Metagenome Family F088440

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088440
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	123 residues
Representative Sequence	AATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH
Number of Associated Samples	95
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	88.07 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (25.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.624 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.94% β-sheet: 0.00% Coil/Unstructured: 44.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13432	TPR_16	2.75
PF00486	Trans_reg_C	1.83
PF07719	TPR_2	1.83
PF01464	SLT	1.83
PF13400	Tad	0.92
PF13414	TPR_11	0.92
PF13430	DUF4112	0.92
PF13505	OMP_b-brl	0.92
PF13428	TPR_14	0.92
PF00232	Glyco_hydro_1	0.92
PF05717	TnpB_IS66	0.92
PF01478	Peptidase_A24	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.92
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	96.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	93.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	93.58 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	93.58 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1058117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300002911\|JGI25390J43892_10036634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1180	Open in IMG/M
3300004268\|Ga0066398_10223649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300005174\|Ga0066680_10696974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300005332\|Ga0066388_105294593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300005332\|Ga0066388_106116900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300005364\|Ga0070673_102029916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300005367\|Ga0070667_101663895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300005435\|Ga0070714_101443964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	672	Open in IMG/M
3300005437\|Ga0070710_10379107	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005468\|Ga0070707_101998123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300005576\|Ga0066708_10885782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005713\|Ga0066905_100147009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1691	Open in IMG/M
3300005764\|Ga0066903_102675997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300005764\|Ga0066903_105316889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300005764\|Ga0066903_109114572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300006038\|Ga0075365_11177321	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006845\|Ga0075421_102679302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300006853\|Ga0075420_101867054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300006871\|Ga0075434_101851039	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006871\|Ga0075434_102427245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300006880\|Ga0075429_101681269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300006969\|Ga0075419_10804810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300009100\|Ga0075418_10687165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1103	Open in IMG/M
3300009148\|Ga0105243_10592934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1066	Open in IMG/M
3300009156\|Ga0111538_13045638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300010043\|Ga0126380_10416890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300010043\|Ga0126380_11729506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300010043\|Ga0126380_12010115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300010046\|Ga0126384_10584968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	975	Open in IMG/M
3300010046\|Ga0126384_11389615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300010048\|Ga0126373_11850945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300010359\|Ga0126376_10476067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300010360\|Ga0126372_11946054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300010362\|Ga0126377_11657710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300010366\|Ga0126379_12323572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300010376\|Ga0126381_101242872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1076	Open in IMG/M
3300012201\|Ga0137365_10303902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1182	Open in IMG/M
3300012209\|Ga0137379_11553951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300012356\|Ga0137371_10909994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300012923\|Ga0137359_11199107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300012948\|Ga0126375_10049266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2232	Open in IMG/M
3300012948\|Ga0126375_10442138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300012951\|Ga0164300_10962954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300012955\|Ga0164298_11544782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300012961\|Ga0164302_10122928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1480	Open in IMG/M
3300012971\|Ga0126369_10976895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300012984\|Ga0164309_10534696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300012988\|Ga0164306_10954611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300012988\|Ga0164306_11543336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300014969\|Ga0157376_11338211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300015371\|Ga0132258_10894629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2241	Open in IMG/M
3300015371\|Ga0132258_12928081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300015372\|Ga0132256_100912972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300015372\|Ga0132256_100953539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300015374\|Ga0132255_101085137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M
3300016294\|Ga0182041_11342385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300016319\|Ga0182033_10102153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2112	Open in IMG/M
3300016371\|Ga0182034_12060316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300016387\|Ga0182040_11092336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300017933\|Ga0187801_10230776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300017955\|Ga0187817_10078226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2065	Open in IMG/M
3300017955\|Ga0187817_10664171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300018028\|Ga0184608_10040422	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300018076\|Ga0184609_10542303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300018469\|Ga0190270_11354590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300021510\|Ga0222621_1088828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300022694\|Ga0222623_10339216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300025916\|Ga0207663_10678924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300025928\|Ga0207700_11192011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300025937\|Ga0207669_10359581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300026498\|Ga0257156_1084025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300027181\|Ga0208997_1058814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300027546\|Ga0208984_1070644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300027681\|Ga0208991_1224117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300028711\|Ga0307293_10152250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300028712\|Ga0307285_10123417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300028715\|Ga0307313_10222819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300028719\|Ga0307301_10151840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300028755\|Ga0307316_10239469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300028787\|Ga0307323_10107342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300028819\|Ga0307296_10561788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300028878\|Ga0307278_10355745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300031544\|Ga0318534_10296895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300031564\|Ga0318573_10127817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1322	Open in IMG/M
3300031668\|Ga0318542_10080297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1544	Open in IMG/M
3300031681\|Ga0318572_10083267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1780	Open in IMG/M
3300031748\|Ga0318492_10578928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300031751\|Ga0318494_10086340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1713	Open in IMG/M
3300031763\|Ga0318537_10013888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2747	Open in IMG/M
3300031833\|Ga0310917_10757540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031845\|Ga0318511_10053779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1622	Open in IMG/M
3300031846\|Ga0318512_10610715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031860\|Ga0318495_10546351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031879\|Ga0306919_11130826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031894\|Ga0318522_10312263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300031897\|Ga0318520_10041135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2381	Open in IMG/M
3300031910\|Ga0306923_10232290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2109	Open in IMG/M
3300031942\|Ga0310916_10077054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2625	Open in IMG/M
3300031942\|Ga0310916_11477933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300031954\|Ga0306926_11878527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300031981\|Ga0318531_10036142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2049	Open in IMG/M
3300032065\|Ga0318513_10544334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300032076\|Ga0306924_12300027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300032174\|Ga0307470_11882575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300032180\|Ga0307471_103986136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300032261\|Ga0306920_101285137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300032261\|Ga0306920_102719953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300033290\|Ga0318519_10317961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.57%
Host-Associated	Host-Associated	17.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.15%
Plants	Host-Associated → Plants	17.43%
Aquatic	Environmental → Aquatic	6.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.76%
Sediment	Environmental → Aquatic → Sediment	3.67%
Freshwater	Environmental → Aquatic → Freshwater	2.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.75%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.39%
Loam	Environmental → Terrestrial → Soil → Loam	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10581171	3300000837	Forest Soil	VPATDVIRYALGPVMDVAATSEDSKQIFLALGHHFALQGQLDLFATQILGSLRGDPRPQLGYRIDTLLDLLARVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLFMLKQVGGR*
JGI25390J43892_100366343	3300002911	Grasslands Soil	AATSEDSKQIFLALGEHFARQGQLDLFAAQILSLLGGDSRPQLGYRIDTLLDLLARVPGPVARLLVPGAGKAADRNESAGLEEEESKRRGSFMLNQVGGR*
Ga0066398_102236491	3300004268	Tropical Forest Soil	HFALHGQVDLFAIQILTSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEESKRRGLLMLNEPSGR*
Ga0066680_106969742	3300005174	Soil	YFASQGQLDLFAGQIINSLRGDSRSQLGHRIDILLDLLARVPGACSALARIVPGTGDPSDQECSSSFSGKLQKHIETTMRAGEEEELKRRGLVMLNQLGGR*
Ga0066388_1052945931	3300005332	Tropical Forest Soil	VMDAAATSEDSKQIFVALGQYFGLQGQLDLFAAQILGSLRGDSRPQLGYRIDTLLDSLARVPGACGALAHLVPDASEPSDRECSFSQNLRTHIETTAPAHEEEEESKRHGLFMLKQVGGR
Ga0066388_1061169001	3300005332	Tropical Forest Soil	YPQSEAVRSVVPAMDAIRYALGPVMDVAATSEDSKQVFLALGQHFALQGQLDLFATQILDFLRGDSRPQLIYRVDTLLDLLARVSGACGALSRLLPGAGNAADQECLFSENLRKYVETTQRPSAAQEEESKRRGLLMLNELGER*
Ga0070673_1020299162	3300005364	Switchgrass Rhizosphere	FALQGQLDLFATQILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVPGAGNAADQECSLGENLRKYIETTRPSAGEEEESKRRGLLMLNQLGER*
Ga0070667_1016638951	3300005367	Switchgrass Rhizosphere	RFALQGQLDLFATQILELVRGDSRPQLIHRVDTLVDLLAGVPGACGALARLVPGADKAADQECSFSEHLRKFIETTRSSAAEQEEDSKRRGLLMLNQLSGG*
Ga0070714_1014439642	3300005435	Agricultural Soil	GPVMDVAATSEDSQQIFVALGQHFAFQGELDVFAIQILDSLRGDSRPHLNSRVDTLLDLLARVPGACGALARLVPGASKVADQECLLGETLRKYIETTQPAPAEEESKGRALLMLNQLGDR*
Ga0070710_103791071	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	APSEDSKQILLALGQHFALQGELNLFATQILDSLRGDSRPQLMPRVDTLLDLLARVPGACGALARLVPGAGKAADQECLFSENLRKFIETTRPSAADEEESKRRGLLMLNQLGDR*
Ga0070707_1019981231	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PALTTEDSKQAFLALGQHFAMQGQLDLFAGQIINSLRGDSRPQLDYRIDTLVDLLARVRGACGALARLVPEAGDGSDQECSLSFSGKLRKHIEMTTPAGEEEESKRRGLVMLSQLDGR*
Ga0066708_108857822	3300005576	Soil	ALQGQVDLFAAQILISLRGDPRPRLGYRIDTLLDLLARVPGACGALARLIQGEGEAADRECSFSQNLRKHIEATAPAREEEESKRRGLFMLNQLGGR*
Ga0066905_1001470094	3300005713	Tropical Forest Soil	MDVAATSEDSKQIFLALGHHFALQGQLDLFATQILGSLRGDPRPQLGYRIDTLLDLLARVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLFMLKQVGGR*
Ga0066903_1026759972	3300005764	Tropical Forest Soil	QLDLFATQILSSLRGDSRPQLGYRIDNLLDLLARVPGACDALARLVSGTGEATDRECSFSKNLRKHIETTAPAGEEEESKRRGLFMLNQLGER*
Ga0066903_1053168891	3300005764	Tropical Forest Soil	AAGEDSKQIFLALGQHFALHGQMDLFATQILTSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEESKRRGLLMLNQPSGR*
Ga0066903_1091145721	3300005764	Tropical Forest Soil	YALGAVMDVAAMSEESKQIFLALGQHFARQGQLDLFATQILNSLRGDSHPQLSYRIDTLLDLLARVPGTCAALARRIPGASEVADQECSFRENLRKYVETTAPAPDEEEESRRRGLLMLNQLSGG*
Ga0075365_111773211	3300006038	Populus Endosphere	IFIALEEHFALRRQLDLFATQILHSMRGDSRPQLGHRIDTLLDLLARVPAACGALARLISTADQVVDRECSFAAQLQKYIETATPAPDEEEESKRRGLLLLSQLGEG*
Ga0075421_1026793022	3300006845	Populus Rhizosphere	TSEDSKQIFLALGQHFALQGQLDLFASEILGSLRGDSRPQLIHRVDTLLDLLARVSGACGALARRLGEGKAADQECLFSENLRKYIETTRPAAGEEEESKRRGLLMLNELGER*
Ga0075420_1018670541	3300006853	Populus Rhizosphere	ARNYPQSEAVRSVVPAKDVIRYALGPVMAATSEDSKQIFLALGQHFGLHGELDLFATQILDLLRGDSRPQLIHRVDTLLDLLGRVPDACGALARRLSPAPGKAADQECLFSENLRRYIETTRPSAAQEEESKGRGLLMLNELGER*
Ga0075434_1018510392	3300006871	Populus Rhizosphere	ALGQHFALQGELNLFATQILDSLRGDSRPQLMPRVDTLLDLLARVPGACGALARLVPGAGKAADQECLFSENLRKFIETTRPSAADEEESKRRGLLMLNQLGDR*
Ga0075434_1024272451	3300006871	Populus Rhizosphere	QLDLFATQILSSLRGDLRPQLGYRIDNLLDLLARVPGACGALARLVPGTGEAAGRECSFSENLRKHIETTAQAGKAEESKRRGLLMLNQLSGR*
Ga0075429_1016812691	3300006880	Populus Rhizosphere	QHFALHGQLDLFATQLLTSLRGDSRPQLYHRLDTLLDLLERVPGSCAALSRLLPGAAGAFEPECSLSLNEKLRKHVETTTPAHEEEEGKRRGLFMLNQLGGR*
Ga0075419_108048102	3300006969	Populus Rhizosphere	LKGQLDLFATQILDSLRGDSRPQLTHRVDTLLDLLGRVPDACGALARRLSAGPGKAADQECLFSENLRKFIETTRPSAAQEEESKRRGLLMLNELGER*
Ga0075418_106871652	3300009100	Populus Rhizosphere	LFDRGVATYASARTDGDRTSAAHLISAAALVGFSPARDLVARNYPQSEAVRAVVAASDAIRYALTPIMDVTMTSDESKQIFIALEEHFALRRQLDLFATQILHSMRGDSRPQLGHRIDTLLDLLARVPAACGALARLISTADQVVDRECSFAAQLQKYIETATPAPDEEEESKRRGLLLLSQLGEG*
Ga0105243_105929341	3300009148	Miscanthus Rhizosphere	EAVRSVVPAKDVIRYALVPVMAAANEDSKQIFVALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVPGAGKAADQECLFSENLRKFIETTRSSAAEQEEDSKRRGLLMLSQLSGG*
Ga0111538_130456381	3300009156	Populus Rhizosphere	DLFASQIFDFLRGDSRPQLIHRVDTLLDLLGRVPDACGALARRLSPAPGKAADQECLFSENLRKYIETTRPSAAQEEESKRRGLLMLNELGER*
Ga0126380_104168902	3300010043	Tropical Forest Soil	LGSISPFKASFFATQILGSLRGDPRPQLGYRIDTLLDLLARVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLFMLKQVGGR*
Ga0126380_117295061	3300010043	Tropical Forest Soil	LFASQILDSLRGDSRPQLIHRVDTLLDLLPHVPGACGALARRLLPSPGQAANQECFFSEDLRKYIETTRPSAAQEEESKRRGLLMLNEVGERYRDPRGSPTTT*
Ga0126380_120101151	3300010043	Tropical Forest Soil	SDDSKQIFLVLGEHFARQGQLDLFAMQILSLLRGDSRPQLGYRIDSLLDLLARVPGACAALARLVPGAGKAADQECSFSESLRKHIETTAPAAEEEESKRRGLSMLNQVGGR*
Ga0126384_105849681	3300010046	Tropical Forest Soil	LGSISPFKASFFATQILGSRRGDPRPELGYRIDTLLDLLARVPGVCGALVRLIPGEGEAADRECSFSQNLRKHVETTAPAREEEEESKRRGLFMLKQVGGR*
Ga0126384_113896152	3300010046	Tropical Forest Soil	KDVIRYALGPVMDAAATGENSKQIFLVLGQHFALQGQVDLFATQILISLRGDSRPQLGYRIDTLLDLLVRVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLLMLNQLGGR*
Ga0126373_118509452	3300010048	Tropical Forest Soil	ILLALGQHFALHGQVDLFATQILISLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGDAADQKCSFSQNLREHVETTAPAREEEESKRRGLLMLKQLGGR*
Ga0126376_104760671	3300010359	Tropical Forest Soil	MDPALTTEDSKQAFLALGQHFAIQGQLDLFAGQIINSLRGDSRPQLDYRIDTLVDLLARVRGACGALARLVPEAGDRSDQECSSSFSGKLRKHIEMTTPAGEEEESKRRGSVMFSQLDGR
Ga0126372_119460541	3300010360	Tropical Forest Soil	GPLMDPALTTEDSKQAFLALAQHFAIQGQLDLFAGQIINSLRGDSRPHLDYRIDTLVDLLARVRGACGALARLVPEAGDGSDQECSSSFSGKLRKYIEATMQAGGDEQELKRRGLVMLNQLDGH*
Ga0126377_116577101	3300010362	Tropical Forest Soil	VGYPPARDLLARNYPQSEAVRSVVPAKDAIRYALSPVMDVAATSEDSKQIFLALGQHFALQGQLDLFATQILDLLRGDSRPQLIHRVDTLLDLLPHVPGACGALARRLLPSPGQAANQECFFSEDLRKYIETTRPSAAQEEESKRRGLLMLNELGER*
Ga0126379_123235721	3300010366	Tropical Forest Soil	LALGRHFDVQRQLDLFATQILSSLRRDSRPQLGYRIDNLLDLLARVPGACGALARLVPGTGEAAGRECSFGENLRKHIDTTAPAGEEEESKRRGLFMLNQLGGR*
Ga0126381_1012428722	3300010376	Tropical Forest Soil	LVGFPLARELLARNYPQSEAVRSVVPANDAIRYALGPLMDPALTTEDSKQAFLALGQHFAIQGQLDLFAGQIINSLRGDSRPHLDYRIDTLVDLLARVRGACGALARLVPEAGDGSDQECSSSFSGKLRKHIEMTTPAGEEEESKRRGSVMFSQLDGR*
Ga0137365_103039021	3300012201	Vadose Zone Soil	EDSKQIFLALGQHFALQEELDLFASQILDSLRGDSRPQLIYRVDTLLDLLARVPGACGALARLLPGAGKVADQECLFSENLRKYIETTRPSAAGEEESKHRGLLMLNQLGGR*
Ga0137379_115539511	3300012209	Vadose Zone Soil	YFASQGQLDLFAGQIINSLRGDSRPQLGHRIDMLLDLLARVPGACGALARLVPEAGDASDQECSSSFSEKLRKHIETITPAGEEEESKRRGLVMLNQLGGR*
Ga0137371_109099941	3300012356	Vadose Zone Soil	QIFLALGQHFALQGQLDLFATQILVSLRGDPRPQLGYRIDTLLDLLARVPGACGALARLVPGAGEAVDRECSFSQNLRKHIETTAPAPAESKRRGSFMLKQVGGR*
Ga0137359_111991072	3300012923	Vadose Zone Soil	SVVPAKDVIRYVLGPVMDVAATSEDSKQTFLALGQHFASQGQLDLFAAQILSLLRGDSRPQLGYRIDTLLDLLARVPGACGALARLVPGAGEAAGRECSFSESLRKHIETTSPASEEEDSKRRGLSMLKQVGGR*
Ga0126375_100492663	3300012948	Tropical Forest Soil	MDVAATSEDSKQIFLALGHHLALQGQLDLFATQILGSLRGDPRPQLGYRIDTLLDLLARVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLFMLKQVGGR*
Ga0126375_104421382	3300012948	Tropical Forest Soil	YANAKTNEERARAAGLIQTAALVGLPLARELLARNYPQSEAVRSVVPANDAIRYALGPLMDPALTTEDSKLVFLALGQHFAIQGQLDLFAGQIINSLRGDSRPHLDYRIDTLVDLLARVRGACGALAHLVPEAGDGSDQECSSSFSGKLRKHIEMTMRAGEEEESKRRGLVMLNQIDGH*
Ga0164300_109629542	3300012951	Soil	QGQLDLFAAQILNSVRGDSRPQLGYRIETLLDLLASVPGACQALSRLLTSTGEAAEQECSFSEKLRKYIETTAPASEEAESKRRGLIMLNQLGGR*
Ga0164298_115447821	3300012955	Soil	SAKTDGERASSTHLIQTAALVGFFPARELLARNYPHSEPVRSVVAANDVIRYALGLLMDVAATSEDSKQIFLALAQHFALQGQLDLFAAQILNSVRGDSRPQLGYRIETLLDLLASVPGACQALSRLLTSTGEAADQECSFSEKLRKYIETTAPASEEAELKRRGLIMLTQLG
Ga0164302_101229282	3300012961	Soil	VMAAASEDSKQIFLALGQYFAVQRQLDVLATEILDLVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVPGAGNAADQECSLGENLRKYIETTRPSAGEEEESKRRGLLMLNQLGER*
Ga0126369_109768952	3300012971	Tropical Forest Soil	LARNYPQSEAVRLVVPAKDVIRYALGPVMDAAATGENSKQIFLVLGQHFALQGQVDLFATQIFISLRGDSGPQLGYRIDTLVDLLVRVPGVCGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEEESKRRGLLMLNQLGGR*
Ga0164309_105346961	3300012984	Soil	RGVVGYASAKTDGERASSTHLIQTAALVGFFPARELLARNYPHSEPVRSVVAANDVIRYALGLLMDVAATSEDSKQIFLALAQHFALQGQLDLFAAQILNSLRGDSRPQLGYRIETLLDLLASVPGACQALSRLLTSTGEAADQECSFSEKLRKYIETTAPASEEAESKRRGLIMLNQLGGR*
Ga0164306_109546111	3300012988	Soil	FLALAQHFALQGQLDLFAAQILNSLRGDSRPQLGYRIETLLDLLASVPGACQALSRLLTSTGEAAEQECSFSEKLRKYIETTAPASEEAESKRRGLIMLNQLGGR*
Ga0164306_115433361	3300012988	Soil	KQIFLALGQHFAVQGQLDAFATEILDLVRGDSRPQLIHRVDTLVDLLARVPGACGALARLMPGAGKAADQECSFSENLRKFIETTRSSAAEQEEDSKRRGLLMLNQLSGG*
Ga0157376_113382111	3300014969	Miscanthus Rhizosphere	QIFLALEQHFADQGQLDVFATEILDLVRGDSRPQLIHRVDTLVDLLTRVPGACGALARLVPGTDKAADQECSFSEHLRKFIETTRSSAAEQEEDSKRRGLLMLNQLSGG*
Ga0132258_108946292	3300015371	Arabidopsis Rhizosphere	RGLLARNYPQSGAVRSVVPAKDVIRYALGPIMDVAATGDDSQQIFVALGQHFALQGELDVFATQILDSLRGDSRPHLNARVDTLLDLLARVSGACNALARLVPGAGKVADEKCLFGETLRKYIETTQPVPAEAEAKGRALLMLNQLGDH*
Ga0132258_129280811	3300015371	Arabidopsis Rhizosphere	MDIGATNEDSKQVFLALGQYFANQGQLDLFAGQIINSLRGDSRPHLGHRIDMLLDLLARVPGTCGALARIVPGPGDPSDQECSSSFSGKLRKYIEATMQAGGDEQESKRRGLVLLNQLDGH*
Ga0132256_1009129721	3300015372	Arabidopsis Rhizosphere	MDIGATNEDSKQVFLALGQYFANQGQLDLFAGQIINSLRGDSRPHLGHRIDMLLDLLARVPGTCGALARIVPGPTDPSDQECSSSFSGKLRKYIEATMQAGGDEQESKRRGLVLLNQLDGH*
Ga0132256_1009535391	3300015372	Arabidopsis Rhizosphere	LLARNYPQSEAVRSVVPAKDVIRYALGPVMDVAATREDSKQIFLALGQHFALQGQLDLFASQILDLLRGDSRPQLTYRVDTLLDLLAHVPEACGALARLVPAAGKAADQECLFSENLRKYIETTRPSAAQEEESKRRGLVILNELGER*
Ga0132255_1010851371	3300015374	Arabidopsis Rhizosphere	MDIGATNEDSKQVFLALGQYFAIQGQLDLFAGQIINSLRGDSRPHLGHRIDMLLDLLARVPGTCGALARIVPGPGDPSDQECSSSFSGKLRKYIEATMQAGGDEQESKRRGLVLLNQLDGH*
Ga0182041_113423851	3300016294	Soil	VGFSPARGIIARNYPQSEAVRSVVPANDVIRYALGAVMDVAAMSEESKQIFLALGQHFAHQGQLDLFATQILNSLRGDSHPQLSYRIDTLLGLLARVPGTCAALARRIPGASEVADQECSFRENLRKYIETTAPAPDEEEESTRRGLLMLNQLSGG
Ga0182033_101021531	3300016319	Soil	VMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0182034_120603161	3300016371	Soil	DGDRARAAGLIQTVALVGFPLARELLARNYPHSEAVRSVVPANDAIRYALGPLMDPALTTEDSKQAFLALGQHFAIQGQLDLFAGQIINSLRGDSRPHLDYRIDTLVDLLARVRGACGALARLVPEAGDGSDQECSSSFSGKLRKHIEMTTPASEEEESKRRGLVMLS
Ga0182040_110923361	3300016387	Soil	AATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH
Ga0187801_102307761	3300017933	Freshwater Sediment	VRYALGPVMDVAAMSEESKQIFLALGQHFARQGQLDLFATQILNSLRGDSRPQLSYRIDTLLDLLARVPGTCAALARRIPGAGEVADQECFLGENLRKYIETTRPSAAEEESKRRGLLMLNQLGER
Ga0187817_100782265	3300017955	Freshwater Sediment	VGFSPARGIIARNYPQSEAVRSVVPANDVVRYALGPVMDVAAMSEESKQIFLALGQHFARHGQLDLFATQILNSLRGDSRPQLSYRIDTLLDLLARVPGTCAALARRIPGAGEVADQECFLGENLRKYIETTRPAAAEEEPKRRGLLMLNQLGER
Ga0187817_106641711	3300017955	Freshwater Sediment	FLALGQHFARQRQLDLFATQILNSLRGDSRPQLSYRIDTLLDLLARVPGTCAALARRIPGAGEVADEECSFRENLRKYIETTAPAPDEEEESRRRGLLMLNQLSGG
Ga0184608_100404223	3300018028	Groundwater Sediment	QIFLALGQHFALQGELDLFAKQILDSLRGDSRPQLIHRVETLLDLLARVPGAFGALARLVPGAGKAADQECSFSENLRKFIETTRSSAAEQEEESKRRGLLMLNQVGER
Ga0184609_105423031	3300018076	Groundwater Sediment	VMAAASEDSKQIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVAGAGKAADQECSFSENLRKFIETTRSSAAEQEEDSKRRGVLMLNQLGGR
Ga0190270_113545901	3300018469	Soil	DVIRYALGPVMAATSEDSKQIFLALGQHFAAQGQLDVFATEILELLRGDSRPQLIHRVDTLVDLLARVPGACGALARLVPGAGKAADQECSFSENLRKFIETTRSSAAEQEEDSKRRGLLMLNQLSGG
Ga0222621_10888281	3300021510	Groundwater Sediment	PVMAAASEDSKQIFLALGQHFAGQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGAIARLVAGAGKAADQECSFSENLRKFIETTRSSAAEEEESKRRGLLMLNQLGER
Ga0222623_103392161	3300022694	Groundwater Sediment	KQIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGAIARLVAGAGKAADQECSFSENLRKFIETTRPSAAEQEEESKRRGVLMLNQLGGR
Ga0207663_106789242	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAATSEDSQQIFVALGQHFAFQGELDVFAIQILDSLRGDSRPQLMPRVDTLLDLLARVPGACGALARLVPGAGKAADQECWFSENLRKFIETTRPSAADEEESKRRGLLMLNQLGDR
Ga0207700_111920111	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHLAAPSEDSKQILLALGQHFALQGELNLFATQILDSLRGDSRPQLMPRVDTLLDLLARVPGACGALARLVPGAGKAADQECWFSENLRKFIETTRPS
Ga0207669_103595813	3300025937	Miscanthus Rhizosphere	QIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVPGAGTAADQECSFSENLRKFIETTRSSAAEQEEDAKRRGLLMLNQLSGG
Ga0257156_10840251	3300026498	Soil	YPQSEAVRSVVPANDAIRYAIGTLMDTGATSEDSKQVFLALGQYFASQGQLDLFAGQIINSLRGDSRPQLGHRIDMLLDLLARVSEACGALARIVPGTGDPSDQECSSSFSEKLRKHIETTMRASEEEELKRRGLVMLNQLDGR
Ga0208997_10588141	3300027181	Forest Soil	LARNYPQSDAVRSVVPANDVIRYALGPVMDVAATSEDSKQIFLALGQHFALQVQLDLFATQIISSLRGDSRPQLGYRIDTLLDLLARVPRACRALARLVPGPGKAADQECLFSENLRKYIETTRPAAAEEEPKRRGLLMLGQLGER
Ga0208984_10706441	3300027546	Forest Soil	ALFGYPPARDLLARNYPQSDAVRSVVPANDVIRYALGPVMDVAATSEDSKQIFLALGQHFALQVQLDLFATQIISSLRGDSRPQLGYRIDTLLDLLARVPRACRALARLVPGAGEAANQDCSFSGNLRKYIETTAPAPAEEEESKRRGLLMLNQLDGR
Ga0208991_12241171	3300027681	Forest Soil	QCGAVRLVVPAKDVIRYALGSVMDVVATSEDSKQIFLALGQHFALQGELDLFATQILHSLSGDSRPQLVYRVDTSLDLLALVPGACGALARLVPGPGKAADQECLFSENLRKYIETTRPAAVEEEEPKRRGLLMLNQLGER
Ga0307293_101522501	3300028711	Soil	IRYALGPVMAATSEDSKQIFLALGQHLALQGELDLFAKQILDSLRGDSRPQLIHRVETLLDLLAHVPGACGALARLVPGAGKVADQECFLGENLRKFIETTRPSAAEEEESKHRGLLMLNQVGER
Ga0307285_101234171	3300028712	Soil	PVMAAASEDSKQIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRLETLLDLLARVPGACGALARLVPGAGKAADQECSFSENLRKFIETTRSSAAEEEESKRRGLLMLNQLGER
Ga0307313_102228191	3300028715	Soil	QHLALQGELDLFAKQILDSLRGDSRPQLIHRVETLLDLLAHVPGACGALARLVPGAGKVADQECFLGENLRKFIETTRPSAAEEEESKHRGLLMLNQVGER
Ga0307301_101518402	3300028719	Soil	SEAVRSVVPAKDVIRYALVPVRAAASEDSKQIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVAGAGKAADQECSFSENLRKFIETTRSSAAEQEEDSKRRGLLMLSQLSGG
Ga0307316_102394691	3300028755	Soil	PVMAAASEDSKQIFLALGQHFAVQGQLDVFATEILELVRGDSRPQLIHRVDTLVDLLARVPGACGALARLVAGAGKAADQECSFSENLRKFIETTRSSAAEQEEDSKRRGVSMLNQLGGR
Ga0307323_101073421	3300028787	Soil	FLTLGQHFALQGQLDLFATQILELVRGDSRPQLIHRLETLLDLLARVPGACGALARLVPGAGKAADQECLFSEDLRKFIETARPSAAEEEEESKRRGLLMLNQLGER
Ga0307296_105617881	3300028819	Soil	LIQTAALVGYPPARDLLARNYPQSEAVRSVVPAQDVIRYALGPVMAATSEDSKQIFLALGQHFALQGELDLFAKQILDSLRGDSRPQLIHRVETLLDLLAHVPGACGALARLVPGAGKVADQECFLGENLRKFIETTRPSAAEEEESKHRGLLMLNQVGER
Ga0307278_103557451	3300028878	Soil	TFASATNDGDRVRGASLIQTAALVGFPPARELLVRNFPQSEAVRSVVSANDVIRYALALLMDGVASEDSKGSFLALGQHFALHGQLDLFATQLLTSLRGDSRPHLYHRLDTLLDLLERVPRSCASLSRLLPGAGGASEPECSLSLSEKLRKHVETTTPAHEEEEEGKRRGLFMLNQLGGR
Ga0318534_102968951	3300031544	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0318573_101278173	3300031564	Soil	TTRNPKRCVRSFLRRMSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0318542_100802972	3300031668	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEP
Ga0318572_100832671	3300031681	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEE
Ga0318492_105789281	3300031748	Soil	LRRMSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0318494_100863403	3300031751	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGAVARLIPGEREAADRECAFGQNLRKHIETTAPAREEEESKRRGLLMLSHPSGRWRGVVRGWSAAS
Ga0318537_100138881	3300031763	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGDAADQKRSFSQNLRQHVETTAPAREEEES
Ga0310917_107575401	3300031833	Soil	FLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH
Ga0318511_100537792	3300031845	Soil	FALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGAVARLIPGEREAADRECAFGQNLRKHIETTAPAREEEESKRRGLLMLSHPSGRWRGVVRGWSAAS
Ga0318512_106107151	3300031846	Soil	QIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGAVARLIPGEREAADRECAFGQNLRKHIETTAPAREEEESKRRGLLMLSHPSGRWRGVVRGWSAAS
Ga0318495_105463511	3300031860	Soil	RSVVPAEDVIRYALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRVDTLLDLLARVPGACGAVARLIPGEREAADRECAFGQNLRKHIETTAPAREEEESKRRGLLMLNQPSGR
Ga0306919_111308261	3300031879	Soil	EQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH
Ga0318522_103122632	3300031894	Soil	MSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILTSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEE
Ga0318520_100411351	3300031897	Soil	GEDSKQIFLALGQHVALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0306923_102322903	3300031910	Soil	LPPWWATLRRATCSRATTRNPKRCVRSFLRRMSSAALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0310916_100770541	3300031942	Soil	EDSKQIFLALGQHFALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0310916_114779331	3300031942	Soil	LGAVMDVAAMGEESKQIFLALGQHFARQGQLDPFATQILYSLRGDSRPQLSYRIDTLLDLLARVPGTCAALAHRIPGVGQVASDQECSFRENLRKYIETTAPAPDEEEESKRRGLLMLNQLSGG
Ga0306926_118785271	3300031954	Soil	ATGEDSKQIVLALGQHFALQEQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH
Ga0318531_100361423	3300031981	Soil	ALQGQVDLFATQILILLGGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETPPPAREEEESKRRGLLMLNEPSGR
Ga0318513_105443341	3300032065	Soil	LLARNYPQSEAVRSVVPAEDVIRYALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGAVARLIPGEREAADRECAFGQNLRKHIETTAPAREEEESKRRGLLMLSHPSGRWRGVVRGWSAAS
Ga0306924_123000271	3300032076	Soil	AAMSEESKQILLALGQHFARQGQLDLFATQILNSLRGDSRPLLSYRIDTLLDLLARVPGTCAALARRIPGAGEVADQECSFRENLRKYIETTAPAPDEEEESRRRGLLMLNQLSGG
Ga0307470_118825751	3300032174	Hardwood Forest Soil	NEDTKQIFLALGQHFALQGQLDLFASQILDLLRGDSRPQLIHRVDTLVDLLARVPGACGALARLVAGAGKAADQECSFSENLRKFIETTRSSAAEQEEESKRRGLLMLNQVADR
Ga0307471_1039861361	3300032180	Hardwood Forest Soil	DGDRARAAGLIQTAALAGLPLARELLARNYPQSEAVRSVVPANDAIRYAIGSLMDTGVTNEDSKQVFLALGQYFAIQGQLDLFAGQIINSLRGDSRPHLGRRIDMLLDLLARVSEACGALARLVPGTGDPSDQECSSSFSEKLRKHIETTMRAGEEEELKRRGLVMLNQLDGR
Ga0306920_1012851373	3300032261	Soil	LQGQVDLFATQILISLRGDSRPQLGYRIDTLLHLLARVPGACGALARLIPGEGEAADRECSFSQNLRKHIETTAPAREEEESKRRGLLMLNQTSGR
Ga0306920_1027199531	3300032261	Soil	QTAALVGFSPARGIIARNYPQSEAVRSVVPANDVIRYALGAVMDVAAMSEESKQILLALGQHFARQGQLDLFATQILNSLRGDSRPQLSYRIDTLLDLLARVPGTCAALARRIPGVGEVADQECSFRENLRKYIETTAPAPDEEEESRRRGLLMLNQLSGG
Ga0318519_103179611	3300033290	Soil	DVIRYALGPVMDAAATGEDSKQIFLALGQHFALQGQVDLFATQILSSLRGDSRPQLGYRIDTLLDLLARVPGACGALARLIPGEGEAANRECSFSQNLRKHIETTAPTREEEESKRRGLLMLNQLSGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088440

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences