Metagenome Family F088453

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088453
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	72 residues
Representative Sequence	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Number of Associated Samples	74
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.56 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.128 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.018 % of family members)
Environment Ontology (ENVO)	Unclassified (45.872 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.789 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 33.33% Coil/Unstructured: 41.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00072	Response_reg	13.76
PF04026	SpoVG	3.67
PF02265	S1-P1_nuclease	0.92
PF07883	Cupin_2	0.92
PF00496	SBP_bac_5	0.92
PF04392	ABC_sub_bind	0.92
PF03631	Virul_fac_BrkB	0.92
PF00158	Sigma54_activat	0.92
PF00589	Phage_integrase	0.92
PF04679	DNA_ligase_A_C	0.92
PF13472	Lipase_GDSL_2	0.92
PF00082	Peptidase_S8	0.92
PF09721	Exosortase_EpsH	0.92
PF13511	DUF4124	0.92
PF02470	MlaD	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2088	DNA- and RNA-binding protein SpoVG, cell septation regulator	Transcription [K]	3.67
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
All Organisms	root	All Organisms	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
cellular organisms	root	All Organisms → cellular organisms	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.50 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.50 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.92 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	5.50 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.92 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.50 %
Candidatus Magasanikbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Magasanikbacteria	0.92 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.50 %
unclassified Euzebyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae	0.92 %
Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Magasanikbacteria → Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	0.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.50 %
Euzebyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	0.92 %
Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Magasanikbacteria → Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	0.92 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10078890	Not Available	705	Open in IMG/M
3300000955\|JGI1027J12803_100509109	Not Available	565	Open in IMG/M
3300000955\|JGI1027J12803_105116491	Not Available	626	Open in IMG/M
3300003373\|JGI25407J50210_10117228	Not Available	656	Open in IMG/M
3300003911\|JGI25405J52794_10001087	All Organisms → cellular organisms → Bacteria	4349	Open in IMG/M
3300003911\|JGI25405J52794_10003882	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300004268\|Ga0066398_10007979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1452	Open in IMG/M
3300004633\|Ga0066395_10725018	Not Available	592	Open in IMG/M
3300005289\|Ga0065704_10160844	Not Available	1332	Open in IMG/M
3300005332\|Ga0066388_100451347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1927	Open in IMG/M
3300005332\|Ga0066388_101962451	Not Available	1047	Open in IMG/M
3300005332\|Ga0066388_103662327	Not Available	784	Open in IMG/M
3300005332\|Ga0066388_104013255	Not Available	750	Open in IMG/M
3300005332\|Ga0066388_105376676	Not Available	649	Open in IMG/M
3300005445\|Ga0070708_100116332	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300005468\|Ga0070707_101069021	Not Available	773	Open in IMG/M
3300005536\|Ga0070697_101542456	Not Available	594	Open in IMG/M
3300005713\|Ga0066905_100227603	Not Available	1416	Open in IMG/M
3300005713\|Ga0066905_101060764	Not Available	718	Open in IMG/M
3300005713\|Ga0066905_101070641	Not Available	714	Open in IMG/M
3300005713\|Ga0066905_101142428	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005764\|Ga0066903_101460626	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005764\|Ga0066903_102934174	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005764\|Ga0066903_103490136	Not Available	847	Open in IMG/M
3300005764\|Ga0066903_106158300	Not Available	627	Open in IMG/M
3300005937\|Ga0081455_10044690	All Organisms → cellular organisms → Bacteria	3861	Open in IMG/M
3300005937\|Ga0081455_10194971	Not Available	1522	Open in IMG/M
3300005937\|Ga0081455_10410917	Not Available	936	Open in IMG/M
3300005937\|Ga0081455_10657697	Not Available	674	Open in IMG/M
3300005981\|Ga0081538_10087340	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300005981\|Ga0081538_10215611	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005983\|Ga0081540_1116964	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300006049\|Ga0075417_10042981	Not Available	1922	Open in IMG/M
3300006058\|Ga0075432_10078048	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300006844\|Ga0075428_101965473	Not Available	607	Open in IMG/M
3300006852\|Ga0075433_10378406	Not Available	1250	Open in IMG/M
3300006852\|Ga0075433_11786722	Not Available	529	Open in IMG/M
3300006852\|Ga0075433_11894837	Not Available	512	Open in IMG/M
3300006871\|Ga0075434_101328318	Not Available	730	Open in IMG/M
3300006880\|Ga0075429_100445634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Magasanikbacteria → Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22	1135	Open in IMG/M
3300007255\|Ga0099791_10305266	Not Available	759	Open in IMG/M
3300009081\|Ga0105098_10012073	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300009100\|Ga0075418_12476394	Not Available	566	Open in IMG/M
3300009147\|Ga0114129_10486504	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300009157\|Ga0105092_10159603	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300009157\|Ga0105092_10251289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	993	Open in IMG/M
3300009792\|Ga0126374_10018693	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300009792\|Ga0126374_10072401	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300009807\|Ga0105061_1063078	Not Available	588	Open in IMG/M
3300009810\|Ga0105088_1006301	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300009818\|Ga0105072_1118992	Not Available	540	Open in IMG/M
3300010043\|Ga0126380_10468475	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300010046\|Ga0126384_11464497	Not Available	639	Open in IMG/M
3300010047\|Ga0126382_10151138	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300010047\|Ga0126382_12226529	Not Available	528	Open in IMG/M
3300010358\|Ga0126370_10057966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2499	Open in IMG/M
3300010358\|Ga0126370_11982614	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010359\|Ga0126376_10299573	Not Available	1397	Open in IMG/M
3300010360\|Ga0126372_10045909	All Organisms → cellular organisms → Bacteria	2909	Open in IMG/M
3300010360\|Ga0126372_10112026	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300010361\|Ga0126378_11600298	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010362\|Ga0126377_10610051	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300010362\|Ga0126377_11660991	Not Available	714	Open in IMG/M
3300010362\|Ga0126377_12550756	Not Available	587	Open in IMG/M
3300010362\|Ga0126377_13548182	Not Available	504	Open in IMG/M
3300010366\|Ga0126379_10471676	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300010366\|Ga0126379_11133632	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010366\|Ga0126379_13601053	Not Available	519	Open in IMG/M
3300010376\|Ga0126381_100167660	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300012038\|Ga0137431_1176454	Not Available	608	Open in IMG/M
3300012201\|Ga0137365_10709188	Not Available	735	Open in IMG/M
3300012202\|Ga0137363_10179481	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300012205\|Ga0137362_10599520	Not Available	950	Open in IMG/M
3300012353\|Ga0137367_11101429	Not Available	536	Open in IMG/M
3300012354\|Ga0137366_10321438	Not Available	1136	Open in IMG/M
3300012361\|Ga0137360_10031698	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300012685\|Ga0137397_10061648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2706	Open in IMG/M
3300012922\|Ga0137394_10027348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4615	Open in IMG/M
3300012922\|Ga0137394_10086329	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2630	Open in IMG/M
3300012922\|Ga0137394_10196908	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300012923\|Ga0137359_10241350	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300012948\|Ga0126375_11049564	Not Available	667	Open in IMG/M
3300012960\|Ga0164301_11280564	Not Available	593	Open in IMG/M
3300012971\|Ga0126369_10486122	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1290	Open in IMG/M
3300012971\|Ga0126369_11156990	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300013760\|Ga0120188_1056839	Not Available	516	Open in IMG/M
3300016341\|Ga0182035_10483451	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300016371\|Ga0182034_10410301	Not Available	1113	Open in IMG/M
3300016387\|Ga0182040_11541269	Not Available	565	Open in IMG/M
3300018064\|Ga0187773_10494499	Not Available	728	Open in IMG/M
3300019789\|Ga0137408_1395733	All Organisms → cellular organisms → Bacteria	4618	Open in IMG/M
3300020579\|Ga0210407_11035283	Not Available	625	Open in IMG/M
3300021560\|Ga0126371_10508682	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300025922\|Ga0207646_10670697	Not Available	928	Open in IMG/M
3300027277\|Ga0209846_1031388	Not Available	847	Open in IMG/M
3300027722\|Ga0209819_10043810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → unclassified Euzebyaceae → Euzebyaceae bacterium	1530	Open in IMG/M
3300027722\|Ga0209819_10086940	Not Available	1089	Open in IMG/M
3300027874\|Ga0209465_10404330	Not Available	683	Open in IMG/M
3300027880\|Ga0209481_10289561	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300027909\|Ga0209382_10919652	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031720\|Ga0307469_10034012	All Organisms → cellular organisms → Bacteria	3003	Open in IMG/M
3300031720\|Ga0307469_10465919	Not Available	1098	Open in IMG/M
3300031740\|Ga0307468_101178729	Not Available	689	Open in IMG/M
3300031740\|Ga0307468_102456037	Not Available	509	Open in IMG/M
3300032174\|Ga0307470_10676663	Not Available	783	Open in IMG/M
3300032180\|Ga0307471_100015756	All Organisms → cellular organisms → Bacteria	5321	Open in IMG/M
3300032180\|Ga0307471_103527500	Not Available	554	Open in IMG/M
3300032205\|Ga0307472_101209826	Not Available	722	Open in IMG/M
3300032261\|Ga0306920_100924834	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.90%
Host-Associated	Host-Associated	21.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.39%
Plants	Host-Associated → Plants	21.10%
Aquatic	Environmental → Aquatic	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.34%
Freshwater	Environmental → Aquatic → Freshwater	4.59%
Roots	Host-Associated → Plants → Roots	2.75%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.46%
Loam	Environmental → Terrestrial → Soil → Loam	18.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.59%
Sand	Environmental → Terrestrial → Soil → Sand	3.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.01%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.34%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	6.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013760	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100788902	3300000793	Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGTTLRCFEVHGPAGTFNSKEAAEKHILALAKTLIDNSI*
JGI1027J12803_1005091091	3300000955	Soil	MNDHNYGTHLIKFKADQTPDGTYWIGKAHVQYNDGRTLRCFEVNGPAEKFNSKKAAEEHI
JGI1027J12803_1051164912	3300000955	Soil	MNEHHYGTHLIKFKADRTPDGNYWIGKAHIQYNHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
JGI25407J50210_101172281	3300003373	Tabebuia Heterophylla Rhizosphere	MNEHNHGTHLIKFKADRTADGSYWIGKAHVQYNDGRTRRYFEVHGPAEKFASKEAAEQHVLGLAKTLIDNFI*
JGI25405J52794_100010876	3300003911	Tabebuia Heterophylla Rhizosphere	MNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAETFNSKEAAEEHVLALAKTLIDKFI*
JGI25405J52794_100038822	3300003911	Tabebuia Heterophylla Rhizosphere	MNEHNYGTHLIKFKAERTPDENYWIGKAHVQYNDGRTLRCFEVHGAAGKFKSKEAAEQHILGLAKTLIDKFI*
Ga0066398_100079793	3300004268	Tropical Forest Soil	KPGNMNEHNYGTHLIKFKAVRTLDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEQHVLALAKTLIDKFI*
Ga0066395_107250181	3300004633	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDK
Ga0065704_101608441	3300005289	Switchgrass Rhizosphere	MNEHNYGTHLIKFRADLTPDGTYWIGKAHVQYNHGRTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIENFI*
Ga0066388_1004513471	3300005332	Tropical Forest Soil	MSEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFDSKEAAEEHVLALAKTLIDKFI*
Ga0066388_1019624511	3300005332	Tropical Forest Soil	MNELQYGTHLIKFNAEQTPDGIYWLGKAHVQYNHGKMLRCFEVHGPAETFDSKEAAEQHVLGLA
Ga0066388_1036623272	3300005332	Tropical Forest Soil	MNELRYGTHLIKFNAEQTPDGIYWLGKAHVQYKNGRMLRCFEVHGPAETFNSKEAAEQHVLGLAKTLIDKFI*
Ga0066388_1040132552	3300005332	Tropical Forest Soil	MNEHNYGTHLIKFKAVRTPDENYWIGKAHVQYNDGRTLRCFEVHGLAGTFNSKEAAEQHVLALAKTLIDKFI*
Ga0066388_1053766762	3300005332	Tropical Forest Soil	MNNHNYGTHRIEFKADPTPDGNYWIGKAHVRYSHGRTLRCFEVHGPDRKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0070708_1001163322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHHYGTHLIKFKANRTPDGNYWIGKAHIQYNHGRMLRCFEVYGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0070707_1010690211	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHHYGTHLIKFKANRTPDGNYWIGKAHIQYNHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0070697_1015424561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHHYGTHLIKFKADRTPDGNYWIGKAHIQYNHGRMLRCFEVYGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0066905_1002276032	3300005713	Tropical Forest Soil	MNELRYGTHLIKFNAERTPDSTYWLGKAHVQYKNGRMLRCFEVHGPAETFDSKEAAEQHVVGLAKTLIDKFI*
Ga0066905_1010607642	3300005713	Tropical Forest Soil	MNEHHYGTHLIKFKADLTPDGTYWIGKAHVQYNHGRTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIDNFI*
Ga0066905_1010706411	3300005713	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGKMLRCFEVHGPAETFDSKEAAEQHVLGLAKTLIDK
Ga0066905_1011424281	3300005713	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0066903_1014606262	3300005764	Tropical Forest Soil	MNEHNYGTHLIKFKADRTADENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0066903_1029341741	3300005764	Tropical Forest Soil	MNKHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0066903_1034901362	3300005764	Tropical Forest Soil	MNELRYGTHLIKFNAERTSDGIYWLGKAHVQYNHGGMLRCFEVHGPAETFNSKEAAEQHVLGLAKTLIDKFI*
Ga0066903_1061583002	3300005764	Tropical Forest Soil	MNEQRYGTHPIKFKAEQTPDGIYWLGKAHVQYKNGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDKFI*
Ga0081455_1004469010	3300005937	Tabebuia Heterophylla Rhizosphere	LRKPDNMNEHNYGTHLIKFKAERTPDENYWIGKAHVQYNDGRTLRCFEVHGAAGKFKSKEAAEQHILGLAKTLIDKFI*
Ga0081455_101949713	3300005937	Tabebuia Heterophylla Rhizosphere	MNEHKYGTHLIKFKADRTPDENCWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLTLAKTLVDNFI*
Ga0081455_104109172	3300005937	Tabebuia Heterophylla Rhizosphere	MNEHNYGTHLIKFRADLTPDGTYWIGKAHVQYNHGRTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIDNFI*
Ga0081455_106576972	3300005937	Tabebuia Heterophylla Rhizosphere	MNEHHYGTHLIKFKADRTPPGNYWIGKAHVQYNNGKTLRCFEVHGPAEKFDSKEAAEQHVLSLAKTLIDKFI*
Ga0081538_100873403	3300005981	Tabebuia Heterophylla Rhizosphere	MNEHHYGTHLIKFKAARTPDGNYWIGKAHVQYNHGRIVRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0081538_102156112	3300005981	Tabebuia Heterophylla Rhizosphere	MNEHYYGIHLIKFKADRIPPGNYWIGKAHVQYNNGRTLRCFEVHGPAERFDSKEAAEWYVLNLAKTLIDKFI*
Ga0081540_11169643	3300005983	Tabebuia Heterophylla Rhizosphere	MNELRYGTHLIKFNAEQTPDGIYWLGKAHVQYKNGRMLRCFEVYGPAQKFDSKEAAEQHILGLAKTLIDKFI*
Ga0075417_100429814	3300006049	Populus Rhizosphere	MNAHKYGTHLIRFRADRTPDGNYWIGKADVQYSHGKTLRCFEVHAPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0075432_100780483	3300006058	Populus Rhizosphere	MNAHKYGTHLIRFRADRTPDGNYWIGKANVQYSHGKTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0075428_1019654731	3300006844	Populus Rhizosphere	MNEHNYGTHLIKLQADQTPDANYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILRLAKTLINNFI*
Ga0075433_103784062	3300006852	Populus Rhizosphere	MNEHNYGTHLIKLQADQTPDAKYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILRLAKTLINNFI*
Ga0075433_117867222	3300006852	Populus Rhizosphere	MNAHKYGTHLIKLRADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0075433_118948371	3300006852	Populus Rhizosphere	MNEHNYGTHLIKFKAERTPDGNYWIGKAHVQYNHGRTHRCFEVHGPAEKFDSKEAAEQHVLRLAKTLIDN
Ga0075434_1013283181	3300006871	Populus Rhizosphere	MNEHNYGTHLIKFKAERTPDGNYWIGKAHVQYNHGRTHRCFEVHGPAEKFDSKEAAEQHVLRLAKTLIDNFI*
Ga0075429_1004456341	3300006880	Populus Rhizosphere	MNEHNYGTHLIKLQADQTPDANYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILGLAKTLINNFI*
Ga0099791_103052662	3300007255	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGKTLRCFEMHGPAEKFDSKEAAEQHVLGVAKTLIDNFI*
Ga0105098_100120734	3300009081	Freshwater Sediment	MNEHNYGIHLIKFKADQTPHGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0075418_124763942	3300009100	Populus Rhizosphere	MNAHKYGTHLIRFRADRTPEGNYWIGKADVQYSHGKTLRCFEVHAPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0114129_104865043	3300009147	Populus Rhizosphere	MNEHNYGTHLIKLQADQTPDAKYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILGLAKTLINNFI*
Ga0105092_101596033	3300009157	Freshwater Sediment	MNEHNYGTHLIKFKADLTPDGTYWIGKAHVQYNHGKTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIDNFI*
Ga0105092_102512891	3300009157	Freshwater Sediment	MKEHNYGIHLIRFKADRTDHGNYWIGKAHVQYSHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNF
Ga0126374_100186934	3300009792	Tropical Forest Soil	MNEHNYGTHLIKFKAVRTLDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEQHVLALAKTLIDKFI*
Ga0126374_100724013	3300009792	Tropical Forest Soil	MNEHNYGTHLIKFKAERTPGENYWIGKAHVQYNDGRTLRCFEVHGAAGKFKSKEAAEQHILGLAKTLIDKFI*
Ga0105061_10630781	3300009807	Groundwater Sand	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHCETLRCFEVHGPAEKFDSKEAAEQHVLGLAKALIDNFI*
Ga0105088_10063012	3300009810	Groundwater Sand	MSEHKHGTHLIKFKADRTSDGNYWIGKAHVQYNHGKIGRCFEVHGPAGKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0105072_11189922	3300009818	Groundwater Sand	FKEPGNMSEHKHGTHLIKFKADRTSDGNYWIGKAHVQYNHGKIGRCFEVHGPAGKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0126380_104684751	3300010043	Tropical Forest Soil	NMNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126384_114644972	3300010046	Tropical Forest Soil	MNEHNYGIHRIKFKADRAPDGNYWIGKAHVQYNHGRMLRCFEVHGPAETFNSKEAAEQHVLGLAKTLIDKFI*
Ga0126382_101511381	3300010047	Tropical Forest Soil	MSEHNYGTHLIKFKADRIPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126382_122265292	3300010047	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFYSKEAAEEHV
Ga0126370_100579661	3300010358	Tropical Forest Soil	MNELQYGTHLIKFNAEQTPDGIYWLGKAHVQYNHGKMLRCFEVHGPAETFDSKEAAEQHVLGLAKTLIDKFI*
Ga0126370_119826141	3300010358	Tropical Forest Soil	NEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGTTLRCFEVHGPAGTFNSKEAAEKHILALAKTLIDNSI*
Ga0126376_102995732	3300010359	Tropical Forest Soil	MNAHNYGTHLIKFKADRAPDGNYWIGKAHVQYKNGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDKFI*
Ga0126372_100459093	3300010360	Tropical Forest Soil	MNEHNYGTHLIKFKAVRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEQHVLALAKTLIDKFI*
Ga0126372_101120265	3300010360	Tropical Forest Soil	RKPGNMNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGTTLRCFEVHGPAGTFNSKEAAEKHILALAKTLIDNSI*
Ga0126378_116002981	3300010361	Tropical Forest Soil	RKPGNMNEHNYGTHLIKFKADRTPDENYWIGEAYVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126377_106100514	3300010362	Tropical Forest Soil	LRKPSNMNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126377_116609911	3300010362	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126377_125507561	3300010362	Tropical Forest Soil	MNELRYGTHLIKFNAERTSDSIYWLGKAHVQYNNGRMLRCFEVHGPAEKFDSKEAAEQHV
Ga0126377_135481822	3300010362	Tropical Forest Soil	MNELMYGTHLVKFNAERTPDGIYWLGKAHVQYKNGRMLRCFEVHGPAETFDSKDAAEQHVLGLAKTLIDKFI*
Ga0126379_104716764	3300010366	Tropical Forest Soil	MNEHNYGTHLIKFKADRTPDKNYWIGKAHVQYNDGTTLRCFEVHGPAGTFNSKEAAEKHILALAKTLIDNSI*
Ga0126379_111336323	3300010366	Tropical Forest Soil	EHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126379_136010531	3300010366	Tropical Forest Soil	NYGTHLIKFKADRTPDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0126381_1001676602	3300010376	Tropical Forest Soil	MNEHNYGTHLIKFKAVRTLDENYWIGKAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEQHVLVLAKTLIDKFI*
Ga0137431_11764541	3300012038	Soil	PIMNEHNYGTHLIKFKADQTPHGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0137365_107091882	3300012201	Vadose Zone Soil	VNEHHYGTHLIKFKADRTPDRNYWIGKAHVQYNHGKTLRCFEVHGPAEKFNSKEAAEQHVLGLAKILIDNFI*
Ga0137363_101794814	3300012202	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0137362_105995201	3300012205	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAEKFDSKEAAEQHVLRLAKTLIDNFI*
Ga0137367_111014291	3300012353	Vadose Zone Soil	MNAHKYGTHLIKLRADRTPDGNYWIGKAHVQYNHGKTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0137366_103214382	3300012354	Vadose Zone Soil	MNEHHYGTHLIKFKADRTPDRNYWIGKAHVQYNHGKTLRCFEVHGPAEKFNSKEAAEQHVLGLAKILIDNFI*
Ga0137360_100316983	3300012361	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0137397_100616482	3300012685	Vadose Zone Soil	MNVHNYGTHLIKLQADQTPDANYWVGKAYVQYNDGMKLRCFEVHGPAKQFYSKEAAEQHILGLAKTLINNFI*
Ga0137394_100273483	3300012922	Vadose Zone Soil	MNVHNYGTHLIKLQADQTPDANYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILGLAKTLINNFI*
Ga0137394_100863292	3300012922	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGKTLRCFEVHGPAEKFDSKEAAEQHVLGVAKTLIDNFI*
Ga0137394_101969081	3300012922	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGKFSSKEAAEEHVLGLAKTLIDKFI*
Ga0137359_102413502	3300012923	Vadose Zone Soil	MNEHHYGTHLIKFKADRTPDGNYWIGKAHIQYHHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0126375_110495642	3300012948	Tropical Forest Soil	MNELRYGTHLIKFNAEQTPDGIYWLGKAHVQYKNGRMLRCFEVHGPAETFDSKEAAERHVLGLAKTLIDKFI*
Ga0164301_112805641	3300012960	Soil	MNEHHYGTHLINFKADRTPDGNYWIGKAHIQYNHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI*
Ga0126369_104861223	3300012971	Tropical Forest Soil	TLRKPGNMNEHNYGTHLIKFKAERTPGENYWIGKAHVQYNDGRTLRCFEVHGAAGKFKSKEAAEQHILGLAKTLIDKFI*
Ga0126369_111569903	3300012971	Tropical Forest Soil	HLIKFKADRTPDENYWIGEAHVQYNDGRTLRCFEVHGPAGTFNSKEAAEEHVLALAKTLIDKFI*
Ga0120188_10568391	3300013760	Terrestrial	AKAPGRLILHFESVTNMNEHHYGTHLIKFKAERPPHGNYWIGKAHVQYNNGRTFRCFEVHGPAEKFDSKEATEAYVLNLAKTLIDKFI*
Ga0182035_104834511	3300016341	Soil	QSDLTFRESSSMNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0182034_104103011	3300016371	Soil	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0182040_115412691	3300016387	Soil	HLIKSKADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0187773_104944991	3300018064	Tropical Peatland	MNEHHYGTHLIKFKADQTPDENYWIGKAHVQYNDGRALRCFEVHGPAEKFDSKEAAEQHVLGLAKRLIDNFI
Ga0137408_13957332	3300019789	Vadose Zone Soil	MNEHNYGTHLIKFKADRTPDGNYWIGKAHVQYNHGKTLRCFEMHGPAEKFDSKEAAEQHVLGVAKTLIDNFI
Ga0210407_110352832	3300020579	Soil	MNEHHYGTHLIKFKADRTPDGNYWIGKAHIQYNHGRMLRCFEVYGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0126371_105086822	3300021560	Tropical Forest Soil	MNEHNYGTHLIKFKAERTPGENYWIGKAHVQYNDGRTLRCFEVHGAAGKFKSKEAAEQHILGLAKTLIDK
Ga0207646_106706972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNEHHYGTHLIKFKANRTPDGNYWIGKAHIQYNHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0209846_10313882	3300027277	Groundwater Sand	MSEHKHGTHLIKFKADRTSDGNYWIGKAHVQYNHGKIGRCFEVHGPAGKFDSKEAAEQHVLGLAKTLIDNFI
Ga0209819_100438101	3300027722	Freshwater Sediment	MNEHNYGTHLIKFKADLTPDGTYWIGKAHVQYNHGKTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIDNFI
Ga0209819_100869402	3300027722	Freshwater Sediment	MNEHNYGIHLIKFKADQTPHGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0209465_104043302	3300027874	Tropical Forest Soil	MNELRYGTHLIKFNAERTPDGIYWLGKAHVQYNHGKMLRCFEVHGPAETFDSKEAAEQHVLGLAKTLIDKFI
Ga0209481_102895611	3300027880	Populus Rhizosphere	MNAHKYGTHLIRFRADRTPDGNYWIGKADVQYSHGKTLRCFEVHAPAEKFDSKEAAEQHV
Ga0209382_109196522	3300027909	Populus Rhizosphere	MNAHKYGTHLIRFRADRTPDGNYWIGKANVQYSHGKTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0307469_100340125	3300031720	Hardwood Forest Soil	MNEHNYGTHLIKLQADQTPDAKYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILRLANTLINNFI
Ga0307469_104659191	3300031720	Hardwood Forest Soil	MNEHNYGTHLIKFRADLTPDGTYWIGKAHVQYNHGRTRRCFEVHGPAEKFDSKEAAEQHVLGMAKTLIENFI
Ga0307468_1011787292	3300031740	Hardwood Forest Soil	MNEQQYGTHLIRFNAKRTPDGTFWLGKAHVQYNHGRILRCFEVHGPAEKFDSKEAAEQHVLGVAKTLIDNFI
Ga0307468_1024560371	3300031740	Hardwood Forest Soil	AAHMNEHNYGTHLIKFRADLTPDGTYWIGKAHVQYNHGRTRQCFEVHGPAEKFDSKEAAEQHVLGMAKTLIENFI
Ga0307470_106766632	3300032174	Hardwood Forest Soil	MNEHNYGTHLIKLQADQTPDAKYWVGKAYVQYNDGKKLRCFEMHGPAKQFYSKEAAEQHILRLA
Ga0307471_1000157564	3300032180	Hardwood Forest Soil	MNEHNYGTHLIKLQADQTPDAKYWVGKAYVQYNDGKKLRCFEVHGPAKQFYSKEAAEQHILRLAKTLINNFI
Ga0307471_1035275001	3300032180	Hardwood Forest Soil	YGTHLIKFKADRTPDGNYWIGKAHVQYNHGKTLRCFEVHGPAEKFDSKEAAEQHVLGVAKTLIDNFI
Ga0307472_1012098262	3300032205	Hardwood Forest Soil	MNEHHYGTHLIKFKADRTPDGNYWIGKAHIQYNHGRMLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI
Ga0306920_1009248343	3300032261	Soil	MNEHNYGTQLIKSKADRTPDGNYWIGKAHVQYNHGRTLRCFEVHGPAEKFDSKEAAEQHVLGLAKTLIDNFI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088453

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences