NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F088357

Metagenome / Metatranscriptome Family F088357

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088357
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 125 residues
Representative Sequence MQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSVQGKERGGSPVLGGVDRVQYELRDGVAVTRLTKYITPATRRC
Number of Associated Samples 62
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 16.28 %
% of genes near scaffold ends (potentially truncated) 45.87 %
% of genes from short scaffolds (< 2000 bps) 59.63 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.560 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(44.954 % of family members)
Environment Ontology (ENVO) Unclassified
(41.284 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.872 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.48%    β-sheet: 21.82%    Coil/Unstructured: 49.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.122.1.0: automated matchesd6m37a_6m370.76174
d.122.1.3: Histidine kinased1th8a11th80.72795
d.122.1.3: Histidine kinased1id0a_1id00.60356
d.122.1.0: automated matchesd2e0aa22e0a0.58797
d.122.1.3: Histidine kinased1ysra_1ysr0.58752


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF04961FTCD_C 13.76
PF01571GCV_T 8.26
PF08669GCV_T_C 5.50
PF02347GDC-P 2.75
PF13581HATPase_c_2 1.83
PF14378PAP2_3 1.83
PF01597GCV_H 0.92
PF01979Amidohydro_1 0.92
PF00916Sulfate_transp 0.92
PF07969Amidohydro_3 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG3404Formiminotetrahydrofolate cyclodeaminaseAmino acid transport and metabolism [E] 13.76
COG0403Glycine cleavage system protein P (pyridoxal-binding), N-terminal domainAmino acid transport and metabolism [E] 2.75
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 2.75
COG0509Glycine cleavage system protein H (lipoate-binding)Amino acid transport and metabolism [E] 0.92
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.92
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.92
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.92


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms71.56 %
UnclassifiedrootN/A28.44 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100559878All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1020Open in IMG/M
3300002907|JGI25613J43889_10017317All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2016Open in IMG/M
3300002914|JGI25617J43924_10018032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2412Open in IMG/M
3300005542|Ga0070732_10200646All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1192Open in IMG/M
3300006954|Ga0079219_10225834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300007265|Ga0099794_10013161All Organisms → cellular organisms → Bacteria → Acidobacteria3594Open in IMG/M
3300007265|Ga0099794_10187708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1056Open in IMG/M
3300007788|Ga0099795_10102250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1126Open in IMG/M
3300007788|Ga0099795_10259735All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300009038|Ga0099829_10042019All Organisms → cellular organisms → Bacteria → Acidobacteria3336Open in IMG/M
3300009038|Ga0099829_10660903All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium869Open in IMG/M
3300009088|Ga0099830_10151677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1783Open in IMG/M
3300009088|Ga0099830_10254482All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300009088|Ga0099830_11673393Not Available531Open in IMG/M
3300009089|Ga0099828_12000791Not Available507Open in IMG/M
3300009143|Ga0099792_10234772Not Available1060Open in IMG/M
3300010159|Ga0099796_10091817All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300011269|Ga0137392_11211072All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300011271|Ga0137393_10202012All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1677Open in IMG/M
3300011271|Ga0137393_10905220All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300011271|Ga0137393_11041134All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300012189|Ga0137388_10155813All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2027Open in IMG/M
3300012202|Ga0137363_10894622All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300012205|Ga0137362_10009045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7172Open in IMG/M
3300012361|Ga0137360_10446531All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1095Open in IMG/M
3300012362|Ga0137361_11767455Not Available537Open in IMG/M
3300012917|Ga0137395_10080759All Organisms → cellular organisms → Bacteria2121Open in IMG/M
3300012917|Ga0137395_10829857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300012917|Ga0137395_11206288All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300012918|Ga0137396_10064424All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2548Open in IMG/M
3300012923|Ga0137359_10015330All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6452Open in IMG/M
3300012925|Ga0137419_10664093All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300012927|Ga0137416_10697489All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium892Open in IMG/M
3300012927|Ga0137416_11661093All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012927|Ga0137416_11802075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300015053|Ga0137405_1431777All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300015054|Ga0137420_1237099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1933Open in IMG/M
3300015054|Ga0137420_1246959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1976Open in IMG/M
3300020199|Ga0179592_10137367All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300020579|Ga0210407_10057310All Organisms → cellular organisms → Bacteria2913Open in IMG/M
3300020579|Ga0210407_10470625All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300020579|Ga0210407_10525349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium924Open in IMG/M
3300020579|Ga0210407_11355201All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300020580|Ga0210403_10030914All Organisms → cellular organisms → Bacteria → Acidobacteria4279Open in IMG/M
3300021046|Ga0215015_10777977All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium899Open in IMG/M
3300021086|Ga0179596_10477952All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300021170|Ga0210400_10037272All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3770Open in IMG/M
3300021171|Ga0210405_10003995All Organisms → cellular organisms → Bacteria → Acidobacteria14064Open in IMG/M
3300021171|Ga0210405_10862518All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300022504|Ga0242642_1008148All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1244Open in IMG/M
3300022506|Ga0242648_1039283All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300022533|Ga0242662_10293666All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300025906|Ga0207699_11453419Not Available507Open in IMG/M
3300026499|Ga0257181_1018203All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300026551|Ga0209648_10003142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13820Open in IMG/M
3300027070|Ga0208365_1018136All Organisms → cellular organisms → Bacteria → Acidobacteria898Open in IMG/M
3300027660|Ga0209736_1039497Not Available1373Open in IMG/M
3300027846|Ga0209180_10041353All Organisms → cellular organisms → Bacteria2517Open in IMG/M
3300027846|Ga0209180_10674541All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300027862|Ga0209701_10100724All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1805Open in IMG/M
3300027903|Ga0209488_10220569All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300028047|Ga0209526_10567964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300030991|Ga0073994_12205718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1260Open in IMG/M
3300030991|Ga0073994_12389743All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300031057|Ga0170834_105263536All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300031231|Ga0170824_117012791All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300031715|Ga0307476_10009737All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5963Open in IMG/M
3300031715|Ga0307476_10400153All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1014Open in IMG/M
3300031753|Ga0307477_10024511All Organisms → cellular organisms → Bacteria4120Open in IMG/M
3300031753|Ga0307477_10036515All Organisms → cellular organisms → Bacteria → Acidobacteria3372Open in IMG/M
3300031753|Ga0307477_10395409All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300031753|Ga0307477_10768837Not Available641Open in IMG/M
3300031754|Ga0307475_10076109All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2576Open in IMG/M
3300031754|Ga0307475_10173463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1719Open in IMG/M
3300031754|Ga0307475_11451987All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300031962|Ga0307479_10094782All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2897Open in IMG/M
3300031962|Ga0307479_12075489All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300032174|Ga0307470_10165519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1372Open in IMG/M
3300032174|Ga0307470_11174326Not Available622Open in IMG/M
3300032174|Ga0307470_11879845All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300032180|Ga0307471_100183997All Organisms → cellular organisms → Bacteria2065Open in IMG/M
3300032180|Ga0307471_100222898All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1911Open in IMG/M
3300032180|Ga0307471_100381066All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1531Open in IMG/M
3300032180|Ga0307471_101944178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300032205|Ga0307472_100114229All Organisms → cellular organisms → Bacteria → Acidobacteria1892Open in IMG/M
3300032205|Ga0307472_102599270All Organisms → cellular organisms → Bacteria516Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil44.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil22.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.50%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300022504Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027070Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10025569833300002245Forest SoilWQTAIVAACEEAFQHLTREHPRLDVTLTRLADRLEVALSREGEMAPAVGLATLAGLAPHGPHVEARQAGKSLVLGGVDRVQYETHNGVAVTRLTKFITPTTPRC*
JGIcombinedJ26739_10055987823300002245Forest SoilGLEGPAISNWQTAIVAACKEAFEHLTREHPRLNVTLTRLADRLEVALSFEGDTEPAVGLDALAGFAPGESDVQAQRSGKSPVLGGVDRVQYETRNGVAVTRLTKYIAPTTPRC*
JGI25613J43889_1001731733300002907Grasslands SoilARYFADAAGLEAPAIAEWQTAIVTVCKEAFEHLTREHPRLDVSFTRLTDRLEVALSREGDTSPAIGLDSHAGLAPQSGNPHEKRAGSSPVLGGVDRVQYETRNGVAVTRLTKYIAPTTPRC*
JGI25617J43924_1001646233300002914Grasslands SoilAVVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
JGI25617J43924_1001803233300002914Grasslands SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQEWQAGKSLVMEGVDRVQYETHGGVAITRLTKYITSAAPHY*
JGI25617J43924_1033439313300002914Grasslands SoilGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQEWQAGKSLVLGGVDRVQYETHGGVAITRLTKYITSAAPHY*
Ga0070732_1020064623300005542Surface SoilDAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC*
Ga0079219_1022583423300006954Agricultural SoilAAGLEGSALADWQTAIVAACKEAFEHLTRENPRLDVSFTWLTDRLEVALSREGDTSPAVGLDSLAGLGPRSGKPEESLHTNSPVLDGVDRVQYKTRDGIAVTRLTKYIAPTTPRC*
Ga0099794_1001316133300007265Vadose Zone SoilVTAEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMVDRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQEWQAGKSLVLGGVDRVQYETRGGVAVTRLTKYITSTAPHY*
Ga0099794_1018770813300007265Vadose Zone SoilLAAAAGGAARYFADAAGLEDHAIADWQTAIVAACKEAFEHLTREHPRLDVSFTRLTDRLEVALSREGDTSPAIGLDSLAGLAPQSGNPQGTAPGRSPVLGGVDRVQYETRDGFAVTRLTKYITPTTPRC*
Ga0099795_1010225023300007788Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0099795_1025973523300007788Vadose Zone SoilGLEAPAIAGWQIAIVAACKEAFAHLTREHPRLEVSFTRLADRLEVALSQEGESAPAVGFDSLIGSSPQSDDGSGKARSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0099829_1004201933300009038Vadose Zone SoilVATEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEDPAMTDWQTAIVAACNEAFEHLTSEHPRLDVTLTRLADRLEVALSREGDTSPAVGLDTLAGLVPQSGSAPGKAHGRSLVLGGVDRVQYETHSGVAVTRLTKYITPATRRC*
Ga0099829_1066090313300009038Vadose Zone SoilRYFADAAGLEAPAVVDWQTAIVAACTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPAARRC
Ga0099830_1015167713300009088Vadose Zone SoilRLAAAAGGAARYFADAAGLEGPAIADWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRLEVALSREGDPTPAVGLDTLAGLVPQSGSAPGKAHGRSPVLGGVDRVQYETHSGVAVTRLTKYITPATRRC*
Ga0099830_1025448233300009088Vadose Zone SoilVATEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEDPAMTDWQTAIVAACNEAFEHLTSEHPRLDVTLTRLADRLEVALSREGDTSPAVGLDTLAGLVPQSGSAPGKAHGRSLVLGGVDRVQYETHSGVAVTRLTKYITPATRR
Ga0099830_1167339313300009088Vadose Zone SoilAEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDLEPAVGLSSLAGLAPHDSDAQEWRAGKSLVLGGVDRVQYETRGGVAVTRLTKYITSAAPHY*
Ga0099828_1200079113300009089Vadose Zone SoilDAAGLEAPAVVDWQTAIVAACTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0099792_1023477233300009143Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKDGTAVTRL
Ga0099796_1009181713300010159Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIVDASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137392_1049122623300011269Vadose Zone SoilCTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPGTRRC*
Ga0137392_1121107223300011269Vadose Zone SoilWRTPVATEAKSIHMQIEADPRLAAAAGGAARYFADAAGLEDPAMTDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRLEVALSREGDTSPAVGLDTLAGLVPQSGSAPGKAHGRSLVLGGVDRVQYETHSGVAVTRLTKYITPATRRC*
Ga0137393_1020201223300011271Vadose Zone SoilVATEAKSIHMQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137393_1090522023300011271Vadose Zone SoilAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLVDRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137393_1104113413300011271Vadose Zone SoilAAGLEGPAITGWQTAVVAACKAAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137388_1011644913300012189Vadose Zone SoilIVAACNEAFEHLTREHPRLDVTLTRLTDRIEVTLSREGDLAPAVGLDTLAGLAPQSGTAPGKGHGHSLVMGGVDRVQYETHSGVAVTRLTKYITPAARRC*
Ga0137388_1015581323300012189Vadose Zone SoilVTAEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDLEPAVGLSSLAGLAPHDSDAQEWRAGKSLVLGGVDRVQYETRGGAAVTRLTKYITSAAPHY*
Ga0137388_1057179323300012189Vadose Zone SoilEHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137363_1016307533300012202Vadose Zone SoilVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137363_1089462223300012202Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137362_1000904553300012205Vadose Zone SoilMFPWRTLVATEAKSIHMQIEADARLAAAVGGAARYFADAAGLEDHAIADWQTAIVAACKEAFEHLTREHPRLDVSFTRLTDRLEVALSREGDTSPAIGLDSLAGLAPQSGNPQGTAPGRSPVLGGVDRVQYETRDGFAVTRLTKYITPTTPRC*
Ga0137362_1179450413300012205Vadose Zone SoilTAIVAACTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSAPRKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPAKPRR*
Ga0137360_1044653113300012361Vadose Zone SoilIAPSAKASTMCAWAVTDSITVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTPSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137360_1069940823300012361Vadose Zone SoilEAFEHLTREHPRLDVTLTRLADRIEAAFSREGDTTPALGLDTLAGLAPQSGSAPGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137361_1176745513300012362Vadose Zone SoilGAARYFADAAGLEAPAIVDWQTAIVAACTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPGTRRC*
Ga0137397_1118535913300012685Vadose Zone SoilAGLEAPAIAGWQTAIVAACKEAFAHLTREHPRLEVSFTRLADRLEVALSQEGESAPAVGFDSLIGSSPQSDDAPGKAPSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137395_1008075933300012917Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTPSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137395_1082985723300012917Vadose Zone SoilEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSATGRERGGSPVMGGVDRVQYEIRRGVAITRLTKYITRAAPRC*
Ga0137395_1120628823300012917Vadose Zone SoilYFADAAGIESEAIAHWQTAIVAACMEAFEHLTRDHPRLDVTLTRLADRIEVALSREGDAGPALGLDTLAGLVPQSGSAQRKERGGSLVLGGVDRVQYETRGGVAVTRLTKYITPATRRC*
Ga0137396_1006442433300012918Vadose Zone SoilVATEAKSIHMQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137359_1001533043300012923Vadose Zone SoilVTAEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMVDRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQEWQAGKSLVLGGVDRVQYETRGGVAVTRLTKYITSAAPHY*
Ga0137419_1066409313300012925Vadose Zone SoilLEAPAIAGWQTAIVAACKEAFAHLTREHPRLEVSFTRLADRLEVALSQEGESAPAVGFDSLIGSSPQSDDAAGKARSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC*
Ga0137416_1069748923300012927Vadose Zone SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVQACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKEGTAVTRLTKYIAPTTPHC*
Ga0137416_1166109313300012927Vadose Zone SoilIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGGATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITRAAPRC*
Ga0137416_1180207523300012927Vadose Zone SoilFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137405_143177713300015053Vadose Zone SoilIEADARLAAAAGGAARYFADAAGLEDHAIADWQTRHSRRLQRSVRAFDAGASRLDVSFTRLTDRLEVALSREGDTSPAIGLDSLAGLAPQSGNPQGTAPGRSPVLGGVDRVQYETRDGVAVTRLTKYIAPTTPCC*
Ga0137420_123709923300015054Vadose Zone SoilMQIEADPRLAAAAGGAARYFADAAGLETPAVVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLVDRIEVAFSREGDTTPALGLDTLAGLAPQSGGATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137420_124695933300015054Vadose Zone SoilVATEAKSIHMQIEADPRLAAAAGGAARYFADAAGLETPAVVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLVDRIEVAFSREGDTTPALGLDTLAGLAPQSGGATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC*
Ga0137418_1018843313300015241Vadose Zone SoilEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPATRRC*
Ga0179592_1013736723300020199Vadose Zone SoilMCAWAVTDSITVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0210407_1005731033300020579SoilMQIEADPRLAAAAGGAARYFADAAGLEGPAIADWQMAIVAACNEAFEHLTLEHPRLDVTLTRLADRLEVALSSEGATSPAVGLDTLAGLAPQSGTGPGEARGGSLVMGGVDRVQYETRSGVAVTRLTKYITPATRRC
Ga0210407_1047062523300020579SoilDAAGLLAPAIADWQTAIVAACIEAFEHLTREHPRLDVTLTRLADRIEVALSREGDAGPALGLDTLAGLVPQSGSAQGKERGGSLVLGGVDRVQYETRGGVAVTRLTKYITPATRRC
Ga0210407_1052534923300020579SoilIAGKPATFHWRTPVVTEAKGVQMQIEADPRLAAAAGGAARFFADAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGTAQGKGRGGSLVLGGVDRVQYDTLGGVAVTRLTKYITPDTRRC
Ga0210407_1109948813300020579SoilQVTLTWLADRIEVALSREGDTGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0210407_1135520113300020579SoilLAAAAGGAARFFADAAGLDAPAITYWQTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0210403_1003091423300020580SoilMQIEADPRLAAAAGGAARFFADAAGLEAPAITDWQTAIVAACNEAFERLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGIAVTRLTKFITPATRRC
Ga0215015_1077797713300021046SoilGAARYFADAAGLEAPAIADWQTAIVAACNEAFEHLTREHPRLDVTLTRLTDRIEVVLSREGDPAPAVGLDTLAGLAPQSATAPGKGHGPSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0179596_1047795213300021086Vadose Zone SoilMCAWAVTDSITVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTPSGSPVLRGV
Ga0210400_1003727223300021170SoilMRIEADPRLAAAAGGAARYFADAAGLEGSAMTDWQTAIVAACLEAFEHLTREHPRLDVTLTRMVDRLEVALSREDDLEPAVGLSSLAGLAPHDSDAQEWQAGKSLVLEGVDRVQYETRGGVAVTRLTKYITSTAPHY
Ga0210405_10003995123300021171SoilMQIEADVRLAAAAGGAARYLADAAGLEGPAISNWQTAIVAACKEAFEHLSLEHPKLKVTLTRLADRLEVALSFEGDTEPAVGLDALAGFAPGAPGVQAQRGGKSAVLGGVDRVQYETRNGVAVTRLTKYIAPPPRRS
Ga0210405_1086251813300021171SoilMCAWAQTVSTTVRIAGKPATFHWRTPVVTEAKGVQMQIEADPRLAAAAGGAARFFADAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLQVTLTWLTDRIEVALSREGDAGPALGLDTLAGLAPQHGTAQGKGRGGSLVLGGVDRVQYDTLGGVAV
Ga0210408_1084275423300021178SoilHPRLQVTLTWLADRIEVALSREGDTGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0242642_100814823300022504SoilARYFADAAGLEGAAISDWQTAIIAACKEAFEHLTRKHPRLDVTLSRLADRIEVALSCEGDTAPAVGLDTLAGFTPGDSEPEKKPSGKSSVLGGVDRVQYETRDGVAITRLTKYIAPTTPR
Ga0242648_103928313300022506SoilGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQEWQAGKSLVMGGVDRVQYETHDGVAVTRLTKYITSAAPHY
Ga0242662_1029366613300022533SoilMCAWAQTVSTTVRIAGKPATFHWRTPVVTEAKSVQMQIEADPRLAAAAGGAARFFADAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLQVTMTWLADRIEVALSREGDTGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTR
Ga0207699_1145341923300025906Corn, Switchgrass And Miscanthus RhizosphereACKEAFAQLTREHPRLNVSFTRLADRLEVALSREGDASPASGMDSLAGLPRSANVEATPHSDPPALGGVDSVQYETRDGIAVTRLTKYIAPTSPRR
Ga0257181_101820313300026499SoilMQIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMVDRLEVALSREDDPEPAVGLSSLAGLAPHDSDAQAWQAGKSLVLGGVDRVQYETRGGVAVTRLTKYITSTAPHY
Ga0209648_1000314273300026551Grasslands SoilMRIEADPRLAAAAGGAARYFADAAGLEGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDLEPAVGLSSLAGLAPHDSDAQEWQAGKSLVMEGVDRVQYETHGGVAVTRLTKYITSAAPRY
Ga0209648_1075934313300026551Grasslands SoilDVTLTRLTDRIEVTLSREGDLAPAVGLDTLARLAPQSGTAPGKGHGHSLVMGGVDRVQYETHSGVAVTRLTKYITPAARRC
Ga0179587_1083787113300026557Vadose Zone SoilMCAWAVTDSITVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTQ
Ga0208365_101813623300027070Forest SoilMQIEADPRLAAAAGGAARFFADAAGLEPRAITDWQTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQSGSVQGKERGGSPVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0209217_102082313300027651Forest SoilDWQTAIVAACEEAFQHLTREHPRLDVTLTRLADRLEVALSREGETAPAVGLAALAGLAPHGPHVEARQAGKSLVLGGVDRVQYETHNGVAVTRLTKFITPTTPRC
Ga0209736_103949723300027660Forest SoilMQIEADVRLAAAAGGAGRYLADAAGLEGPAISNWQTAIVAACKEAFEHLTRDHPRLNVTLTRLADRLEVALSREGESAPAVGLDSLAGLVPQSADAPDKARRGSPVLRGVDRVQYESRGGMAVTRLTKYIAPTTPRC
Ga0209009_108981713300027667Forest SoilTAIVAACNEAFEHLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0209580_1012342023300027842Surface SoilPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0209180_1004135323300027846Vadose Zone SoilMQIEADPRLAAAAGGAARYFADAAGLEDPAMTDWQTAIVAACNEAFEHLTSEHPRLDVTLTRLADRLEVALSREGDTSPAVGLDTLAGLVPQSGSAPGKAHGRSLVLGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0209180_1067454123300027846Vadose Zone SoilIVAACTEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSAPGKEHGGSLVLGGVDRVQYEIRGGVAVTRLTKYITPAARRC
Ga0209701_1010072433300027862Vadose Zone SoilWRTPVATEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEDPAMTDWQTAIVAACNEAFEHLTSEHPRLDVTLTRLADRLEVALSREGDTSPAVGLDTLAGLVPQSGSAPGKAHGRSLVLGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0209701_1011294033300027862Vadose Zone SoilWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTTPALGLDTLAGLAPQSGSATGRERGGSPVLGGVDRVQYEIRRGVAITRLTKYITPAAPRC
Ga0209488_1022056913300027903Vadose Zone SoilMCAWAVTDSITVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAISGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRIADASGKTPSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0209526_1056796423300028047Forest SoilLEGPAISNWQTAIVAACKDAFGHLSVEHPQLKVTLTRLADRLEVALSFEGDTEPAVGLDALAGFAPGESDVQAQRSGKSPVLGGVDRVQYETRNGVAVTRLTKYIAPTTPRC
Ga0073994_1220571813300030991SoilTVQIAGKPATFPWRTPVDAESKFVRMRIEADPRLAAAAGGAARYFADAAGLEGPAITGWQTAVVEACKEAFANLTREHPRLDVSFTRLADRLEVSLSQEGETAPAVGFDSLIGSAPRVADASGKTQSGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0073994_1238974313300030991SoilMQIEADPRLAAAVGGAARYFADAAGLEAPAIADWQMAIVAACEEAFEHLTQEHPRLDVSFIRLADRLEVALSREGETAPAVGLDSLAGLAPQSGDAPRKGRATSPVLGGVDRVQYETRDGIAVTRLTKYIAPTTPRC
Ga0170834_10526353613300031057Forest SoilMCAWAQTVSTTVRIAGKPATFHWRTPVATEAKSIQMQIEADPRLAAAAGGAARYFADVAGLEAPSITDWQTAIVAACNEAFEHLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGPGGSLVLGGVDRVQ
Ga0170824_11701279113300031231Forest SoilMQIEADPRLAAAAGGAARYFADVAGLEAPSITDWQTAIVAACNEAFEHLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGPGGSLVLGGVDRVQY
Ga0307476_1000973713300031715Hardwood Forest SoilMQIEADPRFAAAAGGAARYFADAAGLEPPVIESWQTAIVAACKEAFAHLTREHPRLDISFTRLVDRLEVALSREGEMAPALGLDSLTGLSLQSGDEPGNPRSGSPVMRGVDRVQYESKDGTAVTRLTKYIAPTTPRR
Ga0307476_1040015323300031715Hardwood Forest SoilMQIEADVRLAAAAGGAARYLADAAGLEGPAISNWQTAIVAACKEAFEHLSREHPKLKVTLTRLADRLEVALSFEGDTEPAVGLDALAGFAPGVPGVQAQRGGKSAVLGGVDRVQYETRNGVAVTRLTKYIAPPPRRS
Ga0307477_1000930353300031753Hardwood Forest SoilMAIVAACNEAFEHLTHEHPRLDVTLTRMADRLEVALSSEGATSPAVGLDTLAGLAPHSMSAPGKAHGGSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307477_1002451153300031753Hardwood Forest SoilMQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTLEHPRLDVTLTRLADRLEVALSSEGSTSPAVGLDTLAGLVPQTGTGLGKGHGGSLVMGGVDRVQYETHSGIAVTRLTKYITPATRRC
Ga0307477_1003651543300031753Hardwood Forest SoilVATEAKSIQMQIEADPRLAAAAGGAARYFADAAGLEGPAIVDWQAAIVAACNEAFEHLTREHPRLDVTLTRLADRVEVALSREGDTSPAVGLDTLAGLGPQSGNAPGKPHGGSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307477_1039540933300031753Hardwood Forest SoilMQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSVQGKERGGSPVLGGVDRVQYELRGG
Ga0307477_1076883723300031753Hardwood Forest SoilRFAAAAGGAARYFADAAGLEQPAIVGWQTAIVAACKEAFAHLTREHPRLDISFSRLADRLEVALSREGETEPALGLDSLTGLSRQAGDAPGSPRSGSPVMRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0307475_1007610943300031754Hardwood Forest SoilMCAWVPTVFTTARIAGKPATFRWRTLVDAESKSVRMQIEADPRFAAAAGGAARYFADAAGLEQPAIVGWQTAIVAACKEAFAHLTREHPRLDISFSRLADRLEVALSREGETEPALGLDSLTGLSRQAGDAPGSPRSGSPVMRGVDRVQYESKDGTAVTRLTKY
Ga0307475_1009671633300031754Hardwood Forest SoilVDWQAAIVAACNEAFEHLTREHPRLDVTLTRLADRVEVALSREGDTSPAVGLDTLAGLGPQSGNAPGKPHGRSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307475_1017346323300031754Hardwood Forest SoilMQIEADPRLAAAAGGAARYFADAAGLEAPAIVDWQTAIVAACNEAFEHLTREHPRLDVTLTRLADRIEVAFSREGDTAPALGLDTLAGLAPQSGSVQGKERGGSPVLGGVDRVQYELRDGVAVTRLTKYITPATRRC
Ga0307475_1145198723300031754Hardwood Forest SoilDAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGTAQGKGRGGSLVLGGVDRVQYDTLGGVAVTRLTKYITPDTRRC
Ga0307479_1009478223300031962Hardwood Forest SoilMQIEADPRFAAAAGGAARYFADAAGLEPPVIAGWQTAIVAACKEAFAHLTREHPRLDVRFTRLVDRLEVALSREGETAPALGLDSLTGLSPQSGDAPDSPRSGSPVMRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0307479_1066257413300031962Hardwood Forest SoilTLTRLADRLEVALSREGDMAPAVGLDTLAGLAPHGSDVPGRRPGSSSVLGGVDRVQYETQGGVAVTRLTKYITPTAPRC
Ga0307479_1207548913300031962Hardwood Forest SoilYFADAAGLEGPAIVDWQAAIVAACNEAFEHLTREHPRLDVTLTRLADRVEVALSREGDTSPAVGLDTLAGLGPQSGNAPGKPHGGSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307470_1016551933300032174Hardwood Forest SoilMQIEADPRLAAAAGGAARYFADAAGLDGPAITDWQTAIVAACLEAFEHLTREHPRLDVTLTRMADRLEVALSREDDPQPAVGLSSLAGLAPHDSDAQEWQAGKSLVLEGVDRVQYETHGGVAVTRLTKYITSTAPHY
Ga0307470_1117432613300032174Hardwood Forest SoilADAAGLEGLAIAGWQTAVVAACKEAFAHLTREHPRLDVSFTRLADRLEVALSREGETAPAVGFDSLIGSSPQSDDASGKARGGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPRC
Ga0307470_1187984513300032174Hardwood Forest SoilAAGLEGSAIAEWQTAIVAACKEAFEHLTREHPRLDVSFTRLSDRLEVALSREGDTSPAIGLDSLAGLAPQSGSPRGTAPRSPVLGGVDRVQYETRDGVAVTRLTKYIASTTPRY
Ga0307471_10018399733300032180Hardwood Forest SoilMQIEADSRLAAAAGGAARYFADAAGLEGPAIADWQMAIVAACNEAFEHLTLEHPRLDVTLTRLADRLEVALSSEGATSPAVGLDTLAGLAPQSGTGPGEARGGSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307471_10022289833300032180Hardwood Forest SoilYFADAAGLEGPAIADWQMAIVAACNEAFEHLTLEHPRLDVTLTRLADRLEVALSSEGATSPAVGLDTLAGLAPESGTGPGEARGGSLVMGGVDRVQYETRSGVAVTRLTKYITPATRRC
Ga0307471_10038106613300032180Hardwood Forest SoilMCAWAQTVSTTVRIAGKPATFHWRTPVVTEAKGVQMQIEADPRLAAAAGGAARFFADAAGLEAPAITDWQTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGTAQGKGRGGSLVLGGVDRVQYDTLGGVAVTRLTKYITPDTRRC
Ga0307471_10194417823300032180Hardwood Forest SoilARYCADAAGLEGLALAGWQTAVVAACKEAFAHLTREHPRLDVSFTRLADRLEVALSREGETAPAVGFDSLIGSSPQSDDASGKARGGSPVLRGVDRVQYESKDGTAVTRLTKYIAPTTPR
Ga0307471_10220078923300032180Hardwood Forest SoilTDWQMAIVAACNEAFERLTREHPRLEVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGSAQGKGRGGSLVLGGVDRVQYDTRGGVAVTRLTKYITPATRRC
Ga0307472_10011422923300032205Hardwood Forest SoilMQIEADPRLAAAAGGAARYFADAAGLEVPAITDWQTAVVAACNEAFEHLTRDHPRLQVTLARMTDRLEVALSREGDPSPAVGLDMLAGLVQQSGSAPGKAYGGSLVMGGVDRVQYETHSGVAVTRLTKYITPATRRC
Ga0307472_10259927013300032205Hardwood Forest SoilTAIVAACNEAFEHLTREHPRLQVTLTWLADRIEVALSREGDAGPALGLDTLAGLAPQHGTAQGKGRGGSLVLGGVDRVQYDTLGGVAVTRLTKYITPDTRRC


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.