Metagenome Family F088397

Basic Information
Family ID	F088397
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	41 residues
Representative Sequence	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEVHAAV
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.64 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (77.982 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.294 % of family members)
Environment Ontology (ENVO)	Unclassified (55.046 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.624 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01828	Peptidase_A4	5.50
PF13828	DUF4190	2.75
PF03007	WES_acyltransf	2.75
PF12697	Abhydrolase_6	2.75
PF12802	MarR_2	0.92
PF00571	CBS	0.92
PF11611	DUF4352	0.92
PF00578	AhpC-TSA	0.92
PF00535	Glycos_transf_2	0.92
PF00128	Alpha-amylase	0.92
PF07350	DUF1479	0.92
PF07676	PD40	0.92
PF11716	MDMPI_N	0.92
PF02738	MoCoBD_1	0.92
PF08241	Methyltransf_11	0.92
PF13404	HTH_AsnC-type	0.92
PF07690	MFS_1	0.92
PF13669	Glyoxalase_4	0.92
PF03466	LysR_substrate	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4908	Uncharacterized conserved protein, contains a NRPS condensation (elongation) domain	General function prediction only [R]	2.75
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.92
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.92
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.92
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
All Organisms	root	All Organisms	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
cellular organisms	root	All Organisms → cellular organisms	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.34 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig04283	Not Available	1541	Open in IMG/M
2170459005\|F1BAP7Q01AKBL7	Not Available	547	Open in IMG/M
3300005332\|Ga0066388_103852514	Not Available	765	Open in IMG/M
3300005335\|Ga0070666_10180582	Not Available	1480	Open in IMG/M
3300005545\|Ga0070695_101521301	Not Available	557	Open in IMG/M
3300005764\|Ga0066903_105470664	Not Available	670	Open in IMG/M
3300006881\|Ga0068865_101073947	Not Available	708	Open in IMG/M
3300009137\|Ga0066709_103874631	Not Available	543	Open in IMG/M
3300009683\|Ga0116224_10195296	Not Available	970	Open in IMG/M
3300009698\|Ga0116216_10143276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1469	Open in IMG/M
3300009698\|Ga0116216_10176908	Not Available	1310	Open in IMG/M
3300010366\|Ga0126379_10111554	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2460	Open in IMG/M
3300010366\|Ga0126379_13396401	Not Available	533	Open in IMG/M
3300010379\|Ga0136449_100998518	Not Available	1347	Open in IMG/M
3300012476\|Ga0157344_1028269	Not Available	524	Open in IMG/M
3300012955\|Ga0164298_10997921	Not Available	618	Open in IMG/M
3300012971\|Ga0126369_12834271	Not Available	568	Open in IMG/M
3300013102\|Ga0157371_11463989	Not Available	532	Open in IMG/M
3300015371\|Ga0132258_11401820	All Organisms → cellular organisms → Bacteria → Proteobacteria	1765	Open in IMG/M
3300015374\|Ga0132255_100313882	Not Available	2260	Open in IMG/M
3300016270\|Ga0182036_11118798	Not Available	653	Open in IMG/M
3300016319\|Ga0182033_10673802	Not Available	904	Open in IMG/M
3300016319\|Ga0182033_10945844	Not Available	765	Open in IMG/M
3300016341\|Ga0182035_10384872	Not Available	1175	Open in IMG/M
3300016387\|Ga0182040_10410729	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300017928\|Ga0187806_1033724	Not Available	1521	Open in IMG/M
3300017930\|Ga0187825_10442773	Not Available	503	Open in IMG/M
3300017966\|Ga0187776_11114998	Not Available	587	Open in IMG/M
3300018006\|Ga0187804_10101608	Not Available	1181	Open in IMG/M
3300021170\|Ga0210400_10947966	Not Available	701	Open in IMG/M
3300021171\|Ga0210405_10288688	Not Available	1297	Open in IMG/M
3300021180\|Ga0210396_10321529	Not Available	1368	Open in IMG/M
3300021404\|Ga0210389_10354601	Not Available	1152	Open in IMG/M
3300021406\|Ga0210386_11605481	Not Available	540	Open in IMG/M
3300021559\|Ga0210409_10108727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2553	Open in IMG/M
3300021560\|Ga0126371_12056389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300025321\|Ga0207656_10402692	Not Available	688	Open in IMG/M
3300025906\|Ga0207699_10435491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	938	Open in IMG/M
3300025911\|Ga0207654_11069043	Not Available	587	Open in IMG/M
3300025915\|Ga0207693_10103611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2232	Open in IMG/M
3300025916\|Ga0207663_10265337	Not Available	1270	Open in IMG/M
3300025918\|Ga0207662_10372314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	963	Open in IMG/M
3300025918\|Ga0207662_11127853	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300025928\|Ga0207700_10039074	Not Available	3450	Open in IMG/M
3300025928\|Ga0207700_10393218	Not Available	1214	Open in IMG/M
3300025934\|Ga0207686_11695992	Not Available	522	Open in IMG/M
3300025935\|Ga0207709_10767254	Not Available	776	Open in IMG/M
3300025942\|Ga0207689_10069388	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300026497\|Ga0257164_1067279	Not Available	593	Open in IMG/M
3300030707\|Ga0310038_10098224	Not Available	1535	Open in IMG/M
3300031543\|Ga0318516_10239471	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300031545\|Ga0318541_10669713	Not Available	580	Open in IMG/M
3300031564\|Ga0318573_10639598	Not Available	572	Open in IMG/M
3300031668\|Ga0318542_10214787	Not Available	972	Open in IMG/M
3300031681\|Ga0318572_10039907	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300031682\|Ga0318560_10359859	Not Available	786	Open in IMG/M
3300031713\|Ga0318496_10071226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1831	Open in IMG/M
3300031713\|Ga0318496_10587198	Not Available	615	Open in IMG/M
3300031723\|Ga0318493_10502100	Not Available	670	Open in IMG/M
3300031736\|Ga0318501_10006530	All Organisms → cellular organisms → Bacteria	4215	Open in IMG/M
3300031736\|Ga0318501_10099331	Not Available	1450	Open in IMG/M
3300031747\|Ga0318502_10548547	Not Available	694	Open in IMG/M
3300031751\|Ga0318494_10398393	Not Available	798	Open in IMG/M
3300031751\|Ga0318494_10666992	Not Available	608	Open in IMG/M
3300031764\|Ga0318535_10154648	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300031764\|Ga0318535_10438670	Not Available	582	Open in IMG/M
3300031765\|Ga0318554_10565258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300031765\|Ga0318554_10838303	Not Available	513	Open in IMG/M
3300031769\|Ga0318526_10072104	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300031770\|Ga0318521_11044823	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031771\|Ga0318546_10903518	Not Available	622	Open in IMG/M
3300031779\|Ga0318566_10070318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1690	Open in IMG/M
3300031782\|Ga0318552_10360480	Not Available	740	Open in IMG/M
3300031793\|Ga0318548_10104303	Not Available	1359	Open in IMG/M
3300031796\|Ga0318576_10056441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1714	Open in IMG/M
3300031796\|Ga0318576_10179123	Not Available	994	Open in IMG/M
3300031796\|Ga0318576_10471841	Not Available	592	Open in IMG/M
3300031799\|Ga0318565_10341914	Not Available	726	Open in IMG/M
3300031805\|Ga0318497_10632031	Not Available	600	Open in IMG/M
3300031805\|Ga0318497_10644549	Not Available	594	Open in IMG/M
3300031845\|Ga0318511_10078468	Not Available	1376	Open in IMG/M
3300031846\|Ga0318512_10094242	Not Available	1400	Open in IMG/M
3300031860\|Ga0318495_10010912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3745	Open in IMG/M
3300031890\|Ga0306925_11713357	Not Available	606	Open in IMG/M
3300031896\|Ga0318551_10424228	Not Available	758	Open in IMG/M
3300031896\|Ga0318551_10953070	Not Available	502	Open in IMG/M
3300031897\|Ga0318520_11092803	Not Available	505	Open in IMG/M
3300031910\|Ga0306923_10833775	Not Available	1015	Open in IMG/M
3300031912\|Ga0306921_10905439	Not Available	1001	Open in IMG/M
3300031912\|Ga0306921_11561966	Not Available	719	Open in IMG/M
3300031938\|Ga0308175_100614001	Not Available	1172	Open in IMG/M
3300032001\|Ga0306922_10918121	Not Available	908	Open in IMG/M
3300032009\|Ga0318563_10168449	Not Available	1178	Open in IMG/M
3300032010\|Ga0318569_10139597	Not Available	1111	Open in IMG/M
3300032010\|Ga0318569_10206014	Not Available	911	Open in IMG/M
3300032010\|Ga0318569_10358603	Not Available	679	Open in IMG/M
3300032039\|Ga0318559_10126278	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300032044\|Ga0318558_10088840	Not Available	1433	Open in IMG/M
3300032052\|Ga0318506_10151542	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300032054\|Ga0318570_10306095	Not Available	723	Open in IMG/M
3300032055\|Ga0318575_10177332	Not Available	1066	Open in IMG/M
3300032063\|Ga0318504_10162121	Not Available	1033	Open in IMG/M
3300032065\|Ga0318513_10367830	Not Available	701	Open in IMG/M
3300032066\|Ga0318514_10361932	Not Available	769	Open in IMG/M
3300032089\|Ga0318525_10268447	Not Available	877	Open in IMG/M
3300032090\|Ga0318518_10348176	Not Available	760	Open in IMG/M
3300032160\|Ga0311301_10722906	Not Available	1392	Open in IMG/M
3300032205\|Ga0307472_101980040	Not Available	583	Open in IMG/M
3300032829\|Ga0335070_10448294	Not Available	1228	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.91%
Host-Associated	Host-Associated	10.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.16%
Plants	Host-Associated → Plants	10.09%
Aquatic	Environmental → Aquatic	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.59%
Freshwater	Environmental → Aquatic → Freshwater	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.15%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.75%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00348330	2166559006	Grass Soil	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAEAARGRLGRGR
E41_01178960	2170459005	Grass Soil	MAVVPDAGKPLSPQAADLTRRVARVVLGEPADLMAEVHAAVLAG
Ga0066388_1038525141	3300005332	Tropical Forest Soil	VPDAGELLSPQAADLAHRIARVFLDEPAELMDQVHAAVSAAA
Ga0070666_101805824	3300005335	Switchgrass Rhizosphere	MAVVPEAGEPLSPQAADLVRRIARTVLDEPADLMDQVHAAVS
Ga0070695_1015213012	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVPDAGESLSPEAADLVRRVARVFLDEPADLMAEVHAAVSAAADEP
Ga0066903_1054706641	3300005764	Tropical Forest Soil	VPDTGEPLSPQAADLARRIARMFLDEPAELMDQVHAAVS
Ga0068865_1010739471	3300006881	Miscanthus Rhizosphere	MAVVPEAGEPLSPQAADLVRRIARTVLDEPADLMDQ
Ga0066709_1038746311	3300009137	Grasslands Soil	MAVVPDAGEPLSPQAADLIRRIARVVLDEPADLMAEVQA
Ga0116224_101952962	3300009683	Peatlands Soil	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEVHAAVSA
Ga0116216_101432761	3300009698	Peatlands Soil	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAEVHAAVLAAADEPL
Ga0116216_101769081	3300009698	Peatlands Soil	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEVHA
Ga0126379_101115542	3300010366	Tropical Forest Soil	PARCRAPLSPQAADLVRRIARMVLNEPADLMAEVHAAVFAAAD*
Ga0126379_133964011	3300010366	Tropical Forest Soil	MRGPLSPQAADLVRRIARVFPDEPGGLMAGIHAAVSAAA
Ga0136449_1009985184	3300010379	Peatlands Soil	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEVHAAV
Ga0157344_10282691	3300012476	Arabidopsis Rhizosphere	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAELHA
Ga0164298_109979212	3300012955	Soil	MAVVADAGEPLSAQAADLIRQIARVFLDEPADLMAEVHAAVSAAADE
Ga0126369_128342712	3300012971	Tropical Forest Soil	MAVVHDAGEPLSPQAADLARRIARVFLDEPADLMDQVYTPSRPSSG
Ga0157371_114639891	3300013102	Corn Rhizosphere	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAE
Ga0132258_114018201	3300015371	Arabidopsis Rhizosphere	MAVMPDAGEPDAGKPLSPQAADLVRRIARTILDEPADLLDQVHAAVA
Ga0132255_1003138821	3300015374	Arabidopsis Rhizosphere	MAVVPDAGESLSPEAADLVRRVARVFLDEPADLMAEV
Ga0182036_111187982	3300016270	Soil	MRVVPEAGELLSPQAADLVRRIARGILDEPADLMDQVHAAV
Ga0182033_106738022	3300016319	Soil	VADAGELLSPQAAELVRRIARMILDEPADLMDQVQA
Ga0182033_109458442	3300016319	Soil	MAVVPDAGEPDATEPLSPQAADLVRRIARVILDEPADLMDQVHADVSAAADEPLRS
Ga0182035_103848721	3300016341	Soil	MAVVPDAGEPLSPQAADLVRRIARAVLDEPADLMA
Ga0182040_104107291	3300016387	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQVQAAEEPLN
Ga0187806_10337243	3300017928	Freshwater Sediment	MAVVADAGEPLSPQAADLTRRVARVFLDEPADLMAELHA
Ga0187825_104427732	3300017930	Freshwater Sediment	MAVVADAGEPLSPQAADLIRRVARVVLDEPADLMAE
Ga0187776_111149983	3300017966	Tropical Peatland	VPDAGEPDAGGILSPQAADLVRRIAGVVLGEPADLMAAVHAAVSAAAD
Ga0187804_101016081	3300018006	Freshwater Sediment	MAVVADAGEPLSPQAADLIRRVARVFLDEPADLMA
Ga0210400_109479662	3300021170	Soil	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAE
Ga0210405_102886881	3300021171	Soil	MTVVPDVGEPLSPQAADLVRRIARMVLDEPADLMTEVQAAVSAA
Ga0210396_103215293	3300021180	Soil	MAVVPDAGEPLSPQAANLVRRIARMVLDEPTDLMAEVQAA
Ga0210389_103546013	3300021404	Soil	MAVVPGAGELLSPQAADLVRRLARGILDEPADLMAEVYAAV
Ga0210386_116054811	3300021406	Soil	MAVVADAGEPLSPQAADLIRRVARVFLDEPADLMAELH
Ga0210409_101087275	3300021559	Soil	VADAGEPLSPQAADLVRRVARVFLDEPADLMAELHAAVLAAVD
Ga0126371_120563891	3300021560	Tropical Forest Soil	MATVPDAGEPLSPQAADLVRRISRAVLDEPAELMAEVHAAV
Ga0207656_104026922	3300025321	Corn Rhizosphere	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEAHA
Ga0207699_104354911	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAELHAA
Ga0207654_110690432	3300025911	Corn Rhizosphere	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEAH
Ga0207693_101036114	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MMTVVPDAGESLSPQAADLVRRVAQRILDEPAELMD
Ga0207663_102653371	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVPDAGESLSPEAADLVRRVARVFLDEPADLMAE
Ga0207662_103723141	3300025918	Switchgrass Rhizosphere	MAVVPDAGEPLSPEAADLVRRVARVFLDEPADLMA
Ga0207662_111278532	3300025918	Switchgrass Rhizosphere	MAVVPEAGEPLSPQAADLVRRLARTILDEPADLMDQVHAAVSAAA
Ga0207700_100390741	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPDAAGPLSPQTADLVRRIARVVLDEPADLMDQVQAAVSAAADE
Ga0207700_103932181	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAVVPDAGEPLSPQAADLIRRIARVFLDEPADLMAELHAAVSAAADE
Ga0207686_116959921	3300025934	Miscanthus Rhizosphere	MAVVPEAGEPLSPQAADLVRRIARTVLDEPADLMDQV
Ga0207709_107672542	3300025935	Miscanthus Rhizosphere	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEAHAAVSAAADEPLR
Ga0207689_100693887	3300025942	Miscanthus Rhizosphere	MAVVPEAGEPLSPQAADLVRRIARTVLDEPADLMDQVHAAVSAA
Ga0257164_10672792	3300026497	Soil	MTVVAGAGEPLSPQAADLVRRVARVFLDEPADLMAE
Ga0310038_100982241	3300030707	Peatlands Soil	MAVVADAGEPLSPQAADLVRRVARVFLDEPADLMAEV
Ga0318516_102394712	3300031543	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQVHAAVSAAADEP
Ga0318541_106697132	3300031545	Soil	VPDSGEQLSPQAADLARRIARVFLDEPADLMAEVHAAVSAAA
Ga0318573_106395981	3300031564	Soil	MTVVPDAGEPLSPQAADLVRRIARVFLDEPADLMDQVQAAVS
Ga0318542_102147873	3300031668	Soil	VADAGELDAGEPLSPQAADMVRRIARVILDEPADLMD
Ga0318572_100399071	3300031681	Soil	VADAGEPDAGEPLSPQAADLVRRIARAILDEPADLMDQVHEAVSAAAC
Ga0318560_103598592	3300031682	Soil	MAVVPDAGEPLSPQAADLVRRIARAVLDEPADLMAEVYAAE
Ga0318496_100712261	3300031713	Soil	MAVVPDAGEPLSPQAADLVRRIARAVLDEPADLMAEVYAAVS
Ga0318496_105871982	3300031713	Soil	VADAGELDAGEPLSPQAADMVRRIARVILDEPADLMDRV
Ga0318493_105021001	3300031723	Soil	MAVVPDHGQPLSPQAADLVRRIARTVLDEPADLMTEVYAAVSAAA
Ga0318501_100065301	3300031736	Soil	VPDAGEPLSPQAADLARRIARVILDEPADLMAEVHA
Ga0318501_100993311	3300031736	Soil	MAIVPDAGEPLSPQAADLVRRIARVFLDEPADLMDQVQAAVSA
Ga0318502_105485472	3300031747	Soil	MAVMPDAGEPDAGKLLSPQAADLVRRIARTILDDPDDLMDQVHAA
Ga0318494_103983931	3300031751	Soil	LSPQAADLIRRIARVFLDEPGELMAEVQAAVSAAAD
Ga0318494_106669921	3300031751	Soil	VPDSGEQLSPQAADLARRIARVFLDEPADLMAEVHAAVSAAADEPLR
Ga0318535_101546481	3300031764	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQV
Ga0318535_104386702	3300031764	Soil	MAIVPDAGEPLSPQAADLVRRIARVFLDEPADLMDQVQ
Ga0318554_105652583	3300031765	Soil	VSDAGEPDAAEPLSPQAAGLVRRIARAVLDEPADLMAEVYA
Ga0318554_108383032	3300031765	Soil	LSPQAADLVRRVAQVFLDEPADLMDQVQAAVSAAADEPL
Ga0318526_100721041	3300031769	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQ
Ga0318521_110448232	3300031770	Soil	MAVVPDVGELLSPQAADLVRRIARMVLDEPADLMDQVQAAVSAAADEPL
Ga0318546_109035181	3300031771	Soil	MAVVPDAGEALSPQAAELVRRIARRILDEPADLMAEIYAAVSAA
Ga0318566_100703184	3300031779	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQVHAAVSAAADEPL
Ga0318552_103604802	3300031782	Soil	MAVVPDAGEPLSPQAADLVRRIARAVLDEPADLMAEV
Ga0318548_101043033	3300031793	Soil	VADAGEPDAGEPLSPQAADLVRRIARAILDEPADLMDQVHEAVSAAACGD
Ga0318576_100564411	3300031796	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQVHAAVSA
Ga0318576_101791231	3300031796	Soil	VPDSGKQLSPQAADLARRIARVFLDEPADLMAEVHAAVSAAADEP
Ga0318576_104718412	3300031796	Soil	MAAVPDAGKPLSPQAADLVRRIARAVLDEPADLMAEVYAAVSA
Ga0318565_103419142	3300031799	Soil	VPDSGKQLSPQAADLARRIARVFLDEPADLMAEVHAAV
Ga0318497_106320312	3300031805	Soil	MAVVPDAGEPLSPQAADLVRRIARGILDEPADLMD
Ga0318497_106445492	3300031805	Soil	MAVVPDNGQPLSPQAADLVRRIARVFLDEPADLMAEMYAAVS
Ga0318511_100784683	3300031845	Soil	VADAGEPDAGEPLSPQAADLVRRIARAILDEPADLMDQV
Ga0318512_100942423	3300031846	Soil	VADAGEPDAGEPLSPQAADLVRRIARAILDEPADLMDQVH
Ga0318495_100109121	3300031860	Soil	VPDAGEPLSPQAAELVRRIARVFLDEPADLMDQVHSAV
Ga0306925_117133571	3300031890	Soil	MAVVPDAGEALSPQAAELVRRIARRILDEPADLMAEIHAAVS
Ga0318551_104242281	3300031896	Soil	MAIVPDAGEPLSPQAADLVRRIARVFLDEPADLMDQVQAAVSAAADEP
Ga0318551_109530702	3300031896	Soil	MAVVTHAGEPLSPQAADLVRRIARVILDEPADLMAEVQAAVSAAAMSRCAPSRCWPRR
Ga0318520_110928031	3300031897	Soil	MAVVPDAAEPLSPQAADLVRRIARVILDEPAGLMDQVQAAVT
Ga0306923_108337753	3300031910	Soil	VADAGEPDAGEPLSPQAADLVRRIARAILDEPADLMDQVHEAVSAAAD
Ga0306921_109054391	3300031912	Soil	VADAGEPDAGEPLSPQAADLVRRIARGILDQPAGLMSQV
Ga0306921_115619662	3300031912	Soil	MAVVPDNGQPLSPQAADLVRRIARVFLDEPADLMAEMYAAVSAAADEP
Ga0308175_1006140011	3300031938	Soil	MTVVPEAGEPLSPQAADLVRRIARTILDEPDDLLDQVHAAVSAAA
Ga0306922_109181212	3300032001	Soil	MAVVPDHGQPLSPQAADLVRRIARTVLDEPADLMTEVYAAVSAAADEP
Ga0318563_101684492	3300032009	Soil	MAVVPDAGEPLSPQAADLVRRIARGILDEPADLMDQVHAAVSAACT
Ga0318569_101395971	3300032010	Soil	MAVVPDHGQPLSPQAADLVRRIARTVLDEPADLMTE
Ga0318569_102060143	3300032010	Soil	VADAGEPDAGEPLSPQAADLVRRIARGILDEPADLMDRV
Ga0318569_103586031	3300032010	Soil	VPDAGEPLSPQAAELVRRIARVFLDEPADLMAEMHA
Ga0318559_101262782	3300032039	Soil	MRVVPEAGEPLSPQAADLVRRIARGILDEPADLMDQVH
Ga0318558_100888401	3300032044	Soil	VPDAGEPLSPQAAELVRRIARVFLDEPADLMAEMHAAVSAAADEPL
Ga0318506_101515421	3300032052	Soil	VPDAGESLSPQAAELARRIARVFLDEPADLMAEVHAA
Ga0318570_103060952	3300032054	Soil	MTVVPDAGEPLSPQAADLVRRIARVFLDEPADLMDQVQA
Ga0318575_101773321	3300032055	Soil	MAVMPDAGEPLSPQAADLVRQVAQAVLDEPADLMAEVYAAVSAAADEPLR
Ga0318504_101621213	3300032063	Soil	MAVVPDAGEPLSPQAADLVRRIARGILDEPADLMDQVHAAVSAAC
Ga0318513_103678302	3300032065	Soil	MAVVPDNGQPLSPQAADLVRRIARVFLDEPADLMAEMYA
Ga0318514_103619321	3300032066	Soil	MTVMPDAGEPLSPQAADLVRQVAQVVLDEPADLMAEVYAAVS
Ga0318525_102684471	3300032089	Soil	MTVMPDAGEPLSPQAADLIRQIAQMVLDEPADLMA
Ga0318518_103481762	3300032090	Soil	MAVVPDAGEPLSPQAADLVRRIARAVLDEPADLMAEVYAAVSA
Ga0311301_107229061	3300032160	Peatlands Soil	MAVVPDAGEPLSPQAADLVRRVARVFLDEPADLMAEVHAAVSAAAD
Ga0307472_1019800401	3300032205	Hardwood Forest Soil	VPDAGEPLSPQAADLVRRIARVFLDEPADLMAELHAAVLA
Ga0335070_104482943	3300032829	Soil	VPDAGEPDAREPLSPQAADLVRRIARVILDEPADFM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088397

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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