NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F088665

Metagenome / Metatranscriptome Family F088665

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088665
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 98 residues
Representative Sequence AIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQKPKSFFGKSRSSPSM
Number of Associated Samples 80
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Archaea
% of genes with valid RBS motifs 20.18 %
% of genes near scaffold ends (potentially truncated) 70.64 %
% of genes from short scaffolds (< 2000 bps) 70.64 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (89.908 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(31.193 % of family members)
Environment Ontology (ENVO) Unclassified
(69.725 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(72.477 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 61.74%    β-sheet: 0.00%    Coil/Unstructured: 38.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF07978NIPSNAP 16.51
PF07690MFS_1 9.17
PF06197DUF998 6.42
PF03237Terminase_6N 3.67
PF01849NAC 2.75
PF00230MIP 2.75
PF07837FTCD_N 2.75
PF00248Aldo_ket_red 1.83
PF01022HTH_5 1.83
PF13580SIS_2 0.92
PF01966HD 0.92
PF08327AHSA1 0.92
PF13401AAA_22 0.92
PF00828Ribosomal_L27A 0.92
PF13414TPR_11 0.92
PF02749QRPTase_N 0.92
PF01638HxlR 0.92
PF06745ATPase 0.92
PF02678Pirin 0.92
PF13596PAS_10 0.92
PF02002TFIIE_alpha 0.92
PF01370Epimerase 0.92
PF01844HNH 0.92
PF10437Lip_prot_lig_C 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG3371Uncharacterized membrane proteinFunction unknown [S] 6.42
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 2.75
COG1308Transcription factor homologous to NACalpha-BTF3Transcription [K] 2.75
COG3643Glutamate formiminotransferaseAmino acid transport and metabolism [E] 2.75
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 0.92
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.92
COG1675Transcription initiation factor IIE, alpha subunitTranscription [K] 0.92
COG1727Ribosomal protein L18ETranslation, ribosomal structure and biogenesis [J] 0.92
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.92
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10059211All Organisms → cellular organisms → Archaea1257Open in IMG/M
3300002558|JGI25385J37094_10179345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus567Open in IMG/M
3300002560|JGI25383J37093_10001266All Organisms → cellular organisms → Archaea6916Open in IMG/M
3300002560|JGI25383J37093_10004286All Organisms → cellular organisms → Bacteria4414Open in IMG/M
3300002560|JGI25383J37093_10084985All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon952Open in IMG/M
3300002561|JGI25384J37096_10015476All Organisms → cellular organisms → Archaea2951Open in IMG/M
3300002562|JGI25382J37095_10042381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1772Open in IMG/M
3300002908|JGI25382J43887_10267167All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon775Open in IMG/M
3300002912|JGI25386J43895_10058274All Organisms → cellular organisms → Archaea1087Open in IMG/M
3300005167|Ga0066672_10986581All Organisms → cellular organisms → Archaea515Open in IMG/M
3300005171|Ga0066677_10259872All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon987Open in IMG/M
3300005178|Ga0066688_10884776All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermofilales → Thermofilaceae → Thermofilum → Thermofilum adornatum552Open in IMG/M
3300005178|Ga0066688_10996835All Organisms → cellular organisms → Archaea511Open in IMG/M
3300005180|Ga0066685_10941114All Organisms → cellular organisms → Archaea575Open in IMG/M
3300005446|Ga0066686_10897222All Organisms → cellular organisms → Archaea582Open in IMG/M
3300005446|Ga0066686_10899369All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300005450|Ga0066682_10462556All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon805Open in IMG/M
3300005450|Ga0066682_10924161All Organisms → cellular organisms → Archaea518Open in IMG/M
3300005451|Ga0066681_10170021All Organisms → cellular organisms → Bacteria → Proteobacteria1291Open in IMG/M
3300005518|Ga0070699_101364682All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermofilales → Thermofilaceae → Thermofilum → Thermofilum adornatum650Open in IMG/M
3300005536|Ga0070697_100010253All Organisms → cellular organisms → Archaea7301Open in IMG/M
3300005552|Ga0066701_10040072All Organisms → cellular organisms → Archaea2507Open in IMG/M
3300005558|Ga0066698_10000034All Organisms → cellular organisms → Archaea35649Open in IMG/M
3300005559|Ga0066700_11144416All Organisms → cellular organisms → Archaea508Open in IMG/M
3300005561|Ga0066699_10618950All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon777Open in IMG/M
3300006032|Ga0066696_10255191All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300006034|Ga0066656_10000092All Organisms → cellular organisms → Archaea26184Open in IMG/M
3300006046|Ga0066652_101449212All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon640Open in IMG/M
3300006791|Ga0066653_10047384All Organisms → cellular organisms → Archaea1775Open in IMG/M
3300006791|Ga0066653_10071805All Organisms → cellular organisms → Archaea1501Open in IMG/M
3300006794|Ga0066658_10000238All Organisms → cellular organisms → Archaea20257Open in IMG/M
3300006796|Ga0066665_10074876All Organisms → cellular organisms → Bacteria2414Open in IMG/M
3300006796|Ga0066665_10323141All Organisms → cellular organisms → Archaea1249Open in IMG/M
3300006796|Ga0066665_11054182All Organisms → cellular organisms → Archaea621Open in IMG/M
3300006796|Ga0066665_11438311All Organisms → cellular organisms → Archaea535Open in IMG/M
3300007258|Ga0099793_10109840All Organisms → cellular organisms → Archaea1282Open in IMG/M
3300007265|Ga0099794_10282491All Organisms → cellular organisms → Archaea858Open in IMG/M
3300009012|Ga0066710_104182346All Organisms → cellular organisms → Archaea539Open in IMG/M
3300009090|Ga0099827_10831905All Organisms → cellular organisms → Archaea799Open in IMG/M
3300009137|Ga0066709_100018603All Organisms → cellular organisms → Archaea6862Open in IMG/M
3300009137|Ga0066709_100286898All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2227Open in IMG/M
3300010127|Ga0127489_1160602All Organisms → cellular organisms → Archaea634Open in IMG/M
3300010301|Ga0134070_10066662All Organisms → cellular organisms → Archaea1226Open in IMG/M
3300010301|Ga0134070_10082725All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1106Open in IMG/M
3300010304|Ga0134088_10034655All Organisms → cellular organisms → Archaea2287Open in IMG/M
3300010304|Ga0134088_10057065All Organisms → cellular organisms → Archaea1800Open in IMG/M
3300010329|Ga0134111_10050114All Organisms → cellular organisms → Archaea1514Open in IMG/M
3300010333|Ga0134080_10398277All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon636Open in IMG/M
3300010336|Ga0134071_10214325All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon952Open in IMG/M
3300010336|Ga0134071_10286150All Organisms → cellular organisms → Archaea826Open in IMG/M
3300010361|Ga0126378_12732060All Organisms → cellular organisms → Archaea564Open in IMG/M
3300012189|Ga0137388_11143443All Organisms → cellular organisms → Archaea715Open in IMG/M
3300012199|Ga0137383_10013208All Organisms → cellular organisms → Archaea5591Open in IMG/M
3300012199|Ga0137383_10036538All Organisms → cellular organisms → Archaea3478Open in IMG/M
3300012201|Ga0137365_10085018All Organisms → cellular organisms → Archaea2383Open in IMG/M
3300012206|Ga0137380_10877561All Organisms → cellular organisms → Archaea771Open in IMG/M
3300012207|Ga0137381_10958690All Organisms → cellular organisms → Archaea738Open in IMG/M
3300012209|Ga0137379_10087036All Organisms → cellular organisms → Archaea3005Open in IMG/M
3300012209|Ga0137379_11542569All Organisms → cellular organisms → Archaea564Open in IMG/M
3300012211|Ga0137377_10030497All Organisms → cellular organisms → Archaea4883Open in IMG/M
3300012211|Ga0137377_10171321All Organisms → cellular organisms → Archaea2083Open in IMG/M
3300012211|Ga0137377_10940767All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon795Open in IMG/M
3300012349|Ga0137387_10120283All Organisms → cellular organisms → Archaea1850Open in IMG/M
3300012351|Ga0137386_10429809All Organisms → cellular organisms → Archaea951Open in IMG/M
3300012354|Ga0137366_10706095All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon719Open in IMG/M
3300012356|Ga0137371_10064719All Organisms → cellular organisms → Archaea2831Open in IMG/M
3300012359|Ga0137385_10005127All Organisms → cellular organisms → Bacteria11484Open in IMG/M
3300012359|Ga0137385_10702182All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon845Open in IMG/M
3300012362|Ga0137361_10546311All Organisms → cellular organisms → Archaea1063Open in IMG/M
3300012918|Ga0137396_10045073All Organisms → cellular organisms → Bacteria2999Open in IMG/M
3300012918|Ga0137396_10547046All Organisms → cellular organisms → Archaea857Open in IMG/M
3300012927|Ga0137416_10492133All Organisms → cellular organisms → Archaea1055Open in IMG/M
3300012971|Ga0126369_12303725All Organisms → cellular organisms → Archaea625Open in IMG/M
3300012972|Ga0134077_10488067All Organisms → cellular organisms → Archaea544Open in IMG/M
3300012976|Ga0134076_10474199All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon568Open in IMG/M
3300012977|Ga0134087_10129739All Organisms → cellular organisms → Archaea1081Open in IMG/M
3300014157|Ga0134078_10175230All Organisms → cellular organisms → Archaea859Open in IMG/M
3300015358|Ga0134089_10125221All Organisms → cellular organisms → Archaea1001Open in IMG/M
3300015359|Ga0134085_10622704All Organisms → cellular organisms → Archaea503Open in IMG/M
3300017654|Ga0134069_1072835All Organisms → cellular organisms → Archaea1100Open in IMG/M
3300017654|Ga0134069_1097682All Organisms → cellular organisms → Archaea956Open in IMG/M
3300017656|Ga0134112_10042328All Organisms → cellular organisms → Archaea1632Open in IMG/M
3300017656|Ga0134112_10354238All Organisms → cellular organisms → Archaea599Open in IMG/M
3300018431|Ga0066655_10154801All Organisms → cellular organisms → Archaea1366Open in IMG/M
3300018431|Ga0066655_11112328All Organisms → cellular organisms → Archaea553Open in IMG/M
3300018433|Ga0066667_10001692All Organisms → cellular organisms → Archaea8409Open in IMG/M
3300018433|Ga0066667_11642772All Organisms → cellular organisms → Archaea574Open in IMG/M
3300018433|Ga0066667_11937870All Organisms → cellular organisms → Archaea539Open in IMG/M
3300018433|Ga0066667_12222308All Organisms → cellular organisms → Archaea511Open in IMG/M
3300018482|Ga0066669_10002599All Organisms → cellular organisms → Archaea7495Open in IMG/M
3300026277|Ga0209350_1036404All Organisms → cellular organisms → Archaea1454Open in IMG/M
3300026296|Ga0209235_1000103All Organisms → cellular organisms → Archaea36060Open in IMG/M
3300026296|Ga0209235_1000247All Organisms → cellular organisms → Archaea26485Open in IMG/M
3300026298|Ga0209236_1007315All Organisms → cellular organisms → Bacteria6641Open in IMG/M
3300026317|Ga0209154_1304053All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon525Open in IMG/M
3300026323|Ga0209472_1222737All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon615Open in IMG/M
3300026325|Ga0209152_10000250All Organisms → cellular organisms → Archaea27297Open in IMG/M
3300026327|Ga0209266_1024953All Organisms → cellular organisms → Archaea3249Open in IMG/M
3300026327|Ga0209266_1100195All Organisms → cellular organisms → Archaea1268Open in IMG/M
3300026329|Ga0209375_1005508All Organisms → cellular organisms → Bacteria8418Open in IMG/M
3300026329|Ga0209375_1062876All Organisms → cellular organisms → Archaea1792Open in IMG/M
3300026332|Ga0209803_1004114All Organisms → cellular organisms → Archaea8600Open in IMG/M
3300026333|Ga0209158_1175618All Organisms → cellular organisms → Archaea772Open in IMG/M
3300026536|Ga0209058_1001463All Organisms → cellular organisms → Archaea20131Open in IMG/M
3300026537|Ga0209157_1003854All Organisms → cellular organisms → Archaea11371Open in IMG/M
3300028536|Ga0137415_10252234All Organisms → cellular organisms → Archaea1573Open in IMG/M
3300031720|Ga0307469_11023108All Organisms → cellular organisms → Archaea772Open in IMG/M
3300031820|Ga0307473_11281202All Organisms → cellular organisms → Archaea548Open in IMG/M
3300032205|Ga0307472_102110998All Organisms → cellular organisms → Archaea567Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil31.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil22.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil21.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil17.43%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1005921123300002558Grasslands SoilMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGGIGGIIRIVAGVVIPAYLTRQNVKIFFGKSSPSPGPQT*
JGI25385J37094_1017934513300002558Grasslands SoilLSLFGGASVLAGMASGPLALAIIVIIFGILGLALGAGFFTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGLIGGIIRTIAGIVIPVYLTRQKLRNFFGKGSTSPSK*
JGI25383J37093_1000126623300002560Grasslands SoilMMQSSEPKSKRPIGVSTIAIVALAGGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
JGI25383J37093_1000428613300002560Grasslands SoilVIGAIAFAGGLLSLFGAASVFSGNATGPTWLAIVVVVFGLLGLSLGVGFYTGARWAWMGGIVSYIISILLGILEIVYGGTIGGVGGVIRIVAGIVIP
JGI25383J37093_1008498513300002560Grasslands SoilILGLAVGAGFFTGAKRAWMAGVVTYIISIGLGIXEIVYGGQVGFIGGIIRTLAGIILPVYLMRPGPKSFFGKVSSAAKR*
JGI25384J37096_1001547613300002561Grasslands SoilVIGAIAFAGGLLSLFGAASVFSGNATGPTWLAIVVVVFGLLGLSLGVGFYTGARWAWMGGIVIYIISILLGILEIVYGGTIGGVGGVIRIVAGIVIPL
JGI25382J37095_1004238123300002562Grasslands SoilMASGPLALAIIVIIFGILGLALGAGFFTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGLIGGIIRTIAGIVIPVYLTRQKLRNFFGKGSTSPSK*
JGI25382J43887_1026716713300002908Grasslands SoilLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
JGI25386J43895_1005827423300002912Grasslands SoilGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
Ga0066672_1098658123300005167SoilASGPFSLAIIVIIFGILGLALGAGFYTGARWAWMAGIIIYVISIGLGISEIVYGGNVGFIGGIIRTIAGIVIPVYFTRPGPKSFFGKGASSPTK*
Ga0066677_1025987223300005171SoilLGLALGAGFYTGARWAWMAGIIIYVISIGLGISEIVYGGNVGFIGGIIRTIAGIVIPVYFTRPGPKSFFGKGASSPTK*
Ga0066688_1088477613300005178SoilFANRLIISPRNRDMMQSSEPKSKRPIGVSTIAIVALAGGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
Ga0066688_1099683523300005178SoilAYIVIIFGVLGLALGAGFYTGARWAWMAGIIIYILSIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPGPKSSFGKGASSPSK*
Ga0066685_1094111423300005180SoilIAAAGGLLSLFGAASVFSGNATGPTWLAIVVVVFGILGLSLGVGFYTGAHWAWMEGIVIYIISIVLGILEILYGGSVGGIGGIIRIIAGIVIPLYLTRADPRSFFGRTGTPSKP*
Ga0066686_1089722223300005446SoilASVLAGTATGPFAIAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRTIAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0066686_1089936913300005446SoilLFGAASAFSGNATGPTWLAIVVTIFGILGLTLGVGFYTGARWAWMGGIVIYIISILLGILEILYGGTVGGVGGVIRIVAGIIIPLYL
Ga0066682_1046255623300005450SoilVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0066682_1092416123300005450SoilTGPFAIAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIVSIGLGIAEILYGGTVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRS*
Ga0066681_1017002113300005451SoilLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0070699_10136468213300005518Corn, Switchgrass And Miscanthus RhizosphereVGVTAISIVAAAGGLLSLFGAAPRLAGMGAGPVELAYIVIIFGVLGLLLGAGFFTGAKWAWMADVIIYILSIGLGIAEILYGGQVGLIGGIVRTIAGIVIPIYLTRPKSKAFFSKGTTGPGK*
Ga0070697_10001025373300005536Corn, Switchgrass And Miscanthus RhizosphereLSLFGGASVLAGMASGPVALAYIVILFGILGLGLGAGFFTGAKWAWMAGVIIYIMSIGLGIAEIVYGGNVGLIGGIIRTVAGIVIPVYLTRPKTKSFFGKGAGSPTT*
Ga0066701_1004007243300005552SoilLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
Ga0066698_1000003443300005558SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGGIGGIIRIVAGVVIPAYLTRQNVKIFFGKSSPSPGPQT*
Ga0066700_1114441613300005559SoilGGLLSLFGAASIFSGNATGPTWLAIVVVFFGILGLSLGVGFYTGTRWAWMGGIVIYIVSILLGILEILYGGTVGGIGGVIRMVAGIVIPLYLTRAGPKSFFGKGRAAHSS*
Ga0066699_1061895013300005561SoilLGLALGAGFYTGAKWSWMAGIIIYIISIGLGIAEIIYGGNVGFIGGIIRTIAGIVIPVYLTRPCPKSFFGKGASSPGK*
Ga0066696_1025519133300006032SoilVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPRNFLGKSTTPPST*
Ga0066656_10000092103300006034SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGRIGGIIRIVAGVVIPAYLTRQKRQDLLRQEFTFTRPSNLTL*
Ga0066652_10144921223300006046SoilLAIIVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRRKPRSFFGKSTTLPST*
Ga0066653_1004738433300006791SoilAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGITEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPKSFFGKGVSSPGP*
Ga0066653_1007180543300006791SoilAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0066658_10000238203300006794SoilLFGAASIFSGNATGPTWLAIVVVFFGILGLSLGVGFYTGTRWAWMGGIVIYIVSILLGILEILYGGTVGGIGGVIRMVAGIVIPLYLTRAGPKSFFGKGRAAHSS*
Ga0066665_1007487643300006796SoilLLSLFGAASVFSGNGTGPTWLAIAVLIFGILGLLLGVGFYTGARWAWMGGIVIYVVSILLGILEIVYGGTVGGIGGVIRIAAGIVIPLYLTRAGPRSFFGKGLVSPAHSS*
Ga0066665_1032314133300006796SoilASVLAGTATGPFAIAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPKSFFGKSRSSPSM*
Ga0066665_1105418223300006796SoilLLSLYGGASVLAGNATGPFALAIMVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRRKPRSFFGKSTTLPST*
Ga0066665_1143831123300006796SoilVGGLLSLFGGASVLAGTATGPFAIAIIVVIFGILGLALGAGFYTGARWAWMAGIVIYIISIGLGIAEILYGGSVGFVGGIIRTIAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0099793_1010984013300007258Vadose Zone SoilGAASVFSGNATGPTWLAIVVTIFGILGLALGIGFYSGAGWARMAGIAIYLVSILLGILEIVYGGTVGGVGGVIRIVAGIVIPLYLTRGGPKKFFRKEPVSTSS*
Ga0099794_1028249113300007265Vadose Zone SoilLSLFGAASVFAGSATGPTWLAIVVTIFGILGLALGVGFYTGARWAWMGGIVIYIVSILLGILEIVYGGTIGGVGGVIRIVAGIIIPSYLTLAGPKKFFGKTPASPSP*
Ga0066710_10418234613300009012Grasslands SoilAASVFSGNGTGPTWLAIVVVIFGILGLTLGIGFYTGTRRAWMGGIVIYIVSILLGILEIVYGGTVGGVGGVIRIAAGVVIPLYLTRAGPKTFFGKTPASHTS
Ga0099827_1083190513300009090Vadose Zone SoilLSLFGAASVFAGSATGPTWLAIVVTIFGILGLALGVGFYTGARWAWMGGILVYIVSILLGILEIVYGGTIGGVGGVIRILAGIVIPLYLTRAGTKKFFGKTPASPSP*
Ga0066709_10001860383300009137Grasslands SoilMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGRIGGIIRIVAGVVIPAYLTRQKRQDLLRQEFTFTRPSNLTL*
Ga0066709_10028689823300009137Grasslands SoilMGAGPVELAYIVIIFGVLGLALGAGFYTGARWAWMAGIIIYILSIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPGPKSSFGKGASSPSK*
Ga0127489_116060223300010127Grasslands SoilIFGILGLALGAGFYTGARWAWMTGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPRNFLGKSTTPPST*
Ga0134070_1006666213300010301Grasslands SoilGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQGPRSFFGKSTTLPST*
Ga0134070_1008272523300010301Grasslands SoilGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRS*
Ga0134088_1003465513300010304Grasslands SoilVVAAAGGLLSLFGAASAFSGNATGPTWLAIVVVVFGILGLSLGVGFYTGAHWAWIGGIVIYVISILLGILEILYGGTIGGIGGVIRIIAGIVIPLYLTRAGPKSFFGRTGAPSKP*
Ga0134088_1005706543300010304Grasslands SoilVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRRKPRSFFGKSTTLPST*
Ga0134111_1005011433300010329Grasslands SoilGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRSSPSM*
Ga0134080_1039827723300010333Grasslands SoilGILGLALGARFYTGARWAWMAGIIIYIVSIGLGIAEIVYGGNVGFIGGIIRTIAGIVIPVYLTRPGPKRFFGKGASSPTK*
Ga0134071_1021432513300010336Grasslands SoilIIAFVAAAGGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRRKPRSFFGKSTTLPST*
Ga0134071_1028615023300010336Grasslands SoilALAIIVIMFGILGLALGAGFYTGAKWAWMTGIMIYIISIGLGIAEILYGGDVGLIGGIIRTIAGIVIPVYLTRPKPKSFFGKSASWPNK*
Ga0126378_1273206013300010361Tropical Forest SoilLIAIIAAAGGVLSLFGGAMVLSGMASGPLILAYAVIVFGILGLVLGTGFFIGAKWAWPSGFTIYIASVGLGVAEIVYGGNVGFLGGIIRVIAGILIPAYLTMKGPKAFFGKS*
Ga0137388_1114344313300012189Vadose Zone SoilAIVAAAGGLLSLFGGASRLAGMGTGPIELAYIVIIFGVLGLALGAGFYTGAKWAWMAGIIIYVISIGLGIAEILYGGNVGFIGGIIRIIAGVVIPIYLTRPKPKSFFGKGASSPSK*
Ga0137383_1001320833300012199Vadose Zone SoilMGTGPVELAYIVIIFGVLGLALGAGFHTGARWAWMAGIIIYIISIGLGVAEILYGGSVGLIGGIIRTIAGVVIPIYLTRPKPISFFGKGASSASK*
Ga0137383_1003653823300012199Vadose Zone SoilMTFGILGLILGAGFYTGAGWAWMAGLVIYFVSIGLGIAEIVYGGRVGFIGGIIRLLAGIVIPIYLTRSGPKDFFVKTKDLT*
Ga0137365_1008501823300012201Vadose Zone SoilMTFRILGLILGAGFYTGAGWAWMAGLVIYFVSIGLGIAEIVYGGRVGFIGGIIRLLAGIVIPIYLTRSGPKDFFVKTKDLT*
Ga0137380_1087756113300012206Vadose Zone SoilMASGPFVLAIIVIIFGILGLTLGAGFFTGARWPWMAGIIIYVISIGLGISEIVYGGNVGFIGGIIRTIAGIVIPVYLTRPSPKSFFGKGASSPSK*
Ga0137381_1095869013300012207Vadose Zone SoilGAASVFAGSATGPTWLAIVVTIFGIFGLALGVGFYTGARWAWMGGILIYIVSIVLGILEIVYGGTIGGVGGVIRILAGIVIPLYLTRVGTKKFFGKTPASPSP*
Ga0137379_1008703633300012209Vadose Zone SoilLAFALGGGFFTGVKWAWMAGIIIYIVSIGLGIAEIIYGGNVGQIGGIIRTLAGIILPVYLLRPGPKSFFGKGSGSTGT*
Ga0137379_1154256913300012209Vadose Zone SoilILGLILGAGFYTGAGWAWMAGLVIYFVSIGLGIAEIVYGGRVGFIGGIIRLLAGIVIPIYLTRSGPKDFFVKTKDLT*
Ga0137377_1003049733300012211Vadose Zone SoilMVTSQSTPKRQIGITIIAIIAAAGGLLSLFGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIGIYIVSIGLGIAEIFYGGSVGFVGGIIRIFAGIIIPVYLTRQRPKSFFGKGVSSPGG*
Ga0137377_1017132153300012211Vadose Zone SoilSVFAGSATGPTWLAIVVTIFGIFGLALGVGFYTGARWAWMGGILIYIVSIVLGILEIVYGGTIGGVGGVIRILAGIVIPLYLTRVGTKKFFGKTPASPSP*
Ga0137377_1094076713300012211Vadose Zone SoilMIIAIVAAAGGILSLFGGASVLAGTASGPFALAIVVIVFGILGLALGAGFFTGAKWAWMAGIIIYIISIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRP
Ga0137387_1012028313300012349Vadose Zone SoilMMQSSEPKSKRPIGVTIISIVAAAGGLLSLYGGASVLAGNATGPFALAIIVVVFGTLGLALGAGFYTGARWAWMTGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPRNFFGKSTTLPST*
Ga0137386_1042980913300012351Vadose Zone SoilMASGPFALAIIVIMFGILGLALGAGFYTGAKWAWMTGIMIYIISIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPKPKSFFGKSASSPNK*
Ga0137366_1070609513300012354Vadose Zone SoilGGASVLAGNATGPFALAIIVVVFGILGLVLGAGFYTGARWAWMAGIMIYIISIGLGIAEILYGGNVGLVGGIIRILAGIIIPVYLTREKPKSFFGKGVSSPGP*
Ga0137371_1006471933300012356Vadose Zone SoilMVSSQSKSKRAVGVAIIAVIAAAGGLLSLFGGASVLAGNATGPFALAIIVVTFGILGLALGAGFYIRAGWAWMAGIVIYIISIGLGVAEIIYGGSVGFIGGIIRILAGIIIPAYLTRQGPKHFFGKGASSPSP*
Ga0137385_1000512723300012359Vadose Zone SoilMASGPFALAIIVIMFGILGLALGAGFYTGAKWAWMTGIMIYIISIGLGIAEILYGGDVGLIGGIIRTIAGIVIPVYLTRPKPKSFFGKSASWPNK*
Ga0137385_1070218213300012359Vadose Zone SoilLALGAGFYTGARWAWMAGIIIYIISIGLGIAEVIYGGNVGLIGGVIRTIAGIVIPAYLIRPKPKSFFGKGASSPTK*
Ga0137361_1054631123300012362Vadose Zone SoilIMFGILGLALGAGFYTGAKWAWMTGIIIYIISIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPKPKSFFGKSASSPNK*
Ga0137396_1004507313300012918Vadose Zone SoilILGLALGAGFFTGARWAWMAGITIYIISIGLGIAEIIYGGQVGLIGGIIRTIAGIIIPIYLTRPKPKAFFGKGTIGP*
Ga0137396_1054704623300012918Vadose Zone SoilGPVVLAYIVIIFGILGLTLSVGFFTGAKWAWIAGIVIYIISIGLGIAEIVYGGQVGFIGGIIRTLAGIVIPVYLTRLGPKSFLGKVSSAAKT*
Ga0137416_1049213313300012927Vadose Zone SoilFGILGLALGAGFFTGAKWAWMAGIIIYIISIGLGIAEIIYGGQVGLMGGIIRTIAGIVIPVYLNRPKPKSFFGKGSSSPST*
Ga0126369_1230372513300012971Tropical Forest SoilLIAIIAAAGGVLSLFGGAMVLSGMASGPLILAYAIIVFGILGLVLGTGFFIGAKWAWPSGFTIYIASVGLGVAEIVYGGNVGFLGGIIRVIAGILIPAYLTMKGPKAFFGKS*
Ga0134077_1048806723300012972Grasslands SoilTGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGRIGGIIRIVAGVVIPAYLTRQKRQDLLRQEFTFTRPSNLTL*
Ga0134076_1047419913300012976Grasslands SoilVAIVVITFGILGLALGAGFFTGAKWAWMAGIVIYIISIGLGIAEIIYGGQVGFIGGIIRTLAGIILPVYLMRPGRRASSAKFQALPRNR*
Ga0134087_1012973913300012977Grasslands SoilFGGASVLAGNTTGPFALAIIVVIFGILGLALGAGFYTGARWAWIAGIGIYIVSIGLGIAETLYGGSVGFVGGIIRILAGIIIPVYLTRQKPRNFLGKSTTPPST*
Ga0134078_1017523013300014157Grasslands SoilVLAGNATGPFALAIIVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRVLAGIIIPVYLTRRKPRSFFGKSTTLPST*
Ga0134089_1012522113300015358Grasslands SoilILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR*
Ga0134085_1062270413300015359Grasslands SoilVLAGMASGPFALAIIVIIFGILGLALGAGFYTGARWAWMAGIIIYIVSIGLGIAEIVYGGNVGFIGGIIRTIAGIVIPVHLTRPGPKSFFGKGASSPSK*
Ga0134069_107283513300017654Grasslands SoilGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQKPKSFFGKSRSSPSM
Ga0134069_109768213300017654Grasslands SoilGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQGPRSFFGKSTTLPST
Ga0134112_1004232833300017656Grasslands SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGGIGGIIRIVAGVVIPAYLTRQNVKIFFGKSSPSPGPQA
Ga0134112_1035423823300017656Grasslands SoilMMQSSEPKSKRPIGVSTIAIVALAGGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIATVFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPKSFFGKGVSSPGR
Ga0066655_1015480113300018431Grasslands SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGRIGGIIRIVAGVVIPAYLTRQKRQDL
Ga0066655_1111232823300018431Grasslands SoilASVLAGTATGPFAIAIIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRSSPSM
Ga0066667_1000169273300018433Grasslands SoilMMQSSEPKSKRPIGVSTIAIVALAGGLLSLYGGASVLAGNATGPFTLAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR
Ga0066667_1164277213300018433Grasslands SoilLFGAASVFSGNATGPTWLAIVVTIFGILGLTLGVGFYTGARWAWMGGIVIYIVSILLGILEILNGGTVGGVGGVIRIVAGITISPSLAGP
Ga0066667_1193787013300018433Grasslands SoilIAIVATAGGLLSIFGGASRLAGMGAGPVELAYIVIIFGVLGLALGAGFYTGARWAWMAGIIIYILSIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPGPKSSFGKGASSPSK
Ga0066667_1222230813300018433Grasslands SoilLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGGIGGIIRIVAGVVIPAYLTRQNVKIFFGKSSPSPGPQT
Ga0066669_1000259983300018482Grasslands SoilVLAGMASGPFALAIIVIIFGILGLALGAGFYTGARWAWMAGIIIYIVSIGLGIAEIVYGGNVGFIGGIIRTIAGIVIPVYL
Ga0209350_103640423300026277Grasslands SoilMMQSSEPKSKRPIGVSTIAIVALAGGLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR
Ga0209235_1000103133300026296Grasslands SoilLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIGAGFYTGARWAWMAGIIIYIISIGLGIAEIFYGGNVGFVGGIIRILAGIIIPAYLTRRKPKSFFGKGVSSPGR
Ga0209235_1000247323300026296Grasslands SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGGIGGIIRIVAGVVIPAYLTRQNVKIFFGKSSPSPGPQT
Ga0209236_100731513300026298Grasslands SoilGASVLSGMASGPFAVAIIVIMFGILGLALGAGFYTGAKWAWMTGIIIYIISIGLGIAEILYGGNVGLIGGIIRTIAGIVIPVYLTRPKPKSFFGKSASWPNK
Ga0209154_130405313300026317SoilGLALGAGFYTGAKWAWVAGIIIYVISIGLGISEIVYGGNVGFIGGIIRTIAGIVIPIYLTRPGPKSFFGKGASSPTK
Ga0209472_122273713300026323SoilLGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRIIAGIIIPAYLTRQKPKSFFGKSRSSPSM
Ga0209152_1000025073300026325SoilLFGAASIFSGNATGPTWLAIVVVFFGILGLSLGVGFYTGTRWAWMGGIVIYIVSILLGILEILYGGTVGGIGGVIRMVAGIVIPLYLTRAGPKSFFGKGRAAHSS
Ga0209266_102495313300026327SoilIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQKPKSFFGKSRSSPSM
Ga0209266_110019513300026327SoilIVVIFGILGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQGPRSFFGKSTTLPST
Ga0209375_100550873300026329SoilLGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPAYLTRQGPRSFFGKSTTLPST
Ga0209375_106287643300026329SoilLGLALGAGFYTGARWAWMAGIIIYIISIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRQKPKSFFGKGVSSPGP
Ga0209803_1004114113300026332SoilLFGAASVFSGNGTGPTWLAIAVLIFGILGLLLGVGFYTGARWAWMGGIVIYVVSILLGILEIVYGGTVGGIGGVIRIAAGIIIPLYLTRAGPRSFFGKGLVSPAHSS
Ga0209158_117561823300026333SoilLSLFGAASVFSGNGTGPTWLAIAVLIFGILGLLLGVGFYTGARWAWMGGIVIYVVSILLGILEIVYGGTVGGIGGVIRIAAGIIIPLYLTRAGPRSFFGKGLVSPAHSS
Ga0209058_1001463173300026536SoilLSGMATGPFVLAVVVIIFGIFGLALGAGLYTGMGWAWMAGIIIYIVSIGLGVAEIVYGGMVGRIGGIIRIVAGVVIPAYLTRQKRQDLLRQEFTFTRPSNLTL
Ga0209157_100385463300026537SoilLLSLYGGASVLAGNATGPFALAIIVVVFGILGLAIATGFYTGARWAWMAGIVIYIVSIGLGIAEILYGGSVGFVGGIIRILAGIIIPVYLTRRKPRSFFGKSTTLPST
Ga0137415_1025223423300028536Vadose Zone SoilYIVIIFGILGLTLSVGFFTGAKWAWIAGIVIYIISIGLGIAEIVYGGQVGFIGGIIRTLAGIVIPVYLTRLGPKSFLGKVSSAAKT
Ga0307469_1102310813300031720Hardwood Forest SoilVLAGMASGPVALAYIVIVFGILGLALGAGFFTGAKWAWMAGTIIYIVSIGLGIAEIVYGGNVGLIGGIIRTVAGIVIPVYLTRPKTKSFFGKGIVSTAT
Ga0307473_1128120213300031820Hardwood Forest SoilLSLFGGASVLAGMASGPVALAYIVIVFGILGLALGAGFFTGAKWAWMAGMIVYIMSIGLGIAEIVYGGNVGLIGGIIRTVAGIVIPVYLTRPKTKSFFGKGTGSPAT
Ga0307472_10211099823300032205Hardwood Forest SoilGNASGPIWLAVVVTIFGILGLALGVGFYTGARWAWMGGIVIYIVSILLGILEIVYGGTVGGIGGVIRITAGIVIPLYLTRTGPKIFFGRGLVPPSA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.