Metagenome / Metatranscriptome Family F089027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	65 residues
Representative Sequence	LITVTQDAINQMNSILEKKEDEIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVV
Number of Associated Samples	72
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	44.44 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	92.66 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.303 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (16.514 % of family members)
Environment Ontology (ENVO)	Unclassified (80.734 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (56.881 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.48% β-sheet: 21.74% Coil/Unstructured: 59.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00471	Ribosomal_L33	22.94
PF01521	Fe-S_biosyn	15.60
PF00462	Glutaredoxin	6.42
PF00406	ADK	5.50
PF00565	SNase	5.50
PF01541	GIY-YIG	4.59
PF13365	Trypsin_2	1.83
PF13180	PDZ_2	0.92
PF05226	CHASE2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	22.94
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	15.60
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	15.60
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	5.50
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
All Organisms	root	All Organisms	36.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Viruses	superkingdom	All Organisms → Viruses	18.35 %
cellular organisms	root	All Organisms → cellular organisms	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.51 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	8.26 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	8.26 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	8.26 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.83 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	8.26 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	8.26 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
unclassified Nitrospinaceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae	8.26 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.35 %
Nitrospinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	8.26 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000212\|SI47jul10_120mDRAFT_c1012614	All Organisms → Viruses → Predicted Viral	2271	Open in IMG/M
3300000225\|SI34jun09_120mDRAFT_1051884	Not Available	782	Open in IMG/M
3300001739\|JGI24658J20074_1002171	All Organisms → Viruses → Predicted Viral	3636	Open in IMG/M
3300001781\|Deep_1016764	All Organisms → Viruses → Predicted Viral	2061	Open in IMG/M
3300002231\|KVRMV2_100492479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2576	Open in IMG/M
3300003495\|JGI26244J51143_1039996	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300003498\|JGI26239J51126_1014938	All Organisms → Viruses → Predicted Viral	1954	Open in IMG/M
3300003542\|FS900DNA_10280733	Not Available	581	Open in IMG/M
3300003542\|FS900DNA_10528463	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	544	Open in IMG/M
3300004109\|Ga0008650_1071070	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300006013\|Ga0066382_10279270	Not Available	575	Open in IMG/M
3300006076\|Ga0081592_1111350	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300006076\|Ga0081592_1151007	Not Available	828	Open in IMG/M
3300006076\|Ga0081592_1174678	Not Available	730	Open in IMG/M
3300006076\|Ga0081592_1181513	Not Available	705	Open in IMG/M
3300006324\|Ga0068476_1012765	Not Available	663	Open in IMG/M
3300006336\|Ga0068502_1288313	Not Available	511	Open in IMG/M
3300006339\|Ga0068481_1334013	Not Available	531	Open in IMG/M
3300006340\|Ga0068503_10380957	Not Available	574	Open in IMG/M
3300006414\|Ga0099957_1067046	Not Available	532	Open in IMG/M
3300006414\|Ga0099957_1199862	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006421\|Ga0082247_10654629	Not Available	541	Open in IMG/M
3300006567\|Ga0099958_1052558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	712	Open in IMG/M
3300006841\|Ga0068489_115070	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300008216\|Ga0114898_1012958	All Organisms → Viruses → Predicted Viral	3106	Open in IMG/M
3300009173\|Ga0114996_10258203	All Organisms → Viruses → Predicted Viral	1378	Open in IMG/M
3300009409\|Ga0114993_10501329	Not Available	902	Open in IMG/M
3300009412\|Ga0114903_1040292	Not Available	1122	Open in IMG/M
3300009481\|Ga0114932_10613008	Not Available	636	Open in IMG/M
3300009595\|Ga0105214_108028	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	703	Open in IMG/M
3300009595\|Ga0105214_111643	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	632	Open in IMG/M
3300009619\|Ga0105236_1022098	Not Available	745	Open in IMG/M
3300009791\|Ga0105235_118929	Not Available	747	Open in IMG/M
3300009791\|Ga0105235_134208	Not Available	530	Open in IMG/M
3300010934\|Ga0137844_1069271	Not Available	702	Open in IMG/M
3300011013\|Ga0114934_10538415	Not Available	515	Open in IMG/M
3300017775\|Ga0181432_1086552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	921	Open in IMG/M
3300017775\|Ga0181432_1099998	Not Available	863	Open in IMG/M
3300017775\|Ga0181432_1175691	Not Available	666	Open in IMG/M
3300017775\|Ga0181432_1177126	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	663	Open in IMG/M
3300020389\|Ga0211680_10101636	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300020447\|Ga0211691_10251338	Not Available	691	Open in IMG/M
3300021442\|Ga0206685_10093723	Not Available	988	Open in IMG/M
3300021442\|Ga0206685_10198665	Not Available	674	Open in IMG/M
3300021791\|Ga0226832_10028147	All Organisms → Viruses → Predicted Viral	1871	Open in IMG/M
3300021791\|Ga0226832_10117016	Not Available	988	Open in IMG/M
3300021791\|Ga0226832_10119205	Not Available	979	Open in IMG/M
3300021791\|Ga0226832_10157958	Not Available	865	Open in IMG/M
3300021791\|Ga0226832_10198933	Not Available	782	Open in IMG/M
3300021791\|Ga0226832_10224540	Not Available	742	Open in IMG/M
3300021978\|Ga0232646_1033974	All Organisms → Viruses → Predicted Viral	1837	Open in IMG/M
3300021979\|Ga0232641_1092135	All Organisms → Viruses → Predicted Viral	1155	Open in IMG/M
3300023481\|Ga0257022_1089157	Not Available	507	Open in IMG/M
3300025044\|Ga0207891_1043518	Not Available	529	Open in IMG/M
3300025128\|Ga0208919_1045886	All Organisms → Viruses → Predicted Viral	1516	Open in IMG/M
3300025218\|Ga0207882_1031101	Not Available	766	Open in IMG/M
3300025218\|Ga0207882_1047663	Not Available	595	Open in IMG/M
3300025241\|Ga0207893_1010987	All Organisms → Viruses → Predicted Viral	1230	Open in IMG/M
3300025241\|Ga0207893_1052371	Not Available	586	Open in IMG/M
3300025247\|Ga0207880_1015468	All Organisms → Viruses → Predicted Viral	1251	Open in IMG/M
3300025257\|Ga0207899_1055847	Not Available	611	Open in IMG/M
3300025259\|Ga0207876_1037077	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	668	Open in IMG/M
3300025260\|Ga0207895_1046083	Not Available	727	Open in IMG/M
3300025260\|Ga0207895_1061388	Not Available	613	Open in IMG/M
3300025267\|Ga0208179_1011331	Not Available	2836	Open in IMG/M
3300025267\|Ga0208179_1064650	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	786	Open in IMG/M
3300025277\|Ga0208180_1044203	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300025278\|Ga0207417_1058943	Not Available	599	Open in IMG/M
3300025287\|Ga0207903_1039670	Not Available	858	Open in IMG/M
3300025301\|Ga0208450_1088777	Not Available	690	Open in IMG/M
3300026101\|Ga0208817_110089	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	1020	Open in IMG/M
3300026119\|Ga0207966_1120150	Not Available	601	Open in IMG/M
3300027572\|Ga0208964_1117832	Not Available	571	Open in IMG/M
3300028022\|Ga0256382_1045138	Not Available	1016	Open in IMG/M
3300028022\|Ga0256382_1049156	Not Available	979	Open in IMG/M
3300028039\|Ga0256380_1006386	Not Available	1812	Open in IMG/M
3300028488\|Ga0257113_1074653	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300028489\|Ga0257112_10121568	Not Available	941	Open in IMG/M
3300031775\|Ga0315326_10105958	All Organisms → Viruses → Predicted Viral	1830	Open in IMG/M
3300031800\|Ga0310122_10016826	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	4323	Open in IMG/M
3300031800\|Ga0310122_10351738	Not Available	638	Open in IMG/M
3300031800\|Ga0310122_10360152	Not Available	628	Open in IMG/M
3300031801\|Ga0310121_10525327	Not Available	652	Open in IMG/M
3300031801\|Ga0310121_10544612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	636	Open in IMG/M
3300031801\|Ga0310121_10577761	Not Available	612	Open in IMG/M
3300031804\|Ga0310124_10126909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1580	Open in IMG/M
3300032032\|Ga0315327_10705465	Not Available	617	Open in IMG/M
3300032127\|Ga0315305_1158563	Not Available	599	Open in IMG/M
3300032130\|Ga0315333_10050188	All Organisms → cellular organisms → Eukaryota	1865	Open in IMG/M
3300032145\|Ga0315304_1095425	Not Available	787	Open in IMG/M
3300032145\|Ga0315304_1210172	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	510	Open in IMG/M
3300032278\|Ga0310345_10916173	Not Available	855	Open in IMG/M
3300032278\|Ga0310345_11561847	Not Available	645	Open in IMG/M
3300032820\|Ga0310342_100248537	All Organisms → Viruses → Predicted Viral	1843	Open in IMG/M
3300032820\|Ga0310342_100939861	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300032820\|Ga0310342_100977517	Not Available	991	Open in IMG/M
3300034628\|Ga0326755_028298	Not Available	565	Open in IMG/M
3300034629\|Ga0326756_019740	Not Available	787	Open in IMG/M
3300034629\|Ga0326756_034741	Not Available	612	Open in IMG/M
3300034629\|Ga0326756_035971	Not Available	602	Open in IMG/M
3300034654\|Ga0326741_017379	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	1290	Open in IMG/M
3300034654\|Ga0326741_049555	Not Available	712	Open in IMG/M
3300034654\|Ga0326741_049636	Not Available	711	Open in IMG/M
3300034654\|Ga0326741_071220	Not Available	576	Open in IMG/M
3300034654\|Ga0326741_086299	Not Available	515	Open in IMG/M
3300034656\|Ga0326748_005001	All Organisms → Viruses → Predicted Viral	1691	Open in IMG/M
3300034656\|Ga0326748_014171	Not Available	1047	Open in IMG/M
3300034656\|Ga0326748_049763	Not Available	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.08%
Unclassified	Environmental → Aquatic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	52.29%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	15.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.84%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.09%
Strait	Environmental → Aquatic → Marine → Strait	3.67%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.75%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.83%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	43.12%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.84%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	11.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	10.09%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.59%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	3.67%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.92%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.92%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.92%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	16.51%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	11.01%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.26%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.26%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	6.42%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	5.50%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	5.50%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.59%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	3.67%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	3.67%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	3.67%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.83%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	1.83%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Sediment	0.92%
Marine	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Marine	0.92%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.92%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.92%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.92%
Subsea Pool Microbial Mat	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool Microbial Mat	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000212	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 120m	Environmental	Open in IMG/M
3300000225	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120m	Environmental	Open in IMG/M
3300001739	Marine viral communities from the Deep Pacific Ocean - MSP-121	Environmental	Open in IMG/M
3300001781	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Sites	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300003495	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA	Environmental	Open in IMG/M
3300003498	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA	Environmental	Open in IMG/M
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental	Open in IMG/M
3300004109	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_150m_DNA	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006421	Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten I	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006841	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_2_0200m	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental	Open in IMG/M
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental	Open in IMG/M
3300010934	Microbial mat microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV9-P3	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020447	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300021979	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS926 _150kmer	Environmental	Open in IMG/M
3300023481	Marine microbial mat from Loihi Seamount, Hawaii, USA - Ku'kulu Base Individual Assembly	Environmental	Open in IMG/M
3300025044	Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025218	Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)	Environmental	Open in IMG/M
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025259	Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)	Environmental	Open in IMG/M
3300025260	Marine viral communities from the Deep Pacific Ocean - MSP112 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025278	Marine viral communities from the Deep Pacific Ocean - MSP-82 (SPAdes)	Environmental	Open in IMG/M
3300025287	Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300026101	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500 (SPAdes)	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300027572	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_08_M0_20 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032127	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032145	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034628	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034656	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SI47jul10_120mDRAFT_10126147	3300000212	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPLSEGRFVID
SI34jun09_120mDRAFT_10518841	3300000225	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPLSEGRFVIDEFTADF
JGI24658J20074_10021718	3300001739	Deep Ocean	LITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTWDLAHGKFVVDEGHDLVHRWWGSQL*
Deep_10167648	3300001781	Hydrothermal Vent Plume	MINVLPDAINQMNSILEKKGDAVVRYELKGGGCGGLIAEWKTEPHYEPEQGEKTWELTQGKFVVDEYTADFIDGGTVNYDLT
KVRMV2_1004924797	3300002231	Marine Sediment	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPL
JGI26244J51143_10399961	3300003495	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQG
JGI26239J51126_10149381	3300003498	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWP
FS900DNA_102807333	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	LITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTWDLA
FS900DNA_105284632	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MINVLPDAINQMNSIHEKKGDAVVRYELKAGGCGGLISRWDTEPHHEPEQGEQVWPLAQGKFVVDES
Ga0008650_10710703	3300004109	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPLSE
Ga0066382_102792701	3300006013	Marine	MINVLPDAITQMNAILERKGDTVVRYELKGGGCGGLIASWDTEPHHEPEQGEQVWPLAQGKFVVDESTAEFIDGGTVNYDL
Ga0081592_11113504	3300006076	Diffuse Hydrothermal Fluids	LITVTQDAINQMNSILKEKEDAVVRYELRGGGCGGLVAEWKTEPHHEPEKGEMTWDLDRGKFVVDKAT
Ga0081592_11510074	3300006076	Diffuse Hydrothermal Fluids	LITVTQDAINQMNSILERKEDAVVRYELRGGGCGGLVAEWKTEPHHEPEKGEMTWDLDRGKFVVDKAT
Ga0081592_11746781	3300006076	Diffuse Hydrothermal Fluids	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHKPEQGEGLWPLANGVF
Ga0081592_11815133	3300006076	Diffuse Hydrothermal Fluids	VRRLRRCRTLITVTQDAINQMNSILEKKEDTVVRYELRGGGCGGLIAEWKTEPHHEPEQGEMT
Ga0068476_10127653	3300006324	Marine	MSIEVTQDAINQMNSILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGERTWPLSNGVFVMDEFTKDFIE
Ga0068502_12883132	3300006336	Marine	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGERTWPLANGLFVMDEFTKDFIEG
Ga0068481_13340131	3300006339	Marine	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLTNGVFVMDEFTKDFIQGGTVNYDLTNF
Ga0068503_103809571	3300006340	Marine	LITVTQDAVNQMNSILERKGDAVVRYELKGGGCGGLIAAWETEPHHEPEQGEQTWPLANGKFVVDEGTADFIDGGTV
Ga0068493_106402231	3300006341	Marine	MIEVTQDAINQMNHILEKNGEAVVRYELKAGGCGGIIAEW
Ga0099957_10670461	3300006414	Marine	MQTILERKGDAVVRYELKGGGCGGLIASWDTEPHHEPEQGEQTWLLSNGKFVVDEGTADFIDGGT
Ga0099957_11998624	3300006414	Marine	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHKPSQGEQTW
Ga0082247_106546291	3300006421	Sediment	LITVTQDAINQMNSILEKKEDEIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVV
Ga0099958_10525583	3300006567	Marine	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLANGLFVMDEFT*
Ga0068489_1150705	3300006841	Marine	MSIEVTQDAINQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGEQT
Ga0114898_10129581	3300008216	Deep Ocean	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLANGLFVMDEFTKDFI
Ga0114996_102582034	3300009173	Marine	MIEVTQDAINQMNSILEKNGDVAVRYELKGGGCGGLLADWKTEPHHEPEQGEQVWPLAQGVFVIDGFTKE
Ga0114993_105013292	3300009409	Marine	MIEVTQDAINQMNSILEKNGDVAVRYELKGGGCGGLLADWKTEPHHEPEQGEQV
Ga0114903_10402921	3300009412	Deep Ocean	MNSILERKEDAVVRYELRGGGCGGLIAEWKTEPHHEPEQGEMIWDLTHGKFVV
Ga0114932_106130081	3300009481	Deep Subsurface	MIEVTQDAINQMNNILSKNGDAVVRYELKGGGCGGLLAEWKSEPHHEPEPDEQVWTLEHGAFVIDGFTKDFIDGGVVNY
Ga0105214_1080281	3300009595	Marine Oceanic	MNSILERKEDAVVRYELRGGGCGGLVAEWKTEPHHKPEQGEMTWDLTHGKFVVDEATTSFIDGGIVNYD
Ga0105214_1116432	3300009595	Marine Oceanic	MNSILEKKEDAIVRYELRGGGCGGLIAEWKTELRHEPEQGEMSWDLAQGKFVVDKATTSFIDGGVVN
Ga0105236_10220984	3300009619	Marine Oceanic	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHKPEQGEQ
Ga0105235_1189292	3300009791	Marine Oceanic	MNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTWDLAHGKFVVDEATTSFIDGGVVNYDISNFMPNFIVSVPD
Ga0105235_1342081	3300009791	Marine Oceanic	MNSILEKKEDAIVRYELRGGGCGGLIAEWKTELRHEPEQGEMTWDLAQGKFVVD
Ga0137844_10692711	3300010934	Subsea Pool Microbial Mat	MSIEVTQDAINQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGEQTWP*
Ga0114934_105384153	3300011013	Deep Subsurface	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPLSEGRFVIDEFTADFIDGGIVNYDL
Ga0181432_10865521	3300017775	Seawater	VWGLRGCRTLITVTQDAINQMNSILEKKGDEVVRYELRGGGCGGLIADWKTEPHHKPEKGEMTWGL
Ga0181432_10999981	3300017775	Seawater	MIEVTQDAINQMNHILEKNGEAVVRYELKAGGCGGIIAEWGTEPHHEPEQGEKVW
Ga0181432_11756912	3300017775	Seawater	MIEVTQDAINQMNHILEKNGEAVVRYELKAGGCGGIIAEWGTEPHHEPEQ
Ga0181432_11771263	3300017775	Seawater	MITVTADAISQMNSILERKGDAVVRYELKGGGCGGLIASWETESHYEPEQGEQTWPLANGKFVV
Ga0211680_101016361	3300020389	Marine	MIEVTQDAVNQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHYEPEQGEITWPL
Ga0211691_102513383	3300020447	Marine	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPTQGEQTWPLANGLFVMDEYTKDFIDG
Ga0206685_100937235	3300021442	Seawater	MSIEVTQDAINQMNHILEKNGDAAVRYELKGGGCGGIIAEWKSEPHHEPNAGEQTWPLANGIFVM
Ga0206685_101986653	3300021442	Seawater	MNSILERKGDAVVRYELKGGGCGGLIASWETEPHYEPEQGEQTWPLANGKFVVDEATADFIDGGIVNYDLS
Ga0226832_100281471	3300021791	Hydrothermal Vent Fluids	MSIEVTQDAINQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGEQTWPLAHGKFVIDEFTKDFI
Ga0226832_101170161	3300021791	Hydrothermal Vent Fluids	MSIEVTQDAINQMNSILEKNGDAAVRYELKAGGCGGIIAEWGTEPHYEPEQGEQVWPL
Ga0226832_101192056	3300021791	Hydrothermal Vent Fluids	LIEVTQDAINQMNSILERKGDTVVRYELKGGGCGGLIADWKTEPHYEPEQGEQTWTLSQG
Ga0226832_101579582	3300021791	Hydrothermal Vent Fluids	LITVTQDAINQMNSILQKKEDTVVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVVDKATTSFIDGGVVNYDLSNFMP
Ga0226832_101989335	3300021791	Hydrothermal Vent Fluids	MIEVTQDAINQMNHILEKNGESVVRYELKAGGCGGIIAEWGTEPQHK
Ga0226832_102245403	3300021791	Hydrothermal Vent Fluids	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGEQTWPLSEGRFVIDEFTADFI
Ga0232646_10339741	3300021978	Hydrothermal Vent Fluids	MNSILEKKPDTVVRYELKGGGCGGLIAKWDTELHHEPEQGEQTWSLANGKFVVDESTAEFIDGGTVNYDLT
Ga0232641_10921354	3300021979	Hydrothermal Vent Fluids	MINVLPDAISQMNKILERKGDTVVRYELKGGGCGGLIASWDTEPHHEPEQGEQVWPLAQGKFVVDESTAEFIDGGTVNYD
Ga0257022_10891571	3300023481	Marine	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLTH
Ga0207891_10435182	3300025044	Marine	VRRLRGCRALITVTQDAINQMNSILERKEDAIVRYELRGGGCGGLIAEWKTELRHEPEQG
Ga0208919_10458861	3300025128	Marine	MSIEVTQDAINQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGEQTWPL
Ga0207882_10311013	3300025218	Deep Ocean	LITVTQDAINQMNSILEKKEDTIVRYELRGGGCGGLIAEWKTEQRHEPEQGEMTWDLDRGKFVVDEAT
Ga0207882_10476631	3300025218	Deep Ocean	LITVTQDAINQMNSILEKKEDTIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAQGKFVVDKATTSFIDGG
Ga0207893_10109874	3300025241	Deep Ocean	LITVTPDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHEPEQG
Ga0207893_10523711	3300025241	Deep Ocean	LITVTQDAINQMNSILEKKEDEIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVVDEA
Ga0207880_10154681	3300025247	Deep Ocean	LITVTQDAINQMNSILEKKEDTIVRYELRGGGCGGLIAEWKTEPHHE
Ga0207899_10558471	3300025257	Deep Ocean	LITVTQDAINQMNSILEKKEDEIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTW
Ga0207876_10370771	3300025259	Deep Ocean	LITVTQDAINQMNSILEEKEDTIVRYELRGGGCGGLIAEWKTEPRHEPEQGEMTWDLAQGKFVVDKATTSFIDGGVVNYDVS
Ga0207895_10460831	3300025260	Deep Ocean	LITVTQDAINQMNSILDKKEDTIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMT
Ga0207895_10613881	3300025260	Deep Ocean	LITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEQRHEPEQGEMTWDLAHG
Ga0208179_10113311	3300025267	Deep Ocean	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLANGLFVMDEFTKDFIEGGTVNYDL
Ga0208179_10646501	3300025267	Deep Ocean	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWDSEPHYEPEQGDKTWPLANGKFVMDE
Ga0208180_10442031	3300025277	Deep Ocean	LITVTQDAINQMNSILERKEDAVVRYELRGGGCGGLIAEWKTEPHHEPE
Ga0207417_10589432	3300025278	Deep Ocean	LITVTQDALNQMNSILEKKEDTIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTWDLAHGKFVVDEATTSFIDGGIVNYDISNFMP
Ga0207903_10396701	3300025287	Deep Ocean	LITVTQDAINQMNFILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHKPEQGEMTWDLAHGKFVVDEATTSFID
Ga0208450_10887771	3300025301	Deep Ocean	VRWLWGSRILITVTQDAINQMNSILKKKEDEVVRYELRGGGCGGLIAEWKTESHHEPEQGEMTWDLDHGKFVVDKATTSFIDGGV
Ga0208817_1100891	3300026101	Marine Oceanic	VRRVRRCRILITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPYHEPEQGEMTWDLAHGKFVVDKATTSFIDGGVVNYD
Ga0207966_11201501	3300026119	Marine	MIEVTQDAINQMNSILEKKPDTVVRYELKGGGCGGLIAKWDTELHHEPEQGEQT
Ga0208964_11178321	3300027572	Marine	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELTWPLSEGRFVIDEFTADFIDGGIVNYDLTN
Ga0256382_10451381	3300028022	Seawater	LITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPNHEPEPGEMTWDLAHGKFVVD
Ga0256382_10491561	3300028022	Seawater	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEMTWPLANGLFVMDEFTKDFIDGP
Ga0256380_10063861	3300028039	Seawater	VRWLWRSRILITVTQDAINQMNSILKQKEDAVVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWELTHGKFVVDKATTSFIDG
Ga0257113_10746531	3300028488	Marine	MIEVTQDAINQMNHILDKNGDSAVRYELKAGGCGGIIAEWGTEPHHEPELGEMTWPLANGLFVM
Ga0257112_101215685	3300028489	Marine	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTESHHEPEQGEQTWPLANGLFVMDEYTK
Ga0315326_101059581	3300031775	Seawater	MSITVTDDAIRQMNSILERKGDAAVRYELKGGGCGGLIAEWKTEPHYEPEQGELSWPLSEGRFVIDEFTADFIDG
Ga0310122_100168261	3300031800	Marine	MNSILESKEDAVVRYELKGGGCGGLIAKWDTELHHEPEQGEQTWPLANGKFVVDEST
Ga0310122_103517381	3300031800	Marine	MINVLPDAINQMNRILEKKGDAVVRYELKGGGCGGLIAKWDTEPHHEPEQGEQTWEL
Ga0310122_103601523	3300031800	Marine	LITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEQRHEPEQGEMTWDLA
Ga0310121_105253271	3300031801	Marine	LITVTQDAINQMNSILEKKEDTIVRYELRGGGCGGLIAEWKTEPNHEPESGEMTWDLANGKFVVDKATTSFIDGGVVNYDLSNFM
Ga0310121_105446124	3300031801	Marine	MIEVTQDAINQMNHILKKNGDAAVRYELKAGGCGGIIAEWGTEKDHEPEVGEMIWPLANGLFVMDEYTKDFIDGG
Ga0310121_105777611	3300031801	Marine	LITVTQDAINQMNSILEKKEDSIVRYELRGGGCGGLIAEWKTEPRHEPE
Ga0310124_101269091	3300031804	Marine	MIEVTQDAINQMNHILKKNGDAAVRYELKAGGCGGIIAEWGTEKDHEPEVGEMIWPLANGLFVMDEYTKDFIDGGVVNYD
Ga0315327_107054652	3300032032	Seawater	MIEVTQDAINQMNSILEKNGDAAVRYELKGGGCGGLLADWKSEPHYEPE
Ga0315305_11585632	3300032127	Marine	LITVTQDAMDQMNSILEKKGDEIVRYELRGGGCGGLIAEWKTEPHHKPEQGEITWGLASGKFVIDE
Ga0315333_100501889	3300032130	Seawater	MSIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLTNGVFVMDEFT
Ga0315304_10954251	3300032145	Marine	LITVTDDAIAQMNAILEKKGDAVVRYELKGGGCGGLIASWDTEPHYEP
Ga0315304_12101721	3300032145	Marine	VRRLRRCGALITVTQDAINQMDSILEKKEDVIVRYELRGGGCGGLIAEWKTEPRHEPEPGEMTWDLDHGKFVVDEATTSFIDGGVVNYDLSNFM
Ga0310345_109161733	3300032278	Seawater	MIEVTQDAINQMNSILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPLANGLFVMDEYTKDFIDG
Ga0310345_115618474	3300032278	Seawater	MSIEVTQDAINQMNSILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPTQGEQVWS
Ga0310342_1002485371	3300032820	Seawater	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTWPL
Ga0310342_1009398611	3300032820	Seawater	MSIEVTQDAINQMNSILERKGDAVVRYELRGGGCGGLIADWKTEPHHEPEQGEE
Ga0310342_1009775171	3300032820	Seawater	MIEVTQDAINQMNHILEKNGDAAVRYELKAGGCGGIIAEWGTEPHHEPEQGEQTW
Ga0326755_028298_3_173	3300034628	Filtered Seawater	MITVTQDAINQMNSILEKKEDEIVRYELRGGGCGGLIAEWKTESHHEPEQGEMTWDL
Ga0326756_019740_596_787	3300034629	Filtered Seawater	MITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPRHEPEQGEMTWDLAHGKFVV
Ga0326756_034741_371_610	3300034629	Filtered Seawater	MNSILKEKEDAVVRYELRGGGCGGLVAEWKTEPHHEPEQGEMTWDLTHGKFVVDKATTSFIDGGVVNYDLSNFMPNFIVS
Ga0326756_035971_1_159	3300034629	Filtered Seawater	MITVTQDAINQMNSILDKKEDEIVRYELRGGGCGGLIAEWKTEPHHKPEQGEM
Ga0326741_017379_1043_1288	3300034654	Filtered Seawater	MDSILEKKEDAIVRYELRGGGCGGLISEWKTEPRHEPEQGEMTWDLAHGKFVVDEATTSFIDGGVVNYDLSNFMPNFIVSVP
Ga0326741_049555_482_712	3300034654	Filtered Seawater	MNSILEKKEDTIVRYELRGGGCGGLIAEWKTEPRHEPEQGEMTWDLAQGKFVVDKATTSFIDGGIVNYDVSNFMPNF
Ga0326741_049636_515_709	3300034654	Filtered Seawater	MNFILEKKEDAIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVVDEATTSFIDGGV
Ga0326741_071220_369_575	3300034654	Filtered Seawater	MNSILEKKEDEIVRYELRGGGCGGLIAEWKTEPHHEPEQGEMTWDLAHGKFVVDKATTSFIDGGVVNYD
Ga0326741_086299_374_514	3300034654	Filtered Seawater	MITVTQDAINQMNSILEKKEDAIVRYELRGGGCGGLIAEWKTEPRHE
Ga0326748_005001_1544_1690	3300034656	Filtered Seawater	MITVTQDAINQMNSILEKEEDAIVRYELRGGGCGGLIAEWKTEPHHKPE
Ga0326748_014171_1_174	3300034656	Filtered Seawater	MITVTQDAINQMNSILKKKEDAIVRYELRGGGCGGLIAEWKTEPCHKPEQGEMIWDLD
Ga0326748_049763_2_199	3300034656	Filtered Seawater	MITVTQDAINQMNSILERKEDTIVRYELRGGGCGGLIAEWKTEPRHEPEQGEMTWDLAQGKFVVDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences