Metagenome / Metatranscriptome Family F088859

Basic Information
Family ID	F088859
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	59 residues
Representative Sequence	VETLTLRVAELVVERQELRIRGASTASLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Number of Associated Samples	96
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.21 %
% of genes near scaffold ends (potentially truncated)	46.79 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Bacteria (82.569 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.771 % of family members)
Environment Ontology (ENVO)	Unclassified (27.523 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.872 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.14% β-sheet: 0.00% Coil/Unstructured: 48.86%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.24.1.1: Apolipoprotein	d1gs9a_	1gs9	0.89716
e.29.1.2: RNA-polymerase beta-prime	d4g7hd_	4g7h	0.89188
f.5.1.0: automated matches	d3pika_	3pik	0.88609
a.25.1.1: Ferritin	d4iwka_	4iwk	0.88018
f.5.1.0: automated matches	d1yc9a_	1yc9	0.87872

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07690	MFS_1	29.36
PF02789	Peptidase_M17_N	22.94
PF07676	PD40	6.42
PF02036	SCP2	5.50
PF07992	Pyr_redox_2	4.59
PF09678	Caa3_CtaG	1.83
PF02786	CPSase_L_D2	1.83
PF02771	Acyl-CoA_dh_N	0.92
PF13191	AAA_16	0.92
PF07883	Cupin_2	0.92
PF00364	Biotin_lipoyl	0.92
PF00701	DHDPS	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	22.94
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.83
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.57 %
Unclassified	root	N/A	17.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.57 %
Unclassified	root	N/A	17.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.57 %
Unclassified	root	N/A	17.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.77 %
Unclassified	root	N/A	17.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.85 %
Unclassified	root	N/A	17.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.43 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.17 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.59 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.92 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.17 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.67 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.17 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.83 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.17 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.83 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.92 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig96714	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig802597	Not Available	1310	Open in IMG/M
3300000891\|JGI10214J12806_11714388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300000956\|JGI10216J12902_116177706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300004114\|Ga0062593_100260421	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300004153\|Ga0063455_100364133	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300004479\|Ga0062595_100967813	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005181\|Ga0066678_10961080	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005332\|Ga0066388_101102919	Not Available	1344	Open in IMG/M
3300005341\|Ga0070691_10181890	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300005355\|Ga0070671_101445334	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005459\|Ga0068867_102099621	Not Available	535	Open in IMG/M
3300005468\|Ga0070707_100216797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1865	Open in IMG/M
3300005526\|Ga0073909_10100291	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005536\|Ga0070697_100539467	Not Available	1022	Open in IMG/M
3300006574\|Ga0074056_10816821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300006852\|Ga0075433_10371176	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300006854\|Ga0075425_101291204	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300007076\|Ga0075435_102031210	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009137\|Ga0066709_100834209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1338	Open in IMG/M
3300009789\|Ga0126307_10000042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	67259	Open in IMG/M
3300009840\|Ga0126313_10628802	Not Available	866	Open in IMG/M
3300010039\|Ga0126309_10070156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1731	Open in IMG/M
3300010039\|Ga0126309_10369308	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300010040\|Ga0126308_10000698	All Organisms → cellular organisms → Bacteria	11935	Open in IMG/M
3300010042\|Ga0126314_10150738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1619	Open in IMG/M
3300010304\|Ga0134088_10467381	Not Available	619	Open in IMG/M
3300010337\|Ga0134062_10530343	Not Available	596	Open in IMG/M
3300010364\|Ga0134066_10326291	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010371\|Ga0134125_11428370	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300010373\|Ga0134128_10660433	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300010396\|Ga0134126_12513930	Not Available	560	Open in IMG/M
3300010999\|Ga0138505_100031638	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300011000\|Ga0138513_100059104	Not Available	586	Open in IMG/M
3300011003\|Ga0138514_100030076	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300011994\|Ga0120157_1050999	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300011996\|Ga0120156_1039615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300012019\|Ga0120139_1064442	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300012201\|Ga0137365_10902265	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012204\|Ga0137374_10002858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20211	Open in IMG/M
3300012204\|Ga0137374_10052970	All Organisms → cellular organisms → Bacteria	4157	Open in IMG/M
3300012204\|Ga0137374_11031815	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012206\|Ga0137380_10893341	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300012211\|Ga0137377_10421630	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012354\|Ga0137366_10394912	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300012938\|Ga0162651_100039580	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012955\|Ga0164298_11504092	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012989\|Ga0164305_11762118	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300014326\|Ga0157380_12152214	Not Available	621	Open in IMG/M
3300014745\|Ga0157377_10708583	Not Available	732	Open in IMG/M
3300014829\|Ga0120104_1033794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	937	Open in IMG/M
3300015359\|Ga0134085_10587317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300015371\|Ga0132258_12266358	Not Available	1363	Open in IMG/M
3300015373\|Ga0132257_103082160	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300015374\|Ga0132255_106018562	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300018027\|Ga0184605_10007088	All Organisms → cellular organisms → Bacteria	4152	Open in IMG/M
3300018027\|Ga0184605_10125998	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300018027\|Ga0184605_10131317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1120	Open in IMG/M
3300018051\|Ga0184620_10012815	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300018051\|Ga0184620_10026375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300018054\|Ga0184621_10105786	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300018054\|Ga0184621_10147110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300018061\|Ga0184619_10023733	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300018061\|Ga0184619_10045884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1889	Open in IMG/M
3300018071\|Ga0184618_10009330	All Organisms → cellular organisms → Bacteria	2905	Open in IMG/M
3300018071\|Ga0184618_10131991	Not Available	1007	Open in IMG/M
3300018073\|Ga0184624_10055216	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300018074\|Ga0184640_10424292	Not Available	595	Open in IMG/M
3300019887\|Ga0193729_1148341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300020005\|Ga0193697_1010747	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300020059\|Ga0193745_1017598	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300021080\|Ga0210382_10032923	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300021413\|Ga0193750_1003969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3931	Open in IMG/M
3300022534\|Ga0224452_1157454	Not Available	699	Open in IMG/M
3300022756\|Ga0222622_10058745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2208	Open in IMG/M
3300025899\|Ga0207642_10518545	Not Available	732	Open in IMG/M
3300025907\|Ga0207645_10172673	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300025915\|Ga0207693_11460767	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300025924\|Ga0207694_11517134	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300025933\|Ga0207706_10010184	All Organisms → cellular organisms → Bacteria	8603	Open in IMG/M
3300025972\|Ga0207668_10164765	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300025972\|Ga0207668_10195857	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300028709\|Ga0307279_10110549	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300028711\|Ga0307293_10146464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300028712\|Ga0307285_10219887	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300028720\|Ga0307317_10112976	Not Available	904	Open in IMG/M
3300028721\|Ga0307315_10057162	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300028722\|Ga0307319_10132480	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300028754\|Ga0307297_10021576	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300028784\|Ga0307282_10252834	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300028791\|Ga0307290_10325296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300028793\|Ga0307299_10297868	Not Available	606	Open in IMG/M
3300028807\|Ga0307305_10009194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4322	Open in IMG/M
3300028807\|Ga0307305_10056426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1809	Open in IMG/M
3300028824\|Ga0307310_10052081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1712	Open in IMG/M
3300028872\|Ga0307314_10280621	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300028878\|Ga0307278_10105769	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300028880\|Ga0307300_10000999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6943	Open in IMG/M
3300028880\|Ga0307300_10080595	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300028885\|Ga0307304_10398241	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300028889\|Ga0247827_10648853	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300028889\|Ga0247827_10830928	Not Available	614	Open in IMG/M
3300031226\|Ga0307497_10497924	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031548\|Ga0307408_101708843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300031716\|Ga0310813_11038273	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031938\|Ga0308175_100010071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	7054	Open in IMG/M
3300032205\|Ga0307472_100389899	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300032828\|Ga0335080_12389010	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300033412\|Ga0310810_10426696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.40%
Host-Associated	Host-Associated	15.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.81%
Plants	Host-Associated → Plants	15.60%
Aquatic	Environmental → Aquatic	14.68%
Unclassified	Environmental → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.14%
Sediment	Environmental → Aquatic → Sediment	13.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.59%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	3.67%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Unclassified	Environmental → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.42%
Loam	Environmental → Terrestrial → Soil → Loam	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	3.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	3.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01396780	2124908016		AEELTTIIGQLVAQRQELRARGASEASLERNRMQIARAQWELAHALIDRYLPEPAAQSAA
KansclcFeb2_09040350	2124908045	Soil	VEALTLRVAELVAERQQLRDRDASDTALERNRIQIARAQWELGQALIDRYLPAEQPVV
JGI10214J12806_117143882	3300000891	Soil	GAGASVEALTLRVAGLVAERQQLRERGASQTALERNRIQLARAQWELSHALIDRHLPAARPAA*
JGI10216J12902_1161777062	3300000956	Soil	MSVEALTVRIAVLVAERQELRVSGAAEAAIERNRLQIARAQWELAHALIERHLPAEQTAA
Ga0062593_1002604212	3300004114	Soil	VEALTLRVAGLVAERQQLRERGASQTALERNRIQLARAQWELSHALIDRHLPAARPAA*
Ga0063455_1003641332	3300004153	Soil	MRVAGLVAERQELRDRLASDAALERNRRQIARAQWELGHALIDRHLPQPAAQNVA*
Ga0062595_1009678132	3300004479	Soil	RGAASVEALTLRVAELVAERQQLRDRDASDTALERNRIQLARAQWELGQALIDRYLPAEQPVV*
Ga0066678_109610801	3300005181	Soil	VEVLTVRIAALVAERQELRVSGAATATIERNRLQIARAQWDLSHALIERHLPAAQTAA*
Ga0066388_1011029192	3300005332	Tropical Forest Soil	LLIAGLVVERQGLRGRGAGAAALERNRVRLARAQWELGHALIERHLPQPATRSAA*
Ga0070691_101818902	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VEHLTLQIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0070671_1014453341	3300005355	Switchgrass Rhizosphere	VEALTLRISLLVEERQQLRESGASETSIERNRVQLARAQWELAHALIDRYLPEPVEQPAA
Ga0068867_1020996211	3300005459	Miscanthus Rhizosphere	VENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQ
Ga0070707_1002167972	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPEPAEQLSA
Ga0073909_101002911	3300005526	Surface Soil	TLRVAELVSERQQLRDRGASETALERNRIQLVRAQWELGHALIDRHLPPVSQSVA*
Ga0070697_1005394672	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPEPAEQLSA
Ga0074056_108168212	3300006574	Soil	VGADSSVEALTLRISALVAERQELRDRGASESSLEKNRLQLARAQWELGHALIDRHLPEPAEQLSA*
Ga0075433_103711762	3300006852	Populus Rhizosphere	VEQLTLLITGLVAERQGLRNRGAGAAALERNRLRLARAQWELGHALIDRYLPQDSEQTAA
Ga0075425_1012912041	3300006854	Populus Rhizosphere	LTLLISALVAERQQLRDRGASETMLERNRVQLARAQWELGHALIDRHLPDPAAQPAA*
Ga0075435_1020312102	3300007076	Populus Rhizosphere	TRADVEQLTLLITGLVAERQGLRNRGAGAAALERNRLRLARAQWELGHALIDRYLPQDSEQTAA*
Ga0066709_1008342092	3300009137	Grasslands Soil	VEVLTVRIAALVAERQELRVSGAATAAIERNRLQIARAQWELSHALIERHLPAAQTAA*
Ga0126307_1000004279	3300009789	Serpentine Soil	VEALTLRVAQLVVERQELRIRGASAASLERNRLQIARAQWELGHALIERYLPRPAARRAA
Ga0126313_106288021	3300009840	Serpentine Soil	VEALTLRVAGLVAQRQELRVRGASAASLERNRLQIARAQWELGHALIDRYLPQPAARSAA
Ga0126309_100701562	3300010039	Serpentine Soil	VEVLTLRVAQLVVERQELRIQGASAVSLERNRLQIARAQWELGHALIDRYLQDPAAQSAA
Ga0126309_103693082	3300010039	Serpentine Soil	MRVAGLVAERQELRDRQASDAALERNRRQIARAQWELGHALIDRHLPQPAAQNVA*
Ga0126308_1000069811	3300010040	Serpentine Soil	VEALTLRVAQLVVERQELRIRGASTVSLERNRLQIAHAQWELGHALIDRHLPEPAAQSAA
Ga0126314_101507383	3300010042	Serpentine Soil	AARIAILVAERQRLRARGAGEASLERNRLQLARAQWELGHALIDRHLPGEQAVA*
Ga0134088_104673811	3300010304	Grasslands Soil	VEVLTVRIAALVAERQELRVSGAATAPIERNRPQIARAQWDLSHALIERHLPAERTAA*
Ga0134062_105303432	3300010337	Grasslands Soil	VEVLTVRIAALVAERQELRVSGAATAAIERNRLQIARAQWDLSHALIERHLPAAQTAA*
Ga0134066_103262912	3300010364	Grasslands Soil	SRTSVEALTLRVGVLVAERQELRDRGASATALERNRLQLARAQWELSHALIERYLPASEAA*
Ga0134125_114283701	3300010371	Terrestrial Soil	SGASVEALTLRLGLLVAERQQLRESGASAKALERNRLQLARAQWELSHALIDRHLPAAQPAA*
Ga0134128_106604332	3300010373	Terrestrial Soil	VEHPTLQIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0134126_125139302	3300010396	Terrestrial Soil	VEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDR
Ga0138505_1000316382	3300010999	Soil	VENLTLQIAGLVAERQALRARAASIPSLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0138513_1000591041	3300011000	Soil	VENLTLQIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0138514_1000300762	3300011003	Soil	VILVAELVAERQELRTTGAGATAIERNRLHLARAQWELGLALIERHLPETPAETAA*
Ga0120157_10509992	3300011994	Permafrost	VETLTLRVAELVVERQELRIRGASTASLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0120156_10396152	3300011996	Permafrost	VETLTLRVAELVVERQELRIRGASTASLERNRLQIARAQWELGLALIDRHLPEPAAQSAA
Ga0120139_10644422	3300012019	Permafrost	VETLTLRVAELVVERQELRIRGTSTASLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0137365_109022651	3300012201	Vadose Zone Soil	SRGRASVEALTVRIAVLVAERQELRVSGAAEAAIERNRLQIARAQWELAHALIEQHLTAAQTAA*
Ga0137374_100028588	3300012204	Vadose Zone Soil	VEALTLRIAELVAERQELRDRGAGDSGDSSLERNRLQIARAQWELGHALIDRHLPQPAARSAA*
Ga0137374_100529702	3300012204	Vadose Zone Soil	VEALTLRIAALVVERQQLRGANVGVADLERNRLEIARAQWELAHALIERHLPGRATQTAA
Ga0137374_110318152	3300012204	Vadose Zone Soil	VVERQQLRGANAGMAELERNRLQIARAQRELAQALIQRHLPGRAAQTAA*
Ga0137380_108933412	3300012206	Vadose Zone Soil	VRIATLVAERQELRGGGAATAAIERNRLQIARAQWELAHALIEQYLPAAQTAA*
Ga0137377_104216302	3300012211	Vadose Zone Soil	VETLTLRVAELVVERQELRIRGASSVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0137366_103949122	3300012354	Vadose Zone Soil	VEALTLRIAALVVERQQLRGANAGMAELERNRLQIARAQWELAHALIEQHLTAAQTAA*
Ga0162651_1000395802	3300012938	Soil	LTLQIAGLVAERQELRAHGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA*
Ga0164298_115040922	3300012955	Soil	RADSSVEALTLRISALVAERQQLRDRGASETLLERNRLQLARAPWELGHALIDRHLPEPAEQLSA*
Ga0164305_117621182	3300012989	Soil	ASVEALTLRVAELVSERQQLRERGASETALEKNRIQLVRAQWELGHALIDRHLPPVSQSVA*
Ga0157380_121522142	3300014326	Switchgrass Rhizosphere	VENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIERYLPQPATRSAA
Ga0157377_107085831	3300014745	Miscanthus Rhizosphere	VEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPEDAAQSAA
Ga0120104_10337941	3300014829	Permafrost	VEALTLRVAELVVERQELRMRCASNIALERNRLQIARAQWELGHALIDRYLPEPAAAQSAA*
Ga0134085_105873172	3300015359	Grasslands Soil	VLTIQIASLVAERQDLRVSGAAEAAIERNRRQIARAQWELSHALIERHLPAAQTAA*
Ga0132258_122663582	3300015371	Arabidopsis Rhizosphere	ADVEELTLLIAGLVAERQGLRSRGAGTGALERNRLRLARAQWELGHALIARHLPQPATRSAA*
Ga0132257_1030821601	3300015373	Arabidopsis Rhizosphere	LVAERQQLRDQGASEAMLERNRVQLARAQWELGHALIDRHLPDPAAQPAA*
Ga0132255_1060185622	3300015374	Arabidopsis Rhizosphere	IAGLVAERQGLRSRGAGTAALERNRLRLARAQWELGHALIERHLPRPATRSAA*
Ga0184605_100070882	3300018027	Groundwater Sediment	VRTTAEELTTRIGQLVAERQELRARGASEKSLERNRLQIARAQWELAHALIDRYLPEPAAQTAA
Ga0184605_101259982	3300018027	Groundwater Sediment	VETLTLRIGELVVERQELRIRGASTVSLERNRLLIARAQWELGHALIDRHLPEPAAQSAA
Ga0184605_101313171	3300018027	Groundwater Sediment	RSRSTVEALTLRVAQLVVERQELRIRGASTVSLERNRLQIARAQWELGHALIDRHLPEPAAQSTA
Ga0184620_100128152	3300018051	Groundwater Sediment	VEALTLRVAQLVVERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPATQSAA
Ga0184620_100263752	3300018051	Groundwater Sediment	MRIAELVGERQELRDRGARHGALERNRVQLARAQWELGHALIDRHLPEPVEQPA
Ga0184621_101057862	3300018054	Groundwater Sediment	VEALTLRVAQLVVERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0184621_101471102	3300018054	Groundwater Sediment	MRIAELVGERQELRDRGARHGALERNRVQLARAQWELGHALIERHLPERTQTAA
Ga0184619_100237332	3300018061	Groundwater Sediment	VEALTLRVAQLVVERQELRIRGANAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0184619_100458842	3300018061	Groundwater Sediment	MLTSRIAELVAERQELRDRGVGPAALERNRRQIARAHWELAHALIDRYRPESAARTAA
Ga0184618_100093302	3300018071	Groundwater Sediment	VRTTAEELTTRIGRLVAERQELRARGASEKALERNRLQIARAQWELAHALIDRYLPEPAAQTAA
Ga0184618_101319912	3300018071	Groundwater Sediment	VEALTLRVAQLVVERQELRIRGASTVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0184624_100552162	3300018073	Groundwater Sediment	VENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0184640_104242921	3300018074	Groundwater Sediment	LHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0193729_11483412	3300019887	Soil	VETLTLRVAELVVDRQELRIRGASTASLERNRLQIARAQWELGLALIDRHLPEPAAQSAA
Ga0193697_10107471	3300020005	Soil	LRGAELVAERQQLRERGANDTALERNRIQIARAQWELGHALIDRHLQPASQSAA
Ga0193745_10175983	3300020059	Soil	VEALTLRVAELVVERQELRIRGAGTVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0210382_100329232	3300021080	Groundwater Sediment	VEVLTLRIGELVVERQELRIRGASTVSLERNRLLIARAQWELGHALIDRHLPEPAAQSAA
Ga0193750_10039692	3300021413	Soil	VEALTLRVAELVVERQELRIRGGSMVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0224452_11574542	3300022534	Groundwater Sediment	VENLTLHIAGLVAERQELRARGASNAPLERNRLQIARAQWELGHALIERYLPQPAARSAA
Ga0222622_100587452	3300022756	Groundwater Sediment	VEALTLRVAQLVVERQELRIRGATAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0207642_105185452	3300025899	Miscanthus Rhizosphere	VENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAA
Ga0207645_101726731	3300025907	Miscanthus Rhizosphere	VEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPEAAAQSAA
Ga0207693_114607672	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RISTLVAERQQLRDRGASESSLERNRLQLARAQWELGHALIDRHLPQAAAQSAA
Ga0207694_115171342	3300025924	Corn Rhizosphere	LTLRISLLVEERQQLRERCASETSIERNRVQLARAQWELAHALIDRHLPDSAEQPAA
Ga0207706_100101842	3300025933	Corn Rhizosphere	VENLTLHIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0207668_101647651	3300025972	Switchgrass Rhizosphere	VEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSA
Ga0207668_101958571	3300025972	Switchgrass Rhizosphere	LRPARFRRSRTRADVEHLTLQIAGLVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0307279_101105491	3300028709	Soil	VERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0307293_101464642	3300028711	Soil	VRTTAEELTTRIGRLVAERQELRARGASEKSLERNRLQIARAQCELAHALIDRYLPEPAAQTAA
Ga0307285_102198871	3300028712	Soil	AVASVELLTLRVAELVAERQQLRERGANDTALERNRIQIARAQWELGHALIDRHLQPASQSAA
Ga0307317_101129762	3300028720	Soil	VEHLTLQIAGLVAERQELRAHGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0307315_100571622	3300028721	Soil	HLRPARFRRSRTRADVENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0307319_101324801	3300028722	Soil	RVAQLVVERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0307297_100215764	3300028754	Soil	ASVEALTLRVAELVSERQQLRERGASETALEKNRIQLARAQWELGHALIDRHLQPASQSA
Ga0307282_102528341	3300028784	Soil	VLRIAELVVERQELRTTGAGAMAIERNRLQLARAQWELGHALIDRHLPEPAQTAA
Ga0307290_103252961	3300028791	Soil	VRTTAEELTTRIGQLVAERQELRARGAGVKALERNRLQIARAQWELAHALIDRYLPEPAA
Ga0307299_102978682	3300028793	Soil	VETLTLRVAELVVERQELRLRGASNTSLERNRLQIARAQWELGHALIDRYLPEPASA
Ga0307305_100091941	3300028807	Soil	VRTTAEELTTRIGQLVAERQELRARGASEKALERNRLQIARAQWELAHALIDRYLPEPAAQTAA
Ga0307305_100564261	3300028807	Soil	LTLRVAQLVVERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPATQSAA
Ga0307310_100520811	3300028824	Soil	LVVERQELRIRGASAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0307314_102806212	3300028872	Soil	VVERQELRVRGANAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0307278_101057692	3300028878	Soil	LTLQIAGLVAERQELRAHGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0307300_100009992	3300028880	Soil	MRIAELVGERQELRDRCARHGALERNRVQLARAQWELGHALIERHLPERTQTAA
Ga0307300_100805952	3300028880	Soil	PSRFRRGRGRTTAEELTARIGQLVAERQELRARGASEASLERNRMQIARAQWELAHALIDRYLPEPAAQTAA
Ga0307304_103982411	3300028885	Soil	RIAELVGERQELRDRGARHGALERNRVQLARAQWELGHALIERHLPERTQTAA
Ga0247827_106488532	3300028889	Soil	LVAERQELRVRGASIASLERNRLQIARAQWELGHALIDRHLPEAAAQSAA
Ga0247827_108309282	3300028889	Soil	VEALTLRVAQLVVERQELRMRGAGAVSLERNRLQIARAQWELGHALIDRHLPEPAAQSAA
Ga0307497_104979241	3300031226	Soil	LRVAELVSERQRLRERGASETALEKNRIQLVRAQWELGHALIDRHLPAAQPAA
Ga0307408_1017088432	3300031548	Rhizosphere	VETLTLRISALVAERQTLRAKGGSLAALERNRVQIARAQWELGHALIDRYLPPAPAKTAA
Ga0310813_110382732	3300031716	Soil	RRADSSVEALTLLISALVAERQQLRDRGASETMLERNRVQLARAQWELGHALIERHLPDPAAQPAA
Ga0308175_1000100714	3300031938	Soil	VDNLTLQIAGLVVERQELRARGASIASLERNRLQIARAQWELGHALIERYLLRPATRSAA
Ga0307472_1003898991	3300032205	Hardwood Forest Soil	RSRTRADVENLTLHIAGLVAERQELRARGASIASLERNRLQIARAQWELGHALIDRHLPQAAAQSAA
Ga0335080_123890102	3300032828	Soil	TVEELAVRLEALVAERQKLRGRAASARALERNRLQIARAQWELSHLLIDRYLPAA
Ga0310810_104266961	3300033412	Soil	RRRADSSVEALTLLISALVAERQQLRDRGASETMLERNRVQLARAQWELGHALIDRHLPDPAAQPAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088859

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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