Metagenome Family F088899

Basic Information
Family ID	F088899
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	83 residues
Representative Sequence	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKEIVEVCQKMIKAEYL
Number of Associated Samples	89
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.21 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (62.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (65.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.972 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.65% β-sheet: 37.65% Coil/Unstructured: 44.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00535	Glycos_transf_2	2.75
PF02557	VanY	1.83
PF13671	AAA_33	0.92
PF13564	DoxX_2	0.92
PF00149	Metallophos	0.92
PF05050	Methyltransf_21	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	1.83
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	1.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
All Organisms	root	All Organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Viruses	superkingdom	All Organisms → Viruses	36.70 %
cellular organisms	root	All Organisms → cellular organisms	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.92 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.03 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.92 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2200022601	Not Available	781	Open in IMG/M
3300000756\|JGI12421J11937_10033988	All Organisms → Viruses → Predicted Viral	1802	Open in IMG/M
3300001275\|B570J13894_1008442	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300002396\|B570J29629_1004614	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300002835\|B570J40625_100438555	All Organisms → Viruses → Predicted Viral	1252	Open in IMG/M
3300004240\|Ga0007787_10260775	Not Available	853	Open in IMG/M
3300005527\|Ga0068876_10513781	Not Available	657	Open in IMG/M
3300005528\|Ga0068872_10557364	Not Available	611	Open in IMG/M
3300005581\|Ga0049081_10135808	Not Available	905	Open in IMG/M
3300005662\|Ga0078894_10827030	Not Available	808	Open in IMG/M
3300005662\|Ga0078894_11056996	Not Available	695	Open in IMG/M
3300005662\|Ga0078894_11219760	Not Available	636	Open in IMG/M
3300005805\|Ga0079957_1015476	Not Available	5528	Open in IMG/M
3300006484\|Ga0070744_10030937	All Organisms → Viruses → Predicted Viral	1583	Open in IMG/M
3300007974\|Ga0105747_1112275	Not Available	858	Open in IMG/M
3300008107\|Ga0114340_1033179	All Organisms → Viruses → Predicted Viral	2352	Open in IMG/M
3300008107\|Ga0114340_1056972	All Organisms → Viruses → Predicted Viral	1691	Open in IMG/M
3300008107\|Ga0114340_1126233	Not Available	982	Open in IMG/M
3300008107\|Ga0114340_1242871	Not Available	557	Open in IMG/M
3300008108\|Ga0114341_10108549	All Organisms → Viruses → Predicted Viral	1674	Open in IMG/M
3300008110\|Ga0114343_1077508	All Organisms → Viruses → Predicted Viral	1202	Open in IMG/M
3300008110\|Ga0114343_1085674	All Organisms → Viruses → Predicted Viral	1122	Open in IMG/M
3300008110\|Ga0114343_1186491	Not Available	617	Open in IMG/M
3300008113\|Ga0114346_1213399	Not Available	757	Open in IMG/M
3300008113\|Ga0114346_1245041	Not Available	672	Open in IMG/M
3300008120\|Ga0114355_1118650	All Organisms → Viruses → Predicted Viral	1001	Open in IMG/M
3300008120\|Ga0114355_1133985	Not Available	908	Open in IMG/M
3300008262\|Ga0114337_1280811	Not Available	612	Open in IMG/M
3300008267\|Ga0114364_1151855	Not Available	636	Open in IMG/M
3300008267\|Ga0114364_1189446	Not Available	517	Open in IMG/M
3300008450\|Ga0114880_1013217	All Organisms → Viruses → Predicted Viral	4012	Open in IMG/M
3300008459\|Ga0114865_1177464	Not Available	620	Open in IMG/M
3300009081\|Ga0105098_10126729	All Organisms → Viruses → Predicted Viral	1126	Open in IMG/M
3300009158\|Ga0114977_10037837	All Organisms → Viruses → Predicted Viral	3012	Open in IMG/M
3300009159\|Ga0114978_10303525	Not Available	977	Open in IMG/M
3300009164\|Ga0114975_10252399	Not Available	986	Open in IMG/M
3300009165\|Ga0105102_10335247	Not Available	791	Open in IMG/M
3300009169\|Ga0105097_10627322	Not Available	606	Open in IMG/M
3300009183\|Ga0114974_10256490	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300009184\|Ga0114976_10240030	All Organisms → Viruses	985	Open in IMG/M
3300010354\|Ga0129333_10752905	Not Available	834	Open in IMG/M
3300010354\|Ga0129333_11680744	Not Available	517	Open in IMG/M
3300011337\|Ga0153702_1001	Not Available	276376	Open in IMG/M
3300013004\|Ga0164293_10313737	All Organisms → Viruses → Predicted Viral	1082	Open in IMG/M
3300013005\|Ga0164292_10522363	Not Available	775	Open in IMG/M
3300013005\|Ga0164292_10887009	Not Available	560	Open in IMG/M
3300013006\|Ga0164294_10976953	Not Available	569	Open in IMG/M
3300013014\|Ga0164295_11508703	Not Available	521	Open in IMG/M
3300017722\|Ga0181347_1008653	All Organisms → Viruses → Predicted Viral	3317	Open in IMG/M
3300017754\|Ga0181344_1054664	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
3300017754\|Ga0181344_1218229	Not Available	532	Open in IMG/M
3300017754\|Ga0181344_1241650	Not Available	501	Open in IMG/M
3300017766\|Ga0181343_1089751	Not Available	877	Open in IMG/M
3300017778\|Ga0181349_1250583	Not Available	591	Open in IMG/M
3300020048\|Ga0207193_1019994	Not Available	8455	Open in IMG/M
3300020151\|Ga0211736_10440224	Not Available	1704	Open in IMG/M
3300020161\|Ga0211726_10234999	All Organisms → Viruses → Predicted Viral	1162	Open in IMG/M
3300020492\|Ga0208483_1020131	Not Available	757	Open in IMG/M
3300020499\|Ga0208084_1028367	Not Available	571	Open in IMG/M
3300020501\|Ga0208590_1028025	Not Available	623	Open in IMG/M
3300020510\|Ga0208086_1012511	All Organisms → Viruses → Predicted Viral	1296	Open in IMG/M
3300020511\|Ga0208593_1003114	All Organisms → Viruses → Predicted Viral	2203	Open in IMG/M
3300020519\|Ga0208223_1027185	Not Available	750	Open in IMG/M
3300020528\|Ga0208224_1018222	All Organisms → Viruses → Predicted Viral	1000	Open in IMG/M
3300020530\|Ga0208235_1043251	Not Available	526	Open in IMG/M
3300020547\|Ga0208361_1025866	Not Available	805	Open in IMG/M
3300020549\|Ga0207942_1004807	All Organisms → Viruses → Predicted Viral	1982	Open in IMG/M
3300020550\|Ga0208600_1045463	Not Available	664	Open in IMG/M
3300020555\|Ga0208358_1034467	Not Available	791	Open in IMG/M
3300020564\|Ga0208719_1065720	Not Available	634	Open in IMG/M
3300020572\|Ga0207909_1032796	Not Available	872	Open in IMG/M
3300021140\|Ga0214168_1062731	Not Available	853	Open in IMG/M
3300021141\|Ga0214163_1020838	All Organisms → Viruses → Predicted Viral	1973	Open in IMG/M
3300022407\|Ga0181351_1113923	All Organisms → Viruses → Predicted Viral	1025	Open in IMG/M
3300022407\|Ga0181351_1247947	Not Available	557	Open in IMG/M
3300024346\|Ga0244775_10053156	All Organisms → Viruses → Predicted Viral	3519	Open in IMG/M
3300027631\|Ga0208133_1023127	All Organisms → Viruses → Predicted Viral	1594	Open in IMG/M
3300027659\|Ga0208975_1181638	Not Available	571	Open in IMG/M
3300027734\|Ga0209087_1143899	All Organisms → Viruses	964	Open in IMG/M
3300027769\|Ga0209770_10111506	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300027782\|Ga0209500_10184989	All Organisms → Viruses	952	Open in IMG/M
3300027816\|Ga0209990_10334179	Not Available	671	Open in IMG/M
3300031784\|Ga0315899_10663529	Not Available	975	Open in IMG/M
3300031786\|Ga0315908_10918019	Not Available	709	Open in IMG/M
3300031787\|Ga0315900_10769557	Not Available	669	Open in IMG/M
3300031787\|Ga0315900_10995063	Not Available	552	Open in IMG/M
3300031857\|Ga0315909_10093713	All Organisms → Viruses → Predicted Viral	2611	Open in IMG/M
3300031857\|Ga0315909_10289047	All Organisms → Viruses → Predicted Viral	1233	Open in IMG/M
3300031951\|Ga0315904_10039841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5358	Open in IMG/M
3300031951\|Ga0315904_10643790	Not Available	903	Open in IMG/M
3300031951\|Ga0315904_11314331	Not Available	546	Open in IMG/M
3300032093\|Ga0315902_10835935	Not Available	721	Open in IMG/M
3300033981\|Ga0334982_0288818	Not Available	776	Open in IMG/M
3300033992\|Ga0334992_0073708	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1875	Open in IMG/M
3300033993\|Ga0334994_0149282	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300033996\|Ga0334979_0029449	All Organisms → Viruses → Predicted Viral	3663	Open in IMG/M
3300034064\|Ga0335001_0351655	Not Available	797	Open in IMG/M
3300034072\|Ga0310127_027885	All Organisms → Viruses → Predicted Viral	3237	Open in IMG/M
3300034073\|Ga0310130_0000954	Not Available	17506	Open in IMG/M
3300034103\|Ga0335030_0251914	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300034109\|Ga0335051_0206110	Not Available	982	Open in IMG/M
3300034279\|Ga0335052_0165546	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300034283\|Ga0335007_0445117	Not Available	795	Open in IMG/M
3300034284\|Ga0335013_0238961	All Organisms → Viruses → Predicted Viral	1184	Open in IMG/M
3300034284\|Ga0335013_0702951	Not Available	576	Open in IMG/M
3300034356\|Ga0335048_0081222	Not Available	1994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.17%
Terrestrial	Environmental → Terrestrial	1.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.66%
Marine	Environmental → Aquatic → Marine	5.50%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.04%
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.78%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.75%
Coastal	Environmental → Aquatic → Marine → Coastal	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.83%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.12%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	17.43%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.43%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.83%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	17.43%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	17.43%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	14.68%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	13.76%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	9.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.75%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.75%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.75%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.83%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.92%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.92%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.92%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001275	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300002396	Freshwater microbial communities from Lake Mendota, WI - 13OCT2010 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008459	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - July 8, 2014 all contigs	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011337	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Ilsan	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020492	Freshwater microbial communities from Lake Mendota, WI - 01JUN2011 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020499	Freshwater microbial communities from Lake Mendota, WI - 14SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020501	Freshwater microbial communities from Lake Mendota, WI - 27SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020510	Freshwater microbial communities from Lake Mendota, WI - 06JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020550	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020555	Freshwater microbial communities from Lake Mendota, WI - 10AUG2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020564	Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200232066	2199352005	Freshwater	MTDFIYKMDRMDNDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
JGI12421J11937_100339881	3300000756	Freshwater And Sediment	MTDFIYKMDRMDDNIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMINGGE*
B570J13894_10084422	3300001275	Freshwater	MTDFIYKMDRMDNDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL*
B570J29629_10046142	3300002396	Freshwater	MDNDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL*
B570J40625_1004385552	3300002835	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA*
Ga0007787_102607751	3300004240	Freshwater Lake	DNFIFICSECIFIHMTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0068876_105137812	3300005527	Freshwater Lake	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIERLYEVVDYEITPKEIVEVCQKMIKNGGA*
Ga0068872_105573642	3300005528	Freshwater Lake	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIERLYEVVDYEITPKQIVEVCQNMIKNGGA*
Ga0049081_101358083	3300005581	Freshwater Lentic	MTDFIYKMDRMDDNIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMING
Ga0078894_108270302	3300005662	Freshwater Lake	YKMDKIEEGRIRFIISFNEEEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKDIVEVCQKMIKGGE*
Ga0078894_110569961	3300005662	Freshwater Lake	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPLSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMIKGGK*
Ga0078894_112197602	3300005662	Freshwater Lake	MYHSFTLFTNVDILINMTDFIYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIEKLYEVSDYEIFPKDIVEVCQKMIRGEYL*
Ga0079957_10154762	3300005805	Lake	MTDFIYKMDKMEEGRIRFIISFNEEEVGSLYFEKAKKIFHRKPVSMDSWVCVDAKIERLYEVSDYDIFPKEIVEVCQKMIRESLSFGQPSIDSVNEPTEE*
Ga0070744_100309373	3300006484	Estuarine	MTDFIYKMDKMEDTSDGRSADRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEIIPKEIVEVCQKMIKAEYL*
Ga0105747_11122752	3300007974	Estuary Water	MTDFIYKMDSIEDGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA*
Ga0114340_10331794	3300008107	Freshwater, Plankton	MKDFVYKMDSIEEGRIRFIVSFNDQEVGSLCFEKAKKVFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0114340_10569721	3300008107	Freshwater, Plankton	MTDFIYKMDKMENDIIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKTEYL*
Ga0114340_11262332	3300008107	Freshwater, Plankton	MTDFIYKMDKMEDRIRFIISFNEQEVGSLYFEKAKRGFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKAEYL*
Ga0114340_12428711	3300008107	Freshwater, Plankton	YHSFTLFTNVDILINMTDFIYKMDSIEDGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA*
Ga0114341_101085491	3300008108	Freshwater, Plankton	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKEIVEVCQKMIKNGGA*
Ga0114343_10775081	3300008110	Freshwater, Plankton	MTDFIYKMDSIEDGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0114343_10856741	3300008110	Freshwater, Plankton	MTDFIYKMDKMDEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKAEYL*
Ga0114343_11864911	3300008110	Freshwater, Plankton	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKMTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKTEYL*
Ga0114346_12133992	3300008113	Freshwater, Plankton	MTDFIYKMDKMEDRIRFIISFNEQEVGSLYFEKAKRGFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVETCQKMIKAEYL*
Ga0114346_12450411	3300008113	Freshwater, Plankton	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIERLYEVVDYEITPKEIVEVCQNMIKNGGA*
Ga0114355_11186502	3300008120	Freshwater, Plankton	MFIHMKDFIYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0114355_11339852	3300008120	Freshwater, Plankton	MTDFIYKMDKMEDRIRFIISFNEQEVGSLYFEKAKMTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVETCQKMIKAEYL*
Ga0114337_12808112	3300008262	Freshwater, Plankton	MTDFVYKMDKIEEGRIRFIISLKEQEVGSLYFEKAKRGFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKAEYL*
Ga0114364_11518552	3300008267	Freshwater, Plankton	MTDFIYKMDSIEEGRIRFIISFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMI
Ga0114364_11894462	3300008267	Freshwater, Plankton	MTDFIYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIEKLYEVSDYEIFPKDIVEVCQKMIKGEYL*
Ga0114880_10132174	3300008450	Freshwater Lake	MFINMTDLLYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIEKLYEVVDYEITPKQIVEVCQNMIKNGGV*
Ga0114865_11774642	3300008459	Freshwater Lake	MTDFIYKMDSIEDGRIRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA*
Ga0105098_101267291	3300009081	Freshwater Sediment	MTDFIYKMDKIEEGRIRFIVSLNEVEMGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKDIVEVCQKMIKGGE*
Ga0114977_100378374	3300009158	Freshwater Lake	MEDFVYKMDVIEEGRIRFIISLNEVEMGSLYFEKAKKRFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL*
Ga0114978_103035251	3300009159	Freshwater Lake	MEDFVYKMDVMEEGKIRFIIYLKEVEMGSLYFEKAKKGFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL*
Ga0114975_102523991	3300009164	Freshwater Lake	IFIHMEDFVYKMDVIEEGRIRFIISLNEVEMGSLYFEKAKKGFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL*
Ga0105102_103352472	3300009165	Freshwater Sediment	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVKVCQKMIKAEYL*
Ga0105097_106273221	3300009169	Freshwater Sediment	MTDFIYKMDRIDERIRFIITFNDQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL*
Ga0114974_102564901	3300009183	Freshwater Lake	KIRFIIYLKEVEMGSLYFEKAKKGFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL*
Ga0114976_102400301	3300009184	Freshwater Lake	FIHMEDFVYKMDVIEEGRIRFIISLNEVEMGSLYFEKAKKRFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL*
Ga0129333_107529052	3300010354	Freshwater To Marine Saline Gradient	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0129333_116807441	3300010354	Freshwater To Marine Saline Gradient	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKTFTNKPLSMDAWVCVDAKIERLYEVSDYEIFPKEIVEVCQKMIKAEYL*
Ga0153702_1001252	3300011337	Freshwater	MIDLVYIMEKVDDKIRFIISFNDQEVGSLYFERAKRTFQRKPVSMDAWVCVDAKIERLYEVSNYEIIPKEIVEVCQKMIKAEYL*
Ga0164293_103137372	3300013004	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEITPKQIVEVCQKMINGGE*
Ga0164292_105223631	3300013005	Freshwater	MTDFIYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL*
Ga0164292_108870092	3300013005	Freshwater	YKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEITPKQIVEVCQKMINGGE*
Ga0164294_109769531	3300013006	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVYDYEILTKKIVEVCKKMINGGE*
Ga0164295_115087031	3300013014	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKQIVEVCQKMINGGE*
Ga0181347_10086536	3300017722	Freshwater Lake	VDNFIFICSDVILINMTDFIYKMDRMEEGRIRFIVSLNEEEVGSLYFEKAKRGFTNKPVSMDAWVCVDAKIERLYEVSDYEIFPK
Ga0181344_10546641	3300017754	Freshwater Lake	MTDFIYKMDSIEDGRIQFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0181344_12182292	3300017754	Freshwater Lake	MTDFIYKMDKIEEGRIRFIVSFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKEEYL
Ga0181344_12416501	3300017754	Freshwater Lake	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEITPKQIVEICQKMINGGE
Ga0181343_10897512	3300017766	Freshwater Lake	MTDFRYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKEEYL
Ga0181349_12505832	3300017778	Freshwater Lake	IFIHMTDFIYKMDKIEEGRIRFIVSLKDEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEICQKMINGGE
Ga0207193_10199941	3300020048	Freshwater Lake Sediment	MTDFIYKMDRMDDNIIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKQIVEVCQKMINGGE
Ga0211736_104402243	3300020151	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWVCVDAKIERLYEVVDYEITPKEIVEVCQNMIKNGGA
Ga0211733_109434641	3300020160	Freshwater	RFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWVCVDAKIERLYEVVDYEITPKEIVEVCQNMIKNGGA
Ga0211726_102349992	3300020161	Freshwater	YVDNFIFICSPTMFYGMTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWVCVDAKIERLYEVVDYEITPKEIVEVCQNMIKNGGA
Ga0208483_10201311	3300020492	Freshwater	MDNDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0208084_10283671	3300020499	Freshwater	IIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0208590_10280252	3300020501	Freshwater	EEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKQIVEVCQKMINGGE
Ga0208086_10125111	3300020510	Freshwater	MDNDIIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0208593_10031143	3300020511	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0208223_10271851	3300020519	Freshwater	MTDFIYKMDKMEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0208224_10182222	3300020528	Freshwater	MDNDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKQIVEVCQKMINGGE
Ga0208235_10432512	3300020530	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0208361_10258661	3300020547	Freshwater	MTDFIYKMDSIEDGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIKGGE
Ga0207942_10048072	3300020549	Freshwater	MTDFIYKMDSIEDGRIRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA
Ga0208600_10454632	3300020550	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQNMIKNGGA
Ga0208358_10344672	3300020555	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKEIVEVCQKMIKAEYL
Ga0208719_10657202	3300020564	Freshwater	GRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKAEYL
Ga0207909_10327962	3300020572	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0214168_10627312	3300021140	Freshwater	QYVDNFIFICSECIFIHMTDFIYKMDSIEDGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0214163_10208383	3300021141	Freshwater	MTDFIYKMDSIEEGRIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0181351_11139232	3300022407	Freshwater Lake	MTDFIYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0181351_12479471	3300022407	Freshwater Lake	ICSACIFIHMEDFVYKMDVIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMINGGE
Ga0244775_100531561	3300024346	Estuarine	MEDTSDGRSADRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEIIPKEIVEVCQKMIKAEYL
Ga0208133_10231273	3300027631	Estuarine	MTDFIYKMDKMEDTSDGRSADRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEIIPKEIVEVCQKMIKAEYL
Ga0208975_11816381	3300027659	Freshwater Lentic	MTDFIYKMDRMDDNIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMINGG
Ga0209087_11438992	3300027734	Freshwater Lake	YKMDVIEEGRIRFIISLNEVEMGSLYFEKAKKRFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL
Ga0209770_101115061	3300027769	Freshwater Lake	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEITPKQIVEICQKMINGGE
Ga0209500_101849891	3300027782	Freshwater Lake	MEDFVYKMDVIEEGRIRFIISLNEVEMGSLYFEKAKKRFTNKPVSMDAWVCVDSKIGGLYEVSNYDITPKQIVERCQQIIKKSL
Ga0209990_103341792	3300027816	Freshwater Lake	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIERLYEVVDYEITPKEIVEVCQKMIKNGGA
Ga0315899_106635292	3300031784	Freshwater	MTDFIYKMDKMDEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKAEYL
Ga0315908_109180192	3300031786	Freshwater	MFINMTDLLYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIEKLYEVVDYEITPKQIVEVCQNMIKNGGV
Ga0315900_107695572	3300031787	Freshwater	MTDFIYKMDKMDEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKTEYL
Ga0315900_109950632	3300031787	Freshwater	MTDFIYKMDKMEDRIRFIISFNEQEVGSLYFEKAKRGFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVETCQKMIKAEYL
Ga0315909_100937132	3300031857	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKMTFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVEVCQKMIKTEYL
Ga0315909_102890471	3300031857	Freshwater	MKDFVYKMDSIEEGRIRFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0315904_100398417	3300031951	Freshwater	VDNFIFICSDSILINMTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIERLYEVVDYEITPKEIVEVCQKMIKNGGA
Ga0315904_106437901	3300031951	Freshwater	EEGRIRFIVSFNDQEVGSLYFEKAKKVFTNKPLSMDAWVCVDAKIEKLYEVSDYEIFPKDIVEVCQKMIRGEYL
Ga0315904_113143311	3300031951	Freshwater	MTDFIYKMDKMEDRIRFIISFNEQEVGSLYFEKAKRGFQRKPVSMDAWVCVDAKIEKLYEVSDYEIFPKEIVETCQKMI
Ga0315902_108359352	3300032093	Freshwater	MFIHMTDLLYTMDKVDDRLRFIISFNDQEVGSLYFEKAKRGFTNKPISMDAWLCVDAKIEKLYEVVDYEITPKQIVEVCQSMIKNGGV
Ga0334978_0483784_405_575	3300033979	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIER
Ga0334982_0288818_3_221	3300033981	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVE
Ga0334992_0073708_200_457	3300033992	Freshwater	MTDFIYKMDRMDDDIIRFIITFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0334994_0149282_454_708	3300033993	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPKQIVEVCQKMINGGE
Ga0334979_0029449_2514_2768	3300033996	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEITPKQIVEVCQKMINGGE
Ga0335001_0351655_567_794	3300034064	Freshwater	MDDDIIRFIITFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL
Ga0310127_027885_2691_2948	3300034072	Fracking Water	MTDFIYKMDRMDDDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYEISPKEIVEVCQKMIKAEYL
Ga0310130_0000954_17293_17505	3300034073	Fracking Water	MTDFIYKMDRMDDDIIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIEKLYEVSDYEISPKE
Ga0335020_0390504_3_197	3300034082	Freshwater	MTDFIYTMDKVDDRLRFIISFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYE
Ga0335030_0251914_3_212	3300034103	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEEEVGSLYFEKAKRGFTNKPLSMDAWVCVDAKIERLYEVSDYEIFPK
Ga0335051_0206110_143_397	3300034109	Freshwater	MTDFIYKMDRMEEGRIRFIVSLNEVEMGSLYFEKAKKGFHRKPVSMDAWVCVDAKIEKLYEVSEYDITPKQIVEVCQKMIKGGE
Ga0335052_0165546_458_715	3300034279	Freshwater	MTDFIYKMDRMDDDIIRFIITFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEIFPKEIVEVCQKMIKAEYL
Ga0335007_0445117_3_224	3300034283	Freshwater	DGRIRFIVSFNDQEVGSLYFEKAKKGFTNKPLSMDAWVCVDAKIERLYEVVDYEITPKDIVEVCQKMIRGEYL
Ga0335013_0238961_945_1178	3300034284	Freshwater	MDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIERLYEVSDYEITPKQIVEVCQKMINGGE
Ga0335013_0702951_1_210	3300034284	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKRTFQRKPVSMDAWVCVDAKIERLYEVSDYDITPK
Ga0335048_0081222_430_687	3300034356	Freshwater	MTDFIYKMDKIEEGRIRFIISFNEQEVGSLYFEKAKKTFQRKPVSMDAWVCVDAKIEKLYEVSDYEVVPKEIVEVCQKMIKAEYL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088899

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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