NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F088700

Metagenome / Metatranscriptome Family F088700

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088700
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 44 residues
Representative Sequence RVAFIRGDQPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL
Number of Associated Samples 89
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.08 %
% of genes from short scaffolds (< 2000 bps) 81.65 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.275 % of family members)
Environment Ontology (ENVO) Unclassified
(28.440 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.459 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.29%    β-sheet: 8.57%    Coil/Unstructured: 67.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF00515TPR_1 30.28
PF13181TPR_8 18.35
PF13414TPR_11 10.09
PF13328HD_4 9.17
PF13087AAA_12 0.92
PF01433Peptidase_M1 0.92
PF03551PadR 0.92
PF08281Sigma70_r4_2 0.92
PF07719TPR_2 0.92
PF00144Beta-lactamase 0.92
PF09413DUF2007 0.92
PF12704MacB_PCD 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0308Aminopeptidase N, contains DUF3458 domainAmino acid transport and metabolism [E] 0.92
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.92
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.92
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.92
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.92
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.92
COG2367Beta-lactamase class ADefense mechanisms [V] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12078538All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300002562|JGI25382J37095_10076798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1234Open in IMG/M
3300002917|JGI25616J43925_10362972All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis535Open in IMG/M
3300004101|Ga0058896_1432966All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300004612|Ga0068961_1291688All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter608Open in IMG/M
3300005174|Ga0066680_10439743All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter825Open in IMG/M
3300005177|Ga0066690_10422182All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae904Open in IMG/M
3300005440|Ga0070705_100209545All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1342Open in IMG/M
3300005454|Ga0066687_10895309All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae529Open in IMG/M
3300005561|Ga0066699_10645722All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae759Open in IMG/M
3300005569|Ga0066705_10964855All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae505Open in IMG/M
3300005576|Ga0066708_10010479All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4345Open in IMG/M
3300005843|Ga0068860_100040357All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4461Open in IMG/M
3300006052|Ga0075029_101097349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300006059|Ga0075017_100075187All Organisms → cellular organisms → Bacteria2314Open in IMG/M
3300006086|Ga0075019_10033005All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2908Open in IMG/M
3300006162|Ga0075030_100100625All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2357Open in IMG/M
3300006755|Ga0079222_10188125All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1226Open in IMG/M
3300006755|Ga0079222_11450433All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae639Open in IMG/M
3300006800|Ga0066660_10149412All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1729Open in IMG/M
3300006903|Ga0075426_10017868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5068Open in IMG/M
3300007255|Ga0099791_10027005All Organisms → cellular organisms → Bacteria2499Open in IMG/M
3300007265|Ga0099794_10241067All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300009038|Ga0099829_10497385All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300009038|Ga0099829_10530530All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300009038|Ga0099829_10983397All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300009038|Ga0099829_11252396All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium614Open in IMG/M
3300009038|Ga0099829_11298421All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300009088|Ga0099830_11307525All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300009137|Ga0066709_104147753All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae527Open in IMG/M
3300010046|Ga0126384_10915468All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300010111|Ga0127491_1140173All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae586Open in IMG/M
3300010304|Ga0134088_10157801All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300010335|Ga0134063_10317872All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300010862|Ga0126348_1334025All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300011082|Ga0138526_1117767All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia533Open in IMG/M
3300011088|Ga0138576_1009331All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300011269|Ga0137392_11140232All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium637Open in IMG/M
3300011270|Ga0137391_11498032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300011271|Ga0137393_11098421All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae676Open in IMG/M
3300012189|Ga0137388_10157435All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2018Open in IMG/M
3300012189|Ga0137388_10418018All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300012202|Ga0137363_10594769All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300012202|Ga0137363_11665913All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300012203|Ga0137399_10187713All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1672Open in IMG/M
3300012207|Ga0137381_10654107All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300012208|Ga0137376_10492625All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300012208|Ga0137376_11349324All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300012362|Ga0137361_11928535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300012363|Ga0137390_10721409All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300012363|Ga0137390_11541565All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012379|Ga0134058_1056292All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae707Open in IMG/M
3300012389|Ga0134040_1270706All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300012405|Ga0134041_1036188All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300012409|Ga0134045_1252733All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1023Open in IMG/M
3300012582|Ga0137358_10679746All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300012685|Ga0137397_10293978All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300012918|Ga0137396_10054876All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2744Open in IMG/M
3300017930|Ga0187825_10152641All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae817Open in IMG/M
3300017930|Ga0187825_10367685All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300019789|Ga0137408_1290348All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300020580|Ga0210403_10065036All Organisms → cellular organisms → Bacteria2926Open in IMG/M
3300020580|Ga0210403_10486758All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300020580|Ga0210403_10842161All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300020580|Ga0210403_10929570All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300020581|Ga0210399_10068253All Organisms → cellular organisms → Bacteria → Acidobacteria2876Open in IMG/M
3300020581|Ga0210399_10857504All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300020583|Ga0210401_10013835All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7829Open in IMG/M
3300021088|Ga0210404_10408344All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300021178|Ga0210408_10437884All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300021432|Ga0210384_10023239All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5914Open in IMG/M
3300022508|Ga0222728_1088116All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae573Open in IMG/M
3300022525|Ga0242656_1080734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae610Open in IMG/M
3300022726|Ga0242654_10295133All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300024330|Ga0137417_1125419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300024330|Ga0137417_1150619All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300025939|Ga0207665_10466519All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300026291|Ga0209890_10053678All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1481Open in IMG/M
3300026301|Ga0209238_1028980All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2065Open in IMG/M
3300026318|Ga0209471_1162800All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae906Open in IMG/M
3300026329|Ga0209375_1064537All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1760Open in IMG/M
3300026360|Ga0257173_1020238All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300026529|Ga0209806_1099937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1240Open in IMG/M
3300026532|Ga0209160_1327248All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis523Open in IMG/M
3300026538|Ga0209056_10053074All Organisms → cellular organisms → Bacteria3609Open in IMG/M
3300026551|Ga0209648_10360277All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300026551|Ga0209648_10476258All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300027537|Ga0209419_1052717All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300027587|Ga0209220_1009168All Organisms → cellular organisms → Bacteria2643Open in IMG/M
3300027605|Ga0209329_1042254All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300027633|Ga0208988_1091844All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300027643|Ga0209076_1067426All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300027655|Ga0209388_1058333All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300027846|Ga0209180_10034332All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2745Open in IMG/M
3300027846|Ga0209180_10065810All Organisms → cellular organisms → Bacteria → Acidobacteria2024Open in IMG/M
3300027898|Ga0209067_10051939All Organisms → cellular organisms → Bacteria → Acidobacteria2092Open in IMG/M
3300027903|Ga0209488_10680756All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300027908|Ga0209006_10021997All Organisms → cellular organisms → Bacteria → Acidobacteria5780Open in IMG/M
3300031057|Ga0170834_108314646All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300031231|Ga0170824_101815043All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300031718|Ga0307474_10779650All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300031820|Ga0307473_10551339All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300031820|Ga0307473_10699921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300031820|Ga0307473_11141185All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300031962|Ga0307479_10318827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1536Open in IMG/M
3300032076|Ga0306924_10665847All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300032174|Ga0307470_10266300All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300032180|Ga0307471_100612745All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300032180|Ga0307471_101535818All Organisms → cellular organisms → Bacteria823Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.50%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.59%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.75%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.83%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004101Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010111Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010862Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011082Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011088Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012389Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1207853813300000789SoilGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
JGI25382J37095_1007679813300002562Grasslands SoilTRVAFIRGDQPVEFGVVAKVIDVMRSSGVASVGLLTPDLEKGF*
JGI25616J43925_1036297223300002917Grasslands SoilTRVAFIRGDGPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGL*
Ga0058896_143296613300004101Forest SoilFEKLGPRIEELFKQRASRIAFIRGDRPVEFGVVANVIDVMHTSGISSVGLLTPDLEKGF*
Ga0068961_129168813300004612Peatlands SoilIEEIFKQRASRIAFIRGDQPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGF*
Ga0066680_1043974313300005174SoilARVAFIRGDAPVEFGVVASVIDVMHTSGIASVGLLTPDLERVL*
Ga0066690_1042218213300005177SoilIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHAAGIAPVGLLTPELEKAF*
Ga0070705_10020954513300005440Corn, Switchgrass And Miscanthus RhizosphereAFVRGENPVEFQVVAQVIDDMHAAGISSVGLLTPELEQNH*
Ga0066687_1089530923300005454SoilGSRIEEIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHAAGIAPVGLLTPELEKAF*
Ga0066699_1064572213300005561SoilRGDKPVEFGVVAEVIDVMHVSGIASVGLLTPELEKAF*
Ga0066705_1096485523300005569SoilFKLRATRVAFIRGDKPVEFGVVAEVIDVMHAAGIASVGLLTPELEKAF*
Ga0066708_1001047913300005576SoilIEEIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHAAGIASVGLLTPELEKAF*
Ga0068860_10004035753300005843Switchgrass RhizosphereFVRGENPVEFQVVAQVIDDMHAAGISSVGLLTPELEQNH*
Ga0075029_10109734923300006052WatershedsQPVEFGVVANVIDVMHTSGIASVGLLTTGLEKGF*
Ga0075017_10007518733300006059WatershedsFKQRASHVAFIRGDEPVQFGVVANVIDVMHTSGIASVGLLTPGLEKGF*
Ga0075019_1003300513300006086WatershedsLEEIFRLRASRAAFIKGDGVVEFAKVASVIDVMHSSGVDSVGLLTPELEKGL*
Ga0075030_10010062543300006162WatershedsSRAAFIKGDGVVEFAKVASVIDVMHSSGVDSVGLLTPELEKGL*
Ga0079222_1018812513300006755Agricultural SoilVAFIRGDQPVEFGVVANVIDVMHTSGVASVGLLTLELEKGF*
Ga0079222_1145043313300006755Agricultural SoilIFKQRASRVAFIRGDRPVEFGVVAKVIDVMHTSGIASVGLLTPDLENAF*
Ga0066660_1014941233300006800SoilEIFKSRATRVAFIRGEKPVEFGVVANVIDVMHTSGVASVGLLTPELEKGF*
Ga0075426_1001786813300006903Populus RhizosphereVAFIRGDQPVEFGVAAKVIDVMHTSGIASVGLLTPELEEAF*
Ga0099791_1002700533300007255Vadose Zone SoilKLRAVRVAFIRGDAPVEFGVVAKVIDALHTSGIASVGLLTPDLEKGL*
Ga0099794_1024106723300007265Vadose Zone SoilFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0099829_1049738523300009038Vadose Zone SoilIFKVRIDRTAFIRGDSSVEFSVVAKVIDVMHTAGVAPVGLLTPELEKDL*
Ga0099829_1053053023300009038Vadose Zone SoilFICGDGPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGL*
Ga0099829_1098339723300009038Vadose Zone SoilIFKQRATRVAFIRGDAPVEFGVVASVIDVMHTSGIASVGLLTPDLERVL*
Ga0099829_1125239613300009038Vadose Zone SoilRVAFIRGDQPVEFGVVAQVIDVMHTSGIGSVGLLTPDLEKGL*
Ga0099829_1129842123300009038Vadose Zone SoilRVAFIRGDGPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGL*
Ga0099830_1130752523300009088Vadose Zone SoilRASRVAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL*
Ga0066709_10414775313300009137Grasslands SoilDKLGPRIEEIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHASGIASVGLLSPELEKAF*
Ga0126384_1091546813300010046Tropical Forest SoilASRAAFVRGDSPVEFAVVVRVIDTMRAAGVTSIGLLTPELEKDR*
Ga0127491_114017313300010111Grasslands SoilDKLGSRIEEIFKSRATRVAFIRGEKPVEFGVVANVIDVMHTSGVASVGLLTPELEKGF*
Ga0134088_1015780113300010304Grasslands SoilTAFIQGDSSVEFSVVAKVIDVMHTAGVAPVGLLTPELEKGL*
Ga0134063_1031787223300010335Grasslands SoilKLRATRVAFVRGDGTVEFGVVAKVIDVMQTSGIASVGLLTPDLDKGL*
Ga0126348_133402513300010862Boreal Forest SoilGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDKGL*
Ga0138526_111776713300011082Peatlands SoilEIFKQRATRVAFIRGDQPVEFGVVANVIDVMHTSGIASVGLLTPDLEKSF*
Ga0138576_100933113300011088Peatlands SoilDQPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGF*
Ga0137392_1114023223300011269Vadose Zone SoilGPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL*
Ga0137391_1149803213300011270Vadose Zone SoilRVAFIRGDQPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL*
Ga0137393_1109842113300011271Vadose Zone SoilRIEEIFKQRATRVAFIRGDQPVEFGVVANVIDVMHTSGIASVGLLTPDLEKAF*
Ga0137388_1015743513300012189Vadose Zone SoilQPVEFGVVAKVIDVMRSSGIASVGLLTPGLEKGS*
Ga0137388_1041801813300012189Vadose Zone SoilRTAFIRGDSSVEFSVVAKVIDVMHTAGVAPVGLLTPELEKDL*
Ga0137363_1059476923300012202Vadose Zone SoilRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137363_1166591313300012202Vadose Zone SoilGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137399_1018771333300012203Vadose Zone SoilQRASRIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137381_1065410723300012207Vadose Zone SoilRVAFIRGDGPVEFGVVAKVIDVMHTSGVASVGLLTPDLEKGF*
Ga0137376_1049262513300012208Vadose Zone SoilVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGLGQF*
Ga0137376_1134932423300012208Vadose Zone SoilDGTVEFGVVAKVIDVMQTSGIASVGLLTPDLDKGL*
Ga0137361_1192853523300012362Vadose Zone SoilAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137390_1072140923300012363Vadose Zone SoilIFKVRIDRTAFIRGDSSVEFSVVAKVIDVMHTAGVAPVGLLTPEQEKDL*
Ga0137390_1154156523300012363Vadose Zone SoilGPVEFGVVAKVIDVMHTSGIASVGLLTPGLEKGL*
Ga0134058_105629213300012379Grasslands SoilLGSRIEEIFKSRATRVAFIRGEKPVEFGVVANVIDVMHTSGVASVGLLTPELEKGF*
Ga0134040_127070613300012389Grasslands SoilGRFQAARDAFIRGDGAVEFRVVAKVIDVMHTSGIASVGLLTRDLEKGLGRF*
Ga0134041_103618823300012405Grasslands SoilVEFGVVASVIDVMYTSGIASVGLLAPHLEKGLGQF*
Ga0134045_125273313300012409Grasslands SoilIFKSRATRVAFIRGEKPVEFGVVANVIDVMHTSGVASVGLLTPELEKGF*
Ga0137358_1067974613300012582Vadose Zone SoilIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137397_1029397823300012685Vadose Zone SoilSRIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL*
Ga0137396_1005487643300012918Vadose Zone SoilRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDKGL*
Ga0187825_1015264113300017930Freshwater SedimentQSRLGEIFKMRASRIAFIRGDRAVEFSTVARVIDVMHGVGISSVGLLTPDLEKGL
Ga0187825_1036768523300017930Freshwater SedimentRATRVAFIRGDSPVEFGVVARVIDVMHTVGIASVGLLTPDLEKGL
Ga0137408_129034813300019789Vadose Zone SoilAACLASRTAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDQGL
Ga0210403_1006503673300020580SoilKMRASRIAFIRGDAPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL
Ga0210403_1048675813300020580SoilKPRATRVAFIRGDGPVEFGVVAQVIDVMHASGIASIGLLTPGLEKGL
Ga0210403_1084216113300020580SoilIRGDAPVEFEVVARVIDVMHTSGIASVGLLTPDLEKGF
Ga0210403_1092957013300020580SoilKLRATRVAFVRGDGTVEFGVVAKVIDVMQSSGVASVGLLTPDLEKGL
Ga0210399_1006825313300020581SoilGDKPVEFGVVANVIDVMHTSGIASVGLLTPELDKGL
Ga0210399_1085750423300020581SoilNHMAFVRGDAGIEYQAVAKVIDVMQSAGISSVGLLTPQLERGH
Ga0210401_1001383583300020583SoilRTAFIRGDKPVEFGVVANVIDVMHTSGIASVGLLTPELDKGL
Ga0210404_1040834423300021088SoilTAFVSGDSAIEFQVVAKVIDVMDAAGISSVGLLTPQLEKGH
Ga0210408_1043788413300021178SoilAFIRGDAPVEFGVVAKVIDALHTSGIASVGLLTPDLEKGL
Ga0210384_1002323913300021432SoilIRGDKPVEFGVVANVIDVMHTSGIASVGLLTPDLDKGL
Ga0222728_108811613300022508SoilEIFKQRASRIAFIRGDRPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGF
Ga0242656_108073423300022525SoilFKQRASRIAFIRGDRPVEFGVVANVIDVMHTSGISSVGLLTPDLEKGF
Ga0242654_1029513323300022726SoilAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPGLEKGL
Ga0137417_112541913300024330Vadose Zone SoilGTVEFGVVAKVIDDVMQTSGIASVGLLTPDLEKGL
Ga0137417_115061933300024330Vadose Zone SoilRGDAPVEFGVVAKVIDALHTSGIASVGLLTPDLEKGL
Ga0207665_1046651923300025939Corn, Switchgrass And Miscanthus RhizosphereMRATRVAFIRGDGPVEFGVVANVIDVIHTSGIASVGLLTPDLEKGLGQF
Ga0209890_1005367833300026291SoilTAFVRGDGTVEFQAVAKVIDVMQSAGISSVGLLTPQLENGH
Ga0209238_102898013300026301Grasslands SoilFKLRATRVAFIRGDGAVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGLGQF
Ga0209471_116280013300026318SoilFDKLGSRIEEIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHASGIASVGLLTPELEKAF
Ga0209375_106453713300026329SoilFIRGDGPVEFGVVASVIDVMYTSGIASVGLLTPDLEKGLGQF
Ga0257173_102023813300026360SoilASRIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDRGL
Ga0209806_109993713300026529SoilIFKLRATRVAFIRGDKPVEFGVVAEVIDVMHAAGIAPVGLLTPELEKAF
Ga0209160_132724823300026532SoilVSFDKLGSRIEEIFKSRATRVAFIRGEKPVEFGVVANVIDVMHTSGVASVGLLTPELEKG
Ga0209056_1005307453300026538SoilRGDGPVEFGVVASVIDVMYTSGIASVGLLTPDLEKGLGQF
Ga0209648_1036027723300026551Grasslands SoilGDQPVEFGVVANVIDVMHASGIASVGLLTPDLEKAF
Ga0209648_1047625823300026551Grasslands SoilRLAFIRGDEPVEFGVVAKVIDVMHTSGIASVGLLTPDLEKGL
Ga0209419_105271713300027537Forest SoilDAAVEFQVVAKVIDVMQAAGISSVGLLTPQLEQGH
Ga0209220_100916813300027587Forest SoilKLRAFRVAFIRGDAPVEFGVVAKVIDALHTSGIASVGLLTPDLEKGL
Ga0209329_104225423300027605Forest SoilERLGNRIEEVFKLRATRVAFVRGDGTVEFGVVAKVLDVMQSSGIASVGLLTPDLEKGL
Ga0208988_109184423300027633Forest SoilGDAPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGL
Ga0209076_106742623300027643Vadose Zone SoilDQPVEFGVVAQVIDVMHTSGIASVGLLTPDLEKGL
Ga0209388_105833313300027655Vadose Zone SoilDAPVEFGVVAKVIDALHTSGIASVGLLTPDLEKGL
Ga0209180_1003433213300027846Vadose Zone SoilAFIRGESPVEFGVVAKVIDVMQTAGIASIGLLTPELEKGH
Ga0209180_1006581013300027846Vadose Zone SoilQRATRVAFIRGDAPVEFGVVASVIDVMHTSGIASVGLLTPDLERVL
Ga0209067_1005193933300027898WatershedsIKGDGVVEFAKVASVIDVMHSSGVDSVGLLTPELEKGL
Ga0209488_1068075623300027903Vadose Zone SoilRATRVAFIRGDKPVEFGVVAKVIDVMHVSGVASVGLLTPELENAF
Ga0209006_1002199713300027908Forest SoilGDSGIEFQVVAKVIDVMDAAGISSVGLLTPQLEKGR
Ga0170834_10831464613300031057Forest SoilVAFVRGENPVEFQAVAQVIDDMRAAGISSVGLLTPELDLNH
Ga0170824_10181504313300031231Forest SoilHIAFIRGDRPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGF
Ga0307474_1077965013300031718Hardwood Forest SoilSRTNHTAFIRGGAAVEFQVVAKVIDVMQAAGISSVGLLTPRLERGHSAR
Ga0307473_1055133913300031820Hardwood Forest SoilLRATRVAFIRGDGPVEFGVVANVIDVMHTSGIASVGLLTPDLEKGLGQF
Ga0307473_1069992123300031820Hardwood Forest SoilATRVAFVRGDGTVEFGVVAKVLDVMQSSGVASVGLLTPDLEKGL
Ga0307473_1114118513300031820Hardwood Forest SoilTAFVRGDAPVEFAVVARVIDSMRGAGIVTVGLLTPELEKDSRTR
Ga0307479_1031882713300031962Hardwood Forest SoilAFIRGAAAVEFQLFAKVIDVMQAAGISSVGLLTPRLEQGHSAR
Ga0306924_1066584723300032076SoilLKQVFELRASRAAFVRGEAPVEFAVIARVIDTLHSAGVTSVGLLTPELEKGR
Ga0307470_1026630013300032174Hardwood Forest SoilVRGDASVEFQVVAKVIDVMQSAGISSVGLLTPQLERVASNGH
Ga0307471_10061274513300032180Hardwood Forest SoilKQRASRIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPDLDKGL
Ga0307471_10153581813300032180Hardwood Forest SoilRAARIAFIRGDGPVEFGVVAKVIDVMHTSGIASVGLLTPGLEKGL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.