Metagenome / Metatranscriptome Family F088377

Basic Information
Family ID	F088377
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	48 residues
Representative Sequence	QGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Number of Associated Samples	79
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	92.66 %
% of genes from short scaffolds (< 2000 bps)	90.83 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Unclassified (74.312 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.450 % of family members)
Environment Ontology (ENVO)	Unclassified (53.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.294 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 45.21% Coil/Unstructured: 54.79%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02604	PhdYeFM_antitox	1.83
PF01212	Beta_elim_lyase	1.83
PF03734	YkuD	1.83
PF05015	HigB-like_toxin	0.92
PF01259	SAICAR_synt	0.92
PF00535	Glycos_transf_2	0.92
PF00239	Resolvase	0.92
PF01501	Glyco_transf_8	0.92
PF04392	ABC_sub_bind	0.92
PF07045	DUF1330	0.92
PF00982	Glyco_transf_20	0.92
PF06904	Extensin-like_C	0.92
PF01757	Acyl_transf_3	0.92
PF02826	2-Hacid_dh_C	0.92
PF12686	DUF3800	0.92
PF02517	Rce1-like	0.92
PF02357	NusG	0.92
PF09361	Phasin_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	3.67
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	1.83
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.83
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	1.83
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	1.83
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.83
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.83
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.83
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.83
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	1.83
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.83
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	1.83
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	1.83
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	1.83
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.83
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.83
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	1.83
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.83
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.83
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	1.83
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.92
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.92
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.92
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1442	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.92
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.92
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.92
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	0.92
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.92
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.92
COG5597	N-acetylglucosaminyl transferase	Cell wall/membrane/envelope biogenesis [M]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
All Organisms	root	All Organisms	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
cellular organisms	root	All Organisms → cellular organisms	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.60 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.01 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100381227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2056	Open in IMG/M
3300005332\|Ga0066388_107996943	Not Available	529	Open in IMG/M
3300005764\|Ga0066903_100551251	Not Available	1977	Open in IMG/M
3300005764\|Ga0066903_100621335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1879	Open in IMG/M
3300005764\|Ga0066903_101902877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1139	Open in IMG/M
3300005764\|Ga0066903_103205551	Not Available	885	Open in IMG/M
3300005764\|Ga0066903_103999337	Not Available	790	Open in IMG/M
3300005764\|Ga0066903_106070329	Not Available	632	Open in IMG/M
3300005764\|Ga0066903_106435475	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005764\|Ga0066903_106858691	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005764\|Ga0066903_109032836	Not Available	504	Open in IMG/M
3300005937\|Ga0081455_10378158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	990	Open in IMG/M
3300006047\|Ga0075024_100335191	Not Available	751	Open in IMG/M
3300006059\|Ga0075017_100786640	Not Available	735	Open in IMG/M
3300006904\|Ga0075424_102009914	Not Available	610	Open in IMG/M
3300009098\|Ga0105245_12334279	Not Available	588	Open in IMG/M
3300010043\|Ga0126380_11956264	Not Available	535	Open in IMG/M
3300010359\|Ga0126376_12994495	Not Available	522	Open in IMG/M
3300010360\|Ga0126372_10002828	All Organisms → cellular organisms → Bacteria	7740	Open in IMG/M
3300010366\|Ga0126379_11114516	Not Available	895	Open in IMG/M
3300010376\|Ga0126381_100510626	Not Available	1697	Open in IMG/M
3300012202\|Ga0137363_10777635	Not Available	812	Open in IMG/M
3300014968\|Ga0157379_10766522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300016270\|Ga0182036_11200384	Not Available	631	Open in IMG/M
3300016270\|Ga0182036_11660847	Not Available	539	Open in IMG/M
3300016294\|Ga0182041_11266878	Not Available	674	Open in IMG/M
3300016319\|Ga0182033_10009477	All Organisms → cellular organisms → Bacteria	5416	Open in IMG/M
3300016341\|Ga0182035_11654927	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300016371\|Ga0182034_10539613	Not Available	978	Open in IMG/M
3300016371\|Ga0182034_10857654	Not Available	779	Open in IMG/M
3300016371\|Ga0182034_12005418	Not Available	511	Open in IMG/M
3300016387\|Ga0182040_11431579	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300016387\|Ga0182040_11909135	Not Available	509	Open in IMG/M
3300016404\|Ga0182037_11785862	Not Available	549	Open in IMG/M
3300016422\|Ga0182039_12214939	Not Available	507	Open in IMG/M
3300016445\|Ga0182038_11517576	Not Available	602	Open in IMG/M
3300016445\|Ga0182038_11756457	Not Available	559	Open in IMG/M
3300017822\|Ga0187802_10237640	Not Available	704	Open in IMG/M
3300017822\|Ga0187802_10317364	Not Available	609	Open in IMG/M
3300017928\|Ga0187806_1143834	Not Available	784	Open in IMG/M
3300017994\|Ga0187822_10031104	Not Available	1421	Open in IMG/M
3300018060\|Ga0187765_11025274	Not Available	568	Open in IMG/M
3300020002\|Ga0193730_1045205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1274	Open in IMG/M
3300021168\|Ga0210406_10935428	Not Available	650	Open in IMG/M
3300021171\|Ga0210405_10231819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1462	Open in IMG/M
3300021178\|Ga0210408_10265921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1367	Open in IMG/M
3300021401\|Ga0210393_11278868	Not Available	589	Open in IMG/M
3300021405\|Ga0210387_10520763	Not Available	1057	Open in IMG/M
3300021474\|Ga0210390_10148604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1973	Open in IMG/M
3300021560\|Ga0126371_13123592	Not Available	560	Open in IMG/M
3300022501\|Ga0242645_1004224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300022523\|Ga0242663_1013811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300022528\|Ga0242669_1015641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1043	Open in IMG/M
3300022531\|Ga0242660_1018653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300022694\|Ga0222623_10178790	Not Available	825	Open in IMG/M
3300022715\|Ga0242678_1008747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300027880\|Ga0209481_10082657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1533	Open in IMG/M
3300027911\|Ga0209698_10943194	Not Available	645	Open in IMG/M
3300031231\|Ga0170824_100244579	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300031231\|Ga0170824_127272603	Not Available	1588	Open in IMG/M
3300031573\|Ga0310915_10859842	Not Available	636	Open in IMG/M
3300031668\|Ga0318542_10362774	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031679\|Ga0318561_10747332	Not Available	537	Open in IMG/M
3300031680\|Ga0318574_10933090	Not Available	508	Open in IMG/M
3300031723\|Ga0318493_10386300	Not Available	765	Open in IMG/M
3300031736\|Ga0318501_10854038	Not Available	506	Open in IMG/M
3300031751\|Ga0318494_10280809	Not Available	958	Open in IMG/M
3300031771\|Ga0318546_11011280	Not Available	585	Open in IMG/M
3300031819\|Ga0318568_10654115	Not Available	654	Open in IMG/M
3300031823\|Ga0307478_10118018	All Organisms → cellular organisms → Bacteria → Proteobacteria	2076	Open in IMG/M
3300031833\|Ga0310917_10511667	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300031833\|Ga0310917_10524133	Not Available	806	Open in IMG/M
3300031833\|Ga0310917_10535078	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300031835\|Ga0318517_10489949	Not Available	554	Open in IMG/M
3300031897\|Ga0318520_10452760	Not Available	789	Open in IMG/M
3300031910\|Ga0306923_10448953	Not Available	1463	Open in IMG/M
3300031910\|Ga0306923_10666466	Not Available	1161	Open in IMG/M
3300031910\|Ga0306923_12233276	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031912\|Ga0306921_11264321	Not Available	818	Open in IMG/M
3300031912\|Ga0306921_12496231	Not Available	536	Open in IMG/M
3300031941\|Ga0310912_10316972	Not Available	1208	Open in IMG/M
3300031942\|Ga0310916_10935469	Not Available	725	Open in IMG/M
3300031945\|Ga0310913_10393841	Not Available	982	Open in IMG/M
3300031945\|Ga0310913_10508993	Not Available	855	Open in IMG/M
3300031947\|Ga0310909_11427184	Not Available	553	Open in IMG/M
3300031954\|Ga0306926_10536034	Not Available	1435	Open in IMG/M
3300031954\|Ga0306926_12552762	Not Available	559	Open in IMG/M
3300032001\|Ga0306922_11571328	Not Available	655	Open in IMG/M
3300032010\|Ga0318569_10465323	Not Available	590	Open in IMG/M
3300032052\|Ga0318506_10201692	Not Available	878	Open in IMG/M
3300032059\|Ga0318533_10229876	Not Available	1335	Open in IMG/M
3300032059\|Ga0318533_10370673	Not Available	1044	Open in IMG/M
3300032059\|Ga0318533_10606741	Not Available	803	Open in IMG/M
3300032059\|Ga0318533_10621740	Not Available	792	Open in IMG/M
3300032059\|Ga0318533_11391303	Not Available	512	Open in IMG/M
3300032063\|Ga0318504_10499182	Not Available	583	Open in IMG/M
3300032066\|Ga0318514_10601534	Not Available	585	Open in IMG/M
3300032067\|Ga0318524_10753750	Not Available	514	Open in IMG/M
3300032076\|Ga0306924_11631404	Not Available	678	Open in IMG/M
3300032076\|Ga0306924_12026607	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032091\|Ga0318577_10269921	Not Available	814	Open in IMG/M
3300032261\|Ga0306920_103599866	Not Available	571	Open in IMG/M
3300033289\|Ga0310914_10822815	Not Available	827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.50%
Host-Associated	Host-Associated	5.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.16%
Aquatic	Environmental → Aquatic	7.34%
Plants	Host-Associated → Plants	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.16%
Freshwater	Environmental → Aquatic → Freshwater	3.67%
Sediment	Environmental → Aquatic → Sediment	3.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.15%
Loam	Environmental → Terrestrial → Soil → Loam	10.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1003812275	3300005332	Tropical Forest Soil	KLPPITALKIERSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTIVQPMGMR*
Ga0066388_1079969432	3300005332	Tropical Forest Soil	NLSNVKVEIDVSVAGQSSTYVFNCVRQGQLVVVQPMGMR*
Ga0066903_1005512513	3300005764	Tropical Forest Soil	QGQRNSKPYHVTVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR*
Ga0066903_1006213353	3300005764	Tropical Forest Soil	NVKVEIDVNVAGQSSTYVFNCVRQGQLVVVQPMGMR*
Ga0066903_1019028771	3300005764	Tropical Forest Soil	RNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR*
Ga0066903_1032055512	3300005764	Tropical Forest Soil	VAGQERHKQDLYHVKVEIDVSVAGQTSTYIFNCIRSGNLTVIQPLGMR*
Ga0066903_1039993372	3300005764	Tropical Forest Soil	NLSNVKVEIDVNVAGQSSTYVFNCVRQGQLVVVQPMGMR*
Ga0066903_1060703291	3300005764	Tropical Forest Soil	LSNVKVEIDVSVAGQSSTYVFNCVRSGTLTVIEPIGLR*
Ga0066903_1064354751	3300005764	Tropical Forest Soil	DPYHVKVEIDASVAGQTSTYIFNCIHSGAFTVIQPLGMR*
Ga0066903_1068586912	3300005764	Tropical Forest Soil	PSAQGPRNSKLYHVKVEIDATVAGQTSTYVFNCIRDGQMTIVQPMGMR*
Ga0066903_1090328362	3300005764	Tropical Forest Soil	RNSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTIVQPIGMR*
Ga0081455_103781581	3300005937	Tabebuia Heterophylla Rhizosphere	GDPNISNVKVEIDVNVAGQNSTYVFNCVRQGQLMVVQPLGMR*
Ga0075024_1003351913	3300006047	Watersheds	KVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR*
Ga0075017_1007866401	3300006059	Watersheds	VGQPSPQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR*
Ga0075424_1020099141	3300006904	Populus Rhizosphere	SKLSNVKVEIDVSVAGQGSTYVFNCIRDDTLTVIQPLGIR*
Ga0066710_1002810845	3300009012	Grasslands Soil	LEQPQSQGRPKWNVYSVKVEIDVSVAGQRSTYVFNCVHGGQATVIQPLGMR
Ga0105245_123342792	3300009098	Miscanthus Rhizosphere	LSNVKVEIDVNVAGQSSTYVFNCVRQGQLVVVQPMGMR*
Ga0126380_119562642	3300010043	Tropical Forest Soil	VTALKIERSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTIVQPIGMR*
Ga0126370_104577993	3300010358	Tropical Forest Soil	LKIEQSQVVPQPAAQKERNSEVYHVKVEIDVSVAGQTSTYVYNCIREGPFTVIQPLGMR*
Ga0126376_129944951	3300010359	Tropical Forest Soil	QPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR*
Ga0126372_100028281	3300010360	Tropical Forest Soil	LKIEGSRVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTIVQPIGMR*
Ga0126379_111145161	3300010366	Tropical Forest Soil	NLSNVKVEIDVSVAGQSSTYVFNCVRQGQLVVVQPIGLR*
Ga0126381_1005106261	3300010376	Tropical Forest Soil	AAAAKLPPVTALKIEGSRVVAQPSAQGQRNSKLYHVRVEIDASVAGQTSTYLFNCVRDGQLTVIQPVGMR*
Ga0137363_107776351	3300012202	Vadose Zone Soil	NPKLYHVRVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR*
Ga0137376_103485832	3300012208	Vadose Zone Soil	YHVIVEIDVSVAGQSSTYIFNYVRHGQLTVIQPMGMR*
Ga0157379_107665221	3300014968	Switchgrass Rhizosphere	NVKVEIDVNLAGQSSTYVFNCVRQGQLVVVQPMGMR*
Ga0132255_1030852871	3300015374	Arabidopsis Rhizosphere	PQPQQSRRRHDVYRITVEIDVSVAGQSSTYVFNCVRDGQLTVIQPLGMR*
Ga0182036_112003841	3300016270	Soil	RSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTIVQPMGMR
Ga0182036_116608471	3300016270	Soil	RSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDDQLTIVQPMGMR
Ga0182036_117162641	3300016270	Soil	KIEESRVVPQPQAQGRHKQDVYHVKVEIDVSVAGQTSTYLFNCVRDGELTVIQPIGMR
Ga0182041_112668781	3300016294	Soil	VVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0182033_100094779	3300016319	Soil	TLKIEQSRVVGQPSPQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0182035_116549272	3300016341	Soil	RNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR
Ga0182034_105396131	3300016371	Soil	KNSKLYHVTVEFDTSLAGQTSTYVFNCIREGSATIIQPLDMR
Ga0182034_108576541	3300016371	Soil	ERSRVMPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR
Ga0182034_120054182	3300016371	Soil	VKVEIDASVAGQTSTYVFNCIRDGQLTIVQPMGMR
Ga0182040_114315791	3300016387	Soil	KLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0182040_119091351	3300016387	Soil	RNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0182037_117858622	3300016404	Soil	SRVVPPASGQGQHNSKLYHVRVEIDATVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0182039_122149392	3300016422	Soil	IEQSRVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTVIQPVGMR
Ga0182038_115175762	3300016445	Soil	AAAKLPPVATLKIEQSRVVGQPSPQEQRSSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTVIQPVGMR
Ga0182038_117564572	3300016445	Soil	QGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0187802_102376401	3300017822	Freshwater Sediment	LKIEGSRVVSQPMAQEQRNSKLYHVRVEIDVSVAAQTSTYLYNCVRDGQLTVIQPLGMR
Ga0187802_103173641	3300017822	Freshwater Sediment	IHRVTVEIDVSVAGQSSTYLFNCVRDGQVTVIQPLGMR
Ga0187806_11438342	3300017928	Freshwater Sediment	RHERDLYHVKVEIDVSVAGQTSTYIFNCIQSGELTVIQPLGMR
Ga0187822_100311041	3300017994	Freshwater Sediment	HERDLYHVKVEIDVSVAGQTSTYIFNCIQSGELTVIQPLGMR
Ga0187765_110252741	3300018060	Tropical Peatland	AAAKLPSVAAQKIEGSRVVSQDPAQGQRSSKLYHVRVEIDVTVAGQTSTYVYNCVRDGQLTAIQPLGMR
Ga0193730_10452051	3300020002	Soil	DPNVSNVRVEIDISVAGSTYVFNCIRQGQLVVVQPMGMR
Ga0210406_109354281	3300021168	Soil	AKLPPVAALKIEQSRVVGQPSPQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTIVQPVGMR
Ga0210405_102318191	3300021171	Soil	KQSEGLRPGIYHVTVETDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0210408_102659211	3300021178	Soil	YHVTVETDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0210393_112788681	3300021401	Soil	YRVTVEIDVSVAGQNSTYVFNCVRDGQLTVIQPLGMR
Ga0210387_105207634	3300021405	Soil	RPGVYRVTVEIDVSVAGQSSTYIFNCVRDGQVTVIQPLGMR
Ga0210390_101486041	3300021474	Soil	PQPQQPRPGVYRVTVEIDVSVAGQSSTYIFNCVRDGQVTVIQPLGMR
Ga0126371_131235922	3300021560	Tropical Forest Soil	KLPPVTALKIEGSRVVAQPSAQGQRNSKLYHVRVEIDASVAGQTSTYLFNCVRDGQLTVIQPVGMR
Ga0242645_10042241	3300022501	Soil	VTVEIDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0242663_10138112	3300022523	Soil	YRVTVEIDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0242669_10156411	3300022528	Soil	RVTVEIDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0242660_10186531	3300022531	Soil	RNSDVYRVTVEIDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0222623_101787902	3300022694	Groundwater Sediment	DPTVSNVKVEIDVSVAGQSSTYVFNCVRQGQLVVVQPMGMR
Ga0242678_10087472	3300022715	Soil	SDVYRVTVEIDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0209481_100826572	3300027880	Populus Rhizosphere	VYRIKLEIDVSVAGQRSTYLFNCIQSGQATLVQPLGMR
Ga0209698_109431941	3300027911	Watersheds	RVTVEIDVSVAGQSSTYVFNCVRDGQLTVIQPLGMR
Ga0170824_1002445791	3300031231	Forest Soil	YRVTVEIDVSVAGQTSTYVFNCVLDGQVTVIQPQGMR
Ga0170824_1272726034	3300031231	Forest Soil	AATKIEGSRVVAQPSAQAQRNSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTVIQPVGM
Ga0310915_108598421	3300031573	Soil	EASRVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318542_103627742	3300031668	Soil	IERSRVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0318561_107473321	3300031679	Soil	LKIEQSRVVGQPSPQGQRDSKLYHVKVEIDASVAGQTSTYVFNCVRDGQLTVIQPIGMR
Ga0318574_109330902	3300031680	Soil	KLPPVTTLKVEGSRVVAQPSAQGQRNSKLYHVRVEIDVSVAGQTSTYLFNCIRDGQLTVVQPMGMR
Ga0318493_103863003	3300031723	Soil	QGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318501_108540382	3300031736	Soil	KPYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318494_102808093	3300031751	Soil	IEASRVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318546_110112801	3300031771	Soil	SSKPYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318568_106541151	3300031819	Soil	PSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDDQLTIVQPMGMR
Ga0307478_101180183	3300031823	Hardwood Forest Soil	FGSKQSQGLRPGIYHVTVETDVSVAGQSSTYVFNCVRDGQVTVIQPLGMR
Ga0310917_105116673	3300031833	Soil	AQGQRNSKLHHVKVEIDATVAGQTSTYVFNCVRDGQMTIVQPMGMR
Ga0310917_105241331	3300031833	Soil	RVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR
Ga0310917_105350781	3300031833	Soil	RPGVYRVTVEIDVSVAGQSSTYVFNCVRDGLVTVIQPLGMR
Ga0318517_104899491	3300031835	Soil	AKLPPVAALKIEQSRVVGQPSPQEQRSSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318520_104527601	3300031897	Soil	SRVVGQPSPQGQRSSKPYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0306923_104489533	3300031910	Soil	RHEQDLYHVKVEIDVSVAGQTSTYIFNCIHSGALTVIQPLGMR
Ga0306923_106664661	3300031910	Soil	ERSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDDQLTIVQPMGMR
Ga0306923_122332761	3300031910	Soil	SKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0306921_112643212	3300031912	Soil	ALKIERSRVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR
Ga0306921_124962312	3300031912	Soil	SVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDDQLTIVQPMGMR
Ga0310912_103169721	3300031941	Soil	PQGQRSSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0310916_109020781	3300031942	Soil	VVPQPSAQKERNSELYHVKVEIDVSVAGQTSTYVYNCIRDGKITVIQPLGMR
Ga0310916_109354693	3300031942	Soil	QPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0310913_103938411	3300031945	Soil	RVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0310913_105089932	3300031945	Soil	NSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTVIQPLGMR
Ga0310909_114271841	3300031947	Soil	ITAAAAKLPPVTALKIEGSRVVAQPSAQGPRNSKLYHVKVEIDATVAGQTSTYVFNCIRDGQMTIVQPMGMR
Ga0306926_105360343	3300031954	Soil	SRVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLTLIQPLGMR
Ga0306926_125527622	3300031954	Soil	LPPVRALKIGRSRVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLMVIQPLGMR
Ga0306922_115713281	3300032001	Soil	RVVPDPSAKNSKLYHVTVEFDTSLAGQTSTYVFNCIREGSATIIQPLDMR
Ga0318569_104653231	3300032010	Soil	GQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTIVQPMGMR
Ga0318506_102016922	3300032052	Soil	KLPPVATLKIEQSRVVGQPSPQGQRSSKPYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0318533_102298763	3300032059	Soil	PDTSAKNSKLYHVTVEFDTSLAGQTSTYVFNCIREGSATIIQPLDMR
Ga0318533_103706731	3300032059	Soil	LYHVRVEIDVSVAGQTSTYLFNCIRDGQLTVVQPMGMR
Ga0318533_106067412	3300032059	Soil	VQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDDQLTIVQPMGMR
Ga0318533_106217401	3300032059	Soil	TALKIERSRVVAQPSVQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTIVQPMGM
Ga0318533_113913032	3300032059	Soil	AQGRHEQDVYHVKVEIDVSVAGQTSTYIFNCIHSGALTVIQPLGMR
Ga0318504_104991821	3300032063	Soil	VRVEIDASVAGQTSTYVFNCVRDGQLTIVQPMGMR
Ga0318514_106015342	3300032066	Soil	PSAQGQRNSKLYHVRVEIDASVAGQTSTYVFNCVRDGQLTVIQPVGMR
Ga0318524_107537501	3300032067	Soil	SKQYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0306924_116314041	3300032076	Soil	NSKQYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0306924_120266072	3300032076	Soil	ALKIERSRVVPQPHTQGQRNSKLYHVKVEIDASVAGQTSTYVYNCIRDGQLMVIQPLGMR
Ga0318577_102699212	3300032091	Soil	GSRVVAQPSAQGQRNSKLYHVKVEIDASVAGQTSTYVFNCIRDGQLTVIQPVGMR
Ga0306920_1035998661	3300032261	Soil	AQGRHEQDVYHVKVEIDVSVAGQTSTYIFNCIHSGAVTVIQPLGMR
Ga0310914_108228151	3300033289	Soil	SAKNSKLYHVTVEFDTSLAGQTSTYVFNCIREGSATIIQPLDMR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088377

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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