVEDLDITVAGLDEEMEWDAWVDGDYDAHADE
Ga0335001_0282527_1_234	3300034064	Freshwater	MLATAICLERYMKTDMSPAIRDSIEKEWLDRWRERLGNPSATPRQVMRAYVEELDITVAGLDEQMDWDTWADDDADIS
Ga0335001_0292081_154_399	3300034064	Freshwater	MLATAICLERYMKHNMLPSIRDSIEKEWLDRWRERLGNPTQTPRQVLRAYVEELDITVAGLDEQVEWGTWEDDTVDALPIE
Ga0335001_0337000_349_564	3300034064	Freshwater	MKQDMSAAIRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDGSQDE
Ga0335001_0355787_501_746	3300034064	Freshwater	MLATAICLKRYMKHDLSPALRDSIEKEWLDRWKEQLGNPTQTPRQVLHAYVEELDITVAGLDNQMEWDYWEEDDVDGPQLD
Ga0335001_0375364_435_680	3300034064	Freshwater	MLATAICLERYMKHNMSPTLCDSIEKEWLDRWKERLGNPTQTPRQVLRAYVEELDITVAGLDNQMEWDYWDEDDVDNPQLE
Ga0335001_0395560_100_348	3300034064	Freshwater	MLATAICLERYMKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDK
Ga0335001_0431217_1_276	3300034064	Freshwater	MLATAICLERYMKHNLSPALRDSIEKEWLNRWKERLGNPTKTPRQVLRAYVEELDITVAGLDNQMEWDYWEEDNVDGPQDTVQMNRCVSSSH
Ga0335001_0448609_1_210	3300034064	Freshwater	KADLSPALRDSIEQEWLERWKERLGNPTHTPRQVLRAYVEELDITVAGLDDEMEWETWEDDVLDTPTDE
Ga0335001_0519374_237_449	3300034064	Freshwater	MKNDMSPAIRDSIEKEWLDRWRDRLGNPSATPRQIMRAYVEELDITVAGLDDQMDWDTWADDDADVSAVE
Ga0335001_0524796_399_611	3300034064	Freshwater	MKNNLSPALWDSIEKEWLDRWKERLGNPSQTPRQVLRAYVEELDITVAGLDNQMEWDYWDDDDTDKPHLA
Ga0335001_0560178_236_448	3300034064	Freshwater	MKNVLSPLVRDTIEAEWLARWQDKLGNPTTTPRQVLRAYVKELDITVANLDEAMEWSYWDDKDDEDNSPN
Ga0335001_0673344_173_418	3300034064	Freshwater	MLATAICLERYMKNDLSPAIQDSIEQEWLDRWKERLGHPTQTPHQVLRAYVEELDITVAGLDDKMEWENWEDDDVDAPMVE
Ga0335001_0710328_306_521	3300034064	Freshwater	MKQDILAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWYNSDPDDASQDK
Ga0335025_0232964_668_922	3300034096	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLARWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMDWECWADDTPSDASDSSDD
Ga0335025_0368811_30_275	3300034096	Freshwater	MLATAICLEQYMKCDMSPAIRDSIEKEWLDRWRDRLGNPSATPRQVLRAYVEELDITVAGLDDQMDWDAWAHDDADVPAVE
Ga0335025_0658547_2_232	3300034096	Freshwater	MLATAICLERYMKHDMSPTIRDSIEKEWLDRWRERLGNPAQTPRQVLRAYVEELDITVAGLDNAMEWDTWDDPLDDK
Ga0335035_0433205_496_717	3300034105	Freshwater	MKRDMSDSVRDAIEKDWLARWKARLDNPDRTPRQVLRAYVEELDITVAGLDEAMDWECWADDTPSDGSDSSDD
Ga0335058_0148846_563_805	3300034121	Freshwater	MLATAICLERYMKVDLSPQLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDQMEWNTWDEDVDVIPSE
Ga0335017_0062735_676_924	3300034167	Freshwater	MLATAICLERYMKQDMSATLRDFIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDK
Ga0335017_0116646_1185_1394	3300034167	Freshwater	MSDSVRDAIEKDWLARWKERLDNPDHTPHQVLHTYIEELDITVAGLDEAMEWDCWVDDTPSNNSDSSDE
Ga0335017_0155156_2_217	3300034167	Freshwater	MKHCDMLATAICLERYMKQDISAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVKELDITVAGLDDVME
Ga0335017_0246808_172_435	3300034167	Freshwater	MLATAICLKRYMKQDMSATLQDSIEKEWLDRWKERLGNPTQTPRQILRAYVKELDITVAGLDDVMEWDYWDNSNPEDQSGQMTRIRS
Ga0335017_0262335_630_833	3300034167	Freshwater	MKRDMSDSVRDAIEKDWLARWKERLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWADDTPSEA
Ga0335017_0707860_275_511	3300034167	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLTRWKARLDNPDRTPCQVLRAYVEELDITVAGLDEAMEWDCWVDDTPSDDS
Ga0335061_0043423_372_587	3300034168	Freshwater	MKQDMSATLRDFIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDK
Ga0335061_0178575_879_1124	3300034168	Freshwater	MAKHCDMLATAICLERYMKRDMSDSVRDAIEKDWLARWKERLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWDCWADDTPS
Ga0335061_0248037_206_454	3300034168	Freshwater	MLATAICLERYMKQDMSAPLRDSIEKEWLDRWKERLGNPTQTPRQILRAYVEELDITVAGLDDVMEWDYWDNSDPDDASQDE
Ga0335061_0557229_80_328	3300034168	Freshwater	MLATAICLERYMKQDISAPLRDSIEKEWLDRWKERHGNPTQTPCQILRAYVEELDITVAGLDDVMEWDYWYSSDPDDASQDE
Ga0335061_0648967_322_525	3300034168	Freshwater	MLATAICLERYMKRDMSDSVRDAIEKDWLARWKDRLDNPDRTPRQVLRAYVEELDITVAGLDEAMEWD
Ga0335064_0570755_497_712	3300034357	Freshwater	MLATAICLERYMKKDLSASTRDSIEKDWLERWTARLGNPDRTPRQIMRTYVEDLDITVASLDDEMEWDFWAN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088284

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences