Metagenome / Metatranscriptome Family F088942

Basic Information
Family ID	F088942
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	54 residues
Representative Sequence	MVEWFRRDNTEGFDEETLKVMNVEMQKVFDSLSEEEKENKSYIDYLKEQILSKY
Number of Associated Samples	51
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.16 %
% of genes near scaffold ends (potentially truncated)	12.84 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Most Common Taxonomy
Group	Bacteria (43.119 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (77.064 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (38.532 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.68% β-sheet: 0.00% Coil/Unstructured: 57.32%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.153.1.4: Proteasome subunits	d3mi02_	3mi0	0.71107
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1j8mf1	1j8m	0.70221
c.108.1.6: beta-Phosphoglucomutase-like	d2gfha1	2gfh	0.69186
a.24.13.1: Domain of the SRP/SRP receptor G-proteins	d1ls1a1	1ls1	0.68221
a.138.1.3: Di-heme elbow motif	d1h21a_	1h21	0.68215

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03175	DNA_pol_B_2	0.92
PF00145	DNA_methylase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	45.87 %
Unclassified	root	N/A	39.45 %
Viruses	superkingdom	All Organisms → Viruses	14.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.12 %
Unclassified	root	N/A	39.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
Atribacterota	phylum	All Organisms → cellular organisms → Bacteria → Atribacterota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	38.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.75 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.83 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
unclassified Atribacterota	no rank	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota	0.92 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	38.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	38.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.75 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1.83 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	36.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Rhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax	2.75 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	1.83 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	1.83 %
Bacteroidetes bacterium ADurb.Bin141	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin141	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	36.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Rhodoferax fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	2.75 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	1.83 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1.83 %
Bacteroidetes bacterium ADurb.Bin141	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin141	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	36.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Rhodoferax fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	2.75 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1.83 %
Methanosarcina siciliae	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina siciliae	1.83 %
Bacteroidetes bacterium ADurb.Bin141	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin141	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	36.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Rhodoferax fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	2.75 %
Methanosarcina siciliae C2J	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina siciliae → Methanosarcina siciliae C2J	1.83 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1.83 %
Bacteroidetes bacterium ADurb.Bin141	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin141	0.92 %
Candidatus Atribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111018\|Meso_c543113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	553	Open in IMG/M
3300001975\|Draft_10548256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	525	Open in IMG/M
3300002163\|JGI24707J26582_10115538	Not Available	782	Open in IMG/M
3300002163\|JGI24707J26582_10121278	Not Available	754	Open in IMG/M
3300002166\|JGI24713J26584_10027694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1746	Open in IMG/M
3300002167\|JGI24714J26587_10048125	Not Available	1133	Open in IMG/M
3300002168\|JGI24712J26585_10032667	All Organisms → Viruses → Predicted Viral	2516	Open in IMG/M
3300002168\|JGI24712J26585_10139958	Not Available	738	Open in IMG/M
3300002170\|JGI24711J26586_10080167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	941	Open in IMG/M
3300002173\|JGI24709J26583_10043029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1899	Open in IMG/M
3300002173\|JGI24709J26583_10085403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	1073	Open in IMG/M
3300002173\|JGI24709J26583_10085468	Not Available	1073	Open in IMG/M
3300002173\|JGI24709J26583_10107102	Not Available	887	Open in IMG/M
3300002173\|JGI24709J26583_10129961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	757	Open in IMG/M
3300002173\|JGI24709J26583_10162527	Not Available	634	Open in IMG/M
3300002173\|JGI24709J26583_10209032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	522	Open in IMG/M
3300002378\|JGI24502J29692_10115178	Not Available	626	Open in IMG/M
3300002898\|draft_10108364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1927	Open in IMG/M
3300002898\|draft_10157562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1408	Open in IMG/M
3300002898\|draft_10244958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	970	Open in IMG/M
3300002898\|draft_10395025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	651	Open in IMG/M
3300002898\|draft_10517063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	522	Open in IMG/M
3300002898\|draft_10518828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	520	Open in IMG/M
3300006389\|Ga0079064_1424487	Not Available	655	Open in IMG/M
3300006395\|Ga0079066_1451158	Not Available	581	Open in IMG/M
3300006598\|Ga0079098_1002763	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina siciliae → Methanosarcina siciliae C2J	3132	Open in IMG/M
3300006801\|Ga0079223_10627445	Not Available	678	Open in IMG/M
3300009095\|Ga0079224_101459418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	971	Open in IMG/M
3300009542\|Ga0116234_1049373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1297	Open in IMG/M
3300009542\|Ga0116234_1071660	Not Available	1105	Open in IMG/M
3300009588\|Ga0116232_1181569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1403	Open in IMG/M
3300009647\|Ga0123326_1275056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	503	Open in IMG/M
3300009657\|Ga0116179_1104243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1048	Open in IMG/M
3300009657\|Ga0116179_1262462	Not Available	567	Open in IMG/M
3300009657\|Ga0116179_1300231	Not Available	522	Open in IMG/M
3300009663\|Ga0116181_1079172	Not Available	1372	Open in IMG/M
3300009666\|Ga0116182_1264861	Not Available	724	Open in IMG/M
3300009668\|Ga0116180_1136949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1001	Open in IMG/M
3300009669\|Ga0116148_1113432	All Organisms → Viruses → Predicted Viral	1299	Open in IMG/M
3300009671\|Ga0123334_1413933	Not Available	564	Open in IMG/M
3300009680\|Ga0123335_1349960	Not Available	695	Open in IMG/M
3300009680\|Ga0123335_1491929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	550	Open in IMG/M
3300009685\|Ga0116142_10610016	Not Available	513	Open in IMG/M
3300009690\|Ga0116143_10153594	All Organisms → Viruses → Predicted Viral	1272	Open in IMG/M
3300010310\|Ga0116235_1421036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	827	Open in IMG/M
3300010340\|Ga0116250_10185595	Not Available	1287	Open in IMG/M
3300010340\|Ga0116250_10257723	All Organisms → Viruses → Predicted Viral	1046	Open in IMG/M
3300010340\|Ga0116250_10378580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	823	Open in IMG/M
3300010346\|Ga0116239_10572152	Not Available	738	Open in IMG/M
3300010356\|Ga0116237_10970953	Not Available	715	Open in IMG/M
3300010357\|Ga0116249_11380450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	629	Open in IMG/M
3300014203\|Ga0172378_10295016	Not Available	1250	Open in IMG/M
3300014203\|Ga0172378_10421933	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300014203\|Ga0172378_10440492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	979	Open in IMG/M
3300014203\|Ga0172378_10566457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	840	Open in IMG/M
3300014203\|Ga0172378_10987815	Not Available	602	Open in IMG/M
3300014204\|Ga0172381_10415802	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300014204\|Ga0172381_10544364	Not Available	893	Open in IMG/M
3300014204\|Ga0172381_10589753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	851	Open in IMG/M
3300014204\|Ga0172381_10795017	Not Available	710	Open in IMG/M
3300014204\|Ga0172381_10965808	Not Available	631	Open in IMG/M
3300014206\|Ga0172377_10075443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	3121	Open in IMG/M
3300014206\|Ga0172377_10293398	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
3300014206\|Ga0172377_10618925	Not Available	868	Open in IMG/M
3300014206\|Ga0172377_10631643	All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	857	Open in IMG/M
3300014206\|Ga0172377_10872940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	701	Open in IMG/M
3300014206\|Ga0172377_11232644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	568	Open in IMG/M
3300014206\|Ga0172377_11431865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	519	Open in IMG/M
3300014206\|Ga0172377_11511510	Not Available	502	Open in IMG/M
3300014206\|Ga0172377_11522450	Not Available	500	Open in IMG/M
3300015214\|Ga0172382_10148666	All Organisms → Viruses → Predicted Viral	2025	Open in IMG/M
3300015214\|Ga0172382_10162604	All Organisms → Viruses → Predicted Viral	1907	Open in IMG/M
3300015214\|Ga0172382_10515431	Not Available	872	Open in IMG/M
3300015214\|Ga0172382_10779578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	657	Open in IMG/M
3300015214\|Ga0172382_10923697	Not Available	586	Open in IMG/M
3300019224\|Ga0180029_1188868	Not Available	995	Open in IMG/M
3300019239\|Ga0180030_1004863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	664	Open in IMG/M
3300025618\|Ga0208693_1016249	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin141	3367	Open in IMG/M
3300025618\|Ga0208693_1133315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax fermentans	652	Open in IMG/M
3300025657\|Ga0208823_1079463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1079	Open in IMG/M
3300025683\|Ga0208564_1143253	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → Methanosarcina siciliae → Methanosarcina siciliae C2J	714	Open in IMG/M
3300026311\|Ga0209723_1154622	Not Available	879	Open in IMG/M
3300027510\|Ga0209537_1055634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1175	Open in IMG/M
3300027711\|Ga0209075_1004503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	11143	Open in IMG/M
3300028602\|Ga0265294_10074374	All Organisms → Viruses → Predicted Viral	2854	Open in IMG/M
3300028602\|Ga0265294_10100641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	2319	Open in IMG/M
3300028602\|Ga0265294_10111712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	2157	Open in IMG/M
3300028602\|Ga0265294_10118451	All Organisms → Viruses → Predicted Viral	2071	Open in IMG/M
3300028602\|Ga0265294_10142736	Not Available	1820	Open in IMG/M
3300028602\|Ga0265294_10174095	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1585	Open in IMG/M
3300028602\|Ga0265294_10194173	All Organisms → Viruses → Predicted Viral	1467	Open in IMG/M
3300028602\|Ga0265294_10212565	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300028602\|Ga0265294_10351589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	954	Open in IMG/M
3300028602\|Ga0265294_10351612	Not Available	954	Open in IMG/M
3300028602\|Ga0265294_10428413	Not Available	827	Open in IMG/M
3300028602\|Ga0265294_10506879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	732	Open in IMG/M
3300028602\|Ga0265294_10533379	Not Available	705	Open in IMG/M
3300028602\|Ga0265294_10576614	Not Available	666	Open in IMG/M
3300028602\|Ga0265294_10582828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	661	Open in IMG/M
3300028602\|Ga0265294_10731010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	560	Open in IMG/M
3300028602\|Ga0265294_10740769	Not Available	555	Open in IMG/M
3300028603\|Ga0265293_10638931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	583	Open in IMG/M
3300028624\|Ga0302246_1016765	All Organisms → Viruses → Predicted Viral	2385	Open in IMG/M
3300028631\|Ga0302241_1023350	All Organisms → Viruses → Predicted Viral	1903	Open in IMG/M
3300029667\|Ga0307354_111724	Not Available	1022	Open in IMG/M
3300029822\|Ga0134854_1017197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2420	Open in IMG/M
3300029825\|Ga0134835_1025089	All Organisms → Viruses → Predicted Viral	2201	Open in IMG/M
3300029825\|Ga0134835_1074307	Not Available	794	Open in IMG/M
3300029825\|Ga0134835_1087468	Not Available	682	Open in IMG/M

Habitat	Taxonomy	Distribution
Engineered	Engineered	77.06%
Environmental	Environmental	22.94%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	22.94%
Aquatic	Environmental → Aquatic	20.18%
Solid Waste	Engineered → Solid Waste	20.18%
Biotransformation	Engineered → Biotransformation	14.68%
Bioreactor	Engineered → Bioreactor	13.76%
Unclassified	Engineered → Unclassified	5.50%
Terrestrial	Environmental → Terrestrial	2.75%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	22.94%
Freshwater	Environmental → Aquatic → Freshwater	20.18%
Landfill	Engineered → Solid Waste → Landfill	19.27%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	14.68%
Anaerobic	Engineered → Bioreactor → Anaerobic	10.09%
Unclassified	Engineered → Unclassified → Unclassified	5.50%
Unclassified	Engineered → Bioreactor → Unclassified	3.67%
Soil	Environmental → Terrestrial → Soil	2.75%
Grass	Engineered → Solid Waste → Grass	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	22.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	20.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	19.27%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	14.68%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	10.09%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	5.50%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.75%
Composting	Engineered → Solid Waste → Grass → Composting	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	22.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	20.18%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	19.27%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	14.68%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	10.09%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	5.50%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.75%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.92%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	21.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	20.18%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	18.35%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	14.68%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	10.09%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	5.50%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	2.75%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	1.83%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	0.92%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	0.92%

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300006389	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006395	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006598	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_H2B_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009542	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009588	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300010310	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B SIP RNA (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300019224	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300019239	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-A RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025683	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300027711	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011 (SPAdes)	Environmental	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028624	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Trp	Engineered	Open in IMG/M
3300028631	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Arg	Engineered	Open in IMG/M
3300029667	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Trp1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_5431131	2209111018	Solid Waste From Bioreactor	MKWFRKDNTEGFDEKTLAVMNEEMQKQYDTLSHEERRNKSYIDYLKEQILSSY
Draft_105482561	3300001975	Biogas Fermenter	MEWFRRDNTEGFDEKTLAVMNEEMQKQYDNLSDEERRNKSYIDYLKEQILSSH*
JGI24707J26582_101155382	3300002163	Biogas Fermentantion	MTEWFRRDNTEGFNDDTLKVMNEKMDKIFANLDEEERENKSYLDYLMEEILSQY*
JGI24707J26582_101212782	3300002163	Biogas Fermentantion	MEWFRRDNTEGFDEKTLAVMNEEMQKQYDSLSDEEKRNKSYIDHLMEKILSKY*
JGI24713J26584_100276944	3300002166	Biogas Fermentantion	MVEWFRRDNTEGFDEETLKVMNVEMQKVFDSLSEEEKENKSYIDYLKEQILSKY*
JGI24714J26587_100481252	3300002167	Biogas Fermentantion	MVEWFRRDNTEGYSDETLKEMNEKMDKIFANLDAEERENKSFIDYLK
JGI24712J26585_100326676	3300002168	Biogas Fermentantion	MEWFREDNTEGYSEEILKVMNEKMDKIFANLDEEERENKSYIDYLKEKILTSH*
JGI24712J26585_101399584	3300002168	Biogas Fermentantion	MTEWFRRDNTEGFNDDTLKVMNEKMDKIFANLDEEERENKSYLDY
JGI24711J26586_100801673	3300002170	Biogas Fermentantion	MEWFRKDNTEGFDEKTLEEMNVEMQKLYDSLSDEEKENGSYIDYLKEQILLKY*
JGI24709J26583_100430292	3300002173	Biogas Fermentantion	MKWFRKDNTEGFDEKTLAVMNEEMQKQYDTLSHEERRNKSYIDYLKEQILXSY*
JGI24709J26583_100854031	3300002173	Biogas Fermentantion	MEWFRRDNTEGFDEETLKEMNVEMQKLFDSLSDEEKENKSLIDHLKEKIFSSY*
JGI24709J26583_100854682	3300002173	Biogas Fermentantion	MAKWFRRDNTEGYSDETLKEMNVEMQKIFDSLSEEEQENKSYIDYLKEQILSKY*
JGI24709J26583_101071022	3300002173	Biogas Fermentantion	MTEWFRKDNTEGFDEKTLAVMNEEMQKQYDNLSDEERRNESYIDYLKEQILSSY*
JGI24709J26583_101299612	3300002173	Biogas Fermentantion	MVSKDNTEGFSEEILAVMNEEMQKQYDSLSEEEQENKSYIDYLKEQILSKY*
JGI24709J26583_101625271	3300002173	Biogas Fermentantion	MEWFRKDNTEGFDEKILAVMNEEMQKQYDSLSDEEKENKSYIDYLKEQ
JGI24709J26583_102090321	3300002173	Biogas Fermentantion	MVKWFRKDNTKGFDENTLKVMNEEMQKLFDSLSEEEKENKSLIDYLKEEILFQH*
JGI24502J29692_101151782	3300002378	Biogas Fermentantion	MEWFRRDNTEGFDEKTLAVMNEEMQKQYDSLSDEEKRNKSYIDHLMEKIFSKY*
draft_101083643	3300002898	Biogas Fermenter	MKWFRRDNTEGYSDETLKEMNEKMDKIFANLDEEERENKSYLDYLKEQILSKY*
draft_101575621	3300002898	Biogas Fermenter	MAKWFRKDNTEGFDEKTLKEMNVEMQKVFDSLSDEEKRNKSYIDHLKEQILSKY*
draft_102449582	3300002898	Biogas Fermenter	MEWFRRDNTEGYSEEILKVMNEKMDKIFANLDEEERENKSYIDYLKEQILSKY*
draft_103950252	3300002898	Biogas Fermenter	MVKWFSRDNTEGYSEEILKVMNEEMQKVFDSLSEEEKENKSYIDYLKEQILSKY*
draft_105170631	3300002898	Biogas Fermenter	MKWFRKDNTEGYSEKILEKMNVEMQKVFDSLSEEEKENKSYIDYLKEQILSKY*
draft_105188282	3300002898	Biogas Fermenter	MVKWFRKDNTEGYSDETLKEMNEEMQKQYDSLSDEEKNNKSYIDYLKEQILSKY*
Ga0079064_14244871	3300006389	Anaerobic Digestor Sludge	FSYQVKLIGGSVEMKWFRRDNTEGYSDETLKVMNREMDAVYSNLDEEEKNNESYIDHLMEKILSSH*
Ga0079066_14511582	3300006395	Anaerobic Digestor Sludge	MKWFRRDNTEGYSDETLKVMNEEMQKVFDSLSDEEKNNESYIDHLMEKILSSH*
Ga0079098_10027638	3300006598	Anaerobic Digestor Sludge	MTEWFRKDNTEGYSDETLKVMNEEMQKLYNSLSDEEKGNESYIDYLKEQILSSH*
Ga0079223_106274452	3300006801	Agricultural Soil	MAEWFRHDNTEGFDEKTLAVMNEEMQKQYDNLSDEERRNESYIDYLKEQILSSH*
Ga0079224_1014594182	3300009095	Agricultural Soil	MVEWFRNDNTGGFDEKTLAVMNEEMQKQYDNLSDEERRNKSYIDYLKEQILSSH*
Ga0116234_10493734	3300009542	Anaerobic Biogas Reactor	MWFRKDNTEGFDEKTLKVMNEEMQKLYNSLSEEEKGNESYIDYLKEQILSSH*
Ga0116234_10716603	3300009542	Anaerobic Biogas Reactor	MEWFRKDNTEGFDENTLKVMNEEMQKQYDSLSDEEKNNESYIDHLMEEILSKY*
Ga0116232_11815693	3300009588	Anaerobic Biogas Reactor	MKWFRRDNTEGFDDDTLKEMNVEMQKVFDALSDEEKGNESYIDYLKEQILSSH*
Ga0123326_12750562	3300009647	Anaerobic Biogas Reactor	MKWFRRDNTEGYSDETLKVMNEEMQKVFDSLSDEEKGNESYIDYLKEQILSSH*
Ga0116179_11042432	3300009657	Anaerobic Digestor Sludge	MTEWFRRDNTEGYDEETLKKMNREMDKVYSNLDEEERENKSYIDYLKEKILSSH*
Ga0116179_12624621	3300009657	Anaerobic Digestor Sludge	MTEWFRRDNTEGYDEETLKKMNREMDKIFANLDERERENKSYLDYLMEEILFQH*
Ga0116179_13002311	3300009657	Anaerobic Digestor Sludge	MEWFRKDNTEGYSDEILKEMNEKMDKIYSNLDERERENKSYIDYLKEEILFQHS*
Ga0116181_10791722	3300009663	Anaerobic Digestor Sludge	LIGGSEKMEWFSRDNTEEFDEKTLAVMNEEMQKQYDNLSDEERRNKSYIDYLKEQILSSH
Ga0116182_12648612	3300009666	Anaerobic Digestor Sludge	MEWFRRDNTEGFNDDTLKEMNVEMQKVFDALSDEEKGNESYIDHLMEKILSSH*
Ga0116180_11369491	3300009668	Anaerobic Digestor Sludge	MVEWFRRDNTEGYSDETLKEMNEKMDKIFANLDERERENKSYLDYLMEEILFQHS*
Ga0116148_11134322	3300009669	Anaerobic Digestor Sludge	MVEWFRRDNTEGFDVKTLKVMNEEMQKLYNSLSEEEKGNESYIDHLMEKILSKY*
Ga0123334_14139333	3300009671	Anaerobic Biogas Reactor	GSVEMVEWFRRDNTEGFDENTLKVMNEEMQKQYDSLSDEEKNNESYIDHLMEEILSKY*
Ga0123335_13499602	3300009680	Anaerobic Biogas Reactor	MEWFRRDNTEGYSDETLKVMNEEMQKLYNSLSEEEKGNESYIDYLKEQILSSH*
Ga0123335_14919291	3300009680	Anaerobic Biogas Reactor	MEWFRQDNTEGFDEKTLKEMNEEMDKIFENLSEEEKNNESYLDYLKEQILAKY*
Ga0116142_106100162	3300009685	Anaerobic Digestor Sludge	MEWFRKDNTEGYSDETLKVMDEEMQKVFDSLSDEEKGNESYIDYLKEQILSSH*
Ga0116143_101535942	3300009690	Anaerobic Digestor Sludge	MEWFRRDNTEGYSDETLKVMNEEMQKVFDSLSDEEKGNESYIDHLMEKILSKY*
Ga0116235_14210363	3300010310	Anaerobic Biogas Reactor	MEWFRRDNTDGYDENTLKEMNDEMKKLYDSLSDEEKGNESYIDYLKEQILSLH*
Ga0116250_101855952	3300010340	Anaerobic Digestor Sludge	MTEWFRRDNTEGYSDEILKEMNEKMDKIFANLDERERENKSYIDYLKEEILFQHS*
Ga0116250_102577231	3300010340	Anaerobic Digestor Sludge	MEWFRRDNTEGYSDEILKEMNEKMDKIFANLDERERENKSYLDYLMEEILFQHS*
Ga0116250_103785801	3300010340	Anaerobic Digestor Sludge	EWFRRDNTEGYDEETLKKMNREMDKIYSNLDEEERENKSYIDYLKEKILSSH*
Ga0116239_105721523	3300010346	Anaerobic Digestor Sludge	MEWFRRDNTEGYSDETLKVMNEEMQKVFDSLSDEEKNNESYIDHLMEKILSSH*
Ga0116237_109709532	3300010356	Anaerobic Digestor Sludge	MKWFRKDNTEGYSDETLAVMNEKMRKQYDSLSEEEKNNESYIDHLMEKILSSH*
Ga0116249_113804501	3300010357	Anaerobic Digestor Sludge	MKWFRRDNTEGFDENTLKVMNEEMQKVFDSLSDEEKNNESYIDHLMEKIL
Ga0172378_102950164	3300014203	Groundwater	MQWFRKDNTEGFDEKTLKEMNIEMKKVYDSLSEEERKNESYIDHLKEQILSKY*
Ga0172378_104219331	3300014203	Groundwater	MKWFRKDNTEGFDEETLKVMNEEMDKVYQNLDEEEKQNSSYLDYLQERILSQH*
Ga0172378_104404922	3300014203	Groundwater	MVKWFRKDNTEGFDENTLKVMNEEMQKQYDSLSDEEKRNKSYIDHLMEKILSKY*
Ga0172378_105664572	3300014203	Groundwater	LIGGSVKMEWFRKDNTEGFDEKTLKVMNEKMDKIFANLDEEERENKSYLDYLKEQILSKY
Ga0172378_109878151	3300014203	Groundwater	MEWFRKDNTEGYSDETLAVMNEEMQKVYDSFSEIEKQNESYIDHLKEQILSKY*
Ga0172381_104158022	3300014204	Landfill Leachate	MEWFRKDNTEGFSDETLAVMNIEMQKQYDSLSDEEKNNESYIDHLMEKILSQH*
Ga0172381_105443643	3300014204	Landfill Leachate	MEWFRKDNTEGFDENTLKVMNEEMKKVYDSLSDEEKNNESYIDHLMEKILSQH*
Ga0172381_105897533	3300014204	Landfill Leachate	SVCLIGGSVEMKWFRKDNTEGFDEETLKVMNEEMDKVYQNLDEEEKQNSSYLDYLQERILSQH*
Ga0172381_107950171	3300014204	Landfill Leachate	MEWFSRDNTEGYDEKTLKVMNEEMDAVYSNLDEEERNNKSYLDYLQERILSQH*
Ga0172381_109658081	3300014204	Landfill Leachate	MTEWFRKDNTEGFADETLKEMNEEMRKLYDSLSDEEKGNESYIDHLMEKILSQH*
Ga0172377_100754433	3300014206	Landfill Leachate	MKWFRRDNTEGFDEKTLKEMNVEMQKVFDSLSDEEKNNESYIDHLEEKILSRY*
Ga0172377_102933981	3300014206	Landfill Leachate	LIGGSVKMEWFRKDNTEGYSEEILKVMNEKMQKQYDSLIDEEKENKSYIDYLKEQILTSH
Ga0172377_106189252	3300014206	Landfill Leachate	VKEMTKWFSMDNTEGFDEKTLKEMNDEMDKVFANLDEEERENKSYLDYLQERILSKR*
Ga0172377_106316432	3300014206	Landfill Leachate	MEWFRKDNTEGFDVKTLKEMNEEMRKLYDSLSDEEKENKSYIDYLKEQIFSKY*
Ga0172377_108729401	3300014206	Landfill Leachate	MKWFRQDNTEGFDEETLKVMNIEMQKQYDSLSDEEKENKSYIDYLKEQILTSH*
Ga0172377_112326442	3300014206	Landfill Leachate	MEWFRRDNTEGYSEETLKEMNEEMDRVYQNLDEEERNNKSYLDYLQERILSQH*
Ga0172377_114318653	3300014206	Landfill Leachate	IGGSEKMEWFRRDNTEGFDENTLKEMNDEMDKVFANLDEEERENESYLAYLQEKILSRY*
Ga0172377_115115101	3300014206	Landfill Leachate	MAKWFRRDNTEGFDEETLKVMNEKMDKIFANLDEEERENKSYLDYLK
Ga0172377_115224501	3300014206	Landfill Leachate	MVKWFRRDNTEGYSDVTLKEMNEKMDKIFANLDEEERENKSYLDYLMEAILSQH*
Ga0172382_101486664	3300015214	Landfill Leachate	MVKWFRKDNTEGFDENTLKVMNEEMQKQYDSLSDEEKRNKSYIDHLMEKILSEHF*
Ga0172382_101626041	3300015214	Landfill Leachate	VDQIQWSEYLSVYLIGGSVKMEWFRKDNTEGFDEKTLKVMNEKMDKIFANLDEEERENKSYLDYLKEQILSKY*
Ga0172382_105154312	3300015214	Landfill Leachate	VKEMTKWFSMDNTEEFDEKTLKEMNDEMDKVFANLDEEERENKSYLDYLQERILSKR*
Ga0172382_107795781	3300015214	Landfill Leachate	MEWFTKDNTEGFDEKTLSVMNEKMRKEYDNLSDEERRNKSYIDYLKEQILSSH*
Ga0172382_109236971	3300015214	Landfill Leachate	MVEWFRSDNTEGFDEKTLAIMNEEMQKQYDNLSDEERRNESYIDYLKEQILSSY*
Ga0180029_11888683	3300019224	Anaerobic Biogas Reactor	MEWFRKDNTEGFDENTLKVMNEEMQKQYDSLSDEEKNNESYIDHLMEEILSKY
Ga0180030_10048631	3300019239	Anaerobic Biogas Reactor	MWFRKDNTEGFDEKTLKVMNEEMQKLYDSLSDEEKGNESYIDYLKEQILSSH
Ga0208693_10162495	3300025618	Anaerobic Digestor Sludge	MTEWFRRDNTEGYDEETLKKMNREMDKIYSNLDEEERENKSYIDYLKEKILSSH
Ga0208693_11333151	3300025618	Anaerobic Digestor Sludge	MEWFRRDNTEGYSDEILKEMNREMDKVYSNLDEEERENKSYIDYLKEKILSSY
Ga0208823_10794633	3300025657	Anaerobic Digestor Sludge	MTEWFRRDNTEGYDEETLKKMNREMDKVYSNLDEEERENKSYIDYLKEKILSSH
Ga0208564_11432532	3300025683	Anaerobic Digestor Sludge	MEWFRKDNTEGYSDEILKEMNEKMDKIYSNLDERERENKSYLDYLMEEILFQHS
Ga0209723_11546222	3300026311	Anaerobic Biogas Reactor	TYQFYLIGGSEKMEWFRKDNTEGYSDETLKVMNEEMQKLYNSLSEEEKGNESYIDYLKEQILSSH
Ga0209537_10556341	3300027510	Biogas Fermentantion	MVEWFRRDNTEGFDEETLKVMNVEMQKVFDSLSEEEKENKSYIDYLKEQILSKY
Ga0209075_10045031	3300027711	Agricultural Soil	MTEWFRSDNTEGFDEKTLAVMNEEMQKQYDNLSDEERRNESYIDYLKEQILSSH
Ga0265294_100743743	3300028602	Groundwater	MEWFRRDNTEGFDENTLKEMNDEMDKVFANLDEEERENESYLAYLQEKILSRY
Ga0265294_101006413	3300028602	Groundwater	MEWFRKDNTEGFDEKTLKVMNEKMDKIFANLDEEERENKSYLDYLKEQILSKY
Ga0265294_101117123	3300028602	Groundwater	MKWFRRDNTEGFDEKTLKEMNVEMQKVFDSLSDEEKNNESYIDHLEEKILSRY
Ga0265294_101184514	3300028602	Groundwater	MEWFRKDNTEGYSEEILKVMNEKMQKQYDSLIDEEKENKSYIDYLKEQILTSH
Ga0265294_101427361	3300028602	Groundwater	MTEWFSTDNTEGFDEKTLKEMNVEMQKIFDSLSDEERNNKSYLDYLQEQILSKY
Ga0265294_101740952	3300028602	Groundwater	MEWFRKDNTEGFDENTLKVMNIEMQKVFDSLSDEEKENKSYLDFLKEQILSSH
Ga0265294_101941733	3300028602	Groundwater	MQWFRQDNTEGFDEKTLKEMNVEMQKVYDSLSEEERKNESYIDYLEEQILSKY
Ga0265294_102125653	3300028602	Groundwater	MTEWFSTDNTEGFDEKTLKEMNVEMQKVYDSLSEEERNNKSYLDYLQEQILSKY
Ga0265294_103515892	3300028602	Groundwater	MEWFRQDNTEGYSDETLKEMNIEMQKLYDSLSDEEKGNESYIDHLMEKILSQH
Ga0265294_103516123	3300028602	Groundwater	MEWFRKDNTEGYSDETLAVMNEEMQKVYDSFSEIEKQNESYIDHLKEQILSKY
Ga0265294_104284133	3300028602	Groundwater	MTKWFSMDNTEGFDEKTLKEMNDEMDKVFANLDEEERENKSYLDYLQERILSKR
Ga0265294_105068791	3300028602	Groundwater	MEWFRKDNTEGFDEKTLKEMNVEMQKVYDSLSEEERKNESYIDYLEE
Ga0265294_105333791	3300028602	Groundwater	MEWFRRDNTEGYSEETLKEMNEEMQKLYDSLSDEEKGNESYIDYLQEKILSQH
Ga0265294_105766141	3300028602	Groundwater	MQWFRKDNTEGFDEKTLKEMNIEMQKVYDSLSEEERKNESYIDYLEEQILSKY
Ga0265294_105828281	3300028602	Groundwater	MQWFRKDNTEGFDEETLKVMNVEMQKVYDSLSEIEKQNESYIDHLKEQILSKY
Ga0265294_107310101	3300028602	Groundwater	MTKWFSMDNTEGFDEKTLKEMNVEMQKVFDALSDEEKGNESYIDHLKEQILSKY
Ga0265294_107407692	3300028602	Groundwater	MEWFRKDNTEGYSEETLKAMNIEMQKQYDSLSDEEKGNESYLDYLQERILSQH
Ga0265293_106389312	3300028603	Landfill Leachate	MEWFTKDNTEGFDEKTLSVMNEKMRKEYDNLSDEERRNKSYIDYLKEQILSSH
Ga0302246_10167652	3300028624	Activated Sludge	MKWFRRDNTEGYSDETLKVMNEEMQKLYDSLSDEEKGNESYIDYLKEQILSSH
Ga0302241_10233505	3300028631	Activated Sludge	MWFRKDNTEGFDEKTLKVMNEEMQKLYNSLSEEEKGNESYIDYLKEQILSSH
Ga0307354_1117243	3300029667	Anaerobic Digestor Sludge	LIGGSVEMKWFRRDNTEGYSDETLKVMNEEMQKLYNSLSDEEKGNESYIDYLKEQILSSH
Ga0134854_10171972	3300029822	Fermentation Pit Mud	MTEWFRKDNTEGYTDETMEEMNVEMQKVFDSLSDEEKENKSYIDHLMEKILSSH
Ga0134835_10250894	3300029825	Fermentation Pit Mud	MAEWFRKDNTEGFDENTLKVMNEEMDKIFENLSEEDRKNESYLDYLKEQILAKY
Ga0134835_10743072	3300029825	Fermentation Pit Mud	MVEWFRRDNTEGFNDDTLEEMNAQMDKIFENLSEEDKKNESYLDYLQEQILLKY
Ga0134835_10874681	3300029825	Fermentation Pit Mud	MAKWFSKDNTEGFDENTLTVMNEEMDAVYSNLDEEERNNKSYLDYLQERILSQH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088942

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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Geographical Distribution

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