NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088349

Metagenome / Metatranscriptome Family F088349

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088349
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 41 residues
Representative Sequence SVLAIHDVVGGTAPARVRQGIAAARKKIEFLREEVHAHA
Number of Associated Samples 96
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.92 %
% of genes near scaffold ends (potentially truncated) 99.08 %
% of genes from short scaffolds (< 2000 bps) 83.49 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.083 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(10.092 % of family members)
Environment Ontology (ENVO) Unclassified
(25.688 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.211 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.82%    β-sheet: 0.00%    Coil/Unstructured: 64.18%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF00583Acetyltransf_1 73.39
PF13508Acetyltransf_7 6.42
PF01960ArgJ 5.50
PF07690MFS_1 4.59
PF08544GHMP_kinases_C 3.67
PF13620CarboxypepD_reg 0.92
PF13561adh_short_C2 0.92
PF01081Aldolase 0.92
PF02321OEP 0.92
PF00266Aminotran_5 0.92
PF06537DHOR 0.92
PF13185GAF_2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG1364Glutamate N-acetyltransferase (ornithine transacetylase)Amino acid transport and metabolism [E] 5.50
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.83
COG08002-keto-3-deoxy-6-phosphogluconate aldolaseCarbohydrate transport and metabolism [G] 0.92
COG3488Uncharacterized conserved protein with two CxxC motifs, DUF1111 familyGeneral function prediction only [R] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.08 %
UnclassifiedrootN/A0.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps__Contig_187736All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57597Open in IMG/M
3300001084|JGI12648J13191_1006183All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1218Open in IMG/M
3300001546|JGI12659J15293_10138100All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300001593|JGI12635J15846_10295339All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1016Open in IMG/M
3300001593|JGI12635J15846_10422056All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales801Open in IMG/M
3300002245|JGIcombinedJ26739_100589714All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300005467|Ga0070706_100104212All Organisms → cellular organisms → Bacteria2638Open in IMG/M
3300005542|Ga0070732_10451063All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005591|Ga0070761_10149883All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1366Open in IMG/M
3300005591|Ga0070761_10217921All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1135Open in IMG/M
3300005602|Ga0070762_10010790All Organisms → cellular organisms → Bacteria4579Open in IMG/M
3300005834|Ga0068851_10171741All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1197Open in IMG/M
3300005921|Ga0070766_10018907All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3646Open in IMG/M
3300005921|Ga0070766_10037742All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2665Open in IMG/M
3300005921|Ga0070766_11250406All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006032|Ga0066696_10101814All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1727Open in IMG/M
3300006052|Ga0075029_100119774All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1597Open in IMG/M
3300006052|Ga0075029_101020568All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300007076|Ga0075435_101817014All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300007982|Ga0102924_1117126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1302Open in IMG/M
3300009520|Ga0116214_1415144All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009522|Ga0116218_1232457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae829Open in IMG/M
3300010333|Ga0134080_10038494All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1847Open in IMG/M
3300010359|Ga0126376_12706169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57545Open in IMG/M
3300010364|Ga0134066_10197496All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300010364|Ga0134066_10362659All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300010376|Ga0126381_100019731All Organisms → cellular organisms → Bacteria7866Open in IMG/M
3300011270|Ga0137391_10463043All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300012096|Ga0137389_10249876All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1490Open in IMG/M
3300012205|Ga0137362_10006205All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8328Open in IMG/M
3300012210|Ga0137378_10653603All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae962Open in IMG/M
3300012361|Ga0137360_10186686All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1670Open in IMG/M
3300012917|Ga0137395_10047922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2671Open in IMG/M
3300012917|Ga0137395_10319158All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales1103Open in IMG/M
3300012917|Ga0137395_10753618All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300012923|Ga0137359_10152318All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2061Open in IMG/M
3300012988|Ga0164306_11219779All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales632Open in IMG/M
3300014169|Ga0181531_10653529All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300014200|Ga0181526_10751986All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300014489|Ga0182018_10146777All Organisms → cellular organisms → Bacteria1350Open in IMG/M
3300014489|Ga0182018_10498897All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300014501|Ga0182024_10402810All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1769Open in IMG/M
3300014501|Ga0182024_10742145All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1205Open in IMG/M
3300016371|Ga0182034_11417455All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300017654|Ga0134069_1371478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57515Open in IMG/M
3300017936|Ga0187821_10177621All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae812Open in IMG/M
3300017955|Ga0187817_10898546All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57566Open in IMG/M
3300018021|Ga0187882_1335963All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300018030|Ga0187869_10424597All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300018037|Ga0187883_10732187All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300018043|Ga0187887_10976339All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300018086|Ga0187769_10013570All Organisms → cellular organisms → Bacteria5268Open in IMG/M
3300021180|Ga0210396_10005217All Organisms → cellular organisms → Bacteria → Acidobacteria12597Open in IMG/M
3300021181|Ga0210388_10732206All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae860Open in IMG/M
3300021420|Ga0210394_10121003All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2267Open in IMG/M
3300021432|Ga0210384_11764329All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300021433|Ga0210391_11208608All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300021445|Ga0182009_10081299All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui1443Open in IMG/M
3300021475|Ga0210392_10442535All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300022714|Ga0242671_1021343All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales905Open in IMG/M
3300022717|Ga0242661_1070368All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300022721|Ga0242666_1078253All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales738Open in IMG/M
3300024220|Ga0224568_1025734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales608Open in IMG/M
3300024271|Ga0224564_1060673All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300025604|Ga0207930_1114779All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300025910|Ga0207684_10088605All Organisms → cellular organisms → Bacteria2637Open in IMG/M
3300025915|Ga0207693_10169868All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300025929|Ga0207664_11408648All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300025939|Ga0207665_10059611All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2584Open in IMG/M
3300026023|Ga0207677_11377795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57649Open in IMG/M
3300026078|Ga0207702_10575966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1103Open in IMG/M
3300026499|Ga0257181_1038556All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300027376|Ga0209004_1056820All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales659Open in IMG/M
3300027548|Ga0209523_1127379All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300027651|Ga0209217_1169589All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300027767|Ga0209655_10093124All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1002Open in IMG/M
3300027855|Ga0209693_10080173All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1611Open in IMG/M
3300027857|Ga0209166_10030463All Organisms → cellular organisms → Bacteria3282Open in IMG/M
3300027862|Ga0209701_10383026All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales788Open in IMG/M
3300027903|Ga0209488_10937526All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales604Open in IMG/M
3300028020|Ga0265351_1002921All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1269Open in IMG/M
3300028036|Ga0265355_1022294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57551Open in IMG/M
3300028759|Ga0302224_10204120All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300028776|Ga0302303_10079747All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1223Open in IMG/M
3300028785|Ga0302201_10345486Not Available585Open in IMG/M
3300028798|Ga0302222_10322759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57602Open in IMG/M
3300028806|Ga0302221_10417485All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300028807|Ga0307305_10199559All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae920Open in IMG/M
3300029914|Ga0311359_10645732All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300030053|Ga0302177_10076125All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1977Open in IMG/M
3300030399|Ga0311353_10163974All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2112Open in IMG/M
3300030520|Ga0311372_11282264All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300030693|Ga0302313_10431152All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57523Open in IMG/M
3300030740|Ga0265460_11366875All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales695Open in IMG/M
3300030760|Ga0265762_1002524All Organisms → cellular organisms → Bacteria3301Open in IMG/M
3300031027|Ga0302308_10847112All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300031233|Ga0302307_10111581All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1428Open in IMG/M
3300031525|Ga0302326_11165713All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella1064Open in IMG/M
3300031715|Ga0307476_10224322All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1368Open in IMG/M
3300031715|Ga0307476_11289957All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031720|Ga0307469_12375602All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57517Open in IMG/M
3300031754|Ga0307475_10353321All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1181Open in IMG/M
3300031754|Ga0307475_11539784All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300032180|Ga0307471_103943566All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300032783|Ga0335079_10976396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae866Open in IMG/M
3300032783|Ga0335079_11823306All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales591Open in IMG/M
3300033134|Ga0335073_10174307All Organisms → cellular organisms → Bacteria2698Open in IMG/M
3300033888|Ga0334792_053354All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300034124|Ga0370483_0017123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2108Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.09%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa10.09%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.34%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.59%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.67%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.75%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.83%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.83%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.83%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.83%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.83%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.83%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.92%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.92%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.92%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.92%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.92%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.92%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300001084Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024220Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028020Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4EnvironmentalOpen in IMG/M
3300028036Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2Host-AssociatedOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028785Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028806Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030693Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_035474502199352024SoilAESVALPKVLAEHDVVGGTAPARVQQALAAAEQRIAALRREMHAHA
JGI12648J13191_100618333300001084Forest SoilLAIHDVVGGTAPARVRQGIGVARKKIENLREEVNFHAHA*
JGI12659J15293_1013810013300001546Forest SoilASVLAVHDVPGGTAPGRVRHAIGITRKKIESLREEAHAHA*
JGI12635J15846_1029533933300001593Forest SoilHDVIGGTAPSRVRQEIAATRKKIESLREEVNFHAHA*
JGI12635J15846_1042205633300001593Forest SoilLASVLAVHDVPGGTAPSRVRHALGMTRKRIESIREEAHAHA*
JGIcombinedJ26739_10058971413300002245Forest SoilSLKLASVLAVHEVAGGTAPSRVRQAINATRKKIESLREEAHAHA*
Ga0070706_10010421243300005467Corn, Switchgrass And Miscanthus RhizosphereSVLAVHDVPGGTAPARVRHAIGVTRKKIESLREEAHAHA*
Ga0070732_1045106333300005542Surface SoilKLQSVLAIHDVPGGTAPARVRQAISTVRKKITFLREEVHAHA*
Ga0070761_1014988333300005591SoilLASVLAVHDVAGGTAPNRVRHAIGVTRKKIDALREEAHAHA*
Ga0070761_1021792133300005591SoilFDCEFHECLKLAAVLAIHDVAGGTSPARVRQGIAAARKKIEALREEVNFHAHA*
Ga0070762_1001079053300005602SoilGGTAPARVRQAIKSARTKIESLREEIHAHAQSDLA*
Ga0068851_1017174113300005834Corn RhizosphereHDVPGGTAPARVRQALGEARRKVETMREDVHAHA*
Ga0070766_1001890743300005921SoilFHECLNLDAVLAIHDVAGGTSPVRVRLGIAATRKKIEALREEVNLHAHA*
Ga0070766_1003774213300005921SoilPIFDKNFYDCLKPAAVLAIHDVIGGTAPSRVRQEIAATRTKIESLREEVNFHAHA*
Ga0070766_1125040623300005921SoilAVHDVPGGTAPARVRQAITIAKRKIHSLREEVHAHA*
Ga0066696_1010181413300006032SoilVLAIHDVPGGTAPARVQKAMKEAREKVNLLRENMHAHA*
Ga0075029_10011977443300006052WatershedsAVHDVPGGTAPGRVRQAIGAARKKIESLREEIHAHA*
Ga0075029_10102056813300006052WatershedsSVLAVHDVPGGTAPDRVQQAIGAARKKIESLREEVHAHA*
Ga0075435_10181701423300007076Populus RhizosphereLTLPAVLAAHDVVGGTAPGRVRQAIGAARKKIQSLREEVHAHA*
Ga0102924_111712613300007982Iron-Sulfur Acid SpringASVLALHDVPGGTAPSRVRQVIIATRKRIESLREEAHAHA*
Ga0116214_141514423300009520Peatlands SoilSLKLASVLAVHDVAGGTAPSRVRHAIHLARKKIESVREEAHAHA*
Ga0116218_123245733300009522Peatlands SoilAVHDVPGGTAPGRVRHAISVTRKKIESLREEAHAHA*
Ga0134080_1003849433300010333Grasslands SoilVLAFHNVPGGTAPARVQKAISEARIKINLLRESMHAHA*
Ga0126376_1270616913300010359Tropical Forest SoilIHDVPGGTAPARVRQAIADAKKKISSMREEIHAHA*
Ga0134066_1019749613300010364Grasslands SoilALSLLSVLAMHDVKGGTAPGQVKQAMAMARKNIESLREEVHAHA*
Ga0134066_1036265923300010364Grasslands SoilALHNVPGGTAPARVQQAISEARIKINLLRESMHAHA*
Ga0126381_100019731103300010376Tropical Forest SoilFKQSITLPAVLAAHDVLGGTAPGWVRQAIVAARKKIESVREEVHAHA*
Ga0137391_1046304313300011270Vadose Zone SoilESLKDFLKPASVLAMHDVAGGTAPARVQKAIAAARKKVDALRGEVHAHA*
Ga0137389_1024987613300012096Vadose Zone SoilHDVPGGTAPQRVRQAIAAARKKVGLLREEAHAHA*
Ga0137362_1000620513300012205Vadose Zone SoilVLNIHDVPGGTAPVRVRQAMADARKKVESMREVVHAHA*
Ga0137378_1065360333300012210Vadose Zone SoilVLAIHDLPGGTAPAFVRQAIAGARKKAGTLREEAHAHA*
Ga0137360_1018668633300012361Vadose Zone SoilLSSVLAIHDVPGGTAPARVQQVISEARIKVNLLRESMHAHA*
Ga0137395_1004792213300012917Vadose Zone SoilLAIHDLPGGTAPAFVRQAIAGARKKAGTLREEAHAHA*
Ga0137395_1031915813300012917Vadose Zone SoilSVLAIHDVLGGTAPARVRSAIAAAKKKVEALREEIHAHA*
Ga0137395_1075361813300012917Vadose Zone SoilKDFLKPASGLAMHDVAGGTAPARVQKAIAAARKKVDALRGEVHAHA*
Ga0137359_1015231833300012923Vadose Zone SoilDVVGGTAPARVRQGLAAAKRKIESLREEVNLHAHA*
Ga0164306_1121977923300012988SoilPSAVLAIHDVPGGTAPQRVQKAIAAARKKVEALREEIHAHA*
Ga0181531_1065352913300014169BogSVLAIHDVVGGTAPARVRQGIVAARKKIEALREEANVHAHA*
Ga0181526_1075198623300014200BogLTVHDVPGGTAPNRVRQAISVTRKKIESVREEAHAHA*
Ga0182018_1014677713300014489PalsaHDVVGGTAPARVRQGIAAARKKIEALREEVHFHAHA*
Ga0182018_1049889723300014489PalsaKPAAVLAIHDVVGGTAPARVRQGIAAAKKKIESLRQEVHAHA*
Ga0182024_1040281033300014501PermafrostAAVLAIHDVGGGTAPARVRQGIAAAKKKINSLREEVHAHA*
Ga0182024_1074214513300014501PermafrostQSVLAVHDVPGGTAPARVWQAVAGAQLRIEAIREECHAHA*
Ga0182034_1141745523300016371SoilAAVLAAHDVLGGTAPSRVGPAIVAARKKIESIREEVHAHA
Ga0134069_137147823300017654Grasslands SoilLHDVPGGTAPSRVRQALAQSKKRIELIREEAHAHA
Ga0187821_1017762113300017936Freshwater SedimentMHDVKGGTAPGQVKQAMAVARKTIESLREEVHAHA
Ga0187817_1089854623300017955Freshwater SedimentKDCLRPAAVLAIHDVVGGTPPGRVRQGILAARKKIESLREEVHAHA
Ga0187882_133596313300018021PeatlandPAAVLAIHDVVGGTAPARVRQGIAAAKEKIESLREEINFHAHA
Ga0187869_1042459713300018030PeatlandIHDVVGGTAPARVRQGIGAARKKIESLREALHAHA
Ga0187883_1073218723300018037PeatlandKLASVLAVHDVAGGTAPNRVRQAIHVVRKRIEAVREEAHAHA
Ga0187887_1097633913300018043PeatlandKLASVLTVHDVPGGTAPNRVRQAISVTRKKIESVREEAHAHA
Ga0187769_1001357013300018086Tropical PeatlandLKPAAVLAIHDVVGGTAPGRVRQGIAAAKKKIEGVREEVKIHAHA
Ga0210396_10005217123300021180SoilSLKLAAVLAVHDVAGGTAPSRVRQAIQITRKKIESLREEAHAHA
Ga0210388_1073220633300021181SoilVLAVHDVPGGTAPGRVRQAIGAARKKIESLREEVHAHA
Ga0210394_1012100313300021420SoilECLKPASVLAIHDVAGGTAPVRVRQAIAAARKQIETLREEVHAHA
Ga0210384_1176432923300021432SoilNPVFDESFHDYLKPSSVLAIHDVVGGTAPNRVRQGIAEARKKIESLREEVNFHAHT
Ga0210391_1120860823300021433SoilALKPAAVLAIHDVIGGTAPGRVRQGMAAAKKKIESLREEVKIHAHA
Ga0182009_1008129913300021445SoilLAMHDVKGGTAPSQVKQAVAMARKVVESLREEVHAHA
Ga0210392_1044253513300021475SoilKPASVLAIHDVAGGTAPVRVRQAIAAARKQIETLREEVHAHA
Ga0242671_102134333300022714SoilKLAAVLAIHDVAGGTTPVRVRQGIGAARKKIEALREEVNFHAHA
Ga0242661_107036813300022717SoilLKPASVLAIHDVVGGTAPGRVRQAVAAAKEKIQSLREEVKIHAHA
Ga0242666_107825323300022721SoilDFYECLTLHAVLAVHDVAGGTAPERVRQAIKSARTKIESLREEIHAHAQSDLA
Ga0224568_102573413300024220Plant LitterLAIHDVAGGTAPARVRQGIAAARKKIEALREEVNLHAHA
Ga0224564_106067323300024271SoilRECLKPAAVLAIHDVAGGTAPSRVRQGIAAAKNKIQSLREEVRIHAHA
Ga0207930_111477923300025604Arctic Peat SoilLAIHDVPGGTAPARVRNAITTAKKRIEALREEVHAHA
Ga0207684_1008860543300025910Corn, Switchgrass And Miscanthus RhizosphereSVLAVHDVAGGTAPSRVRHAINAARTRIESLREEAHAHA
Ga0207693_1016986823300025915Corn, Switchgrass And Miscanthus RhizosphereVWILKIGGPAPVRVRQAIAEARKKVEFMREEIHAHA
Ga0207664_1140864813300025929Agricultural SoilAIHDVAGGTAPMRVKEAIAAARKKSSAQREEAHAHA
Ga0207665_1005961133300025939Corn, Switchgrass And Miscanthus RhizosphereIHDVPGGTAPARVRQAIADAKVKVEAMREDIHAHA
Ga0207677_1137779523300026023Miscanthus RhizosphereIHDVTGGTAPARVRQAIADARVKVEAMREDIHAHA
Ga0207702_1057596633300026078Corn RhizosphereLSSVLAMHDVKGGTAPGQVRQAIAAARKTIESLREEVHAHA
Ga0257181_103855623300026499SoilIHDVQGGTAPARVRQAIVLAKKRISTMLEEIHAHA
Ga0209004_105682013300027376Forest SoilVHDVPGGTAPGRVRQAIGAARKKIESLREEVHAHA
Ga0209523_112737923300027548Forest SoilYEALKLASVLAVHDVEGGTAPNRVRQAMGKARKQIESLREEVHAHA
Ga0209217_116958923300027651Forest SoilLTSVLAIHDVQGGTAPARVRQAIVLAKKRISVMLEEIHAHA
Ga0209655_1009312433300027767Bog Forest SoilLAIHDVAGGTAPARVRQGIAAARKRIESLREEVNFHAHA
Ga0209693_1008017333300027855SoilLKPASVLAIHDVAGGTAPARVRQGIGAARKKIEALREEVNFHAHA
Ga0209166_1003046313300027857Surface SoilVLAIHDVPGGTAPARVRQAVSATRKKIELLREEVHAHA
Ga0209701_1038302623300027862Vadose Zone SoilSVLEIHDVPGGTAPARVRQAIAAARKTIDSLREERHAHA
Ga0209488_1093752623300027903Vadose Zone SoilLAIHDVIGGTAPARVRQEIATARKKIECLREGVHAHA
Ga0265351_100292133300028020SoilAAVLAIHDVVGGTAPARVRQGIAAAKKTIESLREEIHAHA
Ga0265355_102229413300028036RhizosphereCLKPAAVLAMHDVVGGTAPGRVRQGIAAARKKIESLREEVNLHAHA
Ga0302224_1020412013300028759PalsaDVVGGTAPARVRQGIAAARKKIDSLREEVNFHAHA
Ga0302303_1007974733300028776PalsaCLKPASVLAIHDVVGGTAPARVRQGIAAARKKIEFLREEVHAHA
Ga0302201_1034548623300028785BogLNPAFDAGFQECLNPASVLAIHDVVGGTAPTRVRQGIAAARKKVESLREEVHAHA
Ga0302222_1032275923300028798PalsaELHTLNPVFDESFRDCLTPASVLAIHDVVGGTAPAQVRQGIAAARKKIEALREEVNFHAH
Ga0302221_1041748523300028806PalsaAVLAIHDVVGGTAPARVRQGIAAARKKIEALREEVNFHAHA
Ga0307305_1019955913300028807SoilLTLQAVLNIHDVPGGTAPARVRQAVIDASVKVESMREEVHAHA
Ga0311359_1064573223300029914BogASVLAIHDVVGGTAPARVRQGIAAARKKIESLREEVNLHAHA
Ga0302177_1007612533300030053PalsaESFRDCLTPASVLAIHDVVGGTAPAQVRQGIAAARKKIEALREEVNFHAHA
Ga0311353_1016397433300030399PalsaKPAAVLAIHDVVGGTAPARVRQGIAAARKKIEALREEVNFHAHA
Ga0311372_1128226413300030520PalsaAAVLAIHDVVGGTAPARVRQGIAAARKKIEALREEVNFHAHA
Ga0302313_1043115223300030693PalsaSVLAIHDVVGGTAPARVRQGIAAARKKIEFLREEVHAHA
Ga0265460_1136687523300030740SoilLTLAAVLGVHDVAGGTAPGRVRQAIKSARTKIESLREEIHAHAQSDLT
Ga0265762_100252453300030760SoilKPASVLAIHDVVGGTAPARVRQGIAAARKTIEALREEVNFHAHA
Ga0302308_1084711213300031027PalsaAVLAVHDVAGGTAPARVRQAIKSARTKIESLREEIHAHAQSDLA
Ga0302307_1011158113300031233PalsaVHDVAGGTAPARVRQAIKSARTKIESLREEIHAHAQSDLA
Ga0302326_1116571333300031525PalsaQSVIDMHDVPGGTASARVRQAIADARQRVHALRENVHAHA
Ga0307476_1022432213300031715Hardwood Forest SoilAIHDVAGGTTPVRVRQGIGAARKKIEALREEVNFHAHA
Ga0307476_1128995723300031715Hardwood Forest SoilLKPDAVLAIHDVVGGTAPVRVQKAIGAAKHKIGSLREEVHAHA
Ga0307469_1237560213300031720Hardwood Forest SoilIHDVPGGTAPARVAQAIAVARKKAGAVREEAHAHA
Ga0307475_1035332113300031754Hardwood Forest SoilSVLAVHDVVGGTAPSRVRQAINATRKRIESLREEAHAHA
Ga0307475_1153978413300031754Hardwood Forest SoilKLASVLAVHDVPGGTAPSRVRHAINVTRKRIASVREEAHAHA
Ga0307471_10394356623300032180Hardwood Forest SoilLYLSLPSVLALHNVPGGTAPARVQQAISEARNKIILLRETMHAHA
Ga0335079_1097639613300032783SoilFKPSLTLTAVLGVHDVVGGTAPGRVRQAIGAARKKVESLREEVHAHAHA
Ga0335079_1182330613300032783SoilQQVLAIHDVAGGTAPARVKQALAEGKKKVDALREELHAHA
Ga0335073_1017430713300033134SoilASVLAIHDVPGGTAPERVRKALGVARNKIQSLREEVHAHA
Ga0334792_053354_1075_12453300033888SoilSPAFDRGFYDCLKPASVLAIHDVVGGTAPNRVIDGIRAARQKIETLREEVQFHAHA
Ga0370483_0017123_1953_21083300034124Untreated Peat SoilFDASFQECLKPAAVLAIHDVVGGTAPSRVRQGIAAARKKIESLREEVHAHA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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