Metagenome / Metatranscriptome Family F088905

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088905
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	48 residues
Representative Sequence	MSEKDIDTTPVVEVKEEAKPKAEAKAAAPAENADATVDYWANAWANRGV
Number of Associated Samples	81
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	27.52 %
% of genes near scaffold ends (potentially truncated)	21.10 %
% of genes from short scaffolds (< 2000 bps)	72.48 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.220 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (22.018 % of family members)
Environment Ontology (ENVO)	Unclassified (48.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.046 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 0.00% Coil/Unstructured: 81.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04973	NMN_transporter	5.50
PF02467	Whib	2.75
PF00082	Peptidase_S8	2.75
PF01521	Fe-S_biosyn	1.83
PF13640	2OG-FeII_Oxy_3	1.83
PF00085	Thioredoxin	1.83
PF02675	AdoMet_dc	0.92
PF00166	Cpn10	0.92
PF05099	TerB	0.92
PF04820	Trp_halogenase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	5.50
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	1.83
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.92
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
All Organisms	root	All Organisms	35.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
Viruses	superkingdom	All Organisms → Viruses	30.28 %
cellular organisms	root	All Organisms → cellular organisms	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	3.67 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.83 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	3.67 %
Freshwater phage uvFW-CGR-AMD-COM-C440	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	1.83 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.22 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.50 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3.67 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.83 %
Freshwater phage uvFW-CGR-AMD-COM-C440	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	1.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199838949	Not Available	5035	Open in IMG/M
3300000736\|JGI12547J11936_1010779	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2365	Open in IMG/M
3300000736\|JGI12547J11936_1056001	Not Available	784	Open in IMG/M
3300000736\|JGI12547J11936_1069245	Not Available	674	Open in IMG/M
3300002279\|B570J29589_1024297	Not Available	565	Open in IMG/M
3300002835\|B570J40625_100083174	Not Available	4114	Open in IMG/M
3300003413\|JGI25922J50271_10059306	Not Available	846	Open in IMG/M
3300003430\|JGI25921J50272_10002974	Not Available	5527	Open in IMG/M
3300003493\|JGI25923J51411_1014017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1692	Open in IMG/M
3300003493\|JGI25923J51411_1079812	Not Available	559	Open in IMG/M
3300004112\|Ga0065166_10315057	Not Available	641	Open in IMG/M
3300004769\|Ga0007748_10229804	Not Available	799	Open in IMG/M
3300004769\|Ga0007748_11386719	Not Available	539	Open in IMG/M
3300005517\|Ga0070374_10255609	Not Available	895	Open in IMG/M
3300005517\|Ga0070374_10348841	Not Available	748	Open in IMG/M
3300005580\|Ga0049083_10037384	All Organisms → Viruses → Predicted Viral	1727	Open in IMG/M
3300005583\|Ga0049085_10109654	Not Available	948	Open in IMG/M
3300005584\|Ga0049082_10117021	Not Available	931	Open in IMG/M
3300005662\|Ga0078894_10362787	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1311	Open in IMG/M
3300005662\|Ga0078894_10475386	Not Available	1124	Open in IMG/M
3300005662\|Ga0078894_10597134	Not Available	983	Open in IMG/M
3300005662\|Ga0078894_10689402	Not Available	902	Open in IMG/M
3300005941\|Ga0070743_10164264	Not Available	735	Open in IMG/M
3300006484\|Ga0070744_10016881	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2168	Open in IMG/M
3300006484\|Ga0070744_10148587	Not Available	672	Open in IMG/M
3300007545\|Ga0102873_1086044	Not Available	954	Open in IMG/M
3300007546\|Ga0102874_1049370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1360	Open in IMG/M
3300007557\|Ga0102821_1198915	Not Available	511	Open in IMG/M
3300007559\|Ga0102828_1044676	Not Available	1020	Open in IMG/M
3300007561\|Ga0102914_1232943	Not Available	564	Open in IMG/M
3300007562\|Ga0102915_1239562	Not Available	587	Open in IMG/M
3300007585\|Ga0102916_1075044	Not Available	895	Open in IMG/M
3300007590\|Ga0102917_1070617	Not Available	1230	Open in IMG/M
3300007606\|Ga0102923_1125076	Not Available	806	Open in IMG/M
3300007617\|Ga0102897_1040446	Not Available	1485	Open in IMG/M
3300007617\|Ga0102897_1252276	Not Available	518	Open in IMG/M
3300007644\|Ga0102902_1038718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1430	Open in IMG/M
3300007706\|Ga0102899_1034589	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1193	Open in IMG/M
3300008052\|Ga0102893_1041021	Not Available	1411	Open in IMG/M
3300008107\|Ga0114340_1067493	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	1515	Open in IMG/M
3300008110\|Ga0114343_1063419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1381	Open in IMG/M
3300008261\|Ga0114336_1006646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	7714	Open in IMG/M
3300008999\|Ga0102816_1211397	Not Available	608	Open in IMG/M
3300009026\|Ga0102829_1074308	Not Available	1041	Open in IMG/M
3300009058\|Ga0102854_1039207	Not Available	1365	Open in IMG/M
3300009059\|Ga0102830_1023453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1930	Open in IMG/M
3300009159\|Ga0114978_10084245	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2122	Open in IMG/M
3300009183\|Ga0114974_10073639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2236	Open in IMG/M
3300009194\|Ga0114983_1043739	Not Available	1078	Open in IMG/M
3300009419\|Ga0114982_1002157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	8814	Open in IMG/M
3300009419\|Ga0114982_1188830	Not Available	637	Open in IMG/M
3300010374\|Ga0114986_1005128	All Organisms → Viruses → Predicted Viral	2865	Open in IMG/M
3300011268\|Ga0151620_1032480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1773	Open in IMG/M
3300012707\|Ga0157623_1225948	Not Available	872	Open in IMG/M
3300012734\|Ga0157615_1109424	Not Available	764	Open in IMG/M
3300019784\|Ga0181359_1004933	All Organisms → Viruses → Predicted Viral	4289	Open in IMG/M
3300019784\|Ga0181359_1232958	Not Available	571	Open in IMG/M
3300020141\|Ga0211732_1025529	Not Available	623	Open in IMG/M
3300020141\|Ga0211732_1076041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2951	Open in IMG/M
3300020151\|Ga0211736_10638784	Not Available	946	Open in IMG/M
3300020151\|Ga0211736_10743559	Not Available	584	Open in IMG/M
3300020151\|Ga0211736_10743675	Not Available	581	Open in IMG/M
3300020151\|Ga0211736_10884431	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1957	Open in IMG/M
3300020519\|Ga0208223_1008137	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300021519\|Ga0194048_10305179	Not Available	572	Open in IMG/M
3300021962\|Ga0222713_10009969	Not Available	8605	Open in IMG/M
3300021962\|Ga0222713_10465434	Not Available	763	Open in IMG/M
3300021963\|Ga0222712_10176463	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	1419	Open in IMG/M
3300023174\|Ga0214921_10015522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	8679	Open in IMG/M
3300023174\|Ga0214921_10016337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8361	Open in IMG/M
3300023174\|Ga0214921_10042049	Not Available	4198	Open in IMG/M
3300023174\|Ga0214921_10111791	Not Available	2001	Open in IMG/M
3300023174\|Ga0214921_10236897	Not Available	1088	Open in IMG/M
3300024343\|Ga0244777_10063475	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2369	Open in IMG/M
3300024343\|Ga0244777_10379011	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	884	Open in IMG/M
3300024346\|Ga0244775_10045098	All Organisms → Viruses → Predicted Viral	3864	Open in IMG/M
3300024346\|Ga0244775_10630117	Not Available	868	Open in IMG/M
3300024348\|Ga0244776_10032556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4185	Open in IMG/M
3300024348\|Ga0244776_10592686	Not Available	700	Open in IMG/M
3300024571\|Ga0256302_1111736	Not Available	643	Open in IMG/M
3300026405\|Ga0256296_1037335	Not Available	591	Open in IMG/M
3300027153\|Ga0255083_1048468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	847	Open in IMG/M
3300027320\|Ga0208923_1078718	Not Available	584	Open in IMG/M
3300027365\|Ga0209300_1047755	Not Available	739	Open in IMG/M
3300027387\|Ga0208311_1120642	Not Available	567	Open in IMG/M
3300027563\|Ga0209552_1032453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1531	Open in IMG/M
3300027563\|Ga0209552_1079581	Not Available	896	Open in IMG/M
3300027578\|Ga0255075_1004376	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3101	Open in IMG/M
3300027581\|Ga0209651_1078203	Not Available	952	Open in IMG/M
3300027621\|Ga0208951_1028667	All Organisms → Viruses → Predicted Viral	1711	Open in IMG/M
3300027627\|Ga0208942_1131287	Not Available	689	Open in IMG/M
3300027631\|Ga0208133_1047327	Not Available	1045	Open in IMG/M
3300027679\|Ga0209769_1207719	Not Available	605	Open in IMG/M
3300027710\|Ga0209599_10001317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	12131	Open in IMG/M
3300027710\|Ga0209599_10004297	Not Available	5223	Open in IMG/M
3300027720\|Ga0209617_10122738	Not Available	1035	Open in IMG/M
3300027720\|Ga0209617_10224873	Not Available	717	Open in IMG/M
3300027759\|Ga0209296_1019795	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3850	Open in IMG/M
3300027769\|Ga0209770_10027483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2486	Open in IMG/M
3300027769\|Ga0209770_10137107	Not Available	991	Open in IMG/M
3300028025\|Ga0247723_1000576	Not Available	24538	Open in IMG/M
3300029699\|Ga0255233_1071633	Not Available	685	Open in IMG/M
3300033978\|Ga0334977_0006267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6785	Open in IMG/M
3300033996\|Ga0334979_0438325	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	716	Open in IMG/M
3300034019\|Ga0334998_0591092	Not Available	606	Open in IMG/M
3300034022\|Ga0335005_0183940	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1306	Open in IMG/M
3300034082\|Ga0335020_0000037	Not Available	109168	Open in IMG/M
3300034102\|Ga0335029_0041793	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3404	Open in IMG/M
3300034121\|Ga0335058_0023332	Not Available	3679	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	92.66%
Terrestrial	Environmental → Terrestrial	7.34%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	62.39%
Marine	Environmental → Aquatic → Marine	30.28%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.34%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	32.11%
Lake	Environmental → Aquatic → Freshwater → Lake	24.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.34%
River	Environmental → Aquatic → Freshwater → River	4.59%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.77%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.85%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	22.02%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	8.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	22.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	6.42%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.50%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.50%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	4.59%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.59%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.75%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.75%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.92%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300002279	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004769	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010374	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012707	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012734	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES144 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024571	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026405	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027153	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027365	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT (SPAdes)	Environmental	Open in IMG/M
3300027387	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300029699	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200020568	2199352004	Freshwater	MSEKDIDPTPVVETVVVEEAKPKAETPAPASNADAVVDYWANAWANRGV
JGI12547J11936_10107798	3300000736	Freshwater And Sediment	MSENKDIDMVDGIPVAATVVAEEAKPKVETPTPAPASNADAVVDYWANAWANRGV*
JGI12547J11936_10560013	3300000736	Freshwater And Sediment	MSEKDIDTTPVVEVKEEAKPKAEAKAAAPAENADATVDYWANAWANRGV*
JGI12547J11936_10692455	3300000736	Freshwater And Sediment	MSEKDIDTTPVVEVKEEAKPVAEAKAAPAPVADATDYWANAWANRGV*
B570J29589_10242971	3300002279	Freshwater	MSDNTKDIDTTPVVEVKEEVKAEPKAEAKSAPVADATDYWANAWA
B570J40625_1000831746	3300002835	Freshwater	MSDNTKDIDTTPVVEVKEEVKAEPKAEAKSAPVADATDYWANAWANRGV*
JGI25922J50271_100593062	3300003413	Freshwater Lake	MSDNTKDIDTTPVVEVKEEVKPKAEAKAAPADADATVDYWANAWANRGV*
JGI25921J50272_1000297411	3300003430	Freshwater Lake	MSENKDIDMVDGLPVAETVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV*
JGI25923J51411_10140174	3300003493	Freshwater Lake	MSEKDIDMIDGVPVVEVKAEPKAEVKSAPVADATVDYWANAWANRGV*
JGI25923J51411_10798121	3300003493	Freshwater Lake	MSENKDIDTTPVVEVKEEPKAEVKSAPVADTTDYWANAWA
Ga0065166_103150571	3300004112	Freshwater Lake	MSDNTKDIDTTPAVEVKEEVKAEPKAEAKAEAKLAPVADTKDYWANAWANRGV*
Ga0007748_102298043	3300004769	Freshwater Lake	MSEKDIDTTPVVEVKEEVKVEPKAEAKSAPVADSTDYWANAWANRGV*
Ga0007748_113867191	3300004769	Freshwater Lake	MSEKDIDMIDGVPVAEVKAEPKAEPKAEVKSAPVADATVDYWANAWANRGV*
Ga0070374_102556092	3300005517	Freshwater Lake	MSENKDIDTTPVVEVKEEPKAEVKSAPVADTTDYWANAWANRGV*
Ga0070374_103488414	3300005517	Freshwater Lake	MSEKDIDMIDGVPVVEVKAEPKAEVKSAPVADATVDY
Ga0049083_100373846	3300005580	Freshwater Lentic	MSENKDIDTTPVVEVKEEPKAEVKSAPVADAATDYWANAWANRGV*
Ga0049085_101096543	3300005583	Freshwater Lentic	MSEKDIDTAPVVETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV*
Ga0049082_101170211	3300005584	Freshwater Lentic	MSEKDIDTTPVVEVKEEVKVEPKAEAKSAPVADSTDYWAN
Ga0078894_103627871	3300005662	Freshwater Lake	MSEKDIDPTPVVETVVVEEAKPKAETPAPASNADAVVDYWANAWANRGV*
Ga0078894_104753863	3300005662	Freshwater Lake	MSDKDIDTTPAVEVKEEVKPAAEAKATPAPSTDADSTVDYWANAWANRGV*
Ga0078894_105971342	3300005662	Freshwater Lake	MVDGLPVAEKVVAEEAKPKTETPAPASNADAVVDYWANAWANRGV*
Ga0078894_106894022	3300005662	Freshwater Lake	MSEKDIDTTPVVEAPVVEAVKPEPKAEAKTEAPVSADAVVDYWANAWANRGV*
Ga0070743_101642642	3300005941	Estuarine	MSEKDIDMVNGVPVAETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV*
Ga0070744_100168818	3300006484	Estuarine	MSENKDIDTTPVVEVKEEVKVEPKAETKSAPVADSTDYWANAWANRGV*
Ga0070744_101485872	3300006484	Estuarine	MSEKDIDMIDGLPVAETVVAEEAKPKAEAKAEAPAVNADTTVDYWANAWANRGV*
Ga0102873_10860441	3300007545	Estuarine	MSEKDIDTTPVVETVVAEEAKPKAEAKAEAPAANADATV
Ga0102874_10493705	3300007546	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANA
Ga0102821_11989151	3300007557	Estuarine	MSEKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANA
Ga0102828_10446764	3300007559	Estuarine	MSEKDIDTTPVVETVVAEEAKPKAEAKAEAPAVNADTTVDYWANAWANRGV*
Ga0102914_12329431	3300007561	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV*
Ga0102915_12395621	3300007562	Estuarine	MSEKDIDPTPVVETVVVEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV*
Ga0102916_10750444	3300007585	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPKAETPAPVANATTDYWANAWANRGV*
Ga0102917_10706174	3300007590	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANAWANRGV*
Ga0102923_11250762	3300007606	Estuarine	MSEKDIDMVNGVPVAETVVAEEAKPKTETAAPASNADAVVDYWANAWANRGV*
Ga0102897_10404465	3300007617	Estuarine	MSENKDIDTTPVVEVKEEPKAEVKSAPVADAATDY
Ga0102897_12522763	3300007617	Estuarine	VVEVKEEPKAEVKSAPVADAATDYWANAWANRGV*
Ga0102902_10387185	3300007644	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWVNAWANRGV*
Ga0102899_10345892	3300007706	Estuarine	MSEKDIDMVDGLPVAEKVVAEEAKPVAEAKAAPAPVADATDYWANAWANRGV*
Ga0102893_10410215	3300008052	Estuarine	MSEKDIDMVDGLPVAEKVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV*
Ga0114340_10674932	3300008107	Freshwater, Plankton	MSENTEKDIVETPAVEAKPEIKVEPKVESAPAADSVVDYWANAWANRGV*
Ga0114343_10634196	3300008110	Freshwater, Plankton	MSEKDIDTTPVVEVKEEVKVEPKAEDKSAPVADSTDYWANAWANRGV*
Ga0114336_100664619	3300008261	Freshwater, Plankton	MSDNTEKDIVATPVVEAKPEIKEEPKVEVKAEAAPAADSVVDYWANAWANRGV*
Ga0102816_12113972	3300008999	Estuarine	MSENKDIDTTPVVEVKEEPKAEAKSAPVADAATDYWANAWANRGV*
Ga0102829_10743082	3300009026	Estuarine	MSEKDIDTTPVVETVVAEEAKPKAEAKAEAPAANADATVDYWANAWANRGV*
Ga0102854_10392075	3300009058	Estuarine	MSENKDIDTTPVVEEVVAEEAKPKAEAKAAAPVADATDYWANAWANRGV*
Ga0102830_10234531	3300009059	Estuarine	NKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANAWANRGV*
Ga0114978_100842455	3300009159	Freshwater Lake	MSEKDIDTTPVVEVKEEPKAEVKSAPVADSTDYWANAWANRGV*
Ga0114974_100736391	3300009183	Freshwater Lake	MLEKDIDTTPVVEVKEEPKAEVKSAPVADSTDYWANAWANRGV*
Ga0114983_10437393	3300009194	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKPKAEDKAAPADADATVDYWANAWANRGV*
Ga0114982_100215719	3300009419	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKAEPKAEAKSAPVADSTDYWANAWANRGV*
Ga0114982_11888302	3300009419	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKPKAEAKATPADADATVDYWANAWANRGV*
Ga0114986_10051283	3300010374	Deep Subsurface	MSDNTKYIDTTPVVEVKEEVKPKAEDKAAPADADATVDYWANAWANRGV*
Ga0151620_10324805	3300011268	Freshwater	MSENKDIDTTPVVEVKEEPKAEVKSAPVADATTDYWANAWANRGV*
Ga0157623_12259483	3300012707	Freshwater	MSENKDIDATPVVETVVAEEVKPVAEVKADPAPAADATDYWANAWANRGV*
Ga0157615_11094243	3300012734	Freshwater	MSENKDIDTTPVVETVVVEEVKPVAEAKDAPAPAVDATDYWANAWANRGV*
Ga0181359_10049333	3300019784	Freshwater Lake	MSEKDIDTTPVVEVKEEVKVEPKAEAKSAPVADSTDYWANAWANRGV
Ga0181359_12329583	3300019784	Freshwater Lake	MSENKDIDTTPVVEVKEEPKAEVKSAPVADTTDYWANAWANRGV
Ga0211732_10255291	3300020141	Freshwater	VIMSEKDIDTTPVVEAVVAEEVKPEPKAEAKTEAPAGADSVVDYWANAWANRGV
Ga0211732_10760412	3300020141	Freshwater	MSDNTNDIDTTPVDAAPVVEVKEEPKAEVKSAPVADATTDYWATAWANRGV
Ga0211736_106387842	3300020151	Freshwater	MSDNKDIDTTPVVEVKAEVKVEPKAEAKSAPVADSTDYWANAWANRGV
Ga0211736_107435592	3300020151	Freshwater	MSEKDIDTTPVVEAVVAEEVKPEPKAEAKTEAPAGADSVVDYWANAWANRGV
Ga0211736_107436752	3300020151	Freshwater	MSEKDIDTTPVVETVVAEEAKPKAETPAPAPASNADAVVDYWANAWANRGV
Ga0211736_108844311	3300020151	Freshwater	TNDIDTTPVDAAPVVEVKEEPKAEVKSAPVADATTDYWATAWANRGV
Ga0208223_10081372	3300020519	Freshwater	MSDNTKDIDTTPVVEVKEEVKPKAEAKAAPADADATVDYWANAWANRGV
Ga0194048_103051792	3300021519	Anoxic Zone Freshwater	MSEKDIDTTPVVETVVAEEAKPKAETSAPAANADATVDYWANAWANRGA
Ga0222713_100099698	3300021962	Estuarine Water	MSENTEKDIETTPVVDTKPEVKVEPKAEVKTEAAPAADSVVDYWANAWANRGV
Ga0222713_104654343	3300021962	Estuarine Water	MSEKDIDTTPVVETVVAEEAKPKAEAKAEAPASNADATVDYWANAWANRGV
Ga0222712_101764634	3300021963	Estuarine Water	MSENKDIDMVDGLPVAETVVAEEAKPKAETPAPAPVANAVTDYWANAWANRGV
Ga0214921_100155226	3300023174	Freshwater	MSEKDIDTTPVVETLVAEEAKPKAEAKAAPADADATVDYWANAWANRGV
Ga0214921_100163375	3300023174	Freshwater	MSEKDIDTTPVVETIVAEEAKPKAEAKAEAPAANADATVDYWANAWANRGV
Ga0214921_1004204916	3300023174	Freshwater	MSDNTKDIDTTPAVEVKEEIKAEPKAEAKTESAPSADSTVDYWANAWANRGV
Ga0214921_101117913	3300023174	Freshwater	MSEKDIDKTPVVEVKEEVKVEPKAEAKSAPVADSTDYWANAWANRGV
Ga0214921_102368973	3300023174	Freshwater	MSDNTKDIDTAPAVEVKEEIKAEPKVEAKTESAPSADSTVDYWANAWANRGV
Ga0244777_100634754	3300024343	Estuarine	MSEKDIDMVNGVPVAETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV
Ga0244777_103790111	3300024343	Estuarine	VIMSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANAWANRGV
Ga0244775_100450985	3300024346	Estuarine	MSENKDIDTTPVVEVKEEVKVEPKAETKSAPVADSTDYWANAWANRGV
Ga0244775_106301171	3300024346	Estuarine	MSENKDIDTTPVVEEVVAEEVKPKAEAKAAAPVADATDYWANAWANRGV
Ga0244776_1003255614	3300024348	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANAWANRGV
Ga0244776_105926861	3300024348	Estuarine	SENKDIDTTPVVEVKEEPKAEVKSAPVADAATDYWANAWANRGV
Ga0256302_11117362	3300024571	Freshwater	MSENKDIDTTPVVEVKEEVKVEPKAEAKSAPVADSTDYWANAWANRGV
Ga0256296_10373352	3300026405	Freshwater	MSEKDIDMVDGLPVAETVVAEEAKPKVETPAPAPASNADAVVDYWANAWANRGV
Ga0255083_10484684	3300027153	Freshwater	LPVAEKVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV
Ga0208923_10787181	3300027320	Estuarine	TPIVETVVAEEAKPKAEAKAEAPAANADATVDYWANAWANRGV
Ga0209300_10477553	3300027365	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKPKAEDKAAPADADATVDYWANAWANRGV
Ga0208311_11206422	3300027387	Estuarine	MSENKDIDMVNGVPVAETVVAEEAKPVAEAKAAPAPVADATDYWANAW
Ga0209552_10324534	3300027563	Freshwater Lake	MSEKDIDMIDGVPVVEVKAEPKAEVKSAPVADATVDYWANAWANRGV
Ga0209552_10795813	3300027563	Freshwater Lake	MSEKDIDRIDGVPVAETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV
Ga0255075_100437610	3300027578	Freshwater	KDIDMVDGLPVAEKVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV
Ga0209651_10782032	3300027581	Freshwater Lake	MSENKDIDMVDGVPVAETVVAEEAKPKAETPAPVANAATDYWANAWANRGV
Ga0208951_10286673	3300027621	Freshwater Lentic	MSENKDIDTTPVVEVKEEPKAEVKSAPVADAATDYWANAWANRGV
Ga0208942_11312873	3300027627	Freshwater Lentic	MSEKDIDTAPVVETVVAEEAKPKAEAKAEAPAVNADATVDYWANAWANRGV
Ga0208133_10473273	3300027631	Estuarine	MSEKDIDMIDGLPVAETVVAEEAKPKAEAKAEAPAVNADTTVDYWANAWANRGV
Ga0209769_12077193	3300027679	Freshwater Lake	TTPVVEVKEEPKAEVKSAPVADTTDYWANAWANRGV
Ga0209599_1000131713	3300027710	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKAEPKAEAKSAPVADSTDYWANAWANRGV
Ga0209599_1000429713	3300027710	Deep Subsurface	MSDNTKDIDTTPVVEVKEEVKPKAEAKATPADADATVDYWANAWANRGV
Ga0209617_101227383	3300027720	Freshwater And Sediment	MSEKDIDTTPVVEVKEEAKPKAEAKAAAPAENADATVDYWANAWANRGV
Ga0209617_102248733	3300027720	Freshwater And Sediment	MSEKDIDTTPVVEVKEEAKPVAEAKAAPAPVADATDYWANAWANRGV
Ga0209296_10197959	3300027759	Freshwater Lake	MLEKDIDTTPVVEVKEEPKAEVKSAPVADSTDYWANAWANRGV
Ga0209770_100274831	3300027769	Freshwater Lake	VIMSDNKDIDMVDGLPVAETVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV
Ga0209770_101371075	3300027769	Freshwater Lake	MSENKDIDMVDGLPVAETVVAEEAKPKAETPAPASNADAVVDYWA
Ga0247723_100057649	3300028025	Deep Subsurface Sediment	MSDNTKDIDTTPVVEVKEEVKPKAEAKAAPADADATVDFWANAWANRGV
Ga0255233_10716333	3300029699	Freshwater	MVDGLPVAEKVVAEEAKPKAETPAPASNADAVVDYWANAWANRGV
Ga0334977_0006267_808_963	3300033978	Freshwater	MGLFDKEEVTAPSMEAAIAEAVKPVAEAKAAPAPVADATDYWANAWANRGV
Ga0334979_0438325_587_715	3300033996	Freshwater	IDTTPVVEVKEEVKPKAEAKAAPADADATVDYWANAWANRGV
Ga0334998_0591092_140_289	3300034019	Freshwater	MSDNTKDIDTTPVVEVKEEVKAEPKAEAKSAPVADATDYWANAWANRGV
Ga0335005_0183940_760_921	3300034022	Freshwater	MSDNTKDIDTTPVVEAAVVEEVKPKAEAKAEAPAADADATVDYWANAWANRGV
Ga0335020_0000037_97688_97840	3300034082	Freshwater	MSENKDIDATPVVETVVAEEVKPVAEVKADPAPAADATDYWANAWANRGV
Ga0335029_0041793_2880_3032	3300034102	Freshwater	MSENKDIDTTPVVETVVAEEVKPVAEAKDAPAPAVDATDYWANAWANRGV
Ga0335058_0023332_3_125	3300034121	Freshwater	MSDNTKDIDTTPVVEVKEEVKPKAEAKAAPADADATVDTGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088905

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences