Metagenome / Metatranscriptome Family F089170

Basic Information
Family ID	F089170
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	90 residues
Representative Sequence	MIGHMRVDGQFQISLERGGMRSATALPLTARDVAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP
Number of Associated Samples	90
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.09 %
% of genes near scaffold ends (potentially truncated)	6.42 %
% of genes from short scaffolds (< 2000 bps)	10.09 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (97.248 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (44.037 % of family members)
Environment Ontology (ENVO)	Unclassified (37.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.119 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 16.07% Coil/Unstructured: 58.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01068	DNA_ligase_A_M	3.67
PF13545	HTH_Crp_2	0.92
PF00149	Metallophos	0.92
PF04909	Amidohydro_2	0.92
PF03466	LysR_substrate	0.92
PF00589	Phage_integrase	0.92
PF05974	DUF892	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.67
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.67
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
All Organisms	root	All Organisms	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
cellular organisms	root	All Organisms → cellular organisms	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.25 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.75 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005843\|Ga0068860_100690464	Not Available	1030	Open in IMG/M
3300011119\|Ga0105246_10157775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1725	Open in IMG/M
3300012212\|Ga0150985_104416673	Not Available	1235	Open in IMG/M
3300012986\|Ga0164304_10141825	Not Available	1501	Open in IMG/M
3300021510\|Ga0222621_1112206	Not Available	579	Open in IMG/M
3300026118\|Ga0207675_101180669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	785	Open in IMG/M
3300028718\|Ga0307307_10097332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	895	Open in IMG/M
3300028768\|Ga0307280_10064966	Not Available	1164	Open in IMG/M
3300028768\|Ga0307280_10267555	Not Available	618	Open in IMG/M
3300030986\|Ga0308154_110134	Not Available	612	Open in IMG/M
3300031096\|Ga0308193_1032918	Not Available	722	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.97%
Host-Associated	Host-Associated	33.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.55%
Plants	Host-Associated → Plants	33.03%
Aquatic	Environmental → Aquatic	6.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.68%
Sediment	Environmental → Aquatic → Sediment	6.42%
Roots	Host-Associated → Plants → Roots	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.42%
Loam	Environmental → Terrestrial → Soil → Loam	1.83%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	44.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063455_1016194891	3300004153	Soil	MNGNGTRHDIPNQPTMIARKRADGQFQISLECGGMRRATALPLADRDITHLALEAAVRNLGMTQLLTDIVITAIKKDMIEEILREPCLDPAPQSVPESP*
Ga0070683_1024206772	3300005329	Corn Rhizosphere	VLNGDASHPPIVGHMRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPS
Ga0070670_1008631612	3300005331	Switchgrass Rhizosphere	MRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP*
Ga0070662_1019371751	3300005457	Corn Rhizosphere	RLGISLRRRHVLNGNASHPPIIGHMRVDGQFQISLECGGMRRATALPLTAGDVAQLALAAAVRNVGMTQLLSEVVATAIKKGMIEEILREPSPDPAPQAVPESP*
Ga0068860_1006904644	3300005843	Switchgrass Rhizosphere	RRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0068862_1012946082	3300005844	Switchgrass Rhizosphere	MIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTMAIKNGMIEEILREPSPDRAP*
Ga0075365_101810841	3300006038	Populus Endosphere	VLNGDASHPPIVGHMRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILR
Ga0075362_104408722	3300006177	Populus Endosphere	VLNGDASHPPIVGHMRVDGQFQISIECAGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP*
Ga0074050_114549012	3300006577	Soil	SHPPMIGHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTAAIQKDMIEEILREPSPDLAPQAVPESP*
Ga0074049_130677491	3300006580	Soil	VLNGNACDSRVMSGNGTRHDIPNHPPMVGHMRVGAQLQITLERDGVRRATALPLTARDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMIEEILREPSPDPAPQAGPESP*
Ga0074048_132741253	3300006581	Soil	LRTRKYSNGRGSHWEGAVGRPHLANHPPMIGHMRVDAQFQISFERGGTRRATALPLTDRDIAQLALAAAARNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP*
Ga0099795_101042382	3300007788	Vadose Zone Soil	ELQREPFAVMNGNGTRHDIPNQPTMIAGKRADGQFQISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMFKEILREPCPDPAPQAVPESP*
Ga0105245_112006941	3300009098	Miscanthus Rhizosphere	MIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP*
Ga0099792_105477961	3300009143	Vadose Zone Soil	MSGNGTRHDIPNHPPMVGHMRVGAQFQITLERDGVRRATALPLTARDIAQLALEAVVRNVGMTQLLTEVVTTAIKKRMIEEILREPSPDPAPQAVPESP*
Ga0099792_112526621	3300009143	Vadose Zone Soil	HPPMIGHMRVDGQFQISFERGGTRRATALPLTAHHIAQLALAAAARNVGMTQLLTEIVITAIKKDMIEEILREPSPDPAPQAVPESP*
Ga0105243_102256641	3300009148	Miscanthus Rhizosphere	MNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0105248_122576081	3300009177	Switchgrass Rhizosphere	MRVDGQFQIRIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESL*
Ga0105249_119313941	3300009553	Switchgrass Rhizosphere	MRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP*
Ga0105239_107626251	3300010375	Corn Rhizosphere	MRVDGQFQISLEYGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQSVPESP*
Ga0134126_115281521	3300010396	Terrestrial Soil	MIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP*
Ga0134127_110370491	3300010399	Terrestrial Soil	NAGHLRVMNGNGTRHDIPHHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0134122_110992712	3300010400	Terrestrial Soil	MIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTAAIQKDMIEEILREPSPDLAPQAVPESP*
Ga0134121_125059492	3300010401	Terrestrial Soil	GGMRRATALPLTAGDIGQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP*
Ga0105246_101577751	3300011119	Miscanthus Rhizosphere	MRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILRKPSPDPAPQAVPESP*
Ga0105246_123968611	3300011119	Miscanthus Rhizosphere	NGRGSHWEGAVGRPHLANHPPMIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0137399_108133442	3300012203	Vadose Zone Soil	MSGNGARHDIPNHPPMIGHMRVDGQFQISLERGGMRRVTALPLTACDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP*
Ga0150985_1044166733	3300012212	Avena Fatua Rhizosphere	MNGNGTRHDLPNHPTMVARKRANGQFQVTPELNGARLTTDLPLTARDIAQLALEAAVRNVGMTQLLTEVVTTAIRKGMIEEVLREPAQGGSAVPT*
Ga0150985_1150066771	3300012212	Avena Fatua Rhizosphere	MIGHMRVDAQFQISFERGGVRRAFALPLTARDIAQLSLAAAVRNVGMTQLLTEVVTMAIKNGMIEEILREPSPDRAPQAGPESP*
Ga0150985_1220376282	3300012212	Avena Fatua Rhizosphere	MRVDGQFQISLECGGMRRATALPLTAGDIAQLALSAAVRNVGMTQLLTEVVAMAIKKDMIGGILGEQSPDPAPQVVPESP*
Ga0150984_1160417631	3300012469	Avena Fatua Rhizosphere	MNGNGTRHDLPNHPTMVARKRANGQFQVTLELNGARLTTDLPLTARDIAQLALEAAVRNVGMTQLLTEVVTTAIRKGMIEEVLREPAQGGSAVPT*
Ga0150984_1212214421	3300012469	Avena Fatua Rhizosphere	ISLRRQGSFNGCGKSRTRVLIRPDIANHPSMVGHMRVDGQFEISLECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP*
Ga0137413_105848632	3300012924	Vadose Zone Soil	MSGNGTRHDIPNHPPMVGHMRVGAQLQITLERDGVRRATALPLTARDIAQLALEAAVRNVGMTQLLTEIVTTAIKKRMIEEILREPSPDPAPQAVPESP*
Ga0137416_107718932	3300012927	Vadose Zone Soil	MRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEIASTAIKKGMIEEILRPDGKLAAALT*
Ga0164299_111853341	3300012958	Soil	MNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRAIALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCSDPPPQAVPESP*
Ga0164301_104638292	3300012960	Soil	MNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0164301_116342231	3300012960	Soil	MIGHMRVDGQFQISFERGGVLRAFALPFTARDIAQLSLAAAVRNVGMTQLLTEVVTIAIKNGMIEEILREPSPDRAPQAGPESP*
Ga0164302_106464392	3300012961	Soil	RMGISLRRRDVLNCNAGHLRVMNGNGTRNDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP
Ga0164302_116483151	3300012961	Soil	MNGNGTRHDIPNHPTMVARKRADVQFQVTLELNGARRTTDLPLTSRDCAQLALEAAVGNVGMTQLLTEIVITAIKKDMLKEILREPCP
Ga0164304_101418253	3300012986	Soil	MRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEGVATAIKKGLIEEILRKPSPDPAPQAVPESP*
Ga0164306_114989521	3300012988	Soil	MNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALAAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0157378_105107971	3300013297	Miscanthus Rhizosphere	MNGNGTRHDIPNHPTMIARERANGQLQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0157372_113872591	3300013307	Corn Rhizosphere	MNGNGTHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMIKEILREPSPDPAPQAVPESP*
Ga0157380_103157833	3300014326	Switchgrass Rhizosphere	MIGHMRVDAQFQISFERGGVRRAFALPLTARDIAQLSLAAAVRNVGMTQLLTEVVTMAIKNGMIEEILREPSPDLAPQAVPESP*
Ga0132258_102297831	3300015371	Arabidopsis Rhizosphere	SRLGISLRRRDVLNCNASHLRAMNGNGTRHDIPNPPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPVPQAVPESP*
Ga0132256_1018020232	3300015372	Arabidopsis Rhizosphere	MRVDGQFQISIECGGMRRATAVPLTGSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGMIEEILREPSPDPAPQAVPESP*
Ga0132257_1011282121	3300015373	Arabidopsis Rhizosphere	GMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0132257_1014828582	3300015373	Arabidopsis Rhizosphere	MGISLRRRDVLNCNAGHLHVMNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0132255_1015659672	3300015374	Arabidopsis Rhizosphere	GISLRRRDVLNCNASHLRVMNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP*
Ga0190266_105368441	3300017965	Soil	GNGTRHDIPNHPTMIARKRADGQFQISLESGGVRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILRELCPDPAPQSVPESP
Ga0184604_100903432	3300018000	Groundwater Sediment	SLQVTCSRLGISLRKRHVLNCNGSHLRVMNGNGTRHDIPNQPTMIAGKRADGQFQISLESGGMRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVITAIKKDMLKEILREPSPAPAPQAVPESM
Ga0184605_102148933	3300018027	Groundwater Sediment	VLNGSHTRVNGARHAIPIVARKRADAQFQVTLELNGARGATALPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP
Ga0184634_104888121	3300018031	Groundwater Sediment	SHSRVMSGKGTRHDIPSGKGTRHDIPNHPPMIGHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP
Ga0184619_103810991	3300018061	Groundwater Sediment	QISLERGGMRSATALPLTARDVAQLALAAAVRNVGMTQLLTEVVTTAIKKNMIEEILREPSQESAPQAVPESP
Ga0184624_103900801	3300018073	Groundwater Sediment	FQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP
Ga0193719_104591763	3300021344	Soil	GGMRLVTALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPALRAVPESP
Ga0193709_10958662	3300021411	Soil	MIGHMRVDGQFQISLERGGMRRVTALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPALRAVPESP
Ga0222621_11122061	3300021510	Groundwater Sediment	WVGAVGRPHTANHPPMIGDMRVDGQFQICLERGGMRRVTALPLTARDIAQLALAAAVRNVGMTQLLTEIVITAIKKDMIEEILRPDGKLAAALT
Ga0207645_102238302	3300025907	Miscanthus Rhizosphere	GKRADGQFQISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAGPESP
Ga0207650_114872692	3300025925	Switchgrass Rhizosphere	MRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSKVVATAIKKGLIEEILREPSPDPAPQAVPESP
Ga0207704_104100892	3300025938	Miscanthus Rhizosphere	MRVDGQFQISIECGGMRRATAVPLTDSDIAQLALAAAVRNVGMTQLLSEVVATAIKKGLIEEILREPSPDPAPQAVPESP
Ga0207704_108193601	3300025938	Miscanthus Rhizosphere	FERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVSMAIKNGMIEEILREPSPDRAPQAGPESP
Ga0207691_108670891	3300025940	Miscanthus Rhizosphere	VLNGNASHLPIIGHMRVDGQFQISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMIEEILREPSPDRAPQARHRDADRR
Ga0207677_116690712	3300026023	Miscanthus Rhizosphere	ERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP
Ga0207639_114702321	3300026041	Corn Rhizosphere	GHLRVMNGNGTRHDIPNHPTMIARKRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP
Ga0207675_1011806692	3300026118	Switchgrass Rhizosphere	MRVDGQFQISLEYGGMRRATALPLTAGDIGQLALAAAVRNVGMTQLLSEVVATAIKKGMIEEILREPSPDPAPQAVPESP
Ga0207675_1015978681	3300026118	Switchgrass Rhizosphere	ADGQFQISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP
Ga0209069_106483902	3300027915	Watersheds	MIGHMRVDGQFQISLECGGMRRETALPLTAGDIAQLALAAAVRNVGMTQLLTEIVIMAIKKDMIKEILREPSPDPAP
Ga0268264_116204202	3300028381	Switchgrass Rhizosphere	MRVDGQFQISLEYGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP
Ga0307295_101421673	3300028708	Soil	SHPPMIGHMRVDGQFQISLERDGMRRATALPLTARDITQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDRAPRAVPESP
Ga0307295_102072481	3300028708	Soil	RVMNGNGTRHDIPNQPTMIAGKRADGQFQISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP
Ga0307322_100934431	3300028710	Soil	GSGSHWVGAVGRPHIANHPPMIGHMRVDGQFQISLERGGMRRVTALPLTARDIAQLALAAAVRNVGMTQLLTEIVTTAIKKGMIEEILRPDGKLAAALT
Ga0307293_101969311	3300028711	Soil	RVDGQFQISFERGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVTTAIKKGMIEEILREPSPDPAPQAVPDSP
Ga0307285_100723631	3300028712	Soil	QISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP
Ga0307285_101114592	3300028712	Soil	QISLESGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVITAIKKDMLKEILREPCPDPAPQAVPESP
Ga0307313_100954451	3300028715	Soil	LNGNASHPPMIGNMRVDGQFQISLEYGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVITAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307311_100927181	3300028716	Soil	GHPHIANHPPMIGHMRVDGQFQISLERGGMRRVTALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307307_100973323	3300028718	Soil	EYGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVITAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307318_103422163	3300028744	Soil	GQFQISLERDGMRRATALPLTARDITQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDRAPRAVPESP
Ga0307316_100708152	3300028755	Soil	MIGHMRVDGQFQISLERGGMRSATALPLTARDVAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP
Ga0307280_100649663	3300028768	Soil	SHWVGAVGRPHIANHPPMIGHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307280_102675551	3300028768	Soil	NHPPMIGDMRVDGQFQICLERGGMRRVTALPLTARDIAQLALAAAVRNVGMTQLLTEIVITAIKKDMIEEILRPDGKLAAALT
Ga0307323_101724111	3300028787	Soil	SRVMSGNGTGHDIPNHPPMIGHMRVDGQFQISFERGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVTTAIKKGMIEEILREPSPDPAPQAVPDSP
Ga0307323_103407762	3300028787	Soil	GSGSHWVGAVGRPHIPNHPPMIGHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP
Ga0307290_102112772	3300028791	Soil	GHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEIVITAIQKDMIEEILRPDGKLAAALT
Ga0307299_100257121	3300028793	Soil	GTRHDIPNHPPMIGHMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307287_101238541	3300028796	Soil	FQISLECGGRRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP
Ga0307294_101955121	3300028810	Soil	ISLEYGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVITAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307292_101278394	3300028811	Soil	VGRTHIASHPPMIGHMRVDGQFQISLERDGMRRATALPLTARDITQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDRAPRAVPESP
Ga0307292_103739491	3300028811	Soil	VLNGNASDSRVMSGNGTGHDIPNHPPMIGHMRVDGQFQISFERGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVTTAIKKGMIEEILREPSPDPAPQAVPDSP
Ga0307302_103121493	3300028814	Soil	LERDGMRRATALPLTARDITQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDRAPRAVPESP
Ga0307296_101508512	3300028819	Soil	VLNGNASDSRVMSGNGTGHDIPNHPPMIGHMRVDGQFQISFERGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVITAIKKDMIEEILREPSPDPAPQAAPERP
Ga0307310_103590811	3300028824	Soil	RGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVITAIKKDMIEEILREPSPDPAPQAAPERP
Ga0307310_105817892	3300028824	Soil	QYSNGSGSHRVGAVGRPHTANHPPMIGDMRVDGQFQICLERGGMRRVTALPLTARDIAQLALAAAVRNVGMTQLLTEIVITAIQKDMIEEILRPDGKLAAALT
Ga0307312_104031313	3300028828	Soil	PPMIGHMRVDGQFQISLERGGMRRATALPLTARDIAQLALAAAVRNVGMTQLLTEIVTTAIKKGMIEEILRPDGKLAAALT
Ga0307312_105537451	3300028828	Soil	TRHDIPNHPPMIGHMRVDGQFQISLERGGMRCATALPLTDRDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILRKPSPDPVPQAVPESP
Ga0307312_110006371	3300028828	Soil	CNGSHLRVMNGNGTRHDIPNDPTMIARNRANGQFQISLECGGMRRATALPLTDRDIAQLALEAAVRNVGMTQLLTEIVIAAIKKDMLKEILREPCPDPAPQAVPESP
Ga0307278_102941222	3300028878	Soil	MIGHMRVDGQFQISLERGGMRSATALPLTARDVAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPQAVPESP
Ga0307308_101363951	3300028884	Soil	YCNGSGSHWVGAVGRPHIANHPPMIGHMRVDGQFQISLERGGMRSATALPLTARDVAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILREPSPDPAPRAVPESP
Ga0307308_106196962	3300028884	Soil	VLNGNASDLRVMSGNGTGHDIPNHPPMIGHMRVDGQFQISFERGGTRRATALPLTAHDIAQLALAAAARNVGMTQLLTEIVITAIKKDMIEEILRPDGKLAAALT
Ga0307304_104671361	3300028885	Soil	VLNGNASDVMSGNGTGHDIPNHPPMIGHMRVDGQFQISFERGGTRRATALPLTDRDIAQLALAAAARNVGMTQLLTEIVITAIKKDMIEEILREPSPDPAPQAAPERP
Ga0308198_10716401	3300030904	Soil	IANHPPMIGHMRVDGQFQISLERGGMRHATALPLTAVAITQLALAAAVRNVGMTQLLTEIVTTAIKKGMIEEILRPDGKLAAALT
Ga0308154_1101341	3300030986	Soil	SLQVTCSRLGISLRRQHVLNGNASHSRVMSGNGTRHDIPNDPTMIARNRANGQFQISLECGGMRRATALPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILRPDGKLAAVLT
Ga0308193_10329182	3300031096	Soil	GISLRTRQYSNGSGSHWVGAVGRPHIANHPPMIGHMRVDGQFQISLERGGMRRATALPLTAHDIAQLALAAAVRNVGMTQLLTEIVITAIKKDMIEEILRPDGKLAAALT
Ga0308181_11845352	3300031099	Soil	MIGHMRVDGQFQISLERGGMRRVTALPLTAGDIAQLALAAAVRNVGMTQLLTEIVTTAIKKGMIEEILRPDGKLAAALT
Ga0307498_100051644	3300031170	Soil	RVGAQLQITLERDGVRRATALPLTARDIAQLALEAAVRNVGMTQLLTEVVTTAIKKRMIEEILREPSPDPAPQAVPESPKAQFSRVPDEP
Ga0307468_1011737151	3300031740	Hardwood Forest Soil	RGGMRRATALPLTAHDIAQLAIAAAARNVGMTQLLTEVVTMAIKKGMVEEILREPSSDPAPQPVPESP
Ga0310907_104636632	3300031847	Soil	QYSNGRGSHWEGAVGRPHLANHPPMIGHMRVDAQFQISFERGGERHATAVPLTARDIAQLALAAAVRNVGMTQLLTEVVTTAIQKDMIEEILREPSPDLAPQAVPESP
Ga0307470_118342431	3300032174	Hardwood Forest Soil	SLERGGIRRATALPLTARDIAQLALAAAARNVGMTQLLTEVVTMAIKKGMIEEILREPSSDPAPQAVPESM
Ga0370548_055569_106_438	3300034644	Soil	MSGNGTRHDIPNHPPMIGDMRVDGQFQISLECGGMRRATALPLTAGDIAQLALAAAVRNVGMTQLLTEVVTTAIKKGMIEEILRKPSPDPWISFLSRYGRFLGHANPSLG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089170

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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