Metagenome Family F088663

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088663
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	148 residues
Representative Sequence	MLLLPALTGNASCQAQEKANVLPETQAGREIVVELEELGPVEHNRRIHTTNLHVLFRMKSFEIGDFKLYGGLTVSRARGTISYRTGSFEAGTLRDESFDSNASGAGPVLAARVELARSGNVSASLDGSAGVLLYDRDF
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.18 %
% of genes near scaffold ends (potentially truncated)	98.17 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.165 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.697 % of family members)
Environment Ontology (ENVO)	Unclassified (55.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 52.41% Coil/Unstructured: 47.59%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02557	VanY	44.95
PF06144	DNA_pol3_delta	7.34
PF13673	Acetyltransf_10	3.67
PF13302	Acetyltransf_3	2.75
PF08264	Anticodon_1	0.92
PF01370	Epimerase	0.92
PF01928	CYTH	0.92
PF04390	LptE	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	44.95
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	44.95
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	7.34
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	7.34
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.84 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	67.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	12.84 %
Unclassified	root	N/A	1.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	55.96 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	11.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Unclassified	root	N/A	1.83 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.92 %
Firmicutes sensu stricto incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.96 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	11.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Unclassified	root	N/A	1.83 %
Hydrogenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora	0.92 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.96 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	8.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Selenomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae	3.67 %
Unclassified	root	N/A	1.83 %
Hydrogenispora ethanolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora → Hydrogenispora ethanolica	0.92 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.96 %
Acetonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema	6.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Selenomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas	3.67 %
Unclassified	root	N/A	1.83 %
Pelosinus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Pelosinus	0.92 %
Sporomusa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa	0.92 %
Hydrogenispora ethanolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora → Hydrogenispora ethanolica	0.92 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.96 %
Acetonema longum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	6.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Selenomonas artemidis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas artemidis	1.83 %
Selenomonas ruminantium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	1.83 %
Unclassified	root	N/A	1.83 %
Pelosinus fermentans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Pelosinus → Pelosinus fermentans	0.92 %
unclassified Sporomusa	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa	0.92 %
Hydrogenispora ethanolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora → Hydrogenispora ethanolica	0.92 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	55.96 %
Acetonema longum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	6.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.50 %
Selenomonas artemidis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas artemidis	1.83 %
Selenomonas ruminantium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	1.83 %
Unclassified	root	N/A	1.83 %
Sporomusa sp. KB1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa → Sporomusa sp. KB1	0.92 %
Pelosinus fermentans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Pelosinus → Pelosinus fermentans	0.92 %
Hydrogenispora ethanolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora → Hydrogenispora ethanolica	0.92 %
Francisellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10145786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	632	Open in IMG/M
3300005172\|Ga0066683_10168941	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300005174\|Ga0066680_10317924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	993	Open in IMG/M
3300005176\|Ga0066679_10030002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2985	Open in IMG/M
3300005177\|Ga0066690_10049415	All Organisms → cellular organisms → Bacteria → Proteobacteria	2557	Open in IMG/M
3300005180\|Ga0066685_10893875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	594	Open in IMG/M
3300005181\|Ga0066678_10193782	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005181\|Ga0066678_10530559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	782	Open in IMG/M
3300005186\|Ga0066676_10747658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	665	Open in IMG/M
3300005446\|Ga0066686_10160300	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300005447\|Ga0066689_10821069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	577	Open in IMG/M
3300005451\|Ga0066681_10155000	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300005553\|Ga0066695_10579430	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005553\|Ga0066695_10825292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	533	Open in IMG/M
3300005554\|Ga0066661_10672916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Sporomusa → unclassified Sporomusa → Sporomusa sp. KB1	609	Open in IMG/M
3300005555\|Ga0066692_10854210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	558	Open in IMG/M
3300005555\|Ga0066692_10920583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Acetonema → Acetonema longum	535	Open in IMG/M
3300006032\|Ga0066696_10632697	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006034\|Ga0066656_11108930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae → Pelosinus → Pelosinus fermentans	509	Open in IMG/M
3300006791\|Ga0066653_10062909	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300006796\|Ga0066665_10158633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1723	Open in IMG/M
3300006796\|Ga0066665_10715884	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300007255\|Ga0099791_10096075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1360	Open in IMG/M
3300007255\|Ga0099791_10340112	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300007258\|Ga0099793_10288107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	797	Open in IMG/M
3300009012\|Ga0066710_103722989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300009012\|Ga0066710_104087985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Firmicutes sensu stricto incertae sedis → Hydrogenispora → Hydrogenispora ethanolica	545	Open in IMG/M
3300009088\|Ga0099830_10054517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2833	Open in IMG/M
3300009089\|Ga0099828_10405622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1229	Open in IMG/M
3300009137\|Ga0066709_101954855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	814	Open in IMG/M
3300009137\|Ga0066709_102321535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Francisellaceae	734	Open in IMG/M
3300009137\|Ga0066709_103925159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	540	Open in IMG/M
3300009143\|Ga0099792_10096108	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300009147\|Ga0114129_13318697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300010159\|Ga0099796_10043813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1526	Open in IMG/M
3300010323\|Ga0134086_10122677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	932	Open in IMG/M
3300010326\|Ga0134065_10053194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1253	Open in IMG/M
3300010329\|Ga0134111_10362752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	614	Open in IMG/M
3300010329\|Ga0134111_10390637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300010329\|Ga0134111_10399958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300011270\|Ga0137391_10111142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2376	Open in IMG/M
3300012189\|Ga0137388_10251487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1609	Open in IMG/M
3300012198\|Ga0137364_10991235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	635	Open in IMG/M
3300012202\|Ga0137363_10562718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	961	Open in IMG/M
3300012202\|Ga0137363_11103382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	674	Open in IMG/M
3300012203\|Ga0137399_10415605	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300012203\|Ga0137399_11723526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300012207\|Ga0137381_10414020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1176	Open in IMG/M
3300012207\|Ga0137381_10846229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	792	Open in IMG/M
3300012209\|Ga0137379_11016273	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300012285\|Ga0137370_10373600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	861	Open in IMG/M
3300012285\|Ga0137370_10905062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	545	Open in IMG/M
3300012359\|Ga0137385_10167406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1929	Open in IMG/M
3300012361\|Ga0137360_10489746	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300012362\|Ga0137361_10665081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	953	Open in IMG/M
3300012362\|Ga0137361_11101975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	715	Open in IMG/M
3300012683\|Ga0137398_11116628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	542	Open in IMG/M
3300012685\|Ga0137397_11127638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300012917\|Ga0137395_10626798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	777	Open in IMG/M
3300012917\|Ga0137395_11052755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	580	Open in IMG/M
3300012917\|Ga0137395_11255052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300012924\|Ga0137413_11781347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	508	Open in IMG/M
3300012925\|Ga0137419_10398337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1075	Open in IMG/M
3300012927\|Ga0137416_12179334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300012930\|Ga0137407_10120034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2283	Open in IMG/M
3300012930\|Ga0137407_11302576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	690	Open in IMG/M
3300012944\|Ga0137410_11543325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	580	Open in IMG/M
3300012976\|Ga0134076_10402549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	610	Open in IMG/M
3300014166\|Ga0134079_10304545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	709	Open in IMG/M
3300015053\|Ga0137405_1256482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1165	Open in IMG/M
3300015245\|Ga0137409_11091014	Not Available	637	Open in IMG/M
3300015358\|Ga0134089_10039984	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300017654\|Ga0134069_1068094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1134	Open in IMG/M
3300017657\|Ga0134074_1030743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1791	Open in IMG/M
3300017659\|Ga0134083_10283908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699	Open in IMG/M
3300017997\|Ga0184610_1155725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	752	Open in IMG/M
3300018071\|Ga0184618_10119244	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300018076\|Ga0184609_10006948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4050	Open in IMG/M
3300018433\|Ga0066667_11591534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	581	Open in IMG/M
3300018433\|Ga0066667_11754728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	559	Open in IMG/M
3300026277\|Ga0209350_1063991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1043	Open in IMG/M
3300026298\|Ga0209236_1143049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1023	Open in IMG/M
3300026306\|Ga0209468_1105418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	892	Open in IMG/M
3300026313\|Ga0209761_1278885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	601	Open in IMG/M
3300026313\|Ga0209761_1333824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300026320\|Ga0209131_1231184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	795	Open in IMG/M
3300026323\|Ga0209472_1247212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300026324\|Ga0209470_1048088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2070	Open in IMG/M
3300026326\|Ga0209801_1228588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	724	Open in IMG/M
3300026327\|Ga0209266_1078698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1506	Open in IMG/M
3300026328\|Ga0209802_1234673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	652	Open in IMG/M
3300026329\|Ga0209375_1019086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3972	Open in IMG/M
3300026333\|Ga0209158_1297508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas artemidis	555	Open in IMG/M
3300026335\|Ga0209804_1034431	All Organisms → cellular organisms → Bacteria → Proteobacteria	2550	Open in IMG/M
3300026342\|Ga0209057_1247730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300026529\|Ga0209806_1063686	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300026532\|Ga0209160_1211775	Not Available	699	Open in IMG/M
3300026538\|Ga0209056_10722775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300026540\|Ga0209376_1150773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1114	Open in IMG/M
3300026548\|Ga0209161_10169072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1246	Open in IMG/M
3300026548\|Ga0209161_10475146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	551	Open in IMG/M
3300027383\|Ga0209213_1084409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	592	Open in IMG/M
3300027616\|Ga0209106_1050758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	925	Open in IMG/M
3300027643\|Ga0209076_1031332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1481	Open in IMG/M
3300027643\|Ga0209076_1196180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas artemidis	555	Open in IMG/M
3300027862\|Ga0209701_10593179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300027903\|Ga0209488_10829089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	653	Open in IMG/M
3300028771\|Ga0307320_10380227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas → Selenomonas ruminantium	565	Open in IMG/M
3300031820\|Ga0307473_10525568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.33%
Aquatic	Environmental → Aquatic	2.75%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.33%
Sediment	Environmental → Aquatic → Sediment	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Loam	Environmental → Terrestrial → Soil → Loam	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.09%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_101457861	3300002560	Grasslands Soil	MLLLPALTGNASCQAQEKANVLPETQAGREVMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTITRRTGSSVAGTLKDETFDSAATGAGPVLGIRAEFAPSGNVSASLDGSAGVLLYDRDFPAGASRYAFMF
Ga0066683_101689412	3300005172	Soil	MLLIPPLTGNTSCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASGAGPVLAARVEIGRSGNVSASVEGSAGVLLYDRDF
Ga0066680_103179242	3300005174	Soil	MRYPRASWTCPTPAMLSMLLLPALSGNALCHAQERANALPETQAGREMIVEVQELIPVESDRKIRTANLDVLFRIRTFDTPDFKFHGGLTVSHSRGSITRQTGSFQAGTLRDEAYDSTATGA
Ga0066679_100300021	3300005176	Soil	VRYPHSSRKRPTAAVLSLLLLPALSGNASCEPQEKANILQETQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFKTGSADAGTLKDEAFDSAATGAGPVLAIRTEFARSGNASASLDGSAGVLLYDRDF
Ga0066690_100494155	3300005177	Soil	MLLLPALTGNASCQAQEKANVLPETQAGREIVVELEELGPVEHNRRIHTTNLHVLFRMKSFEIGDFKLYGGLTVSRARGTISYRTGSFEAGTLRDESFDSNASGAGPVLAARVELARSGNVSASLDGSAGVLLYDRDF
Ga0066685_108938751	3300005180	Soil	SLTPTASETMRYPRASWTCPTPAVLSMLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDSGVCKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYTLNGGQELSVTLRG
Ga0066678_101937821	3300005181	Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDSGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAG
Ga0066678_105305591	3300005181	Soil	VRYPHSSRKRPAAAVLSLLLLPALSGNASCEAQEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFPMKSFDIGMFKLYGGLTLSRARGNISFRTGSAEAGTLKDEAFGSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAG
Ga0066676_107476581	3300005186	Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLFRMKSLDIGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMFRYGSTLSY
Ga0066686_101603003	3300005446	Soil	MLLFPALTGNASCQAQEEANVLPETQAGREIVVELEELGPIKRNRQIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSLEAGTLIDKSYDSTASGAGPVLAARVGLARSGNVSASLDGSAGVLLYDRDFPAGASRYE
Ga0066689_108210691	3300005447	Soil	LLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLFRMKSLDIGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMF
Ga0066681_101550002	3300005451	Soil	MLLIPPLTGNASCRAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSVEAGTLKDETFDSTASGAGPVLAARVELGRSGNVSASVEGSAGVLLYDRDFPARASRYEFMLRIGPTLSYRLNDTQDLSLTF
Ga0066695_105794301	3300005553	Soil	MLLFAALTGNASCQAQEKANISQGMQAGREIMVELEELGPVRRNRQIHTMNLHFLFRMKSFDIGMFKLYGGLTLSRARGNISFTTGSAEAGTLMDEVFDGAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPGAGASRYEFMFRYGPTLSYRLNDRQELSVTL
Ga0066695_108252921	3300005553	Soil	RASWTCPTPAVLSMLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDSGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMFRYGSTLSYTLNGGQE
Ga0066661_106729161	3300005554	Soil	VSFSRIRRGIRTVMTMNRGTGASVRMRSNRRLKIIVLSMLLLPAVCGNASCRAQEKGNTVPETQAGQEMIVEVQELVPIESDRSIRTTNLDVLFRIRNFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASTATGAGPVLAIQTELARSGNLSASLHGSAGVLLYDRDFPGGASRYEFMLRYGPTVSYRLNDRQD
Ga0066692_108542101	3300005555	Soil	PTASQAMRHPRARWTCPAPAVLSMLLLPALTGNASCQAQEEANVLPETQAGREIVVELEELGLIKRNRQIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSLEAGTLIDKSYDSTASGAGPVLAARVGLARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLNDRQ
Ga0066692_109205831	3300005555	Soil	PTASQAMRHPRARWTCPAPAVLSMLLLPALTGNASCQAQEKANVLPETQAGREVMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTIMRRTGSSAAGTLKDETYDSAATGAGPVLGIRAEFAHSGNVSASLDGSAGVLLYDRDFPAGASRYAFMFRYGPTL
Ga0066696_106326972	3300006032	Soil	VRYPHSSRKRPTAAVLSLLLLPALSGNASCEAQEKANISQEMQAGREIMAELEELGPVKRNRQIHTMNLHFLFRMKSFDIGMFKLYGGLTLSRARGNISFTTGSAEAGTLMDEVFDSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPGAGASRYEFMFRYGPTLSYRLNDR
Ga0066656_111089301	3300006034	Soil	TIRMVTIMNRGTGASGRLRPNPKAAILSMLLFTALTGNASCQAQEKANISQEMQAGREIMVELEELGPVKRNRQIHTMNLHFLFPMKSFDIGMFKLYGGLTLSRARGNISFRTGSAGAGTLKDEAFDSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAG
Ga0066653_100629091	3300006791	Soil	MLLIPPLTGNASCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSFDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASGAGPVLAARVELARSGNVSASVEGSAGVLLYDRDFPAGASR
Ga0066665_101586331	3300006796	Soil	MIYPRASWTCPTPATLSMLLLPALSGNALCHAQERANALPETQAGREMIVEVQELIPVESDRKIRTANLDVLFRIRTFDTPDFKFHGGLTVSHSRGSITRQTGSFQAGTLRDEAYDSTATGA
Ga0066665_107158841	3300006796	Soil	MRHPRARWTCPAPAVLSMLLLPALTGNASCQAQEEANVLPETQAGREIVVELEELGPIKRNRQIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASAAGPVLAARVELG
Ga0099791_100960751	3300007255	Vadose Zone Soil	MLLLPALTGNASCQAQEKANVLPEMQAGREIMVELQEFGPVERNRKIRTTNLDFLFRIKRFDTPDFKFYGGLTVSRARGTISYRTGSLEAGTLKDETFDSAATGAGPVLAIRAELARNGNLSVSLDGSAGVLLYDRDFPAGASRYEFMLRYGPTL
Ga0099791_103401122	3300007255	Vadose Zone Soil	MLSILLLQALSGNASCQAQEKANVFQETQAGREIVAELQELGPVERARKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGTITRRTGSFQAGTLMDETLDSTATGAGPVLAIRAEFARSGNVSASLDGSAGVLLYDRDFPA
Ga0099793_102881071	3300007258	Vadose Zone Soil	MLSMLLLQVLSGNASCHAQEKTNVLPETQAGRQIMLELQELGPVENNRKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGGITRRTGSFQAGTLMDETLDSTATGAGP
Ga0066710_1037229891	3300009012	Grasslands Soil	MLLLPALTGNASCQAQEKANVLAETHAGREIMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTITRRTGSSAAGTLKDETFDSAATGAGPVLGIRAEFAPSGNVSASLDGSAGV
Ga0066710_1040879851	3300009012	Grasslands Soil	LVLQGELRSNERLKITARSGWTRPAAALLSMLLLPALSGNASCQERASALPGREMIVEVQELIPVESDRKIRTANLDVLFRIRTFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASTATGAGPVLAVQAELARSGNLSASLHGSAGVLLYDRDFPGGASRYEFMLRYGPTVS
Ga0099830_100545175	3300009088	Vadose Zone Soil	MLLLPALTGNASCQAQEKANVLPEMQAGREIMVELQEFGPVERNRKIRTTNLDFLFRIKRFDTPDFKFYGGLTVSRARGTISYRTGSFEAGTLRDKSYYSTASGAGPVLAARLELAHSGNVSASLDGSAGVLLYDRDFPAGASRYEFM
Ga0099828_104056221	3300009089	Vadose Zone Soil	MLLIPALTGNASCQAQERANVFPKVQAGREIVVELEELWPIERNRQIHTTNLHVLFRMKSFDIGDLKLYGGLTVSRARGTISYRTGSFEAGTLRDEIFESPATGAGPVLAARVELARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLNDRQVLSLTLRGMHISSGQ
Ga0066709_1019548551	3300009137	Grasslands Soil	MLLLPALTGNASCQAQEKANVLPETQAGREIVVELEELGPIKRNRQIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSLEAGTLIDKSYDSTASGAGPVLAARVGLARSGNVSASLDGSAGVLLYDRDFPAGAS
Ga0066709_1023215352	3300009137	Grasslands Soil	MLLFAALTGNASCQAQEKANISQEMQAGREIMVELEELGPVKRNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTVSRARGNISFRTGSAEAGTLKDEAFDSAATGAGPVLAIRTEFAHSGN
Ga0066709_1039251592	3300009137	Grasslands Soil	MGSNRRLKIIVLSMLLLPAVCGNASCRAQEKGNTVPETQAGQEMIVEVQELVPIESDRSIRTTNLDLLFRIKDFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASTATGAGPVLAIQTEL
Ga0099792_100961084	3300009143	Vadose Zone Soil	MLSILLLQALSGNASCQAQEKANVFQETQARGEIVAELQELGPVERARKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDETLDSTATGAGPVLAIRAEFARSGNVSASLDGSAGVLLY
Ga0114129_133186971	3300009147	Populus Rhizosphere	VALVLQAEAGSDERLKIATRARPTAAALSILLLPALSGNALSQAQESASASAETRAGQEMIVEVQELVPVESGRNIRTTNLDLLFRIRNFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASAATGAGPVLAVRAELARGRNLSASLTGSVGVLLYDRDFPAG
Ga0099796_100438134	3300010159	Vadose Zone Soil	MLLLQALSGNASCHAQENPNVLPETQAGRQIMLELQELGPVEGNRKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDEALDSTATGAGPVLAIRTEFA
Ga0134086_101226771	3300010323	Grasslands Soil	MLLIPPLNGNTSCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTSNLHFLFRMKSLDIGYFNLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELARSGKVSASVEGSAGVLLYDRDFPAGASRYE
Ga0134065_100531944	3300010326	Grasslands Soil	VLSLLLLPALSGNASCEAQEKANISQEMQAGREIMAELEELGPVKRNRQIHTMNLHFLFRMKSFDIGMFKLYGGLTLSRARGNISFTTGSAEAGTLMDEVFDGAASGAGPVLAIRTEFARSGNVSASLDGS
Ga0134111_103627522	3300010329	Grasslands Soil	MLLMPPLTGNASCQAQERANVLPKTQAAREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELGRSGNVSASVE
Ga0134111_103906372	3300010329	Grasslands Soil	MLLIPPLNGNTSCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTSNLHFLFRMKSLDIGYFNLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELARSGKVSASVEGSAGVLLYD
Ga0134111_103999581	3300010329	Grasslands Soil	MLLFAALTGNASCQAQDKANVLQETPAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTVSRARGNISFRTGSAEAGTLKDEAFDSAATGAGPVLAIRTEFAHSGNVSASLDGSAGVLLYDGDFPGAGASRYEFMFRYGPTLSYRLNDRQ
Ga0137391_101111424	3300011270	Vadose Zone Soil	MLLLPALTGNASCQAQEKANVLPEMQAGREIMVELQEFGPVERNRKIRTTNLDFLFRIKRFDTPDFKFYGGLTVSRARGTISYRTGSLEAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSASLDGSAGVLLYDRDFPAGASRYDFMFRYGPTLS
Ga0137388_102514873	3300012189	Vadose Zone Soil	MLLLPALTGNASCQAQEKANVLPEMQAGREIMVELQEFGPVERNRKIRTTNLDFLFRIKRFDTPDFKFYGGLTVSRARGTISYRTGSLEAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSA*
Ga0137364_109912352	3300012198	Vadose Zone Soil	MLLIPPLTGNASCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHATNLHLLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSNASGAGPVLAARVELGRSGNVSASVEGSAGVLLYDRDFPAGASR
Ga0137363_105627182	3300012202	Vadose Zone Soil	MLLFAALSGNASCQAQEKANVLPETQAGRQIMVELQELGPVESDRKIRTANFDFLFHIRRFDSPDFKFYGGLTVSRSRGAITRRTDSAGAGTLMDENLDSTATGAGPVLAIRA
Ga0137363_111033822	3300012202	Vadose Zone Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDIGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASLDGSAGVLLYDR
Ga0137399_104156052	3300012203	Vadose Zone Soil	MLLLTALSGNASCQAQEKANVLPETRAGREIIVELQELGPVEKTRQIHTVNLDLLFRIRRFDIPDFTFYGGFTVSRSRGNLTRRTGSSLAGTLEDETFDSAATGAGPVLAIRSEFARSGNVSASLDGSAGVLLYDRDFPAGASRYDFMFRYGPTLSYRLNDRQVWSLTLRG
Ga0137399_117235261	3300012203	Vadose Zone Soil	MLLLQALSGNASCQAQGKANVFQETQAGGEIVAELQELGPVERARKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDETLDSTATGAGPVLAIRTEFAQGGNVWASL
Ga0137381_104140203	3300012207	Vadose Zone Soil	MRAGREIVVELEELGPLEHNRKIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSAATGAGPVLAARVELARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFR
Ga0137381_108462291	3300012207	Vadose Zone Soil	VLSLLLLPALSGNASCEEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAGAGTLKDEAFDSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAGASRYE
Ga0137379_110162731	3300012209	Vadose Zone Soil	MLLIPALTGNASCQAQEKANVLPETQAGREIIVELEELGPIKDNRQVHTTNLHFLFRMKSFDIGVFKLYGGLTVSRARGTISYRTGSLEAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSASLDGSAGVLLYDRDFPARASRYEFMFRYGPTLSYRLN
Ga0137370_103736001	3300012285	Vadose Zone Soil	MLLIPPLTGNASCQAQERANALPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSFDIGYFKLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSNASGAGPVLAARVELGRSGNVSAS
Ga0137370_109050621	3300012285	Vadose Zone Soil	MLLIPPLTGNASCQAQERANVLPKTQAGREIVLELEMLGPIEGNRQIHATNLHLLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSNASGAGPVLAARVELGRSGNVSAS
Ga0137385_101674061	3300012359	Vadose Zone Soil	MLLFAALTGNASCQAQEKANVLRETPDGREITVELEELVPLERNRQIHTMNLHFLFRIKSFDIGVFKLYGGLTVSRARGNISFRTGSAEAGTLKDETFDSAAAGAGPVLAIRTEFAHS
Ga0137360_104897462	3300012361	Vadose Zone Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDIGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLN
Ga0137361_106650812	3300012362	Vadose Zone Soil	MLLLPALSGNALCHAQEKASALPETQAGREMIVEVQELVPVESDRKIRTTNLDLLLRIRRFDTPDFKFHGGFTVSRSRGSITRQTGSFQAGTLKNETYASTATGAGPVLAVRAEFA
Ga0137361_111019752	3300012362	Vadose Zone Soil	MLLFAALSGNASCQAQEKANVLPETQAGRQIMVELQELGPVESDRKIRTANFDFLFHIRRFDSPDFKFYGGLTVSRSRGAITRRTGSAGAGTLMDENLDS
Ga0137398_111166281	3300012683	Vadose Zone Soil	MLSILLLQALSGNASCQGQGKANVSQETQAQGEIIAELQELGPVERAHKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDETLDSTATGAGPVLAIRTEFAQGGNVWASL
Ga0137397_111276381	3300012685	Vadose Zone Soil	MLSMLLLQVLSGNASCHAQEKTNVLPETQAGRQIMLELQELGPVENNRKIRTTNLDVLFRIRRFDIPDFKFYGGLTVSHSRGGITRRTGSFQAGTLMDETLDSTATGAGPVLAIRTEFAQGGNVWAS
Ga0137395_106267981	3300012917	Vadose Zone Soil	MLSILLLQALSGNASCQGQGKANVSQETQAQGEIIAELQELGPVERAHKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDETLDSTATGAGP
Ga0137395_110527552	3300012917	Vadose Zone Soil	VLSLLLLPALSGNASCEAQENANIAQEMQAGREIMVELQELGPVERDRKIRTTNVDFLFHIRRFDSPDFKFYGGLTVSRSRGAITRRTGSLEAGTLMDENLDSTATGAGPVLAIRAEFPHSGNV
Ga0137395_112550521	3300012917	Vadose Zone Soil	MLLIPALIGNASCQAQEKANVLPETQTGREIIVGLEELGPTQNNRQIHTTNLDFLFRMKSFDIGVFTFYGGLTISRARGTISFRTGSLEAGTLKDEIFDSAATGAGPVLAIRAEFARSGNVSASLDGSAGV
Ga0137413_117813471	3300012924	Vadose Zone Soil	RLKITALSMLLLPALCGNASCHAQEKGNTVPETRPGREMIVEVQELIPVESDRKIRTTNLDLLFRIRTFDTPDFKFHGGLTVSHSRGTITRQTGSFEAGTLKNEKYDSTATGAGPVLAVQAELGRGRNLSTSLHGSAGVLLYDRDFPSGASRYDFMLRYGLTFSYGLND
Ga0137419_103983372	3300012925	Vadose Zone Soil	VLSILLLTALSGNASCQAQEKANVLPETQAGREIMVELQELGPVERIRQIHTANLDLLFRIRRFDTPDFTFYGGFTVSRSRGNLTRRTGSSEAGTLRDEPFDSAATGAGPVLAIRAEFAHSGNVSASLDGSAGVLLYD
Ga0137416_121793341	3300012927	Vadose Zone Soil	MLSILLLQALSGNASCQAQEKANVFQETQAGREIMVELQELGPVERARQIHTANLDLLFRIRRFDTPDFTFYGGFTVSRSRGNLARRTGSSEAGTLRDETLDSTATGAGPVLAIRTEFAHGGNVWASLDGNA
Ga0137407_101200341	3300012930	Vadose Zone Soil	MLLLPALTGNASCQAQEKANVLAETHAGREIMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTITRRTGSSVAGTLKDETFDSAATGAGPVLGIRAEFAHSGNVSASLDGSAGVLLYDRDFPAGASRYAFMFR
Ga0137407_113025761	3300012930	Vadose Zone Soil	LKITVLSMLLLPALCGNASCRAQEKGNTVPETQAGQEMIVEVQELVPIESDRSIRTTNLDLLFRIRNFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASTATGAGPVLAIRAELARGRNLSASLTGSVGALLYDREFPAGASRYEFMIRYGPTVSYRLNDRQDLSLTLR
Ga0137410_115433251	3300012944	Vadose Zone Soil	MRYPRPGWTRPTAAVLFLIPALTGNASCQAQEKTNVLPETQAGREITLELEELGPLERNRRIRTTNLHVLFRMKSFDIGVFKLWGGLTVSRARGTISYRTGSSEAGTLKDKTSDSVATGAGPLLAIRAELARNGNLSASLDGSAGVLLYDRDFPSGASRYEFMFRYGPTLSY
Ga0134076_104025491	3300012976	Grasslands Soil	MLLLPALTGNASCQAQEKANVLAETHAGREIMVELQELGPVERDRKIRTTNLDFLLRITRFDSPDFKFYGGLTVCRARGTITRRTGSVQAGTLRDETFDSAATGAGPVLGIRAEFAHSGNVSASLDGSAGVLLYDRDFPAGASRYAFMFRY
Ga0134079_103045451	3300014166	Grasslands Soil	LKIAALSMLLLPALCGNASCHAQEKGNTVPETRPGREMIVEVQELIPIESDRKIRTTNLDLLFRIRTFDIPAFKFHGGLTVSHSRGTITRQTGSSEAGTLKDERYDSTATGAGPVLAVQAELGRGRTLSTSLHGSAGVLLYDGDFPAGAS
Ga0137405_12564823	3300015053	Vadose Zone Soil	MLLLPALSGNALCHAQEKASALPETQAGREMIVEVQELVPVESDRKIRTTNLDLLLRIRRFDTPDFKFHGGFTVSRSRGSITRQTGSFQAGTLKNETYASTATGA
Ga0137409_110910141	3300015245	Vadose Zone Soil	MLLIPALTGNAPCQAQEKANALPEAQPRREIIVELQELGPIEDNRQIRTTNLDFLLHIKRFDNEGIKFYGGLTVSRARGNITRRTGSLNAGTLKDETFASAATGAGPVLAAR
Ga0134089_100399841	3300015358	Grasslands Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLFRMKSLDIGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGNVSASVDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLN
Ga0134069_10680941	3300017654	Grasslands Soil	MLLIPPLTGNASCQAQERANALPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFNLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELARSGKVSASVEGSAGVLLYDRDFPAGASR
Ga0134074_10307431	3300017657	Grasslands Soil	MLLMPPLTGNASCQAQERENVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEASTLKDETFDSTASGAGPVLAARVEIGRSGNVSASVEGSAGVLLYDRDFPAGASRYEFMLRIGPTLSYRL
Ga0134083_102839081	3300017659	Grasslands Soil	VLSMLLLPALAGNASCRAQESANVLPLKQAGREIMLELQEIGPVESDRKIRTTNLDFLLRITRFDSPDFKFYGGLTVCRARGTITRRTGSVQAGTLRDETFDSAATGAGPVLTIRAEFARSGDVSASLDGSAGVLLYTRDFPAGASRYEFMFR
Ga0184610_11557252	3300017997	Groundwater Sediment	MVTIMNRGTGASCRLRSNKRLKIAVLSMLLLPVLSGNASCQAQEKANVLPETQAGREITVEVQELVPVESDRKIRTTNLDFLFRIRRFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKDETYDSAATG
Ga0184618_101192441	3300018071	Groundwater Sediment	MNRGTGASGRLRSNKRLKITVLSMLLLPALSGNASCEAQEKANVLPETQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAEAGTLKDEAFESAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRHFPAGATRYEFMFRYGPTLSYRLNDRQELSV
Ga0184609_100069485	3300018076	Groundwater Sediment	MVTIMNRGTGASCRLRSNKRLKIAVLSMLLLPVLSGNASCQAQEKANVFPETQAGREIMVELQEFGPIERERRIRTTNLDFLFRIRSFDTPDFKFYGGLTVSRARGTITRWTGSSQAGTLKEETFDSAATGAGPVLAVRAEFARGGNLSASLDGSAGVLLYDRDF
Ga0066667_115915341	3300018433	Grasslands Soil	SVTASETVRHPHSSRKRPAAAVLSLLLLPALRGNASCEAQEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFPMKSFDIGMFKLYGGLTLSRARGNISFRTGSAEAGTLKDEAFGSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLNDRQELSVTL
Ga0066667_117547281	3300018433	Grasslands Soil	MLLLPALTGNASCQAQEKANVLPETQAGREIVVELEELGPVEHNRRIHTTNLHVLFRMKSFEIGDFKLYGGLTVSRARGTISYRTGSFEAGTLRDESFDSNASGAGPVLAARV
Ga0209350_10639911	3300026277	Grasslands Soil	VRYPHSSRKRPTAAVLSLLLLPALSGNASCEAQEKANISQEMQAGREIMAELEELGPVKRNRQIHTMNLHFLFRMKSIDIGMFKLYGGLTLSRTRGNISFTTGSAEAGTLMDEVFDSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPGA
Ga0209236_11430492	3300026298	Grasslands Soil	MLLLPALTGNASCQAQEKANVLAETHAGREIMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTITRRTGSSAAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSASLDG
Ga0209468_11054182	3300026306	Soil	MLLIPSLTGNASCEAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARV
Ga0209761_12788851	3300026313	Grasslands Soil	MLLLPALTGNASCQAQEKANVLAETHAGREIMVELQELGPVERDRKIRTTNLDFLFRVKRFDTPDFKFYGGLTVSRSRGTITRRTGSSVAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSA
Ga0209761_13338241	3300026313	Grasslands Soil	MLLFPALTGNASCQAQEEANVLPETQAGREIVVELEELGPIKRNRQIHTTNLHFLFRMKSFDIGDFKLYGGLTVSRARGTISYRTGSLEAGTLIDKSYDSTASGAGPVLAARVGLARSGNVSASLDGSAGVLL
Ga0209131_12311841	3300026320	Grasslands Soil	MAVEERGPLWFRSLVPGGESARLRIRTVALVLQVDRGLTPGDPTPTASETMRHPRASWTCPTPAVLSMLLLPALSGNALCHAQEKASALPETQAGREMIVEVQELVPVESDRKIRTTNLDLLFRIRRFDTPDFKFHGGFTVSRSRGSITRQTGSFQAGTLKNETYASTATGAGPVLAVRAELARRGNLSASLHGSAGVLLYDRDFPAGASRYDFMLRYGLTFSYRLNDRQDLSVTLRGMH
Ga0209472_12472121	3300026323	Soil	DCMGVSPAFFCLWQCPCSGATWKCRAAAVLSMLLIPPLTGNASCRAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELGRSGNVSASVEGSAGVLLYDRDFPARASRYEFMLRIGPTLSYR
Ga0209470_10480883	3300026324	Soil	MLLIPPLTGNASCQAQERENVLPKTQAGREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASAAGPVLAARVELGHSGNVAASVEGSAGVLLYDRDF
Ga0209801_12285881	3300026326	Soil	MLLLPALSGNASCQAQEKANVLPETQAAREIIVELEELGPIRGNRQIRTTNLHFLSRMKSLDSGVFKLYGGLTVSRARGTISYRTGSFEAGTLKNETFDSNAIGAGPVLAARVEFARSGN
Ga0209266_10786981	3300026327	Soil	MLLIPPLTGNTSCQAQERANVLPKTQAGREIVLELEKLGPIEGNRQIHTSNLHFLFRMKSLDIGYFNLYGGLTVSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELARSGKVSASVEGSAGVLLYDRDFPAGASRYEFMLRIGPTLSYRLNDMQDLALVFMRMHVPNGQGFNTHNPEYNASGFGVQFSGAF
Ga0209802_12346732	3300026328	Soil	VLSLLLLPALSGNASCEEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAGAGTLKDEAFDSAATGAGPVLAIRTEFARSGNLSVSLDGSAGVLLYDRTFPARASRYEFMFRFGP
Ga0209375_10190864	3300026329	Soil	MLLMPPLTGNASCQAQERANVLPKTQAAREIVLELEKLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTLSRARGTISYRTGSFEAGTLKDETFDSTASGAGPVLAARVELGRSGSVSASVEGS
Ga0209158_12975081	3300026333	Soil	HSSRKCPTAAVLSLLLLPALSGNASCEEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAGAGTLKDEAFDSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSYRLNDRQELSVTLRGMH
Ga0209804_10344311	3300026335	Soil	MRHPRARWTCPAPAVLSMLLLPALTGNASCQAQEKANVLPETQAGREIVVELEELGPVEHNRRIHTTNLHVLFRMKSFEIGDFKLYGGLTVSRARGTISYRTGSFEAGTLRDESFDSNASGAGPVLAARVELARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSY
Ga0209057_12477301	3300026342	Soil	VLSMLLIPPLTGNASCQAQERANVLPKTQAGREIVLELENLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASGAGPVLAARVEIGRSRNVSASVEGSAGVLLYDRDFPAGASRYEFMLRIGPTLSYRLNEMQDL
Ga0209806_10636864	3300026529	Soil	MNRGTGASGRLSSDSVTASETVRYPHSSRKRPAAAVLSLLLLPALSGNASCEAQEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFPMKSFDIGMFKLYGGLTLSRARGNISFRTGSAEAGTLKDEAFGSAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRDFPAGASRYEFMFRYGPTLSY
Ga0209160_12117752	3300026532	Soil	MNRGTGASGRLSSDSVTASETVRYPHSSRKRPAAAVLSLLLLPALSGNASCEAQEKANILQEMQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAGAGTLKDEAFDSAATGAGPVLAIRTEFARSGNVSASLDGSAG
Ga0209056_107227751	3300026538	Soil	WKCRAAAVLSMLLIPPLTGNASCQAQERANVLPETQAGREIVLELENLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASAAGPVLAARVELGRSGNVAASVEGSAGVLLYDRDFPAGASRYEFMFRIGPTLSY
Ga0209376_11507731	3300026540	Soil	MLLIPSLTGNASCEAQERANVLPKTQAGREIVLELENLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASAAGPVLAARVELGRSGNVAASVEGSAGV
Ga0209161_101690722	3300026548	Soil	MLLIPPLTGNASCQAQERANVLPKTQAGREIVLELENLGPIEGNRQIHTTNLHFLFRMKSLDIGYFKLYGGLTVSRARGTISYRTGSVEAGTLKDETFDSTASAAGPVLAARVELGRSGNVAASVEGSAGVLLYD
Ga0209161_104751461	3300026548	Soil	MGSNRRLKIIVLSMLLLPAVCGNASCRAQEKGNTVPETQAGQEMIVEVQELVPIESDRSIRTTNLDLLFRIKDFDTPDFKFHGGLTVSHARGTITRQTGSFQAGTLKEETYASTATGAGPVLAIQTELARSGNL
Ga0209213_10844091	3300027383	Forest Soil	MLLLPALTWNASCQAQEKANVLPETQAGREIIVELQELGPVERARQIHTVNLDLLFRIRRFDIPDFTFYGGFTVSRSRGNLTRRTGSFEAGTLRDEPFDSAATGAGPVLAIRSEFARSGNVSASVDGSVGVLLYD
Ga0209106_10507582	3300027616	Forest Soil	MRSNGRLKIAVLSMLLLPALCGNASCHAQEKGNTVPERRPGREMIVEVQELIPVESDRKIRTTNLDLLFRIRTFDTPDFKFHGGLTVSHSRGTITRQTGSFEAGTLKNEKYDSTATGAGPVLGA
Ga0209076_10313324	3300027643	Vadose Zone Soil	MLLLPALSGSSLCHAQEKASALPETQAGREMIVEVQELVPVESDRKIRTTNLDLLLRIRRFDTPDFKFHGGFTVSRSRGSITRQTGSFQAGTLKNETYASTATGAGPVLAVRAEFARRGNLSASLHGSAGVLLYDRDFPAGASRYEFMFRY
Ga0209076_11961801	3300027643	Vadose Zone Soil	SEAMRHPRARWTCPAPAVLSMLLLPALTGNAPCQAQEKANVLPETQAGREIMVELQEFGPVERNRKIRTTNLDFLFRIKRFDTPDFKFYGGLTVSRARGTISYRTGSLEAGTLKDETFDSAATGAGPVLAIRAEFAHSGNVSASLDGSAGVLLYDRDFPARASRYEFMFRYGPTLSYRLNDRQT
Ga0209701_105931791	3300027862	Vadose Zone Soil	MRYPRPSWTRATAAVLFLIPALTGNASCQAQEKANVLPETQAGRQIMLELQEFGPVERDRKIRTTNLDFLFHIGRFDSPDFKFYGGLTVSRSRGTITLRTGSVQAGTRRDENFDSTATGAGPVLAIRAELARSGNLSVSLD
Ga0209488_108290892	3300027903	Vadose Zone Soil	MRYPHSSRTRPTAAMLSILLLQALSGNASCQAQEKANVFQETQARGEIVAELQELGPVERARKIRTTNLDFLFRIRRFDIPDFKFYGGLTVSHSRGAITRRTGSFQAGTLMDETLDSTATGAGPVLAIRAEFARSGNVSASLDGSAGVLLY
Ga0307320_103802271	3300028771	Soil	NRGTGASGRLRSNKRLKITVLSMLLLPALSGNASCEAQEKANVLPETQAGREIMVELEELGPLERNRQIHTMNLHFLFRMKSFDIGVFKLYGGLTLSRARGNISFRTGSAEAGTLKDEAFESAATGAGPVLAIRTEFARSGNVSASLDGSAGVLLYDRHFPAGATRYEFMFRYGPTLSYRLNDRQELS
Ga0307473_105255681	3300031820	Hardwood Forest Soil	VALVLQGELRSNERLKITARSGRTRPAAALLSMLLLPALSGNALCLAQERASALPGREMIVEVQELAPVESDRKIRTTNLDLLFRIRKFDIPDFKFHGGLTVSHSRGTITRQTGSFQAGTLKDEKYESTATGAGPVLAVQAELGRGANLSTSLYG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088663

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences