Metagenome Family F088350

Basic Information
Family ID	F088350
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	138 residues
Representative Sequence	LPRITPYSFFISFFLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGY
Number of Associated Samples	98
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.77 %
% of genes near scaffold ends (potentially truncated)	11.93 %
% of genes from short scaffolds (< 2000 bps)	7.34 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (88.073 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.853 % of family members)
Environment Ontology (ENVO)	Unclassified (34.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.789 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 19.48% Coil/Unstructured: 62.34%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03808	Glyco_tran_WecG	12.84
PF13439	Glyco_transf_4	5.50
PF05711	TylF	4.59
PF09721	Exosortase_EpsH	3.67
PF01370	Epimerase	2.75
PF05016	ParE_toxin	1.83
PF11885	DUF3405	0.92
PF05050	Methyltransf_21	0.92
PF13884	Peptidase_S74	0.92
PF01797	Y1_Tnp	0.92
PF01850	PIN	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	12.84
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
All Organisms	root	All Organisms	11.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
cellular organisms	root	All Organisms → cellular organisms	11.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.07 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.34 %
Lentisphaera araneosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera → Lentisphaera araneosa	0.92 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005180\|Ga0066685_10015101	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300005713\|Ga0066905_100704773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	867	Open in IMG/M
3300006046\|Ga0066652_100043979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3316	Open in IMG/M
3300012198\|Ga0137364_10293447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1206	Open in IMG/M
3300012202\|Ga0137363_10014471	All Organisms → cellular organisms → Bacteria	5149	Open in IMG/M
3300012210\|Ga0137378_10176536	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300012354\|Ga0137366_10645082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	757	Open in IMG/M
3300012361\|Ga0137360_11276015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	635	Open in IMG/M
3300012929\|Ga0137404_10015884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5330	Open in IMG/M
3300013296\|Ga0157374_12788331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300015372\|Ga0132256_100433448	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → Lentisphaeraceae → Lentisphaera → Lentisphaera araneosa	1420	Open in IMG/M
3300019789\|Ga0137408_1030386	All Organisms → cellular organisms → Bacteria	5662	Open in IMG/M
3300021560\|Ga0126371_12273359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.40%
Host-Associated	Host-Associated	15.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.57%
Plants	Host-Associated → Plants	15.60%
Aquatic	Environmental → Aquatic	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.84%
Sediment	Environmental → Aquatic → Sediment	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.34%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ43975_100227671	3300002899	Soil	MTFTRRVKGNSVKTVDAIKPDWKGGLFIGFFLVFLGSTVFAGTSPVTTEAQGNPSPTAAVVQSPAAKQGLNFVVGAHGLDSLSFNGQSLLVSPQSGELQLQKSAFRAVLDALLPGSSSRVATPNKPADAIDLSY
Ga0062595_1004110101	3300004479	Soil	MEIMGPISLAFLAATVFADTRLAKAESQQNQTPNSSVVQSPASKQGLNFVVGAQGLDSLSFNGQSLLVSSESGELQPQKSVFRAVLDALVPRSSPRVATPDKKADTVDLSYPWGRISCAYGKQDDR
Ga0062595_1023605151	3300004479	Soil	MISGQWQAVAPQIDC*AFQLCSFSHQVPHIIARSSFISFFLALLAGTAFADTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPERGELRLQKSVFRAVLDALLPGSSSRAGTPNKADTIDLSYPLGR
Ga0066685_100151011	3300005180	Soil	MSRGLLSDVMDQRSVIRSQTSVVGRHVTVHSSLIGFFLALLAPTVFAGPSPVKTESQRNRTPTPAVVQSPAAKQGLNFVVGARGLESLSFNGQSLLVSPASGELQPEKSVFRAVLDAFLSRSSSRVATPNKPADTVDLSYPWGRVSCAYAKQDDRITMRITVS
Ga0066685_103660331	3300005180	Soil	LPHITPHSSLIGFFLALLAATAFGGASPVETESQQDQTSTPEVRQSPAPKQGLNFAVGAHGLDSLSFNGQSFLVSPESGELQPQKSVFRAVLEALFPRSSPGVAKRNESSDTVDLTYPWGRISCVYG
Ga0066678_100251681	3300005181	Soil	VPHIIVRSSFIGFSLALLAATVFTDTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLDALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKITMKIEISNTSSE
Ga0070660_1007922012	3300005339	Corn Rhizosphere	MKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGYSKQGDRLTMRLEVSNTSS
Ga0070689_1001739312	3300005340	Switchgrass Rhizosphere	MDRSGNQNQRTNEGLIRMKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPEGGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGYSKQGDRLTMRLEVSNTSS
Ga0066689_100320441	3300005447	Soil	VPHIIVRSSFIGFSLALLAATVFTDTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLDALLPGSSSRAGTPNKKADTIHLSYPWG
Ga0070695_1007934952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPYQLPHITRHGSFIGFFLALLATTVFAGTTPVKTESQRNRTPTPAVLQSPVSKQGLNFVVGARGLDSLSFNGQSLLASPESGELQPQKSVFRAVLDVLLPRSLSPSATPNKNTDTIDLSYPWGRISCAY
Ga0070704_1001824582	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSHVARSLFISFFLVFLAGTVFANASSVKTGSQRNGTLTPALVQSPAANQGLSFSVGDHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPTPTPTKNTDTVDLTYPWGRISCAYGKQGNRLTMRLEVSN
Ga0066701_104792602	3300005552	Soil	MTFTRRVTGNSVKTVEAIKADWKWGTFIGFFLPLLAATVFADTSPVKTESQQNRTPTPAVLQSPASKQGLNFAVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALVPRSSSPSATPNKNTDTIDLSYPWGRISCAYGKQD
Ga0066701_106420471	3300005552	Soil	VPHIIARSSFISFSVALLAATVFADTSPLKKESQRNRTPGPALLQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIHLSYPWGRISCSY
Ga0066661_103431082	3300005554	Soil	MTPRSSFTGFLLVLLAATVFACTSPAKAESRPNRMPTPAVLQSDAPKQGLDFVVGAHGLDSLSFNGQSLLVSPETGELRPQKSVFRAVLDAILPRPSPRVATPSKQTNTVDLSCPWGRVSCAYGKQDDRLTMRIEVSNTSEEPLDDFSI
Ga0066700_106187871	3300005559	Soil	VPHIIARSSFISFSVALLAATVFADTSPLKKESQRNRTPGPALLQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLDALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKITMKIEISNTSSE
Ga0066905_1007047733	3300005713	Tropical Forest Soil	MTFMRRIARGSFIRLFLAISAATVLAGASLIRAEPQRNRTPSPAVLQSPAPKQGLNFVVGARGLDSLSFNGQSLLVSPASGEFQPQKSAFRAVLDAVLPFSSAGVATPNKRPDTIDLSYPWGRVSCVYGKQGDRLKMSIEVSNVSAKTIDQLSLRLMEL
Ga0068861_1006267032	3300005719	Switchgrass Rhizosphere	MPYQLPHITPHGSFIGFFLALLATTVFAGTTPVKTESQRNRTPTPAVLQSPVSKQGLNFVVGAHGLDSLSFNGQSLLASPESGELQPQKSVFRAVLDALLPGSSSRVATPNKQADTIDLSYPWG
Ga0066903_1019161543	3300005764	Tropical Forest Soil	MKFLLALLAATVFADPGAEKTESQRNPTPTAAARQSPAPKQGLNFVVGARGLDSLSFNGQSLLTSTDHGELQPWKSVFRAVLDAVLPLSSAGVATPNKRPDTIDLSYPWGRISCAYRKQDDRLTMRI
Ga0066652_1000439795	3300006046	Soil	LPHITPHSSLIGFCLALLAATAFAGTSPVETVSQRNGTPTPAVVPSPAPKQGLNFVVGAYGLDSLSFDGQSFLLSPESGELQPQKSVFRAVFDALLPRSSSPSATPNKQADTIDLSYPWGRISCAYGKQHDKLTMRIEVSNTSSEPLNEFSVRLME
Ga0075435_1008326741	3300007076	Populus Rhizosphere	MAFTNANRSLNGFVISLISFLVSFAPSVFADTRPSKAESQRNGTQTPAVFQSPAPKEGLNFVVGSHGLESLSFNGQSLLRSAQEGELQPQRSGLRAVLDALFSRSSSEVAMTNKQPDTIDLSYRWGRVSCAYGKQENRITMK
Ga0099793_100521612	3300007258	Vadose Zone Soil	VPHIIVRSSFIGFSLALLAATVFTDTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRPQKSVFRAVLEALLPGSSSRARTPNKKADTIDLSYPWGRISCSYGKEDDKITMKI*
Ga0066710_1001622125	3300009012	Grasslands Soil	MVAGAYRSSDRLLNSLISLFLVSLAATVWADMSPVKTGSQQNRTQTSALVESPPPKQGLNFAVGERGLTSLSFNGQSLLASSENGELQPQKSVIRAMLDALLPRPSSGVAIGKKQPNTIDLTYRWGRISCAYGKQDNV
Ga0066710_1018535542	3300009012	Grasslands Soil	LLNFSTLLIPYQLPHITPYSSFIGFFLALLAATAFAGTSPVKTVSQRNGTPTPAVVLSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELQPQKSVFRAVLDALLPRSSSRVATPNKAADTVDLKYPWGCISCAYRKQDDRLTMRIEV
Ga0066709_1005294284	3300009137	Grasslands Soil	MVAGAYRSSDRLLNSLISLFLVSLAATVWADMSPVKTGSQQNRTQTSALVESPPPKQGLNFAVGERGLTSLSFNGQSLLASPENGELQPQKSVIRAMLDALLPRPSSGVAIGKKQPNTIDLTYRWGRISCAYGKQDNVITMKIEVSNTGSEPLNGFSLRLMELIFP
Ga0075423_130655511	3300009162	Populus Rhizosphere	MTFTNANRSLNGFVISLISFLVSFAPSVFADTRPSKAESQRNGTQTPAVFQSPAPKEGLNFVVGSRGLESLSFNGQSLLRSAQEGELQPQRSGLRAVLDALFSRSSSEVAMTNKQPDTIDLSYRWGRISCAYGKQENRITMKIEVSNTGSEPLHE
Ga0105249_100312596	3300009553	Switchgrass Rhizosphere	VSHVARSLFISFFLVFLAGTVFANASSVKTGSQRNGTLTPALVQSPAANQGLSFSVGDHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPSATPTKNTDTVDLTYPWGHISCAYG
Ga0105249_106487361	3300009553	Switchgrass Rhizosphere	MWSAVVRSSFIVFSVAVSAATACADPDAEKTEPQRDPTATAAPRLSSASKQGLSFVVGARGLDSLSYNGESLLVSPKTGELQTEKSALRTVLDAILPLSSAGVATANKKPNTIDLNYSWGRVSCAYGKQGDRLTMCIEV
Ga0099796_104908891	3300010159	Vadose Zone Soil	VPHIIVRSSFIGFSLALLAATVFADTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIDLSYPWGRISCSYGKEDDKITMK
Ga0134070_100674271	3300010301	Grasslands Soil	VKTVEAIKPDWKWGTFIGFFLPFLAATVFADTNPLKTESQGNPTVTPAVVQSPDTKQGLKFVVGSHGLDSLSFNGQSLLVSLESGELQPQKSVFRAVLDALVPRSSPRAATPDIKADTVDLSYPWGRI
Ga0134082_103970431	3300010303	Grasslands Soil	VIGYQLSALLAATVFAGTSPVKTESQRNRIPTSAVLQSSAPKQGLDFVVGAHGLDSLSFNGQSLLVSPENGELQPQKSVFRAVLDAIFPRSSSQVATPNKRRDTIDLSYPWGGISCAYGKQDDRLTMRIEV
Ga0134088_100289354	3300010304	Grasslands Soil	VKTVEAIKADWKWGTFIGFFLPLLAATVFADTSPVKTESQQNRTPTPAVLQSPASKQGLNFAVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALVPRSSPRVATPDKKADTVDLSYPWGRISCAYGKQDDRLTMRLEVSNTSS
Ga0134067_101018251	3300010321	Grasslands Soil	MKFLLALLAATAFADTGAEKTESQRNPTPIAAVRQSSAPKQGLNSVVGARGLDSLSFNGESLLVSLERGELQPQKSAFRTVLDAVLPLSSAGAATPNKRPDMIDLSYPWGRISCAYGKQDDRLTMRIEAFNTSSKAVNEFSVRLME
Ga0134064_101138551	3300010325	Grasslands Soil	VIGYQLSALLAATVFAGTSPVKTESQRNRIPTSAVLQSSAPKQGLDFVVGAHGLDSLSFNGQSLLVSPENGELQPQKSVFRAVLDAIFPRSSSQVATPNKKTDTVDLSYPW
Ga0134063_107004051	3300010335	Grasslands Soil	LPHITPHSSLIGFCLALLAATAFAGTSPVETVSQRNGTPTPAVVPSPAPKQGLNFVVGAYGLDSLSFDGQSFLLSPESGELQPQKSVFRAVFDALLPRSSSPSATPNKQADTIDLSYPWGRISCAYGKQDDKI
Ga0134071_100267384	3300010336	Grasslands Soil	MKTVEAIKADWKWGTFIGFFLPLLAATVFADTSPVKTESQQNRTPTPAVLQSPASKQGLSFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSIFRAVLDALVPRSSSPSATPNKNTDTIDLSYPWG
Ga0134062_104382221	3300010337	Grasslands Soil	VIGYQLSALLAATVFAGTSPVKTESQRNRIPTSAVLQSSAPKQGLDFDVGAHGLDSLSFNGQSLLVSPENGELQPQKSVFRAVLDAIFPRSSSQVATPNKKTDTVDLSYPWGRISCAYGKQDDRI
Ga0126370_118559001	3300010358	Tropical Forest Soil	MVASDNSSSKGLLSSLISFFLVLLTAAVFADTGPVNTESQHNGVPTPAVFQSPVPKQGLNFVVGSLGLESLSFNGQSLLASPENGELRPEKSFFRAVLDAFLPGSSAGVATPNKKGDIVDLSYPWGHVSCSYGKQGD
Ga0126376_124321652	3300010359	Tropical Forest Soil	MKFLLALLAATACADPGAEKTKSQRNPTLTAGARLSPAPKQGLNFVVGNHGLDSLSFNGESLLVSPESGELQPQKSVFRAVLDALLPFSSAGVATPNKPADTIDLSYSWGRISCTYGKQGDKITMRIEVSNTSSE
Ga0126378_103480861	3300010361	Tropical Forest Soil	MELRSVEARVRALTAFIGFFLALLATTAFAGTSALKTESQQDRTPSAAVFQSPAPKQGLNFVVGAHGLDSLWFNGQSLLLSPENGELQPQKSVFRAVLEALFPRSSSPIATPNENTDTVDLSYPWG
Ga0134066_102562451	3300010364	Grasslands Soil	VKTVEAIKPDWKWGTFIGFFLPFLAATVFADTNPVKTESQGNPTVTPAVVQSPDTKQGLKFVVGSHGLDSLSFNGQSLLVSLESGELQPQKSVFRAVLDALVPRSSPRAATPDIKADTVDLSYPWGRISCAYGKRDDR
Ga0126381_1039972841	3300010376	Tropical Forest Soil	MELRSVEARVRALTAFIGFFLALLAATAFAGTSALKTESQQDRTPSAAVFQSPAPKQGLNFVVGAHGLDSLWFNGQSLLLSPENGELQPQKSVFRAVLDALLSPPSSRVATPNQRADTVDMSFPWGRISCAYGKQDDRVTIRIEVS
Ga0134126_129163821	3300010396	Terrestrial Soil	VPHTPPHSSFIGFFLPFLAATVFADMSLVKTESQQNRGPSPAVLQSPASKQGLNFVVGAHGLDSLSFNGQSFLVSPESGELQPQKSFFRAVLDALLPRSSSPSATPNKNTDTVDLS
Ga0134124_115953141	3300010397	Terrestrial Soil	MPYQLPHITPHGSFIGFFLALLATTVFAGTTPVKTESQRNRTPTPAVLQSPVSKQGLNFVVGAHGLDSLSFNGQSLLASPESGELQPQKSVFRAVLDALLPGSSSRVATPNKQADTIDLSYPWGHVSCAYSKQDDKITMRIEVSNT
Ga0134123_109130442	3300010403	Terrestrial Soil	VSHVARSSLINFFLALLAATVFADASPVKTESQQNGTLTPAVVQSPAANQGLRFSMGAHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPTPTPTKNTDTVDLTYPWGRISCAYGKQGNRLTMRLEVSNTSSKPLN
Ga0137364_102934472	3300012198	Vadose Zone Soil	MSYQPLPHITAHSSLIGFFLALFAATVFAGTAPLMTESQGNQTPTLAVVPSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELQPQKSVFRAVLDAFLPRSSSRVATPNKAADTVDLKYPWGCISCAYGKQDDRLTMRIDVSNTSSEPLNEFS
Ga0137365_102743472	3300012201	Vadose Zone Soil	MSYQPLPHITAHSSLIGFFLALFAATVFAGTAPLMTESQGNQTPTLAVVPSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELQPQKSVFRAVLDAFLPRSSSRVATPNKAADTVDLKYPLGCISCAYRKQDDRLTMRIEVSNTSSEPLN
Ga0137365_104024742	3300012201	Vadose Zone Soil	VAVASANRSSNRFVISLISFFLVLLAASVFADTSPVKAESQRNGAPAPAAFQSPAPKQGLNFVVGSRGLESLSFNGQSLLRSAQEGELQPQKSVYRAVLDALLPGPSSGVAMANIQPDTIDLSYRWGRISCAYGKQDNR
Ga0137363_100144711	3300012202	Vadose Zone Soil	LTVVTLTSILSRTRERRKVAADAQRERVISDLLSVISYQLSFFLVLFAATVFAGTSPLKAESQRNQAPTPILVQPPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSSQVATPNKQTDTVDLSYPSGRVSCAYGKQGDRLTMSIEVSNASAKTIDQLS
Ga0137362_101452764	3300012205	Vadose Zone Soil	MCGWIEVMGPIFVAFFAATVFADTSLLNTESQQNRTPTPAVLQSPDSKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDAFFPRSSSPSATPNKNTDTIDLSYPWGRISCAYGKQDDRLTMR
Ga0137362_109952401	3300012205	Vadose Zone Soil	MSYLAVLALAVFAVTSPVKAESQRNRTSTPSVTQSPAPKQGLNFAVGERGLTSLSFNGQSLLVSPESGEFQPQKSVFGAVLDALLPRSPLPVAAPNKTPDTVDITYPWGRLS
Ga0137380_100737471	3300012206	Vadose Zone Soil	MAVASAHRSSDRFLSFLISFFLVLLAVTVVADTSPVKTESQRNRAPTPAVLQSPVPKQGLNFVVGSHGLDSLSFNGQSLLVSPENGELRPQKSVFHAVLDALLPRSSPGVATPNKNGDTIDLNYPWGRVSCSYGKQGDKITMRIEV
Ga0137379_113669842	3300012209	Vadose Zone Soil	VSNFSTLHIPYQLSLITPHSSLIGFFLALFAATVFAGTAPLMTESQGNQTPTPAVVPSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELQPQKSVFRSVLDAFLPRSSSRVATPNKAADTVDLKYPWGCISCAYGKQDDR
Ga0137378_101765363	3300012210	Vadose Zone Soil	VPHIIARSSFISFSVALLAATVFAETSPLKKESQRNRTPGPALLQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKITMKIEISNTSSEPLNELSIRLM
Ga0137377_101068541	3300012211	Vadose Zone Soil	VKFSTLLIPYQLPHITPHSSFIGFFLALFAATLFAGTSPVKTESQRNQTPTPAALQSPAPKQGLNFLVGAHGLDSLSFNGQSLLVSPESGDLQPQKSVFRAVLDAILPRPSSQVATTNKPADTVDLSYPWGRVSCAYAKQDDRITMRITVSNA
Ga0137386_110858562	3300012351	Vadose Zone Soil	MRYQPLPHITAHSSLIGFFLALFAATVFAGTAPLMTESQGNQTPTPAVVPSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELQPQKSVFRSVLDAFLPRSSSRVATPNKAADTVDLKYPVGCISCAYR*
Ga0137366_100358901	3300012354	Vadose Zone Soil	MSYQPLPHITAHSSLIGFFLALFAATVFAGTAPLMTESQGNQTPTLAVVPSPAAKQGLNFVVGARGLDSLSFDGQSFLLSPESGELESQKSVFRAVLDAFLPRSSSRVATPNKAADTVDLKYPWGCISCAYGKQDDRLTMRIEVSNTSSEP
Ga0137366_106450821	3300012354	Vadose Zone Soil	MPHITPHSSFIGFCLALLAAIAFAGTSPVQTVSQRNGTPTPAVLQLPAPKQGLNFVVGTRGLDSLSFDGESFLLSPESGELQPQKSVFRAVLDAFLPRSSSRVATPNKQADTINLSYPWGRISGAYGKQDDRLTMRIEVSNTSSEPLNEFSVR
Ga0137384_109612541	3300012357	Vadose Zone Soil	VKTVEAIKPDWKWGPFIGFLLPFLAATVFADTSLVKTESQQNRAPTPALLQSPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSPRVADPNKNTDIVDLSYPW
Ga0137368_105197951	3300012358	Vadose Zone Soil	MEVMAPIVLAFLAVTVFADTSLVKTELQQNRTPTPAVLQSPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGKLQPQKSVFRAVLDALVPRSSPRVVTPGKKANTVDLSYPWGRLSCAYGKQDDRL
Ga0137375_105023591	3300012360	Vadose Zone Soil	MEVMAPIFLAFLAVTVFADTSLVKTELQQNRTPTPAVLQSPASKQGLNFVVGAHGLDSLLFNGQSLLGSRESGELQPQKSVFRAVLDALVPRSSPRVVTPGKKADTVDLSYPWG
Ga0137360_112760151	3300012361	Vadose Zone Soil	VISDLLSVISYQLSFFLVLFAATVFAGTSPLKAESQRNQAPTPVLVQPPASKPGLNFVVGAHGLDSLSFNGQSLLVSPASGELQPQKSVFRTVLDALLPRSSSRVATPNKPADTVDLSYPWGRVSCAYAKQDDRITMRITVSNASEKPIDQLSLR
Ga0137361_113215441	3300012362	Vadose Zone Soil	VPHIIARSSFISFFLALLAGTAFADTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIHLSYPWGRIS
Ga0137358_100718984	3300012582	Vadose Zone Soil	MGPIFVAFFAATVFADTSLLKTESQQNRTPTPAVLQSPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDAFFPRSSSPSATPNKNTDTIDLSYPWGRISCAYGKQ
Ga0157294_103043011	3300012892	Soil	LPRITPYSFFISFFLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRI
Ga0137359_105730004	3300012923	Vadose Zone Soil	VVGDLLSVISYQLSFSLAVLAATVFTVASPVKTESQRNRIPIPAVLQSPAPKQGLNFVVGAHGLDSLSFNGQSLLASPESGELQPQKSVFRAVLDALLPRSSSPVATPNKPADT
Ga0137416_122402021	3300012927	Vadose Zone Soil	MVASANRSSDRFLSSLISFFLVLLAASVVADTSPVKAESQRNGAPAPAAFQSPAPKQGLNFVVGSRGLESLSFNGQSLLCSAQEGELQPQKSVFRAVLDALLPGPSSGVAMANMQPDTIDLGYRWGRISCAYGKQDNRITMRIEVSNTGPEPLNEF
Ga0137404_1001588412	3300012929	Vadose Zone Soil	LLKSSILLIFYQVPPVARSLFISFFLALLAATVFADTSPLKTESQQNRTPTPPVVQSPASKQGLSFVVGAHGLDSLSFNGQSLLISPESGELQPQKSLFRAVLDALVSRSSSPSATRNKNSDTIDLSYPWGRISCAYGKQDDRLTMRLE
Ga0164299_102601982	3300012958	Soil	VRHIAPRSSFIGFSLAFLAAAVFADTSPVKKELPANSTPTRVLQSPASKQGLNFVVGAHGLDSLSFNGQSLIGSPESGELQPQKSVFRTVLDAIVPRSSPRIATPDKKADTVDVSYPSGRISCAYGKQDDRLTMRLEV
Ga0164307_105059461	3300012987	Soil	VIRLRQGCCGQVGYQLSAFLAATVVVGTNSVKAESQQNRTPTPAVLQSPAPKQGLNFVVGPRGLTSLLFNGQSLLASPESGELQPQKSVFRAVLDALVPRSSPPVATPNQHTDTVDVSY
Ga0164306_115911431	3300012988	Soil	VRHIAPRSSFIGFSLAFLAAAVFADTSPVKKESPANSTPTRVLQSPASKQGLNFVVGAHGLDSLSFNGQSLIGSPESGELQPQKSVFRTVLDALVPRSSPRIATPDKKADTVDVSYP
Ga0157374_127883311	3300013296	Miscanthus Rhizosphere	VRHIAPRSSFIGFSLAFLAAAVFADTSPVKKESPANSTPTRVLQSPASKQGLNFIVGAHGLDSLSFNGKSLLVSPASGELQPEKSVFRTVLDALVPRSSPRIATPDKKADTVDVSYPSGRISCAYGKQDDRLTMRLEVSNTSSKPLNELSLRL
Ga0157378_109280012	3300013297	Miscanthus Rhizosphere	VSHVARSLFISFFLVFLAGTVFANASSVKTGSQRNGTLTPALVQSPAANQGLSFSVGDHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPSATPTKNTDTVDLTYPWGHISCAYGKQGNRL
Ga0134081_103620881	3300014150	Grasslands Soil	VVGRHVTVHSSLIGFFLALLAATVFAGPSPVTPESQRNRTPTPAVLQSPAPKQGLNFVVGAHGLESLSFNGQSLLVSPASGELQPEKSVFRAVLDAFLSRSSSRVATPNKPADTVDLSYPWGRVSCAYAKQDDRITMRITVSNASEKPIDQLSLR
Ga0134075_105411351	3300014154	Grasslands Soil	VKTVEAIKADWKWGTFIGFFLPLLAATVFADTSPVKTESQQNRTPTPAVLQSPASKQGLSFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRVVLDALLPRSSSPSATPNKKTDAVDLSYPWGRISCAYGKQDDRLTMRLE
Ga0134079_100122131	3300014166	Grasslands Soil	MKFLLALLAATAFADTGAEKTESQRNPTPIAAVRQSSAPKQGLNSVVGARGLDSLSFNGESLLVSLERGELQPQKSAFRTVLDAVLPLSSAGVATPNKRPDMIDLSYPWGRISCAYGKQDDRLTMRIEAFNTSSKAVNEFSVR*
Ga0163163_100678981	3300014325	Switchgrass Rhizosphere	VRHIAPRSSFIGFSLAFLAAAVFADTSPVKKESPANSTPTRVLQSPASKQGLNFVVGAHGLDSLSFNGQSLIGSPESGELQPQKSVFRTVLDALVPRSSPRIATPDKKADTVDVSYPSGRIFCAYGKQDDRLTMRLEVSNTSSNPLNELPL
Ga0157379_101948751	3300014968	Switchgrass Rhizosphere	VSHVARSLFISFFLVFLAGTVFANASSVKTGSQRNGTLTPALVQSPAANQGLSFSVGDHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPSATPTKNTDTVDLTYPWGHISCAYGKQGNRLKMRLEVSNTSSKPLNELSLR
Ga0173480_103440492	3300015200	Soil	LPRITPYSFFISFFLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGY
Ga0132258_113611071	3300015371	Arabidopsis Rhizosphere	LPHITPHSSFIGFLLAFLAATVFADTRLVKTESHQNRTPTATRLQSPASKQGLNFVIGAHGLDSLSFNGQSLLVSPESGELQPQKSRFRAVLDALVPRSSPRVAAPDKKADRVDVSYPWGRI
Ga0132256_1004334483	3300015372	Arabidopsis Rhizosphere	VPHIPPPSSVIGFFLAFLAATVFADTSPIEGELQQNRNPAPAALQSPPSKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPTPTPTKNTDTVELTYPWGRISCAYGKQDDRLTMRLEVSNTSSKPLNELSLRL
Ga0132256_1029688252	3300015372	Arabidopsis Rhizosphere	LPHITPHSLFIGFFLPFFAAAVSADTSPVKTEPQQNRTPTRAVLQAPASKQGLNFAVGAHGLDSLSFNGQSLLVSPESGDLQPEKSVFRAVLDALLPRSSSRAATPDKKADTVGLS*
Ga0184618_104435762	3300018071	Groundwater Sediment	MGPISLAFFAATVFANTSLVRPESQQTRNPTPAALQSPPSKQGLNFVVGAHGLDSLSFNGQSLLVSPERGELQPQKSVFRAVLDALVPRSSPRVATPDKKADTVDVSYPKGRISCAYGKQEDRLTMRLEVSNTSSEPVN
Ga0184624_100215601	3300018073	Groundwater Sediment	MTPRSSFVGFFLAFLVATVLAGVSSVKAESQPNPIPSPAVLQSPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSPPVATPDKKADTVELSYPRGRISCAYGK
Ga0066662_104232671	3300018468	Grasslands Soil	VPHIIVRSSFIGFSLALLAATVFTDTSPLKKESQRNRTPGPALLQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLDALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKITMKIEISNTS
Ga0066669_115509511	3300018482	Grasslands Soil	VPHIIVRSSFISFSLALLAATVFADTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKI
Ga0173479_100890121	3300019362	Soil	MDRSGNQNQRTNEGLIRMKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPEGGELQPQKSVFRAVLDALLPRSSARAATPDKKTDTIDLSYSWGRISCGYGKQGDRLTMRLEVSNTSS
Ga0137408_10303869	3300019789	Vadose Zone Soil	MKTVEAIKADWKWGTFIGFFLPLLAATVFADTSPVKTESQQNRTPTPAVLQSPASKQGLSFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALVPRSSSPSATPNKNTDTIDLSYPWGRIS
Ga0193732_10165581	3300020012	Soil	MGPIFVAFFAATVFADTSLLKTESQQNRTPTPAVLQSPASKQGLNFVVGAHGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALFPRSSSPSATPNKNTDTIDLSYPWGRISCAYGKQDDRLTMRLEVSNTSSEPLGEFSLR
Ga0193724_10572611	3300020062	Soil	LLNFSTLLISHITAQSSFIGFCLALLAATVLADSGAEKTELRRNLTSTASGRQSSASKQGLNFAVGERGLTSLSFNGQSLLVSRASGELQPQKSVFRAVLDAFLPRSSFQVATPNKTPDTVDIT
Ga0126371_122733591	3300021560	Tropical Forest Soil	MRSELAAVAGYQAHSSSIAFFLVLFSATAFAASSAVKIESQPDRTLTPSVVQSTAPKEHLNFVVGSRGLDSLSFNGETLLVSPERGELQPYKSAFRAVLDAVLPHSSAGVATPNKKPNTIDLSYPWGRVSGVYGKQADRLTLRIEVSNTSSKPVN
Ga0207707_103567671	3300025912	Corn Rhizosphere	MDRSGNQNQRTNEGLIRMKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGYSKQGDRLTMKLEVSNTSS
Ga0207693_104722541	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTPHSSFIGFFLAVLALAVLADTSPVETESQGTQTATLALVQSPASKQGLNFAVGERGLTSLSFNGQSLLVSPASGELQPEKSVFRAVLDAILPRSASQVATPKKKADTVDLSYPWGRVSCAYGKQGDRL
Ga0207657_102271511	3300025919	Corn Rhizosphere	VSHVARSSLINFFLALLAATVFADASPVKTESQQNGTLTPAVVQSPAANQGLRFSVGAHGLDSLSFNGQSLLVSSESGELQPAKSVFRAVLDALVPRPSPRMATRGQKADTVDLSYASGEISCAYGKQNDRL
Ga0207659_111292241	3300025926	Miscanthus Rhizosphere	MKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSYPWG
Ga0207687_110932301	3300025927	Miscanthus Rhizosphere	MKVMRPICLAFLAAAVLADTSPIKGELQHNRTPTPAVVQSPASKQGLNFVVGARGLDSLSFNGQSLLVSPESGELQPQKSVFRAVLDALLPRSSARVATPDKKTDTIDLSFPWGRISCGYSKQGDRLTMRLEVSNTSSEPVNEFSLRLM
Ga0207658_106466922	3300025986	Switchgrass Rhizosphere	VSHVARSLFISFFLVFLAATVFADASPVKTESQQNGTLTPAVVQSPAANQGLRFSVGAHGLDSLSFNGQSLLVSPESGELQQQKSVFRALVDALLPRSSSPTATPDKNTDTVDLTYPWGRISCAYGKQGNRLKMRL
Ga0209471_13138211	3300026318	Soil	VPHIIVRSSFISFSVALLAATVFADTSPLKKESQRNRTPGPALVQSPASKQGLNFVVGVHGLDSLSFNEQSLLSSPESGELRLQKSVFRAVLEALLPGSSSRAGTPNKKADTIHLSYPWGRISCSYGKEDDKITMKIEISNTSS
Ga0209058_11260151	3300026536	Soil	LPHITPHSSLIGFCLALLAATAFAGTSPVETVSQRNGTPTPAVVPSPAPKQGLNFVVGAYGLDSLSFDGQSFLLSPESGELQPQKSVFRAVFDALLPRSSSPSATPNKQADTIDLSYPWGRISCAYGKQ
Ga0137415_112376931	3300028536	Vadose Zone Soil	MVASANRSSDRFLSSLISFFLVLLAASVVADTSPVKAESQRNGAPAPAAFQSPAPKQGLNFVVGSRGLESLSFNGQSLLCSAQEGELQPQKSVFRAVLDALLPGPSSGVAMANMQPDTIDLSYRWGRISCAYGKQDNRITMRIEVSNTGPEPLNEF
Ga0307305_101832081	3300028807	Soil	MSFFLVLLAASIVADTSSVNTESQHNGASSPAVFQSPVPKQGLNFVVGVHGLDSLSFNEQSLLSSPESGEFRLQKSVFRAVLDALLPGSSSRAGTPNKKADTIDLSYPWGRISCSYGKED
Ga0170824_1049512561	3300031231	Forest Soil	MTFTRRFTGNSVKTVEAIKPDWKWGLFIGFFLALLAATVFADTSPVKGESQRDRTPTPAVLQSPAPEQGLHFVVGAHGLDSLSYNGQSILRSAQDGELQPWKSVFRAVLDALLSPSQSPVATPNKQADSIDLSYPW
Ga0170818_1001782511	3300031474	Forest Soil	MTFTRRFTGNSVKTVEAIKPDWKWGLFIGFFLALLAATVFADTSPVKGESQRDRTPTPAVLQSPAPEQGLHFVVGAHGLDSLSYNGQSILRSAQDGELQPWKSVFRAVLDALLSPSQSPVATPNKQADSIDLSYPWGRVSCAYGKQGDKLTMR
Ga0307469_109221523	3300031720	Hardwood Forest Soil	MVSSRSSDKLRNFFLAVLALAVFADTSAVETESQRTQTATLALVQSPASKQSLNFAVGERGLTSLSFNGQSLLVSPESGELQPQKSVFRAVLDALVPRSPTQVATPNKQTDTVDVSYPWG
Ga0307468_1004812983	3300031740	Hardwood Forest Soil	LIGQSEISSQTSAIGYQLSVIGYQFLAFLAATVFADTSPVKTEPQRDRTPTPAVVQSPASKQGLNFVVGAHGLESLSYNGESLLRSAQDGELQPQKSVFRAVLDALVPRSSPQVATPDKKADTVDLSYPWGRISCAYGKQDDRLTMRFEVSNTS
Ga0306921_126064781	3300031912	Soil	VIGYLLSALLAATVFADTRPAKAESQQNRTPTPAVLQSPASKQGLNFVVGADGLDSLSFNGQSLLVSPESGELRPQRSVFRAVLDALVPRSSPRVATPDKKADTVDLNYPWGRISCAYGKQKDRLTMRLEVS
Ga0307472_1001271993	3300032205	Hardwood Forest Soil	VTTGHHLPASCHRDGRIHWFFLALLAATVFADTSAVKTEPQRDRTPTPAVVQSPASKQGLNFVVGAHSLDSLSFDGQSLLRSAQDGELQPQKSVFRAVLDALVPRFSSPSAAPNKNTDTIDLSYPWGRISCAYGKQHDRLT
Ga0307472_1007093723	3300032205	Hardwood Forest Soil	MVSSRSSDKLRNFFVAVLALAVFADTSAVATESQRTQTATLALVQSPASKQSLNFAVGERGLTSLSFNGQSLLVSPESGELQPQKSVFRAVLDALVPRAQTQVATPNKQTDTVDVSYPWGRVSCAYGKQDDRLTLRIEVSNTSS
Ga0306920_1027083941	3300032261	Soil	MAAARANRSSDRLLSSLISFFLVLLAATVFADTSPVNRESHKHGVPTPAVFQSPTPKQGLSFVVGAYGLDSLSFNGQSLLASPDSGELRPHKSAFRAVLDALLPGSSSRVVTPDKPADTVDLSYSWGRVSCVYGKQDDRITMR
Ga0306920_1042516031	3300032261	Soil	VIGYQLSALLAATVFADTRPAKAESQQNRTPTPAVLQSPASKQGLNFVVGADGLDSLSFNGQSLLVSPESGELRPQRSVFRAVLDALVPRSSPRVATPDKKADTVDLNYPWGRISCA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088350

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign