Metagenome / Metatranscriptome Family F088452

Basic Information
Family ID	F088452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	135 residues
Representative Sequence	ATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Number of Associated Samples	105
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.697 % of family members)
Environment Ontology (ENVO)	Unclassified (39.450 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.872 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.83% β-sheet: 39.63% Coil/Unstructured: 58.54%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.8.0: automated matches	d2jlpa_	2jlp	0.71277
b.1.8.1: Cu,Zn superoxide dismutase-like	d3f7la_	3f7l	0.6875
b.1.8.1: Cu,Zn superoxide dismutase-like	d2aqma_	2aqm	0.68043
b.1.8.0: automated matches	d1xtma_	1xtm	0.67593
b.1.8.1: Cu,Zn superoxide dismutase-like	d1pzsa_	1pzs	0.67178

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02913	FAD-oxidase_C	71.56
PF12680	SnoaL_2	9.17
PF10099	RskA	6.42
PF05436	MF_alpha_N	0.92
PF07883	Cupin_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	71.56

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.89%
Host-Associated	Host-Associated	32.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.30%
Plants	Host-Associated → Plants	32.11%
Aquatic	Environmental → Aquatic	4.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.01%
Sediment	Environmental → Aquatic → Sediment	2.75%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Phylloplane	Host-Associated → Plants → Phylloplane	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.34%
Loam	Environmental → Terrestrial → Soil → Loam	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100441301	3300000891	Soil	AVVLFLVLGGDDNAGKKSASTSPAASTAQDQPRVTAQVNLTPPQDAPEKKAVAIVQVVDVKGQQAINAVSQGLPTPKNAAYGIWVYSSPSQARLIGGFNKTDNKGHLVFQGALPQDFDISAYNEILVTRETSGNPKRPGTVYLRGTISGGSSSG*
JGI10216J12902_1041219702	3300000956	Soil	AIAAVLVIVLTGGDDKKADGSTTRAGTTSTQAQPQVRAQVNLTPPRGAPVKKAVAIVQFVDLNGQQAINAATQGLPTSKKIVYGLWFYNSPSQAKLIGGFDKTDNKGHLVLQGQLPAGVDISSYKDLVVTRERPNTNPTSPGTIYLRGTIQDASGG*
JGI10216J12902_1190749071	3300000956	Soil	VNLTAPQGAPARKAVAVVQIVDVGGTEAVNAISQGLTPSNKSAFAIWVYSSPSHAKLIGGFNKKDSNGHLVYQGALPNDFDITAYSKILVTRETSGSPKQPGTVYLSGDIPRSSGG*
JGI10216J12902_1199537081	3300000956	Soil	GAILIAAVAAVVVAVVLLLVLTGKDDNKPQRAADTTTTTSSTSTQPVVQAQVNLTPPKGAPAAKALAIVQVVESNGQKVVNAVAQGLPTSTKAAYAIWAYTSPTETRLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKEIIVTRETSGNPTTPGTIYLRGPMQAGSGG*
C688J14111_100923931	3300001305	Soil	STQAQPKVRAQVNLTAPKGAPVKKAVAIVQFVELNGQEAINAATQGLPNSKKVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGAIYLRGSIQNAAGG*
Ga0062593_1018478821	3300004114	Soil	ATSTQSQPKVQAQVNLTAPQGAPAPKALAIVQIVDVDGTEAVNAVSQGLKASDKAAYAIWVYSTPSHAKLIGAFNKKDNNGHLVFQGALPKGFDITGYNKILVTRETSGSPKQPGTVYLSGDIPRSSGG*
Ga0063455_1012802982	3300004153	Soil	ELNGQEAINAATQGLPNSKKVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGAIYLRGSIQNAAGG*
Ga0062589_1009264962	3300004156	Soil	LLIGGALAAIAIAVVLVIVLSGGNDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0062592_1010779822	3300004480	Soil	LAAIAIAVVLVIVLSGGDDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0070682_1010898452	3300005337	Corn Rhizosphere	IGGAVVAIAIAVVLVLVLTGGKDDKSASTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPNSKTVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0070660_1010351901	3300005339	Corn Rhizosphere	AIVQFVDVNGQQAINAATQGLPNSKTVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTMQNAAGG*
Ga0070674_1010976842	3300005356	Miscanthus Rhizosphere	AAQPTVKAQANLTPPKGAPASKALAIVQIVESNGQDVVNAVAQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG*
Ga0070659_1012992991	3300005366	Corn Rhizosphere	AVAAVLVVALTGGGKDDNSAAGTATQAADTTSTAAQPQVRAQINLTPPRNAPAKKALAIVQIVDVSGEQAINAVSQGLPTSNKNAAYGIWAYSSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVNLAGYKEILVTLETTGRPTRPGTIYLRGAIQNAAGG*
Ga0070700_1012544101	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	GALLIGGALAAVAIAVVLVIVLTGGKDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0070662_1013134182	3300005457	Corn Rhizosphere	IAVVLVIVLSGGDDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0070693_1006750742	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	STATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPNSKTVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0058697_103627662	3300005562	Agave	DDNKPERAASTTTTATTSTQPVVQAQVNLTPPKGAPAAKALAIVQVVESNGQKVVNAVAQGLPTSSKAAYAIWAYTSPTEARLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPMQVGSTGG*
Ga0068855_1021186562	3300005563	Corn Rhizosphere	DTTSTAAQPQVRAQINLTPPRNAPAKKALAIVQIVDVSGQTAINAVSQGLPTSNKKAAYGIWAYTSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVDIAGYKELLVTLETSGNPTRPGTIYLRGAIQSAAGG*
Ga0068856_1011959982	3300005614	Corn Rhizosphere	VKKAVAIVQFVDVNGQQAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0070702_1003916701	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VAAVLVVALTGGGKDDNSAAGTATQAADTASTAAQPQVRAQINLTPPRNAPAKKALAIVQIVDVSGEQAINAVSQGLPTSNKNAAYGIWAYSSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVNLAGYKEILVTLETTGRPTRPGTIYLRGAIQNAAGG*
Ga0068852_1005906861	3300005616	Corn Rhizosphere	VVLVIVLTGKDDNNTPQRAADTATTSTAAQPTVKAQVNLTPPNGAPASKALAIVQIVESNGQDVVNAVAQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQAGSNGGG*
Ga0068862_1012898471	3300005844	Switchgrass Rhizosphere	AQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG*
Ga0075428_1020431892	3300006844	Populus Rhizosphere	VKAQVNLTPPKGAPASKALAIVQIVESNGQNVVNAVAQGLPTSSKAAYGIWAYSSPNEARLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKAIIVTRETSGNPTKPGQIYLSGPMQAASNGGG*
Ga0075421_1010461931	3300006845	Populus Rhizosphere	ATVVAVIAAVVLVIALTGKDDNNKPQRAADTTATSTAAQPTVKAQVNLTPPKGAPASKALAIVQIVESNGQNVVNAVAQGLPTSSKAAYGIWAYSSPNEARLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKAIIVTRETSGNPTKPGQIYLSGPMQAASNGGG*
Ga0075425_1015121051	3300006854	Populus Rhizosphere	VDVNGQQAINAATQGLPASKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGIDISSYKDLVITREKPSSNPTSPGTIYLRGSIQSAAGG*
Ga0068865_1007024132	3300006881	Miscanthus Rhizosphere	VTVIAAVVLVIVLTGKDDSKPQRAADTTATSTAAQPTVKAQVNLTPPNGAPASKALAIVQIVESNGQDVVNAVAQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG*
Ga0079219_107018462	3300006954	Agricultural Soil	LVFTGGDDKKNNAKNAADTTSTTSSTQSQAQVRAQVNLSRPQGSPATKDALAIVQVVDLNGQEAINAVSQGLKSSDKAAYAIWVYNSPSQAKLIGGFDKKDNKGHLVYQGALPQGFDITGYNEVLVTRETSGNPKQPGTVYLRGTIPKSSGG*
Ga0105240_126784791	3300009093	Corn Rhizosphere	INLTPPRNAPAKKALAIVQIVDVSGEQAINAVSQGLPTSNKNAAYGIWAYSSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVDIAGYKELLVTLETSGNPTRPGTIYLRGAIQSAAGG*
Ga0111539_121047181	3300009094	Populus Rhizosphere	APAKKALAIVQVVDSNGQEAVNAVSQGLPPPKKAAYAIWVYSSPSQTKLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKAIIVTRETSGNPTKPGQIYLSGPMQAASNGGG*
Ga0105245_127348551	3300009098	Miscanthus Rhizosphere	KKALAIVQIVDVSGEQAINAVSQGLPTSNKNAAYGIWAYSSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVNLAGYKEILVTLETTGRPTRPGTIFLRGAIQNAAGG*
Ga0105241_120014501	3300009174	Corn Rhizosphere	KSASTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0105242_113984882	3300009176	Miscanthus Rhizosphere	EALAIVQIVESNGQDVVNAVAQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG*
Ga0105248_133840432	3300009177	Switchgrass Rhizosphere	AQINLTPPKNAPAKKALAIVQIVNVSGQTAINAVSQGLPTSNKKAAYGIWAYTSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVNIADYKEILVTLETSGNPTRPGTIYLRGPVQSAAGG*
Ga0105238_105632672	3300009551	Corn Rhizosphere	DKKAFSTATQAADTTSTQAQPKVRAQVNLTPLKGAPVKKAVAIVQFVDVNGQQAINAATQGLPNSKTVVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0105249_113565822	3300009553	Switchgrass Rhizosphere	GKDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSESQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIRNAAGG*
Ga0126314_105549262	3300010042	Serpentine Soil	VQVVESNGQNVVNAVAEGLPTASKAAYGIWAYTSPSETRLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPMQAGSTGG*
Ga0126310_118809312	3300010044	Serpentine Soil	FVDINGQEAINAATQGLPNSKKVVYGLWFYNGRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG*
Ga0105239_129142001	3300010375	Corn Rhizosphere	VDKAKRTQVRAQINLTPPKNAPAKKALAIVQIVDVSGQTAINAVSQGLPISNKKAAYGIWAYTSPSQAKLVGGFDKKDDKGHLVYQGAVPRDVNLAGYKEILVTLETTGRPTRPGTIYLRGAIQNAAGG*
Ga0058701_107472801	3300010395	Agave	ESNGQKVVNAVAQGLPTSSNAAYAIWAYTSPTETRLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKEIVVSRETSGNPTKPGTIYLRGQMQAGTGG*
Ga0134126_109974761	3300010396	Terrestrial Soil	KVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPNSKTVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0137382_112227441	3300012200	Vadose Zone Soil	KVRAQVNLTPPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPTSKKIVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISTYKDLVITRERPSTNPTSPGTIYLRGSIQNAAGG*
Ga0137365_110213062	3300012201	Vadose Zone Soil	VAAVAVVLVLVLTGGDDNGKKTAANAADTTSTQAQPKVQAQVNLTPPQDAPAKKALAIVQVVDVNGQKAINAVSQGLPTTSKAAYGIWVYSSPSQAKLIGGFDKKDNNGHLVYQGALPTGVDITAYNEVLVTRETSGNPKSPGPVYLRGTIPKSSSG*
Ga0137374_104119531	3300012204	Vadose Zone Soil	DTTTTAQSQPKVQAQVNLTPPQDAPAKKALAIVQIVALNGQEAVNAVSQGLPNTSKAAYAIWVYSSPSQAKLIGGFDKKDNNGHLVYQGALPKDFDITSYNQILVTRETKGSPTQPGTVYLRGDIPRSSGG*
Ga0150985_1162184151	3300012212	Avena Fatua Rhizosphere	IAIVVVLVIVLGGGGDDNKPSSTATQAANTTSTQAQPKVRAQVNLTAPKGAPVKKAVAIVQFVELNGQEAINAATQGLPNSKKVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGAIYLRGSIQNAAGG*
Ga0137366_105445202	3300012354	Vadose Zone Soil	VLVLTGGDDNGKKTAANAADTTSTQAQPKVQAQVNLTPPQDAPAKKALAIVQVVDVNGQKAINAVSQGLPTTSKAAYGIWVYSSPSQAKLIGGFDKKDNNGHLVYQGALPTGVDITAYNEVLVTRETSGNPKSPGPVYLRGTIPKSSSG*
Ga0137369_104859201	3300012355	Vadose Zone Soil	LTPPKDAPAKKALAIVQIVDVSGQQAINAVSQGLPTSNKKAAYGIWAYNSPSQAKLIGGFNKTDNKGHLVFQGALPKDVDIASYKEMLVTQETTGNPTKPGTIYLRGSIQNAAGG*
Ga0150984_1122245841	3300012469	Avena Fatua Rhizosphere	LVIVLGGGGDDNKPSSTATQAANTTSTQAQPKVRAQVNLTAPKGAPVKKAVAIVQFVELNGQEAINAATQGLPNSKKVVYGLWFYNSKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGAIYLRGSIQNAAGG*
Ga0157329_10096191	3300012491	Arabidopsis Rhizosphere	IGGAVALIAIAVVLVIVLTGGDDSKKADSTATQAADTTSTQAQPQVRAQINLTPPKDGPAKKALAIVQIVDVNGQQAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVFQGALPKDVDVASYKDILVTQETQGNPTKPGTIYLRGSIQSAAGG*
Ga0157342_10726671	3300012507	Arabidopsis Rhizosphere	IAIAVVLVLVLSGGKDDKSGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQEAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0137373_109495502	3300012532	Vadose Zone Soil	VQIVASNGQNVVNAVAQGLPTTSKAAYGIWAYTSATETRLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGSPKKPGTIYLRGPMQTASGG*
Ga0157299_101768081	3300012899	Soil	KGSPVTKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNGQSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0157283_101184811	3300012907	Soil	LSGGDDKTPSSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIAQFVDLNGQEANNAATQGLPNSKKVVYGLWFYNGQSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0157301_104367051	3300012911	Soil	NTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0164300_103465852	3300012951	Soil	DLNGQQAINAATQGLPTSKKIVYGLWFYNSPSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIAGYKDLVITRERPSTNPTTPGTIYLRGSIQNAAGG*
Ga0164298_100405803	3300012955	Soil	ASASDTTPTTATTGAQPRVRAQINLTAPGAGSSTKRAGILWILDASGKPAFTAAAQGLPTTKGRAYGIWLYTSKTQAKLIGGFDQYDKQGRILASGALSADPTKYKDIIVTAEKGGQPKTPGRIVLQGAIANATAPSTGTGTTTTP*
Ga0164298_108548062	3300012955	Soil	ALVAIAIVVVLVVVLTGGGSDDKKTASTASQAADTTSTQAQPQVRAQVNMTPPQGAPVKKAVAIVQFVDLNGQHAINAATQGLPTSKKIVYGLWFYNGPSQATLIGGFDQTDNKGHLVLQGQLPKGVDIAGYKDLVITRERPSTNPTTPGTIYLRGSIQNAAGG*
Ga0164301_113655332	3300012960	Soil	VVLTGGGSDDKKTASSASQAADTTSTQAQPQVRAQVNMTPPQGAPVKKAVAIVQFVDLNGQQAINAATQGLPTSKKIVYGLWFYNGPSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0157307_10816892	3300013096	Soil	QVQPKVCAQVNLTPPKGSPVTKAVAIVQFVDLNGQEAINAAIQGLPNSKKVVYGLWFYNSQSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0157371_111747211	3300013102	Corn Rhizosphere	LTPPRNAPAKKALAIVQIVDVSGEQAINAVSQGLPTSNKNAAYGIWAYSSPSQAKLVGGFDKKDDKGHLVYQGAVPKDVNLAGYKEILVTLETTGRPTRPGTIYLRGAIQNAAGG*
Ga0182000_106097252	3300014487	Soil	VLTGNDDNKPKRAADTTTTTSVQPTVKAQANLTPPKGAPAAKALAIVQIVSSNGQNVVNAVAQGLPTTSKAAYGIWAYTSPSETRLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPMQAGTGG*
Ga0157377_114057052	3300014745	Miscanthus Rhizosphere	AIVQIVDVSGEQAINAVSQGLPTSNKKAAYGIWAYTSPSQAKLVGGFDKKDDKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG*
Ga0173483_107510291	3300015077	Soil	AQVNLTPPKGSPVTKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNSQSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0173480_109756012	3300015200	Soil	QPKVQAQVNLTAPQGAPAPKALAIVQIVDVDGTEAVNAVSQGLKASDKAAYAIWVYSTPSHAKLIGAFNKKDNNGHLVFQGALPKGFDITGYNKILVTRETSGSPKQPGTVYLSGDIPRSSGG*
Ga0132257_1013269492	3300015373	Arabidopsis Rhizosphere	DDGKKADSTTTQAANTTSTQAQPQVRAQVNLTPPKDGPAKKALAIVQIVDVNGQQAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVFQGALPKDVDVASYKDILVTQETQGNPTKPGTIYLRGSIQSAAGG*
Ga0132257_1014211701	3300015373	Arabidopsis Rhizosphere	ALAAIAIVVVLVIVLTGGKDDKPGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG*
Ga0132255_1022541511	3300015374	Arabidopsis Rhizosphere	AIAVAVVLVIVLTGGGNDNKSDGTATQAANTTSTQAQPRVRAQVNMTPPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPTSKKIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITSERPSTNPTSPGTIYLRGSIQNAAGG*
Ga0190266_108308982	3300017965	Soil	GAPVKKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0184605_105455411	3300018027	Groundwater Sediment	VSRRGGALLIGGALAAIAIAVVLVIVLSGGDDKKTDSTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRG
Ga0184619_104973512	3300018061	Groundwater Sediment	LVLSGGDDSKKADSTATQAAGTTSTAAQPQVRAQINLTPPKNGPAKKALAIVQIVDVSGQQAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVYQGALPKNLDVASYKEILVTQETSGNPTKPGTIYLRGPVQSAAGG
Ga0184618_101015761	3300018071	Groundwater Sediment	SDDKKTASTATQAAKTTSTAAQPQVRAQINLTPPKDGPAKKALAIVQIVDVSGQTAINAVSQGLPTSNKKAAYGIWVYSSPSKAKLVGGFNKQDDKGHLVFQGALPKDLNLGSYKEILVTLETSGNPAKPGTIYLRGTIQSAAGG
Ga0190269_109282171	3300018465	Soil	QPRVRAQINLTPPKDAPAKKALAIVQVVDVSGQTAVNAVSQGLPTSNTKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVFQGAMPKDVDISTYKEILVTQETSGNPTKPGRIYLRGAIQNAAGG
Ga0190268_112561492	3300018466	Soil	VQIVDAAGQQAINAVAQGLPTTSKAAYGIWAYTSPSQTRLIGGFDKKDGKGHLVYQGALPQDVTDITRYREILVTRETNGSPKKPGTIYLRGPIQTASGG
Ga0184644_15647361	3300019269	Groundwater Sediment	LVLSGGDDKKGESTGTQAANTTSTQAQPKVRAQINLTPPTNGPAKKALAIVQIVDVSGQQAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFDKTDSKGHLVFQGALPKDVDITSYKEILVTLETSGNPTKPGTIYLRGAIQSAAGG
Ga0173479_102637831	3300019362	Soil	TATTSTTGAQPTVRAQINLTAPGAGSSTKRAGILWILDAGGKPAFTAAAQGLPTTKGRAYGIWFYNSRTQAKLIGGFDQTDNKGHLVLQGQLPKGVDISSYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG
Ga0193705_10197681	3300019869	Soil	QVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0210381_100924361	3300021078	Groundwater Sediment	GDDKKNDPTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDVASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0247794_101869041	3300024055	Soil	VKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG
Ga0207704_109906912	3300025938	Miscanthus Rhizosphere	SKALAIVQIVESNGQDVVNAVAQGLPTNSKAAYGIWAYSGPDEARLIGAFDKTDNKGHLVYQGALPQDITDVTRYKEILVTRETGGSPTKPGQIYLRGPMQTGSNGGG
Ga0209382_112273631	3300027909	Populus Rhizosphere	LIATVVAVIAAVVLVIALTGKDDNNKPQRAADTTATSTAAQPTVKAQVNLTPPKGAPASKALAIVQIVESNGQNVVNAVAQGLPTSSKAAYGIWAYSSPNEARLIGGFDKTDNKGHLVYQGALPQDVTDVTRYKAIIVTRETSGNPTKPGQIYLSGPMQAASNGGG
Ga0247818_104411031	3300028589	Soil	VLVIVLTGGKDDKAGSTATQAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSESQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG
Ga0307321_10817502	3300028704	Soil	GDDKKTDSTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307276_100187672	3300028705	Soil	VNLTAPKSAPAAKALAIVQIVDVGGQQAINAVAQGLPTTSKAAYGIWAYTSPSQSRLIGGFDKKDDKGHLVYQGALPQDVTDITRYREIVVTRETNGSPKKPGAIYLRGPMKGATGG
Ga0307291_11188002	3300028707	Soil	APKGAPVKKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307279_100658661	3300028709	Soil	ALAAIGIAVVLVIVLGGSDDNKPSSTATQAANTTSTQAQPKVRAQVNMTAPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307322_100170272	3300028710	Soil	TPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307293_102381231	3300028711	Soil	MAPSAAPRVSRRGGALLIGGVLAAIAVAVVLVLVLTGGDDKKNDSTASKAANTTSTAAQPQVRAQINLTPPKNGPAKKALAIVQIVDVSGQSAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPIQAGSTGG
Ga0307309_100349132	3300028714	Soil	ATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307311_100637341	3300028716	Soil	LTAPAGAPAAKALAIVQVVSSNGQDVVNAVAQGLPTTSKAAYAIWAYTSPTETRLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPIQAGSTG
Ga0307307_102319721	3300028718	Soil	SAAPRVSRRGGALLIGGVLAAIAVAVVLVLVLTGGDDKKNDSTASKAANTTSTAAQPQVRAQINLTPPKNGPAKKALAIVQIVDVSGQQAINAVSQGLPTSKKAAYGIWVYSSPSQAKLIGGFDKQDNNGHLVYQGALPKDLNIASYKEILVTRETSGNPTKPGTIYLRGAIQSAAGG
Ga0307301_101668241	3300028719	Soil	AGGRLPELPAEGAVTETPEPEHEPDETPAATPFAPAPSHGPRVSRRGGALLIGGVVVAIAVAAVLVIVLTGGDDKKGDDTATNAANTTSTQAQPQVRAQINLTPPKGAPAKKALAIVQIVDVSGQTAINAVSQGLPTSNTKAAYGIWVYSSPSQAKLIGGFDKKDDKGHLVYQGAVPKDVDVASYKEVLVTLETSGNPTKPGTIYLRGAIQSAAGG
Ga0307319_103101652	3300028722	Soil	NMTAPEGAPAAKALAIVQVVSSNGQDVVNAVAQGLPTTSKAAYAIWAYTSPTETRLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPIQAGSTG
Ga0307318_101712872	3300028744	Soil	KGDDTATNAANTTSTQAQPQVRAQINLTPPKGAPAKKALAIVQIVDVSGQTAINAVSQGLPTSNTKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVYQGALPKNLDVASYKEILVTQETSGNPTKPGTIYLRGAIQSAAGG
Ga0307320_104650501	3300028771	Soil	AAGPRVSRRGGALLIGGALAAIAIAVVLVIVLSGGDDKKTDSTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLR
Ga0307306_100870122	3300028782	Soil	VDLNGQEAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307282_102628152	3300028784	Soil	STQAQPKVRAQINLTPPKNGPAKKALAIVQIVDVSGQSAINAVSQGLPTSNKKAAYGIWVYNSPSQAKLIGGFNKTDNKGHLVFQGALPKDVDVSSYKEILVTQETSGNPTKPGTIYLRGAIQSAAGG
Ga0307290_101033322	3300028791	Soil	AVVLVIVLSGGDDKKNDPTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDVASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307299_101896282	3300028793	Soil	AVAIVQFVDVNGQQAINAATHGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307287_100170144	3300028796	Soil	AQPTVKAQANMTAPEGAPAAKALAIVQVVSSNGQDVVNAVAQGLPTTSKAAYAIWAYTSPTETRLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPIQAGSTG
Ga0307292_102732282	3300028811	Soil	VLTGGDDKKGDDTATNAANTTSTQAQPQVRAQINLTPPKGAPAKKALAIVQIVDVNGQSAINAVSQGLPTSNKKAAYGIWAYNSPSQAKLIGGFDKQDNKGHLVFQGALPKDVDIAAYKDILVTLETSGNPTKPGTIYLRGAIQSAAGG
Ga0307296_106740372	3300028819	Soil	ATNAAKTTSTQAQPKVRAQINLAPPTGAPAKRALAIVQIVDVSGQQAINAVSQGLPTSKKAAYGIWVYSSPSQAKLIGGFNKQDNNGHLVYQGALPKDLNIASYKEILVTRETSGNPTKPGTIYLRGAIQSAAGG
Ga0307286_100297901	3300028876	Soil	GALTAIAIAVVLVIVLSGGDDKKTDPTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG
Ga0307278_104745231	3300028878	Soil	STQAQPKVRAQINLAPPTGAPAKKALAIVQIVDVSGQQAINAVSQGLPTSKKAAYGIWVYSSPSQAKLIGGFDKQDNNGHLVYQGAVPKGLDIASYKEILVTRETSGNPTKPGTIYLRGAIQSAAGG
Ga0307277_104486492	3300028881	Soil	QGLPTMSKVAYGIWAYTSSTETRLIGGFNKTDNKGHLVYQGALFQDVTDVTRYKEIFVTRETSGNPKTPGTIYLRGPMQTSSGG
Ga0307308_102255371	3300028884	Soil	AAIAIAVVLVIVLSGGDDKKNDPTATKAANTTSTQAQPKVRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKKIVYGLWFYNSKSQTKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQSAAGG
Ga0247826_101688502	3300030336	Soil	VRAQVNLTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPTSKTIVYGLWFYNSESQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGTIQNAAG
Ga0307495_100455002	3300031199	Soil	LFLVLSGGDDGKKADTTASKAADTTSTQAQPQVRAQVNLTPPKDAPAKKALAIVQIVDVNGQQAINAVSQGLPTSNQKAAYGIWVYNSPSQAKLIGGFDKTDNKGHLVFQGALPKDVDVASYKDILVTQETQGNPTKPGTIYLRGSIQSAAGG
Ga0307412_114786251	3300031911	Rhizosphere	TPPNDAPAKKALAIVQIVDVSGQQAINAVSEGLPTSNKKAAYGIWAYNSPSQAKLIGGFNKTDNKGHLVYQGALPQDVTDVTRYKEILVTRETSGNPTKPGTIYLRGPMQTSSGG
Ga0310902_111868511	3300032012	Soil	MTPPKGAPVKKAVAIVQFVDVNGQQAINAATQGLPASKTIVYGLWFYNSRSQAKLIGGFDQTDNKGHLVLQGQLPKGVDISTYKDLVITREKPSTNPTSPGTIYLRGTIQNAAGG
Ga0308173_104488142	3300032074	Soil	GGDDNKPSSTATQAANTTSTQAQPKVRAQVNLTAPKGAPVKKAVAIVQFVDLNGQEAINAATQGLPNSKKVVYGLWFYNGKSQAKLIGGFDQTDNKGHLVLQGQLPKGVDIASYKDLVITREKPSTNPTSPGTIYLRGSIQNAAGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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