NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089025

Metagenome Family F089025

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089025
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 46 residues
Representative Sequence MNKKHYAFFLKKNRRKNPIAKVLKFFTPQVIEDKTKYRRKDKHVRKR
Number of Associated Samples 76
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 27.55 %
% of genes near scaffold ends (potentially truncated) 50.46 %
% of genes from short scaffolds (< 2000 bps) 81.65 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.138 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(62.385 % of family members)
Environment Ontology (ENVO) Unclassified
(94.495 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.156 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.67%    β-sheet: 0.00%    Coil/Unstructured: 65.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF00313CSD 14.68
PF01106NifU 3.67
PF00856SET 2.75
PF01327Pep_deformylase 0.92
PF03592Terminase_2 0.92
PF02945Endonuclease_7 0.92
PF137592OG-FeII_Oxy_5 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 3.67
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.14 %
All OrganismsrootAll Organisms34.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001717|JGI24522J20083_1005901Not Available801Open in IMG/M
3300001727|JGI24529J20061_102328All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300001730|JGI24660J20065_1024757All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote549Open in IMG/M
3300001731|JGI24514J20073_1019820All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300001735|JGI24520J20079_1003939All Organisms → cellular organisms → Bacteria → Proteobacteria892Open in IMG/M
3300001735|JGI24520J20079_1006659Not Available676Open in IMG/M
3300002514|JGI25133J35611_10176981Not Available571Open in IMG/M
3300002518|JGI25134J35505_10074666All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300002760|JGI25136J39404_1062635Not Available692Open in IMG/M
3300002760|JGI25136J39404_1072144All Organisms → cellular organisms → Bacteria → Proteobacteria644Open in IMG/M
3300002760|JGI25136J39404_1091260Not Available572Open in IMG/M
3300006325|Ga0068501_1299445Not Available676Open in IMG/M
3300006339|Ga0068481_1081693Not Available1587Open in IMG/M
3300006340|Ga0068503_10455159Not Available1168Open in IMG/M
3300006340|Ga0068503_10538385Not Available938Open in IMG/M
3300006736|Ga0098033_1200402Not Available553Open in IMG/M
3300006738|Ga0098035_1227095Not Available618Open in IMG/M
3300006751|Ga0098040_1060574Not Available1166Open in IMG/M
3300006751|Ga0098040_1168926All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae644Open in IMG/M
3300006751|Ga0098040_1256086All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae506Open in IMG/M
3300006752|Ga0098048_1160161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium669Open in IMG/M
3300006753|Ga0098039_1063434Not Available1285Open in IMG/M
3300006754|Ga0098044_1115534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1093Open in IMG/M
3300006754|Ga0098044_1132900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1004Open in IMG/M
3300006923|Ga0098053_1045042All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales919Open in IMG/M
3300006923|Ga0098053_1075786Not Available683Open in IMG/M
3300006925|Ga0098050_1159793Not Available566Open in IMG/M
3300006925|Ga0098050_1165281Not Available555Open in IMG/M
3300006928|Ga0098041_1140864All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae777Open in IMG/M
3300008050|Ga0098052_1078800Not Available1368Open in IMG/M
3300008050|Ga0098052_1313209Not Available592Open in IMG/M
3300008050|Ga0098052_1325013Not Available579Open in IMG/M
3300008216|Ga0114898_1005516All Organisms → cellular organisms → Bacteria5585Open in IMG/M
3300008216|Ga0114898_1210653All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300008218|Ga0114904_1040473All Organisms → Viruses → Predicted Viral1253Open in IMG/M
3300008220|Ga0114910_1208189Not Available536Open in IMG/M
3300009173|Ga0114996_10184727Not Available1692Open in IMG/M
3300009412|Ga0114903_1115548All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300009413|Ga0114902_1000762Not Available15688Open in IMG/M
3300009413|Ga0114902_1003551Not Available6083Open in IMG/M
3300009413|Ga0114902_1010471Not Available3219Open in IMG/M
3300009418|Ga0114908_1190457All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300009593|Ga0115011_11378451Not Available617Open in IMG/M
3300009603|Ga0114911_1100840Not Available842Open in IMG/M
3300009603|Ga0114911_1195581Not Available551Open in IMG/M
3300009619|Ga0105236_1042494Not Available588Open in IMG/M
3300009619|Ga0105236_1053504Not Available541Open in IMG/M
3300010150|Ga0098056_1104241All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300010151|Ga0098061_1257155Not Available607Open in IMG/M
3300010153|Ga0098059_1321459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium590Open in IMG/M
3300010155|Ga0098047_10133425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium963Open in IMG/M
3300011013|Ga0114934_10022160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.3510Open in IMG/M
3300017721|Ga0181373_1071409Not Available620Open in IMG/M
3300017775|Ga0181432_1206591Not Available616Open in IMG/M
3300020472|Ga0211579_10198657All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300024344|Ga0209992_10167666All Organisms → Viruses948Open in IMG/M
(restricted) 3300024517|Ga0255049_10027544All Organisms → cellular organisms → Bacteria2598Open in IMG/M
3300025044|Ga0207891_1039338Not Available563Open in IMG/M
3300025046|Ga0207902_1022919Not Available741Open in IMG/M
3300025047|Ga0207897_132540Not Available513Open in IMG/M
3300025049|Ga0207898_1048538Not Available522Open in IMG/M
3300025052|Ga0207906_1013290Not Available1153Open in IMG/M
3300025096|Ga0208011_1059621All Organisms → Viruses867Open in IMG/M
3300025096|Ga0208011_1119016All Organisms → Viruses547Open in IMG/M
3300025098|Ga0208434_1067287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium750Open in IMG/M
3300025125|Ga0209644_1017589Not Available1533Open in IMG/M
3300025125|Ga0209644_1078321Not Available773Open in IMG/M
3300025125|Ga0209644_1106831Not Available663Open in IMG/M
3300025128|Ga0208919_1091529Not Available987Open in IMG/M
3300025128|Ga0208919_1250645Not Available514Open in IMG/M
3300025131|Ga0209128_1045167All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M1655Open in IMG/M
3300025131|Ga0209128_1120133All Organisms → Viruses821Open in IMG/M
3300025132|Ga0209232_1027818All Organisms → Viruses2178Open in IMG/M
3300025141|Ga0209756_1043126All Organisms → Viruses2278Open in IMG/M
3300025141|Ga0209756_1099030All Organisms → Viruses1263Open in IMG/M
3300025141|Ga0209756_1119537Not Available1104Open in IMG/M
3300025141|Ga0209756_1338689All Organisms → Viruses516Open in IMG/M
3300025216|Ga0207883_1035806Not Available616Open in IMG/M
3300025264|Ga0208029_1041850All Organisms → Viruses1002Open in IMG/M
3300025267|Ga0208179_1089531Not Available622Open in IMG/M
3300025270|Ga0208813_1032328Not Available1229Open in IMG/M
3300025873|Ga0209757_10114935Not Available830Open in IMG/M
3300027838|Ga0209089_10592401Not Available585Open in IMG/M
3300028018|Ga0256381_1040457Not Available734Open in IMG/M
3300028018|Ga0256381_1042529All Organisms → Viruses711Open in IMG/M
3300028022|Ga0256382_1001802Not Available2891Open in IMG/M
3300028487|Ga0257109_1240567Not Available500Open in IMG/M
3300031701|Ga0302120_10279229Not Available614Open in IMG/M
3300031802|Ga0310123_10698944Not Available616Open in IMG/M
3300031803|Ga0310120_10667493Not Available504Open in IMG/M
3300032006|Ga0310344_10330783All Organisms → Viruses1304Open in IMG/M
3300032006|Ga0310344_10581319All Organisms → Viruses959Open in IMG/M
3300032360|Ga0315334_10631333Not Available925Open in IMG/M
3300032820|Ga0310342_101004814Not Available978Open in IMG/M
3300032820|Ga0310342_101985811Not Available695Open in IMG/M
3300033742|Ga0314858_065169Not Available900Open in IMG/M
3300034629|Ga0326756_031969Not Available635Open in IMG/M
3300034654|Ga0326741_037756Not Available831Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine62.39%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean14.68%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.75%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine2.75%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.75%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.83%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater1.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.92%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.92%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.92%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001717Marine viral communities from the Pacific Ocean - LP-47EnvironmentalOpen in IMG/M
3300001727Marine viral communities from the Pacific Ocean - LP-55EnvironmentalOpen in IMG/M
3300001730Marine viral communities from the Deep Pacific Ocean - MSP-134EnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025047Marine viral communities from the Pacific Ocean - LP-42 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025216Marine viral communities from the Deep Pacific Ocean - MSP-109 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028487Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000mEnvironmentalOpen in IMG/M
3300031701Marine microbial communities from Western Arctic Ocean, Canada - AG5_BottomEnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24522J20083_100590123300001717MarineMNRKHYAFFLKKNRRKDPIAKILKFFTPQVIEDKTKYRRKEKHVRTRPFWEST*
JGI24529J20061_10232813300001727MarineVNRKHYAFFLKKNRRKNPIAKTLKFFTPQVIEDKTKYRRK
JGI24660J20065_102475733300001730Deep OceanMDRTKYTFFLKKNRRKNPIAKALKFFTPKVIRDKTKYRRKDVKIW
JGI24514J20073_101982013300001731MarineVNKKHYAFLIKKRRKKSNPIAKVLKFFTPKVIRDKTKYGRKEKHVQ
JGI24520J20079_100393913300001735MarineMHKKHYAFFLKKNRRRNPVAKALKFFTPQVIRDKTKYERKEKHVRKRSFWEST*
JGI24520J20079_100665913300001735MarineMNRKHYASFLKKNRRKNPIAKVLKFFTPQVIEDKTKYSRKKD
JGI25132J35274_109915433300002483MarineLNKKSYSFFLKKNRRKNPIANALKTFTQKIVPDKKKYDRKKIK
JGI25133J35611_1017698123300002514MarineMNKKAYAFFLKKNRPRNPVAQVLKFFTPQIIKDKKKYKRKEKHVQRSFWERD*
JGI25134J35505_1007466633300002518MarineLNKKAYAYFLKKNRRKNPVARVLKFFTPTVIKDKKKYTRKEKHGQQDWKNS*
JGI25136J39404_106263523300002760MarineMNRKHYAFFLKKNRRKDPIAKILKFFTPQVIEDKKKYRRKEKHVRTRSFWEST*
JGI25136J39404_107214413300002760MarineMNRKHYAFFLKKNRRKDPIAKILKFFTPQVIEDKTKYRRKEKHVRTRS
JGI25136J39404_109126033300002760MarineKKSYAFFLKKRRKKSNPIARVLKFFTPQVIKDKTKYRRKEKHVQKDIWSIRNGSPGD*
Ga0068501_129944543300006325MarineVNKKHYAFFLKKNRRRKRSNPIAQALKFFTPKTIPNKKKYDR
Ga0068481_108169363300006339MarineMNKKAYAFFLKKNRKKPNPIAKALKFFTPKVIRDKKKYNRKTD
Ga0068503_1045515963300006340MarineMNKKAYAFFLKKNRKKPNPIAKALKFFTPKVIRDKKK*
Ga0068503_1053838513300006340MarineVNKKAYAFFLKKNRRKNPVARILKFFTPKVIRDKTKYGRKEKHVRTRSFWES
Ga0098033_120040223300006736MarineKGEVNRKHYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYRRKDKHVKRTV*
Ga0098035_122709513300006738MarineMNKKAYAFFLKKNRKRNPIAKALKFFTPKVIRDKKKYRRQDVKI
Ga0098040_106057453300006751MarineFFLKRNRRKNPVARVLKFFTPTVIKDKKKYTRKEKHGQQDWKNS*
Ga0098040_116892613300006751MarineLNKKHYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYTRKEKHVHKNWKND*
Ga0098040_125608633300006751MarineLNKKSYAFFLKKNRRKNPIAKALKFFTPKVVPDKKKYDRKK
Ga0098048_116016133300006752MarineMSFVSMNKKSYAFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHAKRYT*
Ga0098039_102003013300006753MarineNPIAKALKFFTPQVIEDKTKYTRKEKHVHKNWKNN*
Ga0098039_106343433300006753MarineMNRKHYAFFLKKNRRKNPIAKTLKFYTPQVIEDKTKYRRKDKHVKRTI*
Ga0098044_111553433300006754MarineMNKKHYAFFLKKNRRPKKHNPIAQLLNVFTPQVIPDKKKYKRKDKHVKRYT*
Ga0098044_113290043300006754MarineLNKKAYAFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHAKRYT*
Ga0098054_132446713300006789MarineLNKKAYVFFLKKNRRRNPIANALKTFTQKIVPDKKKYDRKKIKKSF
Ga0098055_130170443300006793MarineMNKKAYAFFLKKNRRKNPIANALKTFTQKIVPDKKKYDRKK
Ga0098053_104504243300006923MarineMNKKAYAFFLKKNRKRNPIAQVLKFFTPKRIPNKKKYDRKKSTQILRRDRSG*
Ga0098053_107578613300006923MarineVNKKHYAFFLKKNRRPKHSNPIAQALKFFTPKVIKNKKKY
Ga0098050_115979343300006925MarineMNKKSYAFFHKKNRPRNPIARALNFFTQQIVPDKKKFKRKD
Ga0098050_116528113300006925MarineLNKKSYAFFLKKNRRKNPVAKVLKFFTPTVIKDKKKYTRKEKHGQQDWKNS*
Ga0098041_113496653300006928MarineMNKKAYAFFLKKNRRKNPVANALKTFTQKIVPDKKKYDRK
Ga0098041_114086433300006928MarineLNKKLYAYFLKKNRRKNPVAKILKFFTPTVIKDKKKYTRKEKHG
Ga0098041_118619243300006928MarineMNKKAYAFFLKKNRRRNPIANALKTFTQKIVPDKKKYDRKKIK
Ga0098052_107880013300008050MarineMNKKHYAFFLKKNRKKNPIAKDLKFFTPQVIQDKTKYRRKEKHVQKRSFWESN*
Ga0098052_131320913300008050MarineVNKKHYAFFLKKNRRKNPIAKVLKFFTPQVIRDKTKYRRKEKHVRKRSFWE
Ga0098052_132501333300008050MarineVNKKAYAFFLKKRRKKKNPIAKALKFFTPKVIKNKKLY
Ga0098052_137401233300008050MarineMNKKAYAFFLKKNRRRNPIANALKTFTQKIVPDKKKYDRKKIKK
Ga0114898_1005516143300008216Deep OceanMNKKTYAFFLKKNRRKNPIAKALKFFTPKVIQDKKKYNRKRDDQD*
Ga0114898_121065313300008216Deep OceanNKKAYAFFLKKNRKRNPIAQVLKFFTPKRIPNKKKYDRKKSTQILRRDRSG*
Ga0114904_104047323300008218Deep OceanLNKKLYAFFLKKNRRKNPVAKILKFFTPTVIKDKKKYTRKEKHGRKIFERI*
Ga0114910_120818923300008220Deep OceanMNKKHYAFFLKKNRRKNPVVKALKFFTPKVIRDKTKYR*
Ga0114996_1018472733300009173MarineMNKKAYAFFLKKNRKKNPIAKVLKFFTPQVIEDKTKYRRKDKHVKQPI*
Ga0114903_111554833300009412Deep OceanHIVMNKKAYAFFLKKNRKRNPIAQVLKFFTPKRIPNKKKYDRKKSTQILRRDRSG*
Ga0114902_100076283300009413Deep OceanLNKKLYAYFLKKNRRKNPVAKILKFFTPTVIKDKKKYTRKEKHGRKIFERI*
Ga0114902_1003551143300009413Deep OceanMNRKHYAFFLKKNRRKNPVAKDLKFFTPQVIEDKTKYRRKDKHVKRTV*
Ga0114902_101047123300009413Deep OceanVNKKAYAFFLKKRRKKSNPIARVLKFFTPKVIPNKKKYDRKKINLEHLGG*
Ga0114908_119045713300009418Deep OceanKAYAFFLKKNRKRNPIAQVLKFFTPKRIPNKKKYDRKKSTQILRRDRSG*
Ga0115011_1137845113300009593MarineLNKKAYTFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHAKRYT*
Ga0114911_110084043300009603Deep OceanMNKKHYAFFLKKNRKKLKRSNPIAQVLKFFTPKVIRNKKRYD
Ga0114911_119558133300009603Deep OceanMNRKHYAFFLKKNRRKNPIAKTLKFFTPQVIEDKTKYR
Ga0105236_104249433300009619Marine OceanicMNKKAYAFFLKKNRKKPNPIAKALKFFTPKTIRDKKKYRRQD
Ga0105236_105350433300009619Marine OceanicMNRKHYAFFLKKNRRNKNPIAKDLKFFTPQVIEDKTKYRRKDKYVRTRSFWQS
Ga0098056_110424113300010150MarineYAFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHAKRYT*
Ga0098061_107630263300010151MarineLNKKAYVFFLKKNRRRNPIANALKTFTQKIVPDKKKYDRKK
Ga0098061_125715523300010151MarineLNKKAYRHFLKKNRRNNPMAKILKFFTPKVIKDKKK
Ga0098059_132145913300010153MarineMNKKVYSFFLKKNRRKNPIAQILNAFTPQVIPDKKKYKRKDKHVKRYT*
Ga0098047_1013342523300010155MarineMNKKSYAFFLKKNRRRNPIAQILNVFTPQVIPDKKKFKRKDKHVKRYT*
Ga0114934_10022160103300011013Deep SubsurfaceLNKKSYAFFLKKNRRRNPIARALNFFTQQIVPDKKKYKRKDKHVKRYT*
Ga0181373_107140913300017721MarineLNKKAYRHFLKKNRRNNPMAKILKFFTPKVIKDKN
Ga0181432_120659113300017775SeawaterFFLKKNRRKNPVAKILKFFTPQVIRNKKLYTRKLKHGKSTKIWS
Ga0211579_1019865733300020472MarineMNKKAYAFFLKKNRRRNPVAQVLNVFTPQVIPDKKKYKRKDKHAKRYT
Ga0209992_1016766623300024344Deep SubsurfaceLNKKSYAFFLKKNRRRNPIARALNFFTQQIVPDKKKYKRKDKHVKRYT
(restricted) Ga0255049_1002754473300024517SeawaterMNRKHYAFFLKKNRRKNPVAKDLKFFTPQVIEDKTKYRRKDKHVKRTV
Ga0207891_103933823300025044MarineVNKKHYAFFLKKNRRKNPIAKALKFFTPKVIRDKTKYRRKDV
Ga0207902_102291923300025046MarineMNRKHYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYRRKDKHVKRTV
Ga0207897_13254013300025047MarineMNKKHYAFFLKKNRRKNPIAKVLKFFTPQVIEDKTKYRRKDKHVRKR
Ga0207898_104853813300025049MarineVNKKAYAFFRKKNRRKNPIAKVLKFFTPQVIEDKTKYRRKEKHVQTRS
Ga0207906_101329053300025052MarineRLKGEVNRKHYAFFLKKNRRKNPIAKTLKFFTPQVIEDKTKYRRKDKHVKRTI
Ga0208011_105962133300025096MarineMNKKSYSFFLKKNRRRNPIAQILNVFTPQVIPDKKKFKRKDKHVKRYT
Ga0208011_111901613300025096MarineLNKKHYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYTRKEKHVHKNWKNN
Ga0208434_106728723300025098MarineMNKKSYAFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHAKRYT
Ga0209644_101758953300025125MarineMNKKAYAFFLKKNRRKNPIAKALKFFTPKVIQDKKKYNRKRDDQN
Ga0209644_107832123300025125MarineVDEMNKKHYAFFLKKNRRKNPVAKALKFFTPKVIRDKTKYRR
Ga0209644_110683133300025125MarineKHYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYRRKDKHVKRTI
Ga0208919_109152913300025128MarineLNKKLYAYFLKKNRRKNPVAKILKFFTPTVIKDKKKYTRKEKHGRKIFERI
Ga0208919_125064533300025128MarineLNKKAYAYFLKKNRRKNPVARVLKFFTPTVIKDKKKYTRKEKHGQQDWKNS
Ga0209128_104516713300025131MarineKAYAYFLKKNRRKNPVARVLKFFTPTVIKDKKKYTRKEKHGQQDWKNS
Ga0209128_112013333300025131MarineVSMNKKSYSFFLKKNRRRNPIAQILNVFTPQVIPDKKKYKRKDKHVKRYT
Ga0209232_102781863300025132MarineLNKKSYAFFLKKNRRRNPIAQVLNFFTPQVIPDKKKYKRKDKHVKRYT
Ga0209756_104312663300025141MarineMNKKHYAFFLKKNRRPKKHNPIAQLLNVFTPQVIPDKKKYKRKDKHVKRYT
Ga0209756_109903033300025141MarineMNKKSYAFFLKKNRPRNPIARALNFFTQQIVPDKKKYKRKDKHVKRYT
Ga0209756_111953753300025141MarineLNKKAYAFFLKKRRKKSNPIAQILKFFTPQVIKDKTKYRRKE
Ga0209756_133868933300025141MarineLNKKSYAFFLKKNRRKNPIAKALKFFTPKVVPDKKKYDRKKT
Ga0209645_120054313300025151MarineLNKKSYSFFLKKNRRKNPIANALKTFTQKIVPDKKKYDRKKI
Ga0209645_123146713300025151MarineMNKKAYAFFLKKNRRKNPIANALKTFTQKIVPDKKKYDRKKI
Ga0207883_103580613300025216Deep OceanMDKKAYAFFKKKNRKKNPIAKALKFFTPQVIEDKTKYRRKEKHVRTR
Ga0208029_104185023300025264Deep OceanMNKKAYAFFLKKNRKRNPIAQVLKFFTPKRIPNKKKYDRKKSTQILRRDRSG
Ga0208179_108953113300025267Deep OceanMNKKTYAFFLKKNRRKNPIAKALKFFTPKVIQDKKKYNRKRDDQD
Ga0208813_103232863300025270Deep OceanMNRKHYAFFLKKNRRKNPVAKDLKFFTPQVIEDKTKYRRKDK
Ga0209757_1011493533300025873MarineVDEMNKKAYAFFLKKNRKKNPIAKALKFFTPQVIEDKTKYRRKDKHVKRTV
Ga0209089_1059240123300027838MarineMNKKAYAFFLKKNRKKNPIAKVLKFFTPQVIEDKTKYRRKDKHVKQPI
Ga0209404_1110683613300027906MarineMNKKAYAFFLKKNRRKNPIANALKTFTQKIVPDKKKYDRK
Ga0256381_104045713300028018SeawaterNRRKNPVAKVLKFFTPTVIKDKKKYTRKEKHGQQNWKNS
Ga0256381_104252933300028018SeawaterLNKKLYAYFLKKNRRKNPVAKVLKFFTPTVIKDKKKYTRKEKHGQQNWKNS
Ga0256382_1001802113300028022SeawaterMNRKHYAFFLKKNRKKNPIAKDLKFFTPQVIQDKTKYRRKEKHVKRSI
Ga0257109_124056713300028487MarineVNKKHYAFFLKKNRRRKRSNPIAQVLKFFTPKTIPNKKKY
Ga0302120_1027922933300031701MarineMHKKSYAFFLKKNRRTNPIAKVLKFFTPQRIPNKKKYDRKKNK
Ga0310123_1069894413300031802MarineMNRKHYASFLKKNRRKNPIAKALKFFTPQVVEDKTKYNRKTDDQ
Ga0310120_1066749333300031803MarineMNKKAYAFFLKKNRKKNPIAKVLKFFTPQVIEDKTKYRRKNKHVKR
Ga0310344_1033078353300032006SeawaterMNKKAYAFFLKKNRRRNPVAQVLKFFTPQIIKDKKKYKRKE
Ga0310344_1058131933300032006SeawaterMNKKAYAFFLKKNRRRNPIAQVLNVFTPQVIPDKKKYKRKDKHVKRYT
Ga0315334_1063133313300032360SeawaterVNKKHYAFFLKKNRRRKRSNPIAQALKFFTPKTIPNKKKY
Ga0310342_10100481413300032820SeawaterVNKKHYAFFLKKNRRPKHSNPIAQALKFFTPKVIKNKKK
Ga0310342_10198581143300032820SeawaterMNKKHYAFFLKKNRKKPKGSNPIAQVLKFFTPKVIRNKKRYDRKKSS
Ga0314858_065169_209_3613300033742Sea-Ice BrineMHKKNYAFFLKKNRRTNPIAKVLKFFTPQRIPNKKKYDRKKNKQEILISN
Ga0326756_031969_491_6343300034629Filtered SeawaterNRKHYAFFLKKNRKKNPIAKVLKFFTPQVIEDKTKYRRKAKHVKQTI
Ga0326741_037756_666_8183300034654Filtered SeawaterMDRTKYTFFLKKNRRRNPIAKALEFFIPKIIQDKTKYTRKLKHKTRIPSQ


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