Metagenome Family F089016

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F089016
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	71 residues
Representative Sequence	MRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Number of Associated Samples	74
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	58.10 %
% of genes near scaffold ends (potentially truncated)	33.94 %
% of genes from short scaffolds (< 2000 bps)	71.56 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (44.037 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (45.872 % of family members)
Environment Ontology (ENVO)	Unclassified (81.651 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.53% β-sheet: 20.62% Coil/Unstructured: 61.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03796	DnaB_C	36.70
PF00154	RecA	3.67
PF01467	CTP_transf_like	1.83
PF01555	N6_N4_Mtase	0.92
PF13640	2OG-FeII_Oxy_3	0.92
PF03819	MazG	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	36.70
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	36.70
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	3.67
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.92
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.92
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.06 %
Unclassified	root	N/A	33.94 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	51.38 %
Unclassified	root	N/A	33.94 %
cellular organisms	root	All Organisms → cellular organisms	14.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.76 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.84 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.50 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.84 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.50 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	11.01 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.50 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.83 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	11.01 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.50 %
Alphaproteobacteria bacterium TMED194	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	1.83 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	11.01 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	5.50 %
Alphaproteobacteria bacterium TMED194	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	1.83 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Pelagibacteraceae bacterium TMED287	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	11.01 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	2.75 %
Alphaproteobacteria bacterium TMED194	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	1.83 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	44.04 %
Unclassified	root	N/A	33.94 %
Pelagibacteraceae bacterium TMED287	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	11.01 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	2.75 %
Alphaproteobacteria bacterium TMED194	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	1.83 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10045301	Not Available	1991	Open in IMG/M
3300001460\|JGI24003J15210_10090560	Not Available	900	Open in IMG/M
3300001967\|GOS2242_1043147	All Organisms → Viruses → Predicted Viral	1664	Open in IMG/M
3300005057\|Ga0068511_1046752	Not Available	702	Open in IMG/M
3300005960\|Ga0066364_10014415	All Organisms → Viruses → Predicted Viral	2377	Open in IMG/M
3300005960\|Ga0066364_10056151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	1280	Open in IMG/M
3300005960\|Ga0066364_10181498	Not Available	727	Open in IMG/M
3300006334\|Ga0099675_1049324	All Organisms → Viruses → Predicted Viral	2814	Open in IMG/M
3300006345\|Ga0099693_1372874	Not Available	1153	Open in IMG/M
3300006735\|Ga0098038_1241578	Not Available	573	Open in IMG/M
3300009550\|Ga0115013_10002988	Not Available	9281	Open in IMG/M
3300009593\|Ga0115011_10227188	All Organisms → Viruses → Predicted Viral	1390	Open in IMG/M
3300012919\|Ga0160422_10185468	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300012920\|Ga0160423_10076873	All Organisms → Viruses → Predicted Viral	2381	Open in IMG/M
3300012920\|Ga0160423_10109499	All Organisms → Viruses → Predicted Viral	1950	Open in IMG/M
3300012920\|Ga0160423_10127332	All Organisms → Viruses → Predicted Viral	1794	Open in IMG/M
3300012920\|Ga0160423_10128675	All Organisms → Viruses	1783	Open in IMG/M
3300012920\|Ga0160423_10180839	Not Available	1472	Open in IMG/M
3300012920\|Ga0160423_10338503	Not Available	1033	Open in IMG/M
3300012928\|Ga0163110_10123075	Not Available	1763	Open in IMG/M
3300012928\|Ga0163110_10409397	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300012928\|Ga0163110_10700005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	790	Open in IMG/M
3300012936\|Ga0163109_10194532	All Organisms → Viruses → Predicted Viral	1489	Open in IMG/M
3300012936\|Ga0163109_10502448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	888	Open in IMG/M
3300012936\|Ga0163109_11325535	Not Available	525	Open in IMG/M
3300012952\|Ga0163180_10036118	All Organisms → Viruses → Predicted Viral	2909	Open in IMG/M
3300012952\|Ga0163180_10196057	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300012952\|Ga0163180_10227383	All Organisms → Viruses → Predicted Viral	1289	Open in IMG/M
3300012953\|Ga0163179_10067969	All Organisms → Viruses → Predicted Viral	2496	Open in IMG/M
3300012954\|Ga0163111_11264514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	723	Open in IMG/M
3300017726\|Ga0181381_1111885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	574	Open in IMG/M
3300017735\|Ga0181431_1024261	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300017740\|Ga0181418_1043123	All Organisms → Viruses → Predicted Viral	1134	Open in IMG/M
3300017748\|Ga0181393_1007792	Not Available	3343	Open in IMG/M
3300017753\|Ga0181407_1020624	All Organisms → Viruses → Predicted Viral	1820	Open in IMG/M
3300017753\|Ga0181407_1111769	Not Available	684	Open in IMG/M
3300017755\|Ga0181411_1030404	All Organisms → Viruses → Predicted Viral	1720	Open in IMG/M
3300017755\|Ga0181411_1099638	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300017756\|Ga0181382_1036756	All Organisms → Viruses → Predicted Viral	1459	Open in IMG/M
3300017757\|Ga0181420_1189360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	601	Open in IMG/M
3300017758\|Ga0181409_1066014	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300017759\|Ga0181414_1005580	All Organisms → Viruses → Predicted Viral	3556	Open in IMG/M
3300017760\|Ga0181408_1105530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	732	Open in IMG/M
3300017760\|Ga0181408_1201598	Not Available	505	Open in IMG/M
3300017767\|Ga0181406_1060465	All Organisms → Viruses → Predicted Viral	1165	Open in IMG/M
3300017779\|Ga0181395_1021262	All Organisms → Viruses → Predicted Viral	2219	Open in IMG/M
3300017781\|Ga0181423_1021639	All Organisms → Viruses → Predicted Viral	2634	Open in IMG/M
3300020264\|Ga0211526_1004135	All Organisms → Viruses → Predicted Viral	2450	Open in IMG/M
3300020264\|Ga0211526_1016403	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300020264\|Ga0211526_1034317	Not Available	848	Open in IMG/M
3300020274\|Ga0211658_1003253	All Organisms → Viruses → Predicted Viral	4312	Open in IMG/M
3300020274\|Ga0211658_1035210	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300020289\|Ga0211621_1000366	Not Available	11844	Open in IMG/M
3300020293\|Ga0211665_1015684	All Organisms → Viruses → Predicted Viral	1561	Open in IMG/M
3300020294\|Ga0211520_1059685	Not Available	605	Open in IMG/M
3300020301\|Ga0211650_1009441	All Organisms → Viruses → Predicted Viral	1727	Open in IMG/M
3300020323\|Ga0211673_1024271	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300020349\|Ga0211511_1083561	Not Available	755	Open in IMG/M
3300020365\|Ga0211506_1036232	All Organisms → Viruses → Predicted Viral	1403	Open in IMG/M
3300020368\|Ga0211674_10076433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium TMED194	888	Open in IMG/M
3300020368\|Ga0211674_10114212	Not Available	703	Open in IMG/M
3300020377\|Ga0211647_10006851	Not Available	5174	Open in IMG/M
3300020386\|Ga0211582_10200089	Not Available	742	Open in IMG/M
3300020388\|Ga0211678_10004138	Not Available	9665	Open in IMG/M
3300020393\|Ga0211618_10195173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	694	Open in IMG/M
3300020394\|Ga0211497_10105315	All Organisms → Viruses → Predicted Viral	1136	Open in IMG/M
3300020397\|Ga0211583_10164293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	817	Open in IMG/M
3300020397\|Ga0211583_10241095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	656	Open in IMG/M
3300020400\|Ga0211636_10005927	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6418	Open in IMG/M
3300020408\|Ga0211651_10110549	Not Available	1127	Open in IMG/M
3300020408\|Ga0211651_10397014	Not Available	508	Open in IMG/M
3300020416\|Ga0211644_10064198	All Organisms → Viruses → Predicted Viral	1486	Open in IMG/M
3300020419\|Ga0211512_10350552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	667	Open in IMG/M
3300020419\|Ga0211512_10474054	Not Available	560	Open in IMG/M
3300020420\|Ga0211580_10000198	Not Available	41048	Open in IMG/M
3300020424\|Ga0211620_10423186	Not Available	564	Open in IMG/M
3300020429\|Ga0211581_10096384	All Organisms → Viruses → Predicted Viral	1192	Open in IMG/M
3300020429\|Ga0211581_10166738	Not Available	891	Open in IMG/M
3300020430\|Ga0211622_10147537	Not Available	1013	Open in IMG/M
3300020436\|Ga0211708_10051599	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300020437\|Ga0211539_10091256	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300020437\|Ga0211539_10101861	All Organisms → Viruses → Predicted Viral	1154	Open in IMG/M
3300020442\|Ga0211559_10011902	All Organisms → Viruses → Predicted Viral	4499	Open in IMG/M
3300020450\|Ga0211641_10060522	All Organisms → Viruses → Predicted Viral	1978	Open in IMG/M
3300020454\|Ga0211548_10464397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	620	Open in IMG/M
3300020463\|Ga0211676_10012186	Not Available	7260	Open in IMG/M
3300020463\|Ga0211676_10040917	All Organisms → Viruses → Predicted Viral	3381	Open in IMG/M
3300020463\|Ga0211676_10126546	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1642	Open in IMG/M
3300020463\|Ga0211676_10200651	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300020468\|Ga0211475_10125559	All Organisms → Viruses → Predicted Viral	1322	Open in IMG/M
3300020469\|Ga0211577_10042398	All Organisms → Viruses → Predicted Viral	3369	Open in IMG/M
3300020474\|Ga0211547_10660851	Not Available	514	Open in IMG/M
3300022074\|Ga0224906_1004404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6046	Open in IMG/M
3300022074\|Ga0224906_1049108	All Organisms → Viruses → Predicted Viral	1359	Open in IMG/M
3300025120\|Ga0209535_1009076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	5748	Open in IMG/M
3300025132\|Ga0209232_1077077	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300025137\|Ga0209336_10002181	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	9335	Open in IMG/M
3300026081\|Ga0208390_1007100	All Organisms → Viruses → Predicted Viral	3663	Open in IMG/M
3300026081\|Ga0208390_1045630	All Organisms → Viruses → Predicted Viral	1170	Open in IMG/M
3300026081\|Ga0208390_1073448	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	872	Open in IMG/M
3300027859\|Ga0209503_10002576	All Organisms → Viruses	8821	Open in IMG/M
3300029318\|Ga0185543_1002192	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	5484	Open in IMG/M
3300031785\|Ga0310343_11223356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED287	568	Open in IMG/M
3300031851\|Ga0315320_10419924	Not Available	922	Open in IMG/M
3300032073\|Ga0315315_11812537	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	45.87%
Oceanic	Environmental → Aquatic → Marine → Oceanic	33.03%
Strait	Environmental → Aquatic → Marine → Strait	17.43%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.75%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	45.87%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	18.35%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	17.43%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	14.68%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	45.87%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	17.43%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.84%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	11.93%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.67%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.83%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.83%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.92%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.92%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.92%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.92%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001967	Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300006334	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0025m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020274	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)	Environmental	Open in IMG/M
3300020289	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556122-ERR599019)	Environmental	Open in IMG/M
3300020293	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556092-ERR599063)	Environmental	Open in IMG/M
3300020294	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)	Environmental	Open in IMG/M
3300020301	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX556086-ERR598997)	Environmental	Open in IMG/M
3300020323	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020368	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX556049-ERR599093)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020386	Marine microbial communities from Tara Oceans - TARA_B100000609 (ERX555990-ERR599038)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020424	Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)	Environmental	Open in IMG/M
3300020429	Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)	Environmental	Open in IMG/M
3300020430	Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300026081	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100453013	3300000117	Marine	MRNFQILKSSKYKVKYYHDINIDSKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK*
JGI24003J15210_100905601	3300001460	Marine	LLERLASMRNFQTSRSKIKYYYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWMTEHKPFGDHGFPSFLTHK*
GOS2242_10431473	3300001967	Marine	MRNSLTSRFRKNYKVKYYHDINIETKKWEVIELPSRSVINAFDFEDDAENVSFALNRNKPFGEHGFPKFLTYK*
Ga0068511_10467522	3300005057	Marine Water	MRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK*
Ga0066364_100144154	3300005960	Marine	MRNSLTSRFKKTYKVKYYYDINVDTKKWEVIELPSNSVIQVYDFKEDAEKTSNLLNENKPFGDKGYPNFLKHK*
Ga0066364_100561512	3300005960	Marine	YLTTLHLLERLANMRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK*
Ga0066364_101814981	3300005960	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNHNKPFGDYGFPKFLTHK*
Ga0099675_10493243	3300006334	Marine	LLERLANMRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK*
Ga0099693_13728742	3300006345	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNHNKPFGDYGFPKFLT
Ga0098038_12415782	3300006735	Marine	MKNFRTSRSNIKYHYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWM
Ga0115013_100029889	3300009550	Marine	MKNFRTLRSSRYKVKYYHDINVNSKKWEVIELPSKKIIRIYNFEDDAEQQADVLNTTKPFGDFGFPSFLTHK*
Ga0115011_102271882	3300009593	Marine	MRNFRTSRSNIKYHYDINVESKKWEVIELPSRKIIREYDFEDDAKVVAKWMTEHKPFGDYGFPSFLTHK*
Ga0160422_101854682	3300012919	Seawater	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNNNKPFGDYGFPKFLTYK*
Ga0160423_100768732	3300012920	Surface Seawater	VKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNTSFELNHNKPFGDYGFPKFLTYK*
Ga0160423_101094993	3300012920	Surface Seawater	FRTSRSKVKYYHDINVETKKWEVIELPTRKIIRVCNFEDDAEQQAYVLNTNKPFGDFGFPSFLTHK*
Ga0160423_101273323	3300012920	Surface Seawater	IETKKWEVIELPSRSVIKIFDFEDDAENISLALNQNKPFGEYGFPKFLTYK*
Ga0160423_101286752	3300012920	Surface Seawater	MKNSLTSRSKVKYYHDINIETKEWEVVELPSRNIIMSYKFEEDAENVCNSLNDKRPFGDYGFPKFLTYK*
Ga0160423_101808391	3300012920	Surface Seawater	IETKKWEVIELPSRSVIKIFDFEDDAENISLALNQNKPFGEHGFPKFLTYK*
Ga0160423_103385032	3300012920	Surface Seawater	VTSRFRKTYKVQYYHDVNIDTKKWEVIELPTNNVIKTFDFEEDAEEVSNSLNKNKPFGDRGFPKFLIHK*
Ga0163110_101230753	3300012928	Surface Seawater	MRNFRTSRSKVKYYHDINVETKKWEVIELPTRKIIRVCNFEDDAEQQADVLNTNKPFGDFGFPSFLTHK*
Ga0163110_104093972	3300012928	Surface Seawater	MKNFRTSRSKVKYYHDVNVESKKWEVIELPTRKIIREYDFEDDAKDSAKWMTEHKPFGDHGFPSFLTHK*
Ga0163110_107000052	3300012928	Surface Seawater	VKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNHNKPFGDYGFPKFLTYK*
Ga0163109_101945321	3300012936	Surface Seawater	LTTLHLLERLANMRNFRTSRSKVKYYHDINVETKKWEVIELPTRKIIRVCNFEDDAEQQADVLNTNKPFGDFGFPSFLTHK*
Ga0163109_105024482	3300012936	Surface Seawater	VTSRFRKTYKVQYYHDVNIDTKKWEVIELPTNNVIKTFDFEEDAEEVSNSLNKNKPFGDRGFPRFLIHK*
Ga0163109_113255351	3300012936	Surface Seawater	KVKYYHDINVETKKWEVIELPTRKIIRVYNFEDDAEQQAYVLNTNKPFGDFGFPSFLTHK
Ga0163180_100361183	3300012952	Seawater	MKNFRTLRSSRPKVKYYHDINVETKKWEVIELPSRRIIKIYHFEEDAEQQADALNTNKPFGDHGFPNFLTHK*
Ga0163180_101960572	3300012952	Seawater	MRNFRTSRSNIKYHYDINVESKKWEVIELPSKKIIREYDFEDDAKVVAKWMTEHKPFGEHGFPSFLTHK*
Ga0163180_102273832	3300012952	Seawater	MRNFRTSKFKVKYYHDINVETKKWEVIELPSRKIIKVYNFEEDAERQTVVLNTNKPFGDHGFPNFLTHK*
Ga0163179_100679693	3300012953	Seawater	MRNFRTSRSNIKYHYDINVESKKWEVIELPSRKIIREYDFEDDAKVVAKWMTEHKPFGDHGFPSFLTHK*
Ga0163111_112645141	3300012954	Surface Seawater	KSLYLTTLHLLERLANMRNFRTSRSKVKYYHDINVETKKWEVIELPTRKIIRVCNFEDDAEQQADVLNTNKPFGDFGFPSFLTHK*
Ga0181381_11118852	3300017726	Seawater	SKVKYYHDINVNTKKWEVIELPTRKIIKVYNFEDDAEQKADVLNTNKPFGDFGFPSFLTH
Ga0181431_10242611	3300017735	Seawater	MRNFRTSRSNIKYHYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWMTEHKPFGDH
Ga0181418_10431231	3300017740	Seawater	MKNFRTLRSSRYKVKYYHDINVNSKKWEVIELPSKKIIRIYNFEDDAEQQADVLNTTKPFGDF
Ga0181393_10077922	3300017748	Seawater	MKNSLTSRYKKNYKVKYYHDINIDTKKWEIIELPSQRIIRSCNFKEDAEHYSNVLNKNKPFGDYGFPNFLTYK
Ga0181407_10206243	3300017753	Seawater	KSSKYKVKYYHDINIDSKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181407_11117692	3300017753	Seawater	MRNFRTLKSSRYKVKYYHDINVTSKKWEVIELPSRRIVQSYHFEEDAEQQADVLNTN
Ga0181411_10304041	3300017755	Seawater	SKYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181411_10996381	3300017755	Seawater	LHLLERLASMRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIVCKHHFEEDAEKVSNVLNTNKPFGDYGFPNFLTHK
Ga0181382_10367562	3300017756	Seawater	MKSSLTSRYKKNYKVKYYHDINIDTKKWEIIELPSQRIIRSCKFKEDAEHYSNILNKTKPFGDYGFPNFLTYK
Ga0181420_11893602	3300017757	Seawater	LLERLVSMRNFRTSRSNIKYHYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWMTEHKSFGDYGFPSFLTHK
Ga0181409_10660141	3300017758	Seawater	LHLLERLASMRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181414_10055803	3300017759	Seawater	LLERLASMRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181408_11055302	3300017760	Seawater	EEYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181408_12015982	3300017760	Seawater	MRNFRTLKSSRYKVKYYHDINVTSKKWEVIELPSRRIVCKHHFEEDAEKVSNVLNTNKPFGDYGFPNFL
Ga0181406_10604651	3300017767	Seawater	RYKVKYYHDINVTSKKWEVIELPSRRIICTYHFEDDAQNISNVLNTKKPFGDYGFPNFLTHK
Ga0181395_10212621	3300017779	Seawater	MRNFRTSRSNIKYHYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWMTEHKP
Ga0181423_10216395	3300017781	Seawater	MKNSLTSRYKKNYKVKYYHDINIDTKKWEIIELPSQRIIRSCKFKEDAEHYSNILNKTKPFGDYGFPNFLTYK
Ga0211526_10041353	3300020264	Marine	KVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0211526_10164032	3300020264	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNTSFELNHNKPFGDYGFPKFLTYK
Ga0211526_10343172	3300020264	Marine	MRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGD
Ga0211658_10032533	3300020274	Marine	MRNFRTSRSKVKYYHDINVNTKKWEVIELPTRKIIKVYNFEDDAEQKADVLNTNKPFGDFGFPSFLTHK
Ga0211658_10352102	3300020274	Marine	MRNSLTSRFRKTYKVKYYHDINVETKKWEVIELPSRSVIKMFDFEDDAQNVSFELNHNKPFGDYGFPKFLTYK
Ga0211621_10003668	3300020289	Marine	MRNSLTSRFKKTYKVKYYYDINVDTKKWEVIELPSNSVIQVYDFKEDAEKTSNLLNENKPFGDKGYPNFLKHK
Ga0211665_10156842	3300020293	Marine	LLERLANMRNFRTSRSKVKYYHDINVETKKWEVIELPTRKIIRVCNFEDDAEQQADVLNTNKPFGDFGFPSFLTHK
Ga0211520_10596852	3300020294	Marine	MRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNV
Ga0211650_10094412	3300020301	Marine	LLERLANMRNFRTSRSKVKYYHDINVETKKWEVIELPTRKIIREYDFEDDAKDSAKWMTEHKPFGDHGFPSFLTHK
Ga0211673_10242711	3300020323	Marine	MKSSLTSRYKKNYKVKYYHDINIDTKRWEIIELPSQRIIRSCKFEEDAEYYSNILNKNKPFGDLGFPNFLT
Ga0211511_10835611	3300020349	Marine	LLERLASMRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIICTYHFEDDAQNVSNVLNTKKPFGDYGFPNFLTHK
Ga0211506_10362321	3300020365	Marine	MKNFRTSRSKIKYYYDINVESKKWEVIELPSRKIIREYDFEEDAKDSAKWMTEHKPFGDHGFPSFLTHK
Ga0211674_100764332	3300020368	Marine	LTSRFKKTYKVKYYYDINVDTKKWEVIELPSNSVIQVYDFKEDAEKTSNLLNENKPFGDKGYPNFLKHK
Ga0211674_101142122	3300020368	Marine	MKSSLTSRYKKNYKVKYYHDINIDTKRWEIIELPSQRIIRSCKFEEDAEYYSNILNKNKPFGDLGFPNFLTYK
Ga0211647_100068513	3300020377	Marine	LLERLANMRNSPISRFPRRAYKVKYYYDINPDTQKWEVIELPSNNVIRTYNFKEDASELSSELNAIKPFGDFGFPNFLSHK
Ga0211582_102000892	3300020386	Marine	MRNSLTSRFRKNHKVKYYHDINIETKKWEVIELPSRSVINAFDFEEDAENVSIALNQNKPFGEHGFPKFLTYK
Ga0211678_100041383	3300020388	Marine	LLERLASMRNFRTLKSSRYKVKYYHDINVTSKKWEVIELPSRRIVQSYHFEEDAEQQADVLNTNKPFGDHGFPNFLTHK
Ga0211618_101951732	3300020393	Marine	MRNSLTSRFKKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNQNKPFGDYGFPKFLTYK
Ga0211618_102263472	3300020393	Marine	LLERLANMRSSLTSRFPRKTYKVKYYHDINPDTQKWEVIELPSNNVIKTYNFEEDASDLSAHLNETKPFGNHGFPNFLSHK
Ga0211497_101053152	3300020394	Marine	MRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0211583_101642932	3300020397	Marine	MKNSVTSRFRKTYKVQYYHDVNIDTKKWEVIELPTNHVIKTFDFEEDAEEVSNSLNKNKPFGDRGFPRFLIHK
Ga0211583_102410952	3300020397	Marine	VKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNQNKPFGDYGFPKFLTYK
Ga0211583_102823172	3300020397	Marine	MRSSLTSRFPRKTYKVKYYHDINPDTQKWEVIELPSNNVIKTYNFEEDASDLSAQLNETKPFGNHGFPNFLSHK
Ga0211636_100059275	3300020400	Marine	MRNSLTSRFRKNHKVKYYHDINIETKKWEVIELPSRSVINAFDFEEDAENVSVALNQNKPFGEHGFPKFLTYK
Ga0211651_101105492	3300020408	Marine	MRNSLTSRFKKTYKVKYYHDINIETKKWEVIELPSRSVINAFDFEEDAENVSLALNQNKPFGEHGFPKFLTYK
Ga0211651_103970142	3300020408	Marine	LLERLANMKNFRTSRSKIKYYHDINVESKKWEVIELPTRKIIREYDFEDDAKDSAKWMTEHKPFGDHGFPSFLTHK
Ga0211644_100641982	3300020416	Marine	MRNSPISRFPRRAYKVKYYYDINPDTQKWEVIELPSNNVIRTYNFKEDASELSSELNAIKPFGDFGFPNFLSHK
Ga0211512_103505522	3300020419	Marine	LLERLANMKNFRTLRSSRPKVKYYHDINVETKKWEVIELPSRRIIKIYHFEEDAEQQADALNTNKPFGDHGFPNFLTHK
Ga0211512_104740542	3300020419	Marine	MRNFRTSKFKVKYYHDINVETKKWEVIELPSRKIIKVYNFEEDAERQTVVLNTNKPFGDHGFPNFLTHK
Ga0211580_100001988	3300020420	Marine	LLERLANMRNSQTSRFPRRAYKVKYYHDINPDTQKWEVIELPSNNVIITYDFEEDASEVSHKLNTSKPFGDYGFPNFLSHK
Ga0211620_102743242	3300020424	Marine	LLERLANMRSSLTSRFHRKTYKVKYYHDINPDTQKWEVIELPSNNVIKTYNFEEDASDLSAQLNTTKPFGDHGFPNFLSHK
Ga0211620_104231861	3300020424	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVINAFDFEDDAQNVSFELNKNKPFGDCGFPK
Ga0211581_100963842	3300020429	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVINAFDFEEDAENVSVALNQNKPFGEHGFPKFLTYK
Ga0211581_101667382	3300020429	Marine	HLLERLASMRNFRTSKSKVKYYHDINVETKKWEVVELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0211622_101475371	3300020430	Marine	ASMRNFRTSRSKVKYYHDINVETKKWEVIELPSKRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0211708_100515992	3300020436	Marine	MKNSVTSRFRKTYKAQYYHDVNIDTKKWEVIELPTNNVIKTFDFEEDAEEVSNSLNKNKPFGDRGFPRFLIHK
Ga0211539_100912562	3300020437	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNQNKPFGDYGFPKFLTYK
Ga0211539_101018612	3300020437	Marine	MKNSLTSRSKVKYYHDINIETKEWEVIELPSRNIIMSYKFEEDAENICNSLNGKKPFGDYGFPKFLTYK
Ga0211559_100119022	3300020442	Marine	MKNSLTSRSKVKYYHDINIETKEWEVVELPSRNIIMSYKFEEDAENVCNSLNDKRPFGDYGFPKFLTYK
Ga0211641_100170103	3300020450	Marine	MRSSLTSRFPRKTYKVKYYHDINPDTQKWEVIELPSNNVIKTYNFEEDAADLSTKLNETKPFGNHGFPNFLSHK
Ga0211641_100605222	3300020450	Marine	MKNLVTSRFRKTYKVRYYYDVNIDTKKWEVIELPTNNVIKTFDFEEDAEEVSNSLNKNKPFGDRGFPRFLIHK
Ga0211548_104643971	3300020454	Marine	KMKNLFLTTRLLLERLASMRNFQILKSNRLKVQYHHDINVESKKWEVIELPTNNVIITYDFEEDAKETAIRLNKQKPFGDGGFPNFLTHK
Ga0211676_100121863	3300020463	Marine	LLERLANMRNFRTSKFKVKYYHDINVETKKWEVIELPSRKIIREYDFEDDAKDSAKWMTEHKPFGDHGFPNFLTHK
Ga0211676_100409173	3300020463	Marine	MRNSLTSRFKKTYKVKYYYDINVDTKKWEVIELPSNSVIKVYEFKEDAEKTSNLLNKNKPFGDKGYPNFMKHK
Ga0211676_101265461	3300020463	Marine	KNSLTSRYKKNYKVKYYHDINIDTKKWEIIELPSQRIIRSCKFKEDAEHYSNVLNKNKPFGDYGFPNFLTYK
Ga0211676_102006512	3300020463	Marine	LLERLASMRNFRTSRSNIKYHYDINVESKKWEVIELPSRKIIREYDFEDDAKVVAKWMTEHKPFGDHGFPSFLTHK
Ga0211475_101255592	3300020468	Marine	MRNFRTSKFKVKYYHDINVETKKWEVIELPSRRIIKIYHFEEDAEQQADALNTNKPFGDHGFPNFLTHK
Ga0211577_100423982	3300020469	Marine	MKSSLTSRYKKNYKVKYYHDINIDTKKWEIVELPSKRIIRSCKFKEDAEHYSNVLNKNKPFGDYGFPNFLTYK
Ga0211547_106608511	3300020474	Marine	MRNFRTSRSNIKYHYDINVESKKWEVIELPSRKIIREYDFEDDAKVVAKWMTEHKPFGDH
Ga0224906_10044043	3300022074	Seawater	LLERLANMTNFRTSRSKVKYYHDINVNTKKWEVIELPTRKIIKVYNFEDDAEQKADVLNTNKPFGDFGFPSFLTHK
Ga0224906_10491081	3300022074	Seawater	MRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIVCKHHFEEDAEKVSNVLNTNKPFGDYGFPNFLTHK
Ga0209535_10090765	3300025120	Marine	LLERLASMRNFQTSRSKIKYYYDINVESKKWEVIELPTRKIIREYDFEDDAKVVAKWMTEHKPFGDHGFPSFLTHK
Ga0209232_10770772	3300025132	Marine	LLERLASMKNFRTLRSSRYKVSYYHDINVNSKKWEVIELPSKKIIRIYNFEDDAEQQADVLNTTKPFGDFGFPSFLTHK
Ga0209336_100021815	3300025137	Marine	LLERLASMRNFQILKSSKYKVKYYHDINVESKKWEVIELPSRRIVCKHHFEEDAEKVSNVLNTNKPFGDYGFPNFLTHK
Ga0208390_10071002	3300026081	Marine	LLERLANMRNFRTSKSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0208390_10456302	3300026081	Marine	MRNSLTSRFKKTYKVKYYHDINIETKKWEVIELPSRSVINAFDFEEDAENVSIALNQNKPFGEHGFPK
Ga0208390_10734482	3300026081	Marine	MKNSLTSRSKVKYYHDVNIETKEWEVIELPSRNIIMSYKFEEDAKNVCNSLNDKRPFGDYGFPKFLTYK
Ga0209503_100025766	3300027859	Marine	LLERLASMKNFRTLRSSRYKVKYYHDINVNSKKWEVIELPSKKIIRIYNFEDDAEQQADVLNTTKPFGDFGFPSFLTHK
Ga0185543_10021925	3300029318	Marine	MRNSLTSRFRKTYKVKYYHDINIETKKWEVIELPSRSVIKTFDFEDDAQNISFELNHNKPFGDYGFPKFLTYK
Ga0310343_112233562	3300031785	Seawater	SLYLTTLHLLERLANMRNFRTSRSKVKYYHDINVETKKWEVIELPSRRIIKVYNFEEDAENQAVVLNTNKPFGDFGFPNFLTHK
Ga0315320_104199242	3300031851	Seawater	MRNFRTSRSNIKYHYDINVESKKWEVIELPSRKIIREYDFEDDAKVVAKWMTEHKPFGDYGFPSFLTHK
Ga0315315_118125372	3300032073	Seawater	MTNFRTSRSKVKYYHDINVNTKKWEVIELPTRKIIKVYNFEDDAEQKADVLNTNKPFGDFGFPSFLTHK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences